Rh5CG521500

Belongs to the peptidase M16 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Reverse (-)
73014883 .. 73050283
35401 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG521500.1

Sequence Viewer

Length: 678 bp
ATGGAGGTCTTGCCATTGGGGCTGAGGAAGTCGAGGGTGCGTTGCACCTCTCATGCTTCGTCTTCTCGGGACTGGTGTACCAGAGGCTTTGAGAAGCTTTTCATGTCTGGGATTGGAAGCAATGTGAAAAGGTTAGGTAAAGCTTTTATGAAACACACTAAATATGAATTTTCTTCAATACAAAGCACCTTTGTTTCATTTAAAGCGTTCAAAGAAAGAGCTTCTGAGGCACTGCCTAAGAGTGTGCAGATTCGGGGAAAATGTGCCTTTATTGTTGAAGCCGATCAATCTCTTGCTCCTTCTCCTTTCTGGGGAATGGCTTTAGTGCCACAAGCAACCAGAAGGAGACCAAGAGTGAAAACGAGTCCCAACATACGGTGCGCGCTCAGCAACGTTGACACTAGTCTTCTAACTTGTGCTACAATTCCATTCTATAACAGTTACTTGTCCAAGCATGGGGGCTCATCAAATGCTTACACAAAGGAAGAGCACACTTGCTACCATTTTGACGTGAAACGAGATTTTCTTAAAGGTGCCTTGAAAAGATTTTCTCAGTTTTTTGTTTCACCTCTAATGAGAAGTGAAGCCATGGAGCGAGAGAGTTTAACAGGGTTCTGCATAGCGATTTGTGGCGCCTTCAACAACTTCGAGACCATACATCCTCACCTGTCCATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0003674 GO:0003824 GO:0004175 GO:0004222 GO:0005102 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005777 GO:0005782 GO:0005829 GO:0006508 GO:0006518 GO:0006605 GO:0006625 GO:0006807 GO:0006810 GO:0006886 GO:0006996 GO:0007031 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007169 GO:0007275 GO:0007568 GO:0008104 GO:0008144 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0008270 GO:0008286 GO:0008340 GO:0009056 GO:0009057 GO:0009719 GO:0009725 GO:0009893 GO:0009894 GO:0009896 GO:0009986 GO:0009987 GO:0010033 GO:0010243 GO:0010259 GO:0010604 GO:0010815 GO:0010992 GO:0015031 GO:0015833 GO:0016043 GO:0016787 GO:0017046 GO:0017076 GO:0017144 GO:0019222 GO:0019538 GO:0019725 GO:0022607 GO:0023052 GO:0030163 GO:0030554 GO:0031334 GO:0031907 GO:0031974 GO:0032459 GO:0032461 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0032868 GO:0032869 GO:0032870 GO:0033036 GO:0033218 GO:0033365 GO:0034613 GO:0034641 GO:0035639 GO:0036094 GO:0042176 GO:0042221 GO:0042277 GO:0042562 GO:0042579 GO:0042592 GO:0042737 GO:0042802 GO:0042803 GO:0042886 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043171 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043254 GO:0043434 GO:0043559 GO:0043574 GO:0043603 GO:0043933 GO:0044085 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044422 GO:0044424 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0045732 GO:0046872 GO:0046907 GO:0046914 GO:0046983 GO:0048518 GO:0048522 GO:0048856 GO:0050435 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051259 GO:0051260 GO:0051603 GO:0051641 GO:0051649 GO:0051716 GO:0060255 GO:0065003 GO:0065007 GO:0065008 GO:0070011 GO:0070013 GO:0070727 GO:0070887 GO:0071310 GO:0071375 GO:0071417 GO:0071495 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0072662 GO:0072663 GO:0080090 GO:0097159 GO:0097242 GO:0097367 GO:0140030 GO:0140035 GO:0140036 GO:0140096 GO:1901142 GO:1901143 GO:1901265 GO:1901363 GO:1901564 GO:1901565 GO:1901575 GO:1901652 GO:1901653 GO:1901698 GO:1901699 GO:1901700 GO:1901701
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

225

Amino Acids

25.37

Weight (kDa)

9.79

Isoelectric Point (pI)

47.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_M16 PF00675 146 - 201 3.1e-12 Insulinase (Peptidase family M16)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000183)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G01440
fragaria_vesca FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40370 FvH4_3g40410 FvH4_3g40410 FvH4_3g40411 FvH4_3g40412 FvH4_3g40413 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310
rosa_chinensis RchiOBHm_Chr1g0321501 RchiOBHm_Chr1g0334011 RchiOBHm_Chr1g0334041 RchiOBHm_Chr1g0335131 RchiOBHm_Chr2g0145491 RchiOBHm_Chr3g0492731 RchiOBHm_Chr5g0072791 RchiOBHm_Chr5g0072891 RchiOBHm_Chr5g0072931 RchiOBHm_Chr5g0072951 RchiOBHm_Chr5g0073041 RchiOBHm_Chr5g0073051 RchiOBHm_Chr5g0073061 RchiOBHm_Chr5g0073071 RchiOBHm_Chr5g0074151 RchiOBHm_Chr5g0074161 RchiOBHm_Chr7g0202261
rosa_laevigata RLG00000014828 RLG00000036342 RLG00000036343 RLG00000036346 RLG00000036350 RLG00000036353 RLG00000036355 RLG00000036356
rosa_multiflora Rmu_co8227831.1_g000001 Rmu_co8517625.1_g000001 Rmu_sc0001113.1_g000013 Rmu_sc0001394.1_g000005 Rmu_sc0002548.1_g000005 Rmu_sc0003160.1_g000003 Rmu_sc0003160.1_g000023 Rmu_sc0005069.1_g000004 Rmu_sc0005069.1_g000026 Rmu_sc0005592.1_g000031 Rmu_sc0005592.1_g000032 Rmu_sc0005592.1_g000033 Rmu_sc0007034.1_g000002 Rmu_sc0008926.1_g000001 Rmu_sc0008926.1_g000005 Rmu_sc0010523.1_g000004 Rmu_sc0010523.1_g000005 Rmu_sc0010900.1_g000006 Rmu_sc0010900.1_g000008 Rmu_sc0018267.1_g000001 Rmu_sc0040908.1_g000001
rosa_roxburghii Rroxscaffold_1G00008160 Rroxscaffold_1G00008170 Rroxscaffold_1G00008240 Rroxscaffold_1G00008250 Rroxscaffold_1G00008280 Rroxscaffold_1G00008290 Rroxscaffold_1G00008310 Rroxscaffold_1G00008340 Rroxscaffold_1G00008360 Rroxscaffold_2G00147720 Rroxscaffold_3G00254700 Rroxscaffold_5G00358330
rosa_rugosa Rorug01G0030700 Rorug03G0256700 Rorug03G0282500 Rorug04G0070500 Rorug05G0104700 Rorug05G0241200 Rorug05G0414700 Rorug05G0418900 Rorug05G0420400 Rorug05G0420500 Rorug05G0420500 Rorug05G0420700 Rorug05G0420800 Rorug05G0420900 Rorug06G0037800 Rorug07G0069500 Rorug07G0069600 Rorug07G0069600
rosa_samantha Rh2DG665200 Rh3AG306000 Rh3DG242400 Rh5AG458000 Rh5AG477100 Rh5AG477200 Rh5AG477400 Rh5AG477500 Rh5AG477600 Rh5AG487100 Rh5AG501000 Rh5BG497200 Rh5BG497400 Rh5BG497600 Rh5BG497700 Rh5BG498100 Rh5BG498200 Rh5BG498300 Rh5BG498400 Rh5CG521500 Rh5DG501800 Rh5DG509300 Rh5DG510000 Rh5DG510100 Rh5DG510400 Rh5DG520000 Rh6BG100200 Rh6BG523800 Rh6CG196600 Rh7AG255600 Rh7AG267200 Rh7DG203300
rosa_wichuraiana Rw1G031050 Rw5G044330 Rw5G044340 Rw5G044360 Rw5G044370 Rw5G046550 Rw7G017220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 533, 632
AccII CGCG 1 cut(s) 383
AclI AACGTT 1 cut(s) 393
AcsI RAATTY 1 cut(s) 167
AcyI GRCGYC 1 cut(s) 633
AfaI GTAC 1 cut(s) 79
AfiI CCNNNNNNNGG 3 cut(s) 311, 375, 456
AgsI TTSAA 5 cut(s) 177, 211, 278, 541, 640
AhlI ACTAGT 1 cut(s) 401
AjiI CACGTC 1 cut(s) 511
AluBI AGCT 3 cut(s) 97, 143, 221
AluI AGCT 3 cut(s) 97, 143, 221
Alw21I GWGCWC 1 cut(s) 492
Alw26I GTCTC 2 cut(s) 340, 644
Ama87I CYCGRG 1 cut(s) 66
ApoI RAATTY 1 cut(s) 167
Asp700I GAANNNNTTC 1 cut(s) 98
AspLEI GCGC 3 cut(s) 383, 385, 635
AsuHPI GGTGA 2 cut(s) 558, 656
AvaI CYCGRG 1 cut(s) 66
BaeI ACNNNNGTAYC 2 cut(s) 61, 94
BanI GGYRCC 2 cut(s) 533, 632
BanII GRGCYC 1 cut(s) 464
BbsI GAAGAC 2 cut(s) 54, 398
Bbv12I GWGCWC 1 cut(s) 492
BbvCI CCTCAGC 1 cut(s) 23
BcoDI GTCTC 2 cut(s) 340, 644
BcuI ACTAGT 1 cut(s) 401
BfaI CTAG 1 cut(s) 402
BfoI RGCGCY 1 cut(s) 636
BglI GCCNNNNNGGC 1 cut(s) 19
BlpI GCTNAGC 1 cut(s) 386
BmeT110I CYCGRG 1 cut(s) 66
BmgBI CACGTC 1 cut(s) 511
BmiI GGNNCC 2 cut(s) 535, 634
BoxI GACNNNNGTC 1 cut(s) 402
BpiI GAAGAC 2 cut(s) 54, 398
Bpu10I CCTNAGC 1 cut(s) 23
Bpu1102I GCTNAGC 1 cut(s) 386
BsaHI GRCGYC 1 cut(s) 633
BsaI GGTCTC 2 cut(s) 340, 644
BsaJI CCNNGG 1 cut(s) 588
Bsc4I CCNNNNNNNGG 3 cut(s) 311, 375, 456
Bse1I ACTGG 1 cut(s) 77
Bse3DI GCAATG 1 cut(s) 127
BseDI CCNNGG 1 cut(s) 588
BseGI GGATG 1 cut(s) 658
BseLI CCNNNNNNNGG 3 cut(s) 311, 375, 456
BseMI GCAATG 1 cut(s) 127
BseMII CTCAG 4 cut(s) 14, 216, 400, 566
BseNI ACTGG 1 cut(s) 77
BsePI GCGCGC 1 cut(s) 381
BsgI GTGCAG 1 cut(s) 266
Bsh1236I CGCG 1 cut(s) 383
BshNI GGYRCC 2 cut(s) 533, 632
BsiHKAI GWGCWC 1 cut(s) 492
BsiHKCI CYCGRG 1 cut(s) 66
BslFI GGGAC 2 cut(s) 83, 351
BslI CCNNNNNNNGG 3 cut(s) 311, 375, 456
BsmAI GTCTC 2 cut(s) 340, 644
BsmFI GGGAC 2 cut(s) 83, 351
Bso31I GGTCTC 2 cut(s) 340, 644
BsoBI CYCGRG 1 cut(s) 66
Bsp1286I GDGCHC 2 cut(s) 464, 492
Bsp143I GATC 1 cut(s) 283
Bsp1720I GCTNAGC 1 cut(s) 386
Bsp19I CCATGG 1 cut(s) 588
BspCNI CTCAG 4 cut(s) 15, 217, 399, 565
BspFNI CGCG 1 cut(s) 383
BspLI GGNNCC 2 cut(s) 535, 634
BspQI GCTCTTC 1 cut(s) 480
BspT107I GGYRCC 2 cut(s) 533, 632
BspTNI GGTCTC 2 cut(s) 340, 644
BsrDI GCAATG 1 cut(s) 127
BsrI ACTGG 1 cut(s) 77
BssECI CCNNGG 1 cut(s) 588
BssHII GCGCGC 1 cut(s) 381
BssMI GATC 1 cut(s) 283
BssNI GRCGYC 1 cut(s) 633
BssT1I CCWWGG 1 cut(s) 588
Bst4CI ACNGT 2 cut(s) 378, 440
Bst6I CTCTTC 1 cut(s) 480
BstACI GRCGYC 1 cut(s) 633
BstC8I GCNNGC 1 cut(s) 383
BstDEI CTNAG 5 cut(s) 23, 225, 237, 386, 552
BstDSI CCRYGG 1 cut(s) 588
BstF5I GGATG 1 cut(s) 658
BstFNI CGCG 1 cut(s) 383
BstH2I RGCGCY 1 cut(s) 636
BstHHI GCGC 3 cut(s) 383, 385, 635
BstKTI GATC 1 cut(s) 286
BstMAI GTCTC 2 cut(s) 340, 644
BstMBI GATC 1 cut(s) 283
BstMWI GCNNNNNNNGC 3 cut(s) 19, 227, 387
BstPAI GACNNNNGTC 1 cut(s) 402
BstUI CGCG 1 cut(s) 383
BstV2I GAAGAC 2 cut(s) 54, 398
BtgI CCRYGG 1 cut(s) 588
BtrI CACGTC 1 cut(s) 511
BtsCI GGATG 1 cut(s) 658
BtsI GCAGTG 1 cut(s) 230
BtsIMutI CAGTG 1 cut(s) 230
Cac8I GCNNGC 1 cut(s) 383
CfoI GCGC 3 cut(s) 383, 385, 635
Csp6I GTAC 1 cut(s) 78
CviAII CATG 4 cut(s) 53, 103, 455, 589
CviJI RGCY 9 cut(s) 22, 87, 97, 143, 221, 281, 320, 462, 587
CviKI_1 RGCY 9 cut(s) 22, 87, 97, 143, 221, 281, 320, 462, 587
CviQI GTAC 1 cut(s) 78
DdeI CTNAG 5 cut(s) 23, 225, 237, 386, 552
DinI GGCGCC 1 cut(s) 634
DpnI GATC 1 cut(s) 285
DpnII GATC 1 cut(s) 283
DraI TTTAAA 1 cut(s) 202
Eam1104I CTCTTC 1 cut(s) 480
EarI CTCTTC 1 cut(s) 480
Eco130I CCWWGG 1 cut(s) 588
Eco24I GRGCYC 1 cut(s) 464
Eco31I GGTCTC 2 cut(s) 340, 644
Eco88I CYCGRG 1 cut(s) 66
EcoT14I CCWWGG 1 cut(s) 588
EcoT38I GRGCYC 1 cut(s) 464
EgeI GGCGCC 1 cut(s) 634
EheI GGCGCC 1 cut(s) 634
ErhI CCWWGG 1 cut(s) 588
FaeI CATG 4 cut(s) 56, 106, 458, 592
FaqI GGGAC 2 cut(s) 83, 351
FatI CATG 4 cut(s) 52, 102, 454, 588
FokI GGATG 1 cut(s) 645
FriOI GRGCYC 1 cut(s) 464
FspBI CTAG 1 cut(s) 402
GlaI GCGC 3 cut(s) 382, 384, 634
HaeII RGCGCY 1 cut(s) 636
HhaI GCGC 3 cut(s) 383, 385, 635
Hin1I GRCGYC 1 cut(s) 633
Hin1II CATG 4 cut(s) 56, 106, 458, 592
Hin6I GCGC 3 cut(s) 381, 383, 633
HinP1I GCGC 3 cut(s) 381, 383, 633
HincII GTYRAC 1 cut(s) 397
HindII GTYRAC 1 cut(s) 397
HindIII AAGCTT 2 cut(s) 95, 141
HinfI GANTC 2 cut(s) 250, 364
HphI GGTGA 2 cut(s) 558, 656
Hpy166II GTNNAC 2 cut(s) 78, 397
Hpy188I TCNGA 1 cut(s) 226
Hpy188III TCNNGA 2 cut(s) 68, 649
Hpy8I GTNNAC 2 cut(s) 78, 397
HpyAV CCTTC 3 cut(s) 309, 336, 646
HpyCH4III ACNGT 2 cut(s) 378, 440
HpyCH4IV ACGT 2 cut(s) 393, 510
HpyCH4V TGCA 3 cut(s) 45, 247, 618
HpyF10VI GCNNNNNNNGC 3 cut(s) 19, 227, 387
HpyF3I CTNAG 5 cut(s) 23, 225, 237, 386, 552
HpySE526I ACGT 2 cut(s) 393, 510
Hsp92I GRCGYC 1 cut(s) 633
Hsp92II CATG 4 cut(s) 56, 106, 458, 592
HspAI GCGC 3 cut(s) 381, 383, 633
KasI GGCGCC 1 cut(s) 632
Kzo9I GATC 1 cut(s) 283
LguI GCTCTTC 1 cut(s) 480
LmnI GCTCC 2 cut(s) 301, 592
LpnPI CCDG 6 cut(s) 58, 93, 94, 295, 352, 594
MaeI CTAG 1 cut(s) 402
MaeII ACGT 2 cut(s) 393, 510
MaeIII GTNAC 1 cut(s) 440
MalI GATC 1 cut(s) 285
MboI GATC 1 cut(s) 283
MboII GAAGA 4 cut(s) 54, 165, 398, 497
MhlI GDGCHC 2 cut(s) 464, 492
MluCI AATT 2 cut(s) 167, 423
Mly113I GGCGCC 1 cut(s) 633
MlyI GAGTC 1 cut(s) 373
MnlI CCTC 7 cut(s) 18, 27, 58, 77, 220, 579, 672
MroXI GAANNNNTTC 1 cut(s) 98
MseI TTAA 3 cut(s) 201, 528, 605
MvnI CGCG 1 cut(s) 383
MwoI GCNNNNNNNGC 3 cut(s) 19, 227, 387
NarI GGCGCC 1 cut(s) 633
NcoI CCATGG 1 cut(s) 588
NdeII GATC 1 cut(s) 283
NlaIII CATG 4 cut(s) 56, 106, 458, 592
NlaIV GGNNCC 2 cut(s) 535, 634
PauI GCGCGC 1 cut(s) 381
PciSI GCTCTTC 1 cut(s) 480
PdmI GAANNNNTTC 1 cut(s) 98
PfeI GAWTC 1 cut(s) 250
PleI GAGTC 1 cut(s) 372
PluTI GGCGCC 1 cut(s) 636
PpsI GAGTC 1 cut(s) 372
PshAI GACNNNNGTC 1 cut(s) 402
Psp1406I AACGTT 1 cut(s) 393
PspN4I GGNNCC 2 cut(s) 535, 634
PteI GCGCGC 1 cut(s) 381
RsaI GTAC 1 cut(s) 79
RsaNI GTAC 1 cut(s) 78
SapI GCTCTTC 1 cut(s) 480
SaqAI TTAA 3 cut(s) 201, 528, 605
Sau3AI GATC 1 cut(s) 283
SchI GAGTC 1 cut(s) 373
SduI GDGCHC 2 cut(s) 464, 492
SfoI GGCGCC 1 cut(s) 634
SpeI ACTAGT 1 cut(s) 401
Sse9I AATT 2 cut(s) 167, 423
SspDI GGCGCC 1 cut(s) 632
SspMI CTAG 1 cut(s) 402
StyI CCWWGG 1 cut(s) 588
TaaI ACNGT 2 cut(s) 378, 440
TaiI ACGT 2 cut(s) 396, 513
TaqI TCGA 2 cut(s) 32, 648
TasI AATT 2 cut(s) 167, 423
TfiI GAWTC 1 cut(s) 250
Tru1I TTAA 3 cut(s) 201, 528, 605
Tru9I TTAA 3 cut(s) 201, 528, 605
TscAI CASTG 1 cut(s) 237
TspDTI ATGAA 4 cut(s) 91, 164, 180, 186
TspRI CASTG 1 cut(s) 237
XapI RAATTY 1 cut(s) 167
XmnI GAANNNNTTC 1 cut(s) 98
XspI CTAG 1 cut(s) 402
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.