Rmu_sc0008926.1_g000005

Belongs to the peptidase M16 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008926.1
OG0000183
Physical Location & Seq
Forward (+)
16397 .. 25644
9248 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008926.1_g000005.1.cds

Sequence Viewer

Length: 2844 bp
atgggtcgctgcactttctcctcggacgatattgtaataaagtctccgaatgataagaaattgtacagactaattgagcttgagaatggcctcactgcattgctcattcatgatcctgagatttacccacaagggcccaaaagccttgaacccagtgaagaagatgaagcagccaaaggtggagatggtgcctctgagactaagacggcagcagcagcaatgtgcgttggaataggcagcatgtctgaccctgttgaggcacaagggcttgcacacttcctagaatctcttgatgtacttgaggagtggattttagaactgtatggagatgttaaaagtggcccccaagtaaatctggagttcaaggcagaaggtcctatatggaaatctggaaaactttacaggctagaggctgttgacaatgttcatatactccacttagcatggacacttccatgtcttcatcgacactatttgaaaagcccaacatattatttacgtcatctccttgagcatgagggcaggggaagtttgtatttccacctcaaagctagaggttgggcaacatttgtaagtgctccagtggaacactattctgtggctgatgtcttctgcatgatcatatacctcactgactctggattggagaagattttcgatataattgggttggtgtatcaatacattaagttcttacggcaagtgttgccccaagaatggatatttcgtgaactccaggatattgggaacatctaccttaagtttttagaggagcagccccaggattattatgctttaagacttggaggaaatttactacattatcccgcagagcatgctatttatggggattatttgctagagaattgggatgagaaattgatagaatatactctaggtttcttgagaccagaaaacatgaggattgatgtgatatctaagtcctccacgttgtcagaagatttccagtgcgagccttggtttgggtcacattttaccgaggaagatatatctccgtctttgatagatttatggaaggatcctcaagaaattgatagttcattgcatctcccagaaaagaatgaattcattccctctgatttttccatccgttctgatgttcttgataccgcaaatacatcttgtcctagatgtatacttgatgggccattggtgaagttatggtacaagcttgatagtacttacaaacttccgcaggcaaacatatactttcgcgtcagtctaaaggaagcatctggtagtgtgaaaagttctgtcttgactcaactatatggcgaccttctttgggatgagctgaatgaggttgtatatcaggctagtgtcgcccagctgggaacttctgtatctgtgtacactaactatctggagctgaaggtcagcggtttcaatgataagattccaactctcttgtcaaaaattatgacaacagccaaaaatttctcgccaacttacgaatgtttcaaggttattaaagaggacatggagcgagcatataagaacaccaatatggatccttggagccactcgacatacttgagagatgaagttttgtaccaaaatttctgtgatgtagatgagacgttgcatgttttaaatggattgactgtttctgatgtgaagtcattcattcccgagctttggtccccgcattacattgaaggcctttgccatggaaatctgttagaagaagaagcaatcagccttttaaatatagtgaagacaaatttttctgtgcaaccacatcctatcgaactgaagcataaaaataactgtatttgtcttcctcctgatgctaacgtcattagagatgtcagagtgaagaataagtctcaaacaaactctgttatcgagctgtattttcaaattgagtgggcagtggggattgagtccaccagattgagagcattgatagatctattttgtgaaattgtaaacgaaccactttacaatcagctaaggacgaaggagcagctgggatatgttgttcaatgtaactggaatgtaacactcggtgtttttggcttttattttaaagttcagtcgtctgattataatccaatctacttacaaagaagagttgacaactttgtcaatggtgtggaagtgcttttgctaggattggatgatgaatcctttgagaattaccaaggtgggttaatagcgaagctattggagaaagattcaacccttatggatgaaactgctcgatattgggatcatattatctgcaaaaggtataagtttgacaaatgggaaaagatagcagaagaactcagatgtctacagaagggggatgttatcaacttttacaagacttacttgcaactatcatctcccaagcgtcggagacttgtaactcgtgtttggggttgcaacactgacatgaaagaagctgaagaagcgcgaacggagtctgagcaaatcattgaagaccttgcagcctttaagaggtcatctcagttctatggtcatggaagttgtcagacagttgctcctccgattatgttgccacaagcaaccagaaggagaccaagagtgaaaacgagtcccaacatacggtgcgctctcagcaacgttgacactagtcttctaacttgtgctacaattccattcacggttgaaggaaggcaactgttgccggacggtagggtgcctttggcgacgtcgcgtcgtttgcggccgcggagttggtcgtggttgaagaaggtggtttgggcttggcctggtcctcgggatcgaggtcggggtcgggtgggtccggtcaccgtacacgtcgttgttgattccaacggagtcctagggttgatccattttgagggataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0003674 GO:0003824 GO:0004175 GO:0004222 GO:0005102 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005777 GO:0005782 GO:0005829 GO:0006508 GO:0006518 GO:0006605 GO:0006625 GO:0006807 GO:0006810 GO:0006886 GO:0006996 GO:0007031 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007169 GO:0007275 GO:0007568 GO:0008104 GO:0008144 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0008270 GO:0008286 GO:0008340 GO:0009056 GO:0009057 GO:0009719 GO:0009725 GO:0009893 GO:0009894 GO:0009896 GO:0009986 GO:0009987 GO:0010033 GO:0010243 GO:0010259 GO:0010604 GO:0010815 GO:0010992 GO:0015031 GO:0015833 GO:0016043 GO:0016787 GO:0017046 GO:0017076 GO:0017144 GO:0019222 GO:0019538 GO:0019725 GO:0022607 GO:0023052 GO:0030163 GO:0030554 GO:0031334 GO:0031907 GO:0031974 GO:0032459 GO:0032461 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0032868 GO:0032869 GO:0032870 GO:0033036 GO:0033218 GO:0033365 GO:0034613 GO:0034641 GO:0035639 GO:0036094 GO:0042176 GO:0042221 GO:0042277 GO:0042562 GO:0042579 GO:0042592 GO:0042737 GO:0042802 GO:0042803 GO:0042886 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043171 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043254 GO:0043434 GO:0043559 GO:0043574 GO:0043603 GO:0043933 GO:0044085 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044422 GO:0044424 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0045732 GO:0046872 GO:0046907 GO:0046914 GO:0046983 GO:0048518 GO:0048522 GO:0048856 GO:0050435 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051259 GO:0051260 GO:0051603 GO:0051641 GO:0051649 GO:0051716 GO:0060255 GO:0065003 GO:0065007 GO:0065008 GO:0070011 GO:0070013 GO:0070727 GO:0070887 GO:0071310 GO:0071375 GO:0071417 GO:0071495 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0072662 GO:0072663 GO:0080090 GO:0097159 GO:0097242 GO:0097367 GO:0140030 GO:0140035 GO:0140036 GO:0140096 GO:1901142 GO:1901143 GO:1901265 GO:1901363 GO:1901564 GO:1901565 GO:1901575 GO:1901652 GO:1901653 GO:1901698 GO:1901699 GO:1901700 GO:1901701
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_M16 Peptidase_M16_C Peptidase_M16_M

Protein Analysis

947

Amino Acids

108.49

Weight (kDa)

5.46

Isoelectric Point (pI)

45.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000183)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G01440
fragaria_vesca FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40370 FvH4_3g40410 FvH4_3g40410 FvH4_3g40411 FvH4_3g40412 FvH4_3g40413 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310
rosa_chinensis RchiOBHm_Chr1g0321501 RchiOBHm_Chr1g0334011 RchiOBHm_Chr1g0334041 RchiOBHm_Chr1g0335131 RchiOBHm_Chr2g0145491 RchiOBHm_Chr3g0492731 RchiOBHm_Chr5g0072791 RchiOBHm_Chr5g0072891 RchiOBHm_Chr5g0072931 RchiOBHm_Chr5g0072951 RchiOBHm_Chr5g0073041 RchiOBHm_Chr5g0073051 RchiOBHm_Chr5g0073061 RchiOBHm_Chr5g0073071 RchiOBHm_Chr5g0074151 RchiOBHm_Chr5g0074161 RchiOBHm_Chr7g0202261
rosa_laevigata RLG00000014828 RLG00000036342 RLG00000036343 RLG00000036346 RLG00000036350 RLG00000036353 RLG00000036355 RLG00000036356
rosa_multiflora Rmu_co8227831.1_g000001 Rmu_co8517625.1_g000001 Rmu_sc0001113.1_g000013 Rmu_sc0001394.1_g000005 Rmu_sc0002548.1_g000005 Rmu_sc0003160.1_g000003 Rmu_sc0003160.1_g000023 Rmu_sc0005069.1_g000004 Rmu_sc0005069.1_g000026 Rmu_sc0005592.1_g000031 Rmu_sc0005592.1_g000032 Rmu_sc0005592.1_g000033 Rmu_sc0007034.1_g000002 Rmu_sc0008926.1_g000001 Rmu_sc0008926.1_g000005 Rmu_sc0010523.1_g000004 Rmu_sc0010523.1_g000005 Rmu_sc0010900.1_g000006 Rmu_sc0010900.1_g000008 Rmu_sc0018267.1_g000001 Rmu_sc0040908.1_g000001
rosa_roxburghii Rroxscaffold_1G00008160 Rroxscaffold_1G00008170 Rroxscaffold_1G00008240 Rroxscaffold_1G00008250 Rroxscaffold_1G00008280 Rroxscaffold_1G00008290 Rroxscaffold_1G00008310 Rroxscaffold_1G00008340 Rroxscaffold_1G00008360 Rroxscaffold_2G00147720 Rroxscaffold_3G00254700 Rroxscaffold_5G00358330
rosa_rugosa Rorug01G0030700 Rorug03G0256700 Rorug03G0282500 Rorug04G0070500 Rorug05G0104700 Rorug05G0241200 Rorug05G0414700 Rorug05G0418900 Rorug05G0420400 Rorug05G0420500 Rorug05G0420500 Rorug05G0420700 Rorug05G0420800 Rorug05G0420900 Rorug06G0037800 Rorug07G0069500 Rorug07G0069600 Rorug07G0069600
rosa_samantha Rh2DG665200 Rh3AG306000 Rh3DG242400 Rh5AG458000 Rh5AG477100 Rh5AG477200 Rh5AG477400 Rh5AG477500 Rh5AG477600 Rh5AG487100 Rh5AG501000 Rh5BG497200 Rh5BG497400 Rh5BG497600 Rh5BG497700 Rh5BG498100 Rh5BG498200 Rh5BG498300 Rh5BG498400 Rh5CG521500 Rh5DG501800 Rh5DG509300 Rh5DG510000 Rh5DG510100 Rh5DG510400 Rh5DG520000 Rh6BG100200 Rh6BG523800 Rh6CG196600 Rh7AG255600 Rh7AG267200 Rh7DG203300
rosa_wichuraiana Rw1G031050 Rw5G044330 Rw5G044340 Rw5G044360 Rw5G044370 Rw5G046550 Rw7G017220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2073
AasI GACNNNNNNGTC 1 cut(s) 2108
AatII GACGTC 1 cut(s) 2687
AccB1I GGYRCC 2 cut(s) 188, 2671
AccI GTMKAC 2 cut(s) 1156, 2302
AccII CGCG 4 cut(s) 1236, 2425, 2689, 2704
AciI CCGC 8 cut(s) 828, 1131, 1214, 1401, 1667, 2698, 2702, 2704
AclI AACGTT 1 cut(s) 2595
AclWI GGATC 8 cut(s) 107, 1034, 1047, 1526, 1539, 2244, 2763, 2821
AcoI YGGCCR 1 cut(s) 2699
AcsI RAATTY 5 cut(s) 811, 1085, 1456, 1579, 1744
AcuI CTGAAG 3 cut(s) 1412, 1796, 2436
AcyI GRCGYC 1 cut(s) 2684
AdeI CACNNNGTG 1 cut(s) 2033
AfaI GTAC 7 cut(s) 65, 297, 1187, 1201, 1373, 1574, 2790
AfiI CCNNNNNNNGG 9 cut(s) 256, 717, 983, 1306, 1659, 2364, 2469, 2577, 2836
AflII CTTAAG 1 cut(s) 758
AflIII ACRYGT 1 cut(s) 2791
AhdI GACNNNNNGTC 1 cut(s) 2688
AhlI ACTAGT 1 cut(s) 2603
AjiI CACGTC 1 cut(s) 2794
AjnI CCWGG 3 cut(s) 735, 780, 2743
AloI GAACNNNNNNTCC 2 cut(s) 1989, 2021
Alw21I GWGCWC 1 cut(s) 580
Alw26I GTCTC 7 cut(s) 48, 191, 901, 1592, 1854, 2362, 2542
AlwI GGATC 8 cut(s) 107, 1034, 1047, 1526, 1539, 2244, 2763, 2821
Ama87I CYCGRG 2 cut(s) 1652, 2751
AoxI GGCC 7 cut(s) 88, 134, 340, 1166, 1681, 2699, 2741
ApaI GGGCCC 1 cut(s) 138
ApeKI GCWGC 9 cut(s) 9, 170, 209, 212, 215, 237, 775, 1990, 2459
ApoI RAATTY 5 cut(s) 811, 1085, 1456, 1579, 1744
Asp700I GAANNNNTTC 4 cut(s) 653, 1085, 1089, 1643
AspA2I CCTAGG 1 cut(s) 2818
AspLEI GCGC 2 cut(s) 2425, 2585
AspS9I GGNCC 8 cut(s) 134, 135, 341, 374, 1166, 1662, 2747, 2777
AsuHPI GGTGA 2 cut(s) 1186, 2776
AvaI CYCGRG 2 cut(s) 1652, 2751
AvaII GGWCC 4 cut(s) 374, 1662, 2747, 2777
AvrII CCTAGG 1 cut(s) 2818
BaeGI GKGCMC 1 cut(s) 138
BaeI ACNNNNGTAYC 2 cut(s) 1347, 1380
BamHI GGATCC 2 cut(s) 1039, 1531
BanI GGYRCC 2 cut(s) 188, 2671
BanII GRGCYC 1 cut(s) 138
BarI GAAGNNNNNNTAC 2 cut(s) 1169, 1201
BauI CACGAG 1 cut(s) 2379
BbsI GAAGAC 6 cut(s) 452, 601, 1745, 1793, 2457, 2600
Bbv12I GWGCWC 1 cut(s) 580
BbvI GCAGC 8 cut(s) 182, 221, 224, 227, 249, 787, 2002, 2471
BccI CCATC 3 cut(s) 179, 1115, 1157
BceAI ACGGC 2 cut(s) 222, 713
BcgI CGANNNNNNTGC 2 cut(s) 2509, 2543
BciT130I CCWGG 3 cut(s) 737, 782, 2745
BclI TGATCA 1 cut(s) 618
BcoDI GTCTC 7 cut(s) 48, 191, 901, 1592, 1854, 2362, 2542
BcuI ACTAGT 1 cut(s) 2603
BfmI CTRYAG 1 cut(s) 2303
BfrI CTTAAG 1 cut(s) 758
BglII AGATCT 1 cut(s) 1933
BlnI CCTAGG 1 cut(s) 2818
BmcAI AGTACT 1 cut(s) 1201
Bme1390I CCNGG 3 cut(s) 737, 782, 2745
Bme18I GGWCC 4 cut(s) 374, 1662, 2747, 2777
BmeRI GACNNNNNGTC 1 cut(s) 2688
BmeT110I CYCGRG 2 cut(s) 1652, 2751
BmgBI CACGTC 1 cut(s) 2794
BmgT120I GGNCC 8 cut(s) 134, 135, 341, 374, 1166, 1662, 2747, 2777
BmiI GGNNCC 9 cut(s) 136, 190, 343, 1041, 1533, 1541, 1664, 2673, 2778
BmrFI CCNGG 3 cut(s) 737, 782, 2745
BmrI ACTGGG 1 cut(s) 147
BmsI GCATC 3 cut(s) 1075, 1262, 1801
BmuI ACTGGG 1 cut(s) 147
BoxI GACNNNNGTC 1 cut(s) 2604
BpiI GAAGAC 6 cut(s) 452, 601, 1745, 1793, 2457, 2600
BplI GAGNNNNNCTC 2 cut(s) 2461, 2493
BpmI CTGGAG 4 cut(s) 377, 564, 719, 1406
Bpu10I CCTNAGC 1 cut(s) 1976
BpuEI CTTGAG 6 cut(s) 101, 320, 530, 925, 1029, 1576
BsaBI GATNNNNATC 1 cut(s) 2073
BsaHI GRCGYC 1 cut(s) 2684
BsaI GGTCTC 2 cut(s) 901, 2542
BsaWI WCCGGW 1 cut(s) 2779
BsaXI ACNNNNNCTCC 4 cut(s) 489, 519, 2497, 2527
Bsc4I CCNNNNNNNGG 9 cut(s) 256, 717, 983, 1306, 1659, 2364, 2469, 2577, 2836
Bse1I ACTGG 4 cut(s) 153, 581, 967, 2021
Bse3DI GCAATG 3 cut(s) 98, 225, 1061
Bse8I GATNNNNATC 1 cut(s) 2073
BseBI CCWGG 3 cut(s) 737, 782, 2745
BseGI GGATG 7 cut(s) 877, 1107, 1315, 1762, 2149, 2221, 2320
BseJI GATNNNNATC 1 cut(s) 2073
BseLI CCNNNNNNNGG 9 cut(s) 256, 717, 983, 1306, 1659, 2364, 2469, 2577, 2836
BseMI GCAATG 3 cut(s) 98, 225, 1061
BseMII CTCAG 6 cut(s) 108, 186, 2308, 2427, 2492, 2602
BseNI ACTGG 4 cut(s) 153, 581, 967, 2021
BseRI GAGGAG 4 cut(s) 10, 317, 785, 2505
BseSI GKGCMC 1 cut(s) 138
BseX3I CGGCCG 1 cut(s) 2699
BseXI GCAGC 8 cut(s) 182, 221, 224, 227, 249, 787, 2002, 2471
BseYI CCCAGC 3 cut(s) 1347, 1351, 1993
Bsh1236I CGCG 4 cut(s) 1236, 2425, 2689, 2704
Bsh1285I CGRYCG 1 cut(s) 2702
BshFI GGCC 7 cut(s) 90, 136, 342, 1168, 1683, 2701, 2743
BshNI GGYRCC 2 cut(s) 188, 2671
BsiEI CGRYCG 1 cut(s) 2702
BsiHKAI GWGCWC 1 cut(s) 580
BsiHKCI CYCGRG 2 cut(s) 1652, 2751
BsiSI CCGG 2 cut(s) 2660, 2780
BslFI GGGAC 2 cut(s) 1648, 2553
BslI CCNNNNNNNGG 9 cut(s) 256, 717, 983, 1306, 1659, 2364, 2469, 2577, 2836
BsmAI GTCTC 7 cut(s) 48, 191, 901, 1592, 1854, 2362, 2542
BsmBI CGTCTC 1 cut(s) 1592
BsmFI GGGAC 2 cut(s) 1648, 2553
BsnI GGCC 7 cut(s) 90, 136, 342, 1168, 1683, 2701, 2743
Bso31I GGTCTC 2 cut(s) 901, 2542
BsoBI CYCGRG 2 cut(s) 1652, 2751
Bsp120I GGGCCC 1 cut(s) 134
Bsp1286I GDGCHC 2 cut(s) 138, 580
Bsp1407I TGTACA 2 cut(s) 63, 1371
Bsp143I GATC 8 cut(s) 112, 618, 1039, 1531, 1933, 2236, 2755, 2826
Bsp19I CCATGG 1 cut(s) 1690
BspACI CCGC 8 cut(s) 828, 1131, 1214, 1401, 1667, 2698, 2702, 2704
BspANI GGCC 7 cut(s) 90, 136, 342, 1168, 1683, 2701, 2743
BspCNI CTCAG 6 cut(s) 109, 187, 2307, 2428, 2491, 2601
BspFNI CGCG 4 cut(s) 1236, 2425, 2689, 2704
BspHI TCATGA 1 cut(s) 109
BspLI GGNNCC 9 cut(s) 136, 190, 343, 1041, 1533, 1541, 1664, 2673, 2778
BspPI GGATC 8 cut(s) 107, 1034, 1047, 1526, 1539, 2244, 2763, 2821
BspT107I GGYRCC 2 cut(s) 188, 2671
BspTI CTTAAG 1 cut(s) 758
BspTNI GGTCTC 2 cut(s) 901, 2542
BsrDI GCAATG 3 cut(s) 98, 225, 1061
BsrGI TGTACA 2 cut(s) 63, 1371
BsrI ACTGG 4 cut(s) 153, 581, 967, 2021
BssMI GATC 8 cut(s) 112, 618, 1039, 1531, 1933, 2236, 2755, 2826
BssNAI GTATAC 1 cut(s) 1157
BssNI GRCGYC 1 cut(s) 2684
BssSI CACGAG 1 cut(s) 2379
BssT1I CCWWGG 5 cut(s) 977, 1535, 1690, 2167, 2818
Bst1107I GTATAC 1 cut(s) 1157
Bst2BI CACGAG 1 cut(s) 2379
Bst2UI CCWGG 3 cut(s) 737, 782, 2745
Bst4CI ACNGT 9 cut(s) 321, 1627, 1793, 2509, 2580, 2638, 2655, 2666, 2788
Bst6I CTCTTC 1 cut(s) 2089
BstACI GRCGYC 1 cut(s) 2684
BstAFI CTTAAG 1 cut(s) 758
BstAPI GCANNNNNTGC 3 cut(s) 706, 836, 2656
BstAUI TGTACA 2 cut(s) 63, 1371
BstC8I GCNNGC 5 cut(s) 270, 837, 974, 1218, 1509
BstDSI CCRYGG 2 cut(s) 1690, 2702
BstEII GGTNACC 1 cut(s) 2782
BstENI CCTNNNNNAGG 1 cut(s) 2467
BstF5I GGATG 7 cut(s) 877, 1107, 1315, 1762, 2149, 2221, 2320
BstFNI CGCG 4 cut(s) 1236, 2425, 2689, 2704
BstHHI GCGC 2 cut(s) 2425, 2585
BstKTI GATC 8 cut(s) 115, 621, 1042, 1534, 1936, 2239, 2758, 2829
BstMAI GTCTC 7 cut(s) 48, 191, 901, 1592, 1854, 2362, 2542
BstMBI GATC 8 cut(s) 112, 618, 1039, 1531, 1933, 2236, 2755, 2826
BstMCI CGRYCG 1 cut(s) 2702
BstMWI GCNNNNNNNGC 8 cut(s) 215, 706, 836, 1343, 2420, 2589, 2656, 2695
BstNI CCWGG 3 cut(s) 737, 782, 2745
BstNSI RCATGY 3 cut(s) 244, 839, 1610
BstPAI GACNNNNGTC 1 cut(s) 2604
BstPI GGTNACC 1 cut(s) 2782
BstSCI CCNGG 3 cut(s) 735, 780, 2743
BstSFI CTRYAG 1 cut(s) 2303
BstSLI GKGCMC 1 cut(s) 138
BstUI CGCG 4 cut(s) 1236, 2425, 2689, 2704
BstV1I GCAGC 8 cut(s) 182, 221, 224, 227, 249, 787, 2002, 2471
BstV2I GAAGAC 6 cut(s) 452, 601, 1745, 1793, 2457, 2600
BstX2I RGATCY 3 cut(s) 1039, 1531, 1933
BstXI CCANNNNNNTGG 1 cut(s) 743
BstYI RGATCY 3 cut(s) 1039, 1531, 1933
BstZ17I GTATAC 1 cut(s) 1157
BstZI CGGCCG 1 cut(s) 2699
BsuRI GGCC 7 cut(s) 90, 136, 342, 1168, 1683, 2701, 2743
BtgI CCRYGG 2 cut(s) 1690, 2702
BtrI CACGTC 1 cut(s) 2794
BtsCI GGATG 7 cut(s) 877, 1107, 1315, 1762, 2149, 2221, 2320
BtsI GCAGTG 2 cut(s) 93, 1902
BtsIMutI CAGTG 7 cut(s) 93, 160, 588, 630, 974, 1902, 2397
Cac8I GCNNGC 5 cut(s) 270, 837, 974, 1218, 1509
CciI TCATGA 1 cut(s) 109
CciNI GCGGCCGC 1 cut(s) 2699
CfoI GCGC 2 cut(s) 2425, 2585
Cfr13I GGNCC 8 cut(s) 134, 135, 341, 374, 1166, 1662, 2747, 2777
Cfr42I CCGCGG 1 cut(s) 2705
CseI GACGC 3 cut(s) 1225, 2351, 2678
Csp6I GTAC 7 cut(s) 64, 296, 1186, 1200, 1372, 1573, 2789
CspCI CAANNNNNGTGG 2 cut(s) 1871, 1906
CviQI GTAC 7 cut(s) 64, 296, 1186, 1200, 1372, 1573, 2789
DpnI GATC 8 cut(s) 114, 620, 1041, 1533, 1935, 2238, 2757, 2828
DpnII GATC 8 cut(s) 112, 618, 1039, 1531, 1933, 2236, 2755, 2826
DraI TTTAAA 3 cut(s) 1614, 1728, 2053
DraIII CACNNNGTG 1 cut(s) 2033
DrdI GACNNNNNNGTC 1 cut(s) 2108
DriI GACNNNNNGTC 1 cut(s) 2688
DseDI GACNNNNNNGTC 1 cut(s) 2108
EaeI YGGCCR 1 cut(s) 2699
EagI CGGCCG 1 cut(s) 2699
Eam1104I CTCTTC 1 cut(s) 2089
Eam1105I GACNNNNNGTC 1 cut(s) 2688
EarI CTCTTC 1 cut(s) 2089
EclXI CGGCCG 1 cut(s) 2699
Eco130I CCWWGG 5 cut(s) 977, 1535, 1690, 2167, 2818
Eco147I AGGCCT 1 cut(s) 1683
Eco24I GRGCYC 1 cut(s) 138
Eco31I GGTCTC 2 cut(s) 901, 2542
Eco32I GATATC 1 cut(s) 936
Eco47I GGWCC 4 cut(s) 374, 1662, 2747, 2777
Eco52I CGGCCG 1 cut(s) 2699
Eco57I CTGAAG 3 cut(s) 1412, 1796, 2436
Eco88I CYCGRG 2 cut(s) 1652, 2751
Eco91I GGTNACC 1 cut(s) 2782
EcoNI CCTNNNNNAGG 1 cut(s) 2467
EcoO109I RGGNCCY 2 cut(s) 134, 374
EcoO65I GGTNACC 1 cut(s) 2782
EcoRI GAATTC 1 cut(s) 1085
EcoRII CCWGG 3 cut(s) 735, 780, 2743
EcoRV GATATC 1 cut(s) 936
EcoT14I CCWWGG 5 cut(s) 977, 1535, 1690, 2167, 2818
EcoT38I GRGCYC 1 cut(s) 138
ErhI CCWWGG 5 cut(s) 977, 1535, 1690, 2167, 2818
Esp3I CGTCTC 1 cut(s) 1592
FalI AAGNNNNNCTT 2 cut(s) 2324, 2356
FaqI GGGAC 2 cut(s) 1648, 2553
FauI CCCGC 2 cut(s) 835, 1674
FbaI TGATCA 1 cut(s) 618
FblI GTMKAC 2 cut(s) 1156, 2302
FokI GGATG 7 cut(s) 884, 1094, 1322, 1749, 2156, 2228, 2327
FriOI GRGCYC 1 cut(s) 138
GlaI GCGC 2 cut(s) 2424, 2584
GsaI CCCAGC 3 cut(s) 1351, 1355, 1997
GsuI CTGGAG 4 cut(s) 377, 564, 719, 1406
HaeIII GGCC 7 cut(s) 90, 136, 342, 1168, 1683, 2701, 2743
HapII CCGG 2 cut(s) 2660, 2780
HgaI GACGC 3 cut(s) 1225, 2351, 2678
HhaI GCGC 2 cut(s) 2425, 2585
Hin1I GRCGYC 1 cut(s) 2684
Hin6I GCGC 2 cut(s) 2423, 2583
HinP1I GCGC 2 cut(s) 2423, 2583
HincII GTYRAC 3 cut(s) 418, 2101, 2599
HindII GTYRAC 3 cut(s) 418, 2101, 2599
HindIII AAGCTT 1 cut(s) 1190
HpaII CCGG 2 cut(s) 2660, 2780
HphI GGTGA 2 cut(s) 1186, 2776
Hpy99I CGWCG 5 cut(s) 2367, 2686, 2689, 2694, 2798
HpyCH4III ACNGT 9 cut(s) 321, 1627, 1793, 2509, 2580, 2638, 2655, 2666, 2788
HpyCH4IV ACGT 7 cut(s) 499, 950, 1601, 1818, 2595, 2684, 2793
HpyF10VI GCNNNNNNNGC 8 cut(s) 215, 706, 836, 1343, 2420, 2589, 2656, 2695
HpySE526I ACGT 7 cut(s) 499, 950, 1601, 1818, 2595, 2684, 2793
Hsp92I GRCGYC 1 cut(s) 2684
HspAI GCGC 2 cut(s) 2423, 2583
Ksp22I TGATCA 1 cut(s) 618
KspI CCGCGG 1 cut(s) 2705
Kzo9I GATC 8 cut(s) 112, 618, 1039, 1531, 1933, 2236, 2755, 2826
LmnI GCTCC 7 cut(s) 583, 772, 1387, 1504, 1539, 1987, 2518
Lsp1109I GCAGC 8 cut(s) 182, 221, 224, 227, 249, 787, 2002, 2471
LweI GCATC 3 cut(s) 1075, 1262, 1801
MaeII ACGT 7 cut(s) 499, 950, 1601, 1818, 2595, 2684, 2793
MaeIII GTNAC 5 cut(s) 987, 2012, 2023, 2374, 2782
MalI GATC 8 cut(s) 114, 620, 1041, 1533, 1935, 2238, 2757, 2828
MboI GATC 8 cut(s) 112, 618, 1039, 1531, 1933, 2236, 2755, 2826
MflI RGATCY 3 cut(s) 1039, 1531, 1933
MhlI GDGCHC 2 cut(s) 138, 580
MlyI GAGTC 6 cut(s) 629, 1276, 1916, 2441, 2575, 2823
MmeI TCCRAC 4 cut(s) 208, 1445, 2345, 2832
MroXI GAANNNNTTC 4 cut(s) 653, 1085, 1089, 1643
MslI CAYNNNNRTG 3 cut(s) 454, 1526, 2402
MspA1I CMGCKG 4 cut(s) 1351, 1401, 1993, 2704
MspCI CTTAAG 1 cut(s) 758
MspI CCGG 2 cut(s) 2660, 2780
MspR9I CCNGG 3 cut(s) 737, 782, 2745
MvaI CCWGG 3 cut(s) 737, 782, 2745
MvnI CGCG 4 cut(s) 1236, 2425, 2689, 2704
MwoI GCNNNNNNNGC 8 cut(s) 215, 706, 836, 1343, 2420, 2589, 2656, 2695
NcoI CCATGG 1 cut(s) 1690
NdeII GATC 8 cut(s) 112, 618, 1039, 1531, 1933, 2236, 2755, 2826
NlaIV GGNNCC 9 cut(s) 136, 190, 343, 1041, 1533, 1541, 1664, 2673, 2778
NmuCI GTSAC 2 cut(s) 987, 2782
NotI GCGGCCGC 1 cut(s) 2699
NspI RCATGY 3 cut(s) 244, 839, 1610
PaeI GCATGC 1 cut(s) 839
PagI TCATGA 1 cut(s) 109
PceI AGGCCT 1 cut(s) 1683
PdmI GAANNNNTTC 4 cut(s) 653, 1085, 1089, 1643
PfeI GAWTC 5 cut(s) 284, 1417, 2150, 2201, 2804
PfoI TCCNGGA 1 cut(s) 735
PleI GAGTC 6 cut(s) 629, 1276, 1915, 2440, 2574, 2822
PpsI GAGTC 6 cut(s) 629, 1276, 1915, 2440, 2574, 2822
PpuMI RGGWCCY 1 cut(s) 374
PshAI GACNNNNGTC 1 cut(s) 2604
PsiI TTATAA 1 cut(s) 2073
Psp1406I AACGTT 1 cut(s) 2595
Psp5II RGGWCCY 1 cut(s) 374
Psp6I CCWGG 3 cut(s) 735, 780, 2743
PspEI GGTNACC 1 cut(s) 2782
PspFI CCCAGC 3 cut(s) 1347, 1351, 1993
PspGI CCWGG 3 cut(s) 735, 780, 2743
PspN4I GGNNCC 9 cut(s) 136, 190, 343, 1041, 1533, 1541, 1664, 2673, 2778
PspOMI GGGCCC 1 cut(s) 134
PspPI GGNCC 8 cut(s) 134, 135, 341, 374, 1166, 1662, 2747, 2777
PspPPI RGGWCCY 1 cut(s) 374
PsuI RGATCY 3 cut(s) 1039, 1531, 1933
PvuII CAGCTG 2 cut(s) 1351, 1993
RsaI GTAC 7 cut(s) 65, 297, 1187, 1201, 1373, 1574, 2790
RsaNI GTAC 7 cut(s) 64, 296, 1186, 1200, 1372, 1573, 2789
RseI CAYNNNNRTG 3 cut(s) 454, 1526, 2402
SacII CCGCGG 1 cut(s) 2705
Sau3AI GATC 8 cut(s) 112, 618, 1039, 1531, 1933, 2236, 2755, 2826
Sau96I GGNCC 8 cut(s) 134, 135, 341, 374, 1166, 1662, 2747, 2777
ScaI AGTACT 1 cut(s) 1201
SchI GAGTC 6 cut(s) 629, 1276, 1916, 2441, 2575, 2823
ScrFI CCNGG 3 cut(s) 737, 782, 2745
SduI GDGCHC 2 cut(s) 138, 580
SfaNI GCATC 3 cut(s) 1075, 1262, 1801
SfcI CTRYAG 1 cut(s) 2303
Sfr303I CCGCGG 1 cut(s) 2705
SgrBI CCGCGG 1 cut(s) 2705
SinI GGWCC 4 cut(s) 374, 1662, 2747, 2777
SmiMI CAYNNNNRTG 3 cut(s) 454, 1526, 2402
SmlI CTYRAG 7 cut(s) 80, 299, 509, 758, 904, 1044, 1555
SmoI CTYRAG 7 cut(s) 80, 299, 509, 758, 904, 1044, 1555
SpeI ACTAGT 1 cut(s) 2603
SphI GCATGC 1 cut(s) 839
SseBI AGGCCT 1 cut(s) 1683
SsiI CCGC 8 cut(s) 828, 1131, 1214, 1401, 1667, 2698, 2702, 2704
StuI AGGCCT 1 cut(s) 1683
StyD4I CCNGG 3 cut(s) 735, 780, 2743
StyI CCWWGG 5 cut(s) 977, 1535, 1690, 2167, 2818
TaaI ACNGT 9 cut(s) 321, 1627, 1793, 2509, 2580, 2638, 2655, 2666, 2788
TaiI ACGT 7 cut(s) 502, 953, 1604, 1821, 2598, 2687, 2796
TaqI TCGA 7 cut(s) 466, 657, 1547, 1770, 1869, 2227, 2758
TatI WGTACW 4 cut(s) 63, 295, 1199, 1371
TauI GCSGC 2 cut(s) 2701, 2704
TfiI GAWTC 5 cut(s) 284, 1417, 2150, 2201, 2804
TscAI CASTG 7 cut(s) 100, 160, 588, 637, 974, 1902, 2404
TseFI GTSAC 2 cut(s) 987, 2782
TseI GCWGC 9 cut(s) 9, 170, 209, 212, 215, 237, 775, 1990, 2459
Tsp45I GTSAC 2 cut(s) 987, 2782
TspGWI ACGGA 4 cut(s) 1005, 1100, 2444, 2826
TspRI CASTG 7 cut(s) 100, 160, 588, 637, 974, 1902, 2404
Vha464I CTTAAG 1 cut(s) 758
VpaK11BI GGWCC 4 cut(s) 374, 1662, 2747, 2777
XagI CCTNNNNNAGG 1 cut(s) 2467
XapI RAATTY 5 cut(s) 811, 1085, 1456, 1579, 1744
XceI RCATGY 3 cut(s) 244, 839, 1610
XmaJI CCTAGG 1 cut(s) 2818
XmiI GTMKAC 2 cut(s) 1156, 2302
XmnI GAANNNNTTC 4 cut(s) 653, 1085, 1089, 1643
ZraI GACGTC 1 cut(s) 2685
ZrmI AGTACT 1 cut(s) 1201
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.