FvH4_4g00720

ATP-dependent RNA helicase SUPV3L1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0007161
Physical Location & Seq
Forward (+)
637925 .. 645201
7277 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g00720.t1

Sequence Viewer

Length: 1740 bp
ATGGCGGCATCGTTATTACTTCGCCGTAGGGTTTCATCTGCCGGCGTTTCTCGCACTCTCCAAGGTCTACCAGGTAATGTGGAACCCTTTTGCCTGCACTTAGAATTGAAGGTTGGAGCGTTGGTGAGTGTCTCTGATAAAACAAGGTTTTACAGCAGCTCCAGTGGCACCACGAGCGTTGATTTTTTAGACCTGACTTCTCCTCATACATGGTATCCAAAAGCTCGAAGTAAGCCTCGCAAGGTTATCTTGCACATGGGTCCCACAAATAGTGGTAAAACACACAATGCTTTAAAGCGACTCGAATCAAGTCCATCTGGCATATACTGTGGTCCTCTGAGATTGTTGGCCTGGGAGGTTGCAAAACGGTTGAACAAGGCAAAAGTGCCATGTGATTTACTTACTGGACAAGAGAGAGAGGAAGTCGATGGTGCAAAACACAAGGCTGTGACAGTTGAGATGGCTGATGTAACCTCCAACTACCATTGTGCCGTTATTGATGAAATTCAGATGCTGGGCTGTAGGAACAGAGGGTTTTCTTTCACACGTGCTCTATTAGGAATTTCTGCTGATGAACTTCATGTTTGTGGAGATCCAGCTGCCATCCCACTTATTAAGAAAATGTTGAAAGTGACCAGTGATCAAGTTGAGGTTCAATGCTATGAGAGACTTTCACCTCTTGCTCCAATGAAGGTTCCTCTTGGTTCCTTTTCTAATATAAGGACAGGTGATTGCATTGTTACATTTTCACGGCGTGAAATATACAGACTAAAGAAAAAAATTGAAAGTAATGGAAAGCATCTCTGTTCTGTCGTGTATGGTTCACTTCCACCAGAGACTCGAACCAGACAGGCAACAATGTTCAATGATTCTAGCAGTGAGTTGGATGTTCTGGTAGCAAGTGATGCCATCGGGATGGGTCTTAATCTGAACATATCACGAATCATATTTTCAACGATGACAAAATTTGATGGTATTGAGAACCGGGAACTCACTGTACCAGAGATCAAACAAATTGCAGGAAGAGCTGGCAGGTATGGATCAAGGTTTCCTGTCGGTGAAGTGACTTGCTTAGATGCAGCTGATCTGCCTCTTCTGGATTCATCACTAAACTCCCCATCTCCAACTCTTGAGGTGCACTCTGTAATGCAGAGGGCTGGATTATTTCCTACCTTTGATCTTATGTATATGTATTCACGTTTGCACCCAAATAGAGGCCTCTACCAGATACTGGAGCATTTTGTAGAGAATGCAACATTGTCAGACAATTATTTCATTGCTGATTCTGAAGAAATAATGAAAGTTGCTACTCTGATTGATGAGTTGCCTCTCGGGTTGCATGATAAGTATCTTTTCTGTATAAGCCCGGTTGACATGAATGATGACATTTCATCCCAGGGTCTCACACAGTTTGCTCAAAATTATGCAAAAAGGGGGATTGTGCCACTCCGAGAAATCTTTACACCAGGGACACTTCAGATACCAAAAACTCCAGCTGCACTCAAAGAGCTTGAATCCATTCACAAGGTATTGGATCTGTATGTTTGGCTGAGTTTCCGATTAGAGGAGTCATTCCCAGACCGTGAGCTGGCATCTTCACAGAAGTCCATCTGCCACATGTTGATCGAAGAGTTTCTAGAAAGATTTGGTTTGCAAATGCACAAGCCCAAGGCCAAGAGATTAGCTTCAAAACCTACCTTAACTTCCTTACTGTCCCAAATAAACAGAACCCACTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000177 GO:0000178 GO:0000957 GO:0000958 GO:0000959 GO:0000960 GO:0000962 GO:0000963 GO:0000965 GO:0001558 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003723 GO:0003724 GO:0003725 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005759 GO:0006139 GO:0006259 GO:0006310 GO:0006325 GO:0006396 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006996 GO:0007005 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009056 GO:0009057 GO:0009628 GO:0009651 GO:0009653 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009937 GO:0009939 GO:0009966 GO:0009967 GO:0009987 GO:0010467 GO:0010468 GO:0010604 GO:0010605 GO:0010629 GO:0010646 GO:0010647 GO:0010928 GO:0010929 GO:0010941 GO:0016043 GO:0016070 GO:0016071 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0019439 GO:0023051 GO:0023056 GO:0030307 GO:0031123 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031974 GO:0032392 GO:0032502 GO:0032508 GO:0032989 GO:0032990 GO:0032991 GO:0034458 GO:0034641 GO:0034655 GO:0035945 GO:0035946 GO:0040008 GO:0042623 GO:0042981 GO:0043066 GO:0043067 GO:0043069 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043954 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0045025 GO:0045927 GO:0045935 GO:0046483 GO:0046700 GO:0047484 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0060255 GO:0060548 GO:0065007 GO:0070013 GO:0070035 GO:0070584 GO:0070827 GO:0071025 GO:0071026 GO:0071103 GO:0071704 GO:0071840 GO:0080036 GO:0080038 GO:0080090 GO:0080134 GO:0090304 GO:0097159 GO:0098798 GO:0140053 GO:0140097 GO:0140098 GO:1901000 GO:1901002 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1902494 GO:1902584 GO:1905354 GO:2000070 GO:2000827
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Helicase_C SUV3_C

Protein Analysis

580

Amino Acids

64.5

Weight (kDa)

8.58

Isoelectric Point (pI)

47.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DEXQc_Suv3 PF22527 68 - 221 3.4e-65 DEXQ-box helicase domain of Suv3
Helicase_C PF00271 242 - 347 3.2e-12 Helicase conserved C-terminal domain
Suv3_C_1 PF18147 435 - 476 9.7e-11 Suv3 C-terminal domain 1
SUV3_C PF12513 501 - 548 2.1e-16 ATP-dependent RNA helicase SUV3 C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1023
AccB1I GGYRCC 1 cut(s) 167
AccB7I CCANNNNNTGG 1 cut(s) 1231
AccI GTMKAC 1 cut(s) 67
AciI CCGC 1 cut(s) 5
AclWI GGATC 3 cut(s) 587, 1048, 1542
AcsI RAATTY 3 cut(s) 504, 561, 965
AcuI CTGAAG 2 cut(s) 1308, 1460
AcvI CACGTG 1 cut(s) 548
AdeI CACNNNGTG 1 cut(s) 755
AfaI GTAC 1 cut(s) 999
AfiI CCNNNNNNNGG 4 cut(s) 1214, 1231, 1564, 1588
AflIII ACRYGT 2 cut(s) 545, 1617
AgsI TTSAA 9 cut(s) 109, 373, 628, 656, 785, 865, 954, 1514, 1689
AjnI CCWGG 4 cut(s) 70, 350, 1395, 1465
AjuI GAANNNNNNNTTGG 2 cut(s) 96, 128
AluBI AGCT 9 cut(s) 159, 224, 599, 1028, 1082, 1496, 1510, 1588, 1685
AluI AGCT 9 cut(s) 159, 224, 599, 1028, 1082, 1496, 1510, 1588, 1685
Alw21I GWGCWC 2 cut(s) 553, 1140
Alw26I GTCTC 4 cut(s) 136, 661, 830, 1406
Alw44I GTGCAC 1 cut(s) 1136
AlwI GGATC 3 cut(s) 587, 1048, 1542
AlwNI CAGNNNCTG 2 cut(s) 514, 1231
Ama87I CYCGRG 1 cut(s) 1331
AoxI GGCC 3 cut(s) 348, 1216, 1671
ApaLI GTGCAC 1 cut(s) 1136
ApeKI GCWGC 4 cut(s) 156, 599, 1079, 1496
ApoI RAATTY 3 cut(s) 504, 561, 965
Asp700I GAANNNNTTC 2 cut(s) 1518, 1632
AspS9I GGNCC 2 cut(s) 260, 332
AsuC2I CCSGG 2 cut(s) 986, 1367
AsuHPI GGTGA 4 cut(s) 136, 666, 740, 1070
AvaI CYCGRG 1 cut(s) 1331
AvaII GGWCC 2 cut(s) 260, 332
BaeGI GKGCMC 1 cut(s) 1140
BanI GGYRCC 1 cut(s) 167
BauI CACGAG 1 cut(s) 172
BbrPI CACGTG 1 cut(s) 548
Bbv12I GWGCWC 2 cut(s) 553, 1140
BbvI GCAGC 4 cut(s) 168, 586, 1091, 1483
BccI CCATC 9 cut(s) 322, 422, 454, 611, 910, 917, 965, 1126, 1616
BceAI ACGGC 3 cut(s) 9, 476, 767
BciT130I CCWGG 4 cut(s) 72, 352, 1397, 1467
BciVI GTATCC 1 cut(s) 225
BclI TGATCA 1 cut(s) 640
BcnI CCSGG 2 cut(s) 986, 1367
BcoDI GTCTC 4 cut(s) 136, 661, 830, 1406
BfaI CTAG 2 cut(s) 873, 1637
BfmI CTRYAG 1 cut(s) 520
BfuAI ACCTGC 1 cut(s) 1023
BfuI GTATCC 1 cut(s) 225
BisI GCNGC 5 cut(s) 6, 157, 600, 1080, 1497
BlsI GCNGC 5 cut(s) 7, 158, 601, 1081, 1498
Bme1390I CCNGG 6 cut(s) 72, 352, 986, 1367, 1397, 1467
Bme18I GGWCC 2 cut(s) 260, 332
BmeT110I CYCGRG 1 cut(s) 1331
BmgT120I GGNCC 2 cut(s) 260, 332
BmiI GGNNCC 6 cut(s) 84, 169, 261, 262, 696, 706
BmrFI CCNGG 6 cut(s) 72, 352, 986, 1367, 1397, 1467
BmsI GCATC 6 cut(s) 17, 501, 808, 895, 1066, 1601
BplI GAGNNNNNCTC 2 cut(s) 1124, 1156
BpmI CTGGAG 3 cut(s) 145, 1253, 1476
BpuEI CTTGAG 1 cut(s) 1151
BpuMI CCSGG 2 cut(s) 986, 1367
BsaAI YACGTR 1 cut(s) 548
BsaBI GATNNNNATC 1 cut(s) 1347
BsaI GGTCTC 1 cut(s) 1406
BsaJI CCNNGG 6 cut(s) 61, 351, 1395, 1396, 1466, 1668
BsaXI ACNNNNNCTCC 4 cut(s) 108, 138, 143, 173
Bsc4I CCNNNNNNNGG 4 cut(s) 1214, 1231, 1564, 1588
Bse118I RCCGGY 1 cut(s) 41
Bse1I ACTGG 4 cut(s) 162, 409, 636, 1236
Bse3DI GCAATG 1 cut(s) 1275
Bse8I GATNNNNATC 1 cut(s) 1347
BseBI CCWGG 4 cut(s) 72, 352, 1397, 1467
BseDI CCNNGG 6 cut(s) 61, 351, 1395, 1396, 1466, 1668
BseGI GGATG 4 cut(s) 603, 892, 921, 1391
BseJI GATNNNNATC 1 cut(s) 1347
BseLI CCNNNNNNNGG 4 cut(s) 1214, 1231, 1564, 1588
BseMI GCAATG 1 cut(s) 1275
BseMII CTCAG 2 cut(s) 329, 1541
BseNI ACTGG 4 cut(s) 162, 409, 636, 1236
BseRI GAGGAG 2 cut(s) 192, 1580
BseSI GKGCMC 1 cut(s) 1140
BseXI GCAGC 4 cut(s) 168, 586, 1091, 1483
BseYI CCCAGC 1 cut(s) 514
BsgI GTGCAG 2 cut(s) 80, 1482
BshFI GGCC 3 cut(s) 350, 1218, 1673
BshNI GGYRCC 1 cut(s) 167
BsiHKAI GWGCWC 2 cut(s) 553, 1140
BsiHKCI CYCGRG 1 cut(s) 1331
BsiSI CCGG 3 cut(s) 42, 985, 1367
BslFI GGGAC 3 cut(s) 246, 1483, 1699
BslI CCNNNNNNNGG 4 cut(s) 1214, 1231, 1564, 1588
BsmAI GTCTC 4 cut(s) 136, 661, 830, 1406
BsmFI GGGAC 3 cut(s) 246, 1483, 1699
BsmI GAATGC 1 cut(s) 1255
BsnI GGCC 3 cut(s) 350, 1218, 1673
Bso31I GGTCTC 1 cut(s) 1406
BsoBI CYCGRG 1 cut(s) 1331
Bsp1286I GDGCHC 2 cut(s) 553, 1140
Bsp143I GATC 8 cut(s) 592, 640, 1005, 1040, 1084, 1177, 1534, 1623
BspACI CCGC 1 cut(s) 5
BspANI GGCC 3 cut(s) 350, 1218, 1673
BspCNI CTCAG 2 cut(s) 330, 1542
BspLI GGNNCC 6 cut(s) 84, 169, 261, 262, 696, 706
BspMI ACCTGC 1 cut(s) 1023
BspPI GGATC 3 cut(s) 587, 1048, 1542
BspQI GCTCTTC 1 cut(s) 1018
BspT107I GGYRCC 1 cut(s) 167
BspTNI GGTCTC 1 cut(s) 1406
BsrDI GCAATG 1 cut(s) 1275
BsrFI RCCGGY 1 cut(s) 41
BsrI ACTGG 4 cut(s) 162, 409, 636, 1236
BssAI RCCGGY 1 cut(s) 41
BssECI CCNNGG 6 cut(s) 61, 351, 1395, 1396, 1466, 1668
BssMI GATC 8 cut(s) 592, 640, 1005, 1040, 1084, 1177, 1534, 1623
BssSI CACGAG 1 cut(s) 172
BssT1I CCWWGG 2 cut(s) 61, 1668
Bst2BI CACGAG 1 cut(s) 172
Bst2UI CCWGG 4 cut(s) 72, 352, 1397, 1467
Bst4CI ACNGT 7 cut(s) 329, 369, 454, 997, 1410, 1583, 1713
Bst6I CTCTTC 3 cut(s) 1018, 1098, 1623
BstAPI GCANNNNNTGC 1 cut(s) 905
BstBAI YACGTR 1 cut(s) 548
BstC8I GCNNGC 4 cut(s) 43, 95, 1030, 1590
BstDEI CTNAG 4 cut(s) 100, 338, 1072, 1550
BstF5I GGATG 4 cut(s) 603, 892, 921, 1391
BstKTI GATC 8 cut(s) 595, 643, 1008, 1043, 1087, 1180, 1537, 1626
BstMAI GTCTC 4 cut(s) 136, 661, 830, 1406
BstMBI GATC 8 cut(s) 592, 640, 1005, 1040, 1084, 1177, 1534, 1623
BstMWI GCNNNNNNNGC 5 cut(s) 51, 165, 174, 905, 1025
BstNI CCWGG 4 cut(s) 72, 352, 1397, 1467
BstNSI RCATGY 1 cut(s) 1621
BstSCI CCNGG 6 cut(s) 70, 350, 984, 1365, 1395, 1465
BstSFI CTRYAG 1 cut(s) 520
BstSLI GKGCMC 1 cut(s) 1140
BstV1I GCAGC 4 cut(s) 168, 586, 1091, 1483
BstX2I RGATCY 2 cut(s) 592, 1534
BstXI CCANNNNNNTGG 1 cut(s) 916
BstYI RGATCY 2 cut(s) 592, 1534
BsuI GTATCC 1 cut(s) 225
BsuRI GGCC 3 cut(s) 350, 1218, 1673
BtsCI GGATG 4 cut(s) 603, 892, 921, 1391
BtsI GCAGTG 1 cut(s) 883
BtsIMutI CAGTG 4 cut(s) 169, 643, 883, 993
BveI ACCTGC 1 cut(s) 1023
Cac8I GCNNGC 4 cut(s) 43, 95, 1030, 1590
CaiI CAGNNNCTG 2 cut(s) 514, 1231
Cfr10I RCCGGY 1 cut(s) 41
Cfr13I GGNCC 2 cut(s) 260, 332
CsiI ACCWGGT 1 cut(s) 70
Csp6I GTAC 1 cut(s) 998
CspCI CAANNNNNGTGG 2 cut(s) 160, 195
CviAII CATG 7 cut(s) 210, 256, 390, 581, 1340, 1375, 1618
CviQI GTAC 1 cut(s) 998
DdeI CTNAG 4 cut(s) 100, 338, 1072, 1550
DpnI GATC 8 cut(s) 594, 642, 1007, 1042, 1086, 1179, 1536, 1625
DpnII GATC 8 cut(s) 592, 640, 1005, 1040, 1084, 1177, 1534, 1623
DraI TTTAAA 1 cut(s) 294
DraIII CACNNNGTG 1 cut(s) 755
Eam1104I CTCTTC 3 cut(s) 1018, 1098, 1623
EarI CTCTTC 3 cut(s) 1018, 1098, 1623
Eco130I CCWWGG 2 cut(s) 61, 1668
Eco147I AGGCCT 1 cut(s) 1218
Eco31I GGTCTC 1 cut(s) 1406
Eco47I GGWCC 2 cut(s) 260, 332
Eco57I CTGAAG 2 cut(s) 1308, 1460
Eco72I CACGTG 1 cut(s) 548
Eco88I CYCGRG 1 cut(s) 1331
EcoO109I RGGNCCY 1 cut(s) 260
EcoRII CCWGG 4 cut(s) 70, 350, 1395, 1465
EcoT14I CCWWGG 2 cut(s) 61, 1668
ErhI CCWWGG 2 cut(s) 61, 1668
FaeI CATG 7 cut(s) 213, 259, 393, 584, 1343, 1378, 1621
FalI AAGNNNNNCTT 2 cut(s) 233, 265
FaqI GGGAC 3 cut(s) 246, 1483, 1699
FatI CATG 7 cut(s) 209, 255, 389, 580, 1339, 1374, 1617
FbaI TGATCA 1 cut(s) 640
FblI GTMKAC 1 cut(s) 67
Fnu4HI GCNGC 5 cut(s) 6, 157, 600, 1080, 1497
FokI GGATG 4 cut(s) 590, 899, 928, 1378
Fsp4HI GCNGC 5 cut(s) 6, 157, 600, 1080, 1497
FspBI CTAG 2 cut(s) 873, 1637
GluI GCNGC 5 cut(s) 6, 157, 600, 1080, 1497
GsaI CCCAGC 1 cut(s) 518
GsuI CTGGAG 3 cut(s) 145, 1253, 1476
HaeIII GGCC 3 cut(s) 350, 1218, 1673
HapII CCGG 3 cut(s) 42, 985, 1367
Hin1II CATG 7 cut(s) 213, 259, 393, 584, 1343, 1378, 1621
HincII GTYRAC 1 cut(s) 1372
HindII GTYRAC 1 cut(s) 1372
HinfI GANTC 9 cut(s) 300, 305, 838, 869, 942, 1100, 1283, 1514, 1568
HpaII CCGG 3 cut(s) 42, 985, 1367
HphI GGTGA 4 cut(s) 136, 666, 740, 1070
Hpy166II GTNNAC 4 cut(s) 68, 824, 1138, 1372
Hpy188III TCNNGA 5 cut(s) 913, 939, 1097, 1130, 1637
Hpy8I GTNNAC 4 cut(s) 68, 824, 1138, 1372
HpyAV CCTTC 2 cut(s) 103, 685
HpyCH4III ACNGT 7 cut(s) 329, 369, 454, 997, 1410, 1583, 1713
HpyCH4IV ACGT 2 cut(s) 547, 1198
HpyF10VI GCNNNNNNNGC 5 cut(s) 51, 165, 174, 905, 1025
HpyF3I CTNAG 4 cut(s) 100, 338, 1072, 1550
HpySE526I ACGT 2 cut(s) 547, 1198
Hsp92II CATG 7 cut(s) 213, 259, 393, 584, 1343, 1378, 1621
KflI GGGWCCC 1 cut(s) 260
KroI GCCGGC 1 cut(s) 41
KroNI GCCGGC 1 cut(s) 43
Ksp22I TGATCA 1 cut(s) 640
Kzo9I GATC 8 cut(s) 592, 640, 1005, 1040, 1084, 1177, 1534, 1623
LguI GCTCTTC 1 cut(s) 1018
LmnI GCTCC 4 cut(s) 116, 164, 688, 1234
Lsp1109I GCAGC 4 cut(s) 168, 586, 1091, 1483
LweI GCATC 6 cut(s) 17, 501, 808, 895, 1066, 1601
MabI ACCWGGT 1 cut(s) 70
MaeI CTAG 2 cut(s) 873, 1637
MaeII ACGT 2 cut(s) 547, 1198
MaeIII GTNAC 5 cut(s) 448, 469, 631, 739, 1063
MalI GATC 8 cut(s) 594, 642, 1007, 1042, 1086, 1179, 1536, 1625
MboI GATC 8 cut(s) 592, 640, 1005, 1040, 1084, 1177, 1534, 1623
MboII GAAGA 5 cut(s) 1035, 1085, 1301, 1587, 1640
MflI RGATCY 2 cut(s) 592, 1534
MhlI GDGCHC 2 cut(s) 553, 1140
MluCI AATT 8 cut(s) 104, 504, 561, 780, 965, 1014, 1267, 1420
MlyI GAGTC 3 cut(s) 294, 832, 1577
MmeI TCCRAC 4 cut(s) 94, 501, 864, 1148
MroNI GCCGGC 1 cut(s) 41
MroXI GAANNNNTTC 2 cut(s) 1518, 1632
MseI TTAA 4 cut(s) 293, 615, 924, 1700
MslI CAYNNNNRTG 2 cut(s) 585, 914
MspA1I CMGCKG 3 cut(s) 599, 1082, 1496
MspI CCGG 3 cut(s) 42, 985, 1367
MspR9I CCNGG 6 cut(s) 72, 352, 986, 1367, 1397, 1467
Mva1269I GAATGC 1 cut(s) 1255
MvaI CCWGG 4 cut(s) 72, 352, 1397, 1467
MwoI GCNNNNNNNGC 5 cut(s) 51, 165, 174, 905, 1025
NaeI GCCGGC 1 cut(s) 43
NciI CCSGG 2 cut(s) 986, 1367
NdeII GATC 8 cut(s) 592, 640, 1005, 1040, 1084, 1177, 1534, 1623
NgoMIV GCCGGC 1 cut(s) 41
NlaIII CATG 7 cut(s) 213, 259, 393, 584, 1343, 1378, 1621
NlaIV GGNNCC 6 cut(s) 84, 169, 261, 262, 696, 706
NmuCI GTSAC 3 cut(s) 448, 631, 1063
NspI RCATGY 1 cut(s) 1621
PasI CCCWGGG 1 cut(s) 1396
PceI AGGCCT 1 cut(s) 1218
PciI ACATGT 1 cut(s) 1617
PciSI GCTCTTC 1 cut(s) 1018
PctI GAATGC 1 cut(s) 1255
PdiI GCCGGC 1 cut(s) 43
PdmI GAANNNNTTC 2 cut(s) 1518, 1632
PfeI GAWTC 6 cut(s) 305, 869, 942, 1100, 1283, 1514
PflMI CCANNNNNTGG 1 cut(s) 1231
PkrI GCNGC 5 cut(s) 7, 158, 601, 1081, 1498
PleI GAGTC 3 cut(s) 294, 832, 1576
PmaCI CACGTG 1 cut(s) 548
PmlI CACGTG 1 cut(s) 548
PpsI GAGTC 3 cut(s) 294, 832, 1576
Ppu21I YACGTR 1 cut(s) 548
PpuMI RGGWCCY 1 cut(s) 260
PscI ACATGT 1 cut(s) 1617
Psp5II RGGWCCY 1 cut(s) 260
Psp6I CCWGG 4 cut(s) 70, 350, 1395, 1465
PspCI CACGTG 1 cut(s) 548
PspFI CCCAGC 1 cut(s) 514
PspGI CCWGG 4 cut(s) 70, 350, 1395, 1465
PspN4I GGNNCC 6 cut(s) 84, 169, 261, 262, 696, 706
PspPI GGNCC 2 cut(s) 260, 332
PspPPI RGGWCCY 1 cut(s) 260
PsrI GAACNNNNNNTAC 2 cut(s) 981, 1013
PstNI CAGNNNCTG 2 cut(s) 514, 1231
PsuI RGATCY 2 cut(s) 592, 1534
PvuII CAGCTG 3 cut(s) 599, 1082, 1496
RsaI GTAC 1 cut(s) 999
RsaNI GTAC 1 cut(s) 998
RseI CAYNNNNRTG 2 cut(s) 585, 914
SapI GCTCTTC 1 cut(s) 1018
SaqAI TTAA 4 cut(s) 293, 615, 924, 1700
SatI GCNGC 5 cut(s) 6, 157, 600, 1080, 1497
Sau3AI GATC 8 cut(s) 592, 640, 1005, 1040, 1084, 1177, 1534, 1623
Sau96I GGNCC 2 cut(s) 260, 332
SchI GAGTC 3 cut(s) 294, 832, 1577
ScrFI CCNGG 6 cut(s) 72, 352, 986, 1367, 1397, 1467
SduI GDGCHC 2 cut(s) 553, 1140
SexAI ACCWGGT 1 cut(s) 70
SfaNI GCATC 6 cut(s) 17, 501, 808, 895, 1066, 1601
SfcI CTRYAG 1 cut(s) 520
SinI GGWCC 2 cut(s) 260, 332
SmiMI CAYNNNNRTG 2 cut(s) 585, 914
SmlI CTYRAG 1 cut(s) 1130
SmoI CTYRAG 1 cut(s) 1130
Sse9I AATT 8 cut(s) 104, 504, 561, 780, 965, 1014, 1267, 1420
SseBI AGGCCT 1 cut(s) 1218
SsiI CCGC 1 cut(s) 5
SspMI CTAG 2 cut(s) 873, 1637
StuI AGGCCT 1 cut(s) 1218
StyD4I CCNGG 6 cut(s) 70, 350, 984, 1365, 1395, 1465
StyI CCWWGG 2 cut(s) 61, 1668
TaaI ACNGT 7 cut(s) 329, 369, 454, 997, 1410, 1583, 1713
TaiI ACGT 2 cut(s) 550, 1201
TaqI TCGA 5 cut(s) 226, 303, 426, 841, 1626
TasI AATT 8 cut(s) 104, 504, 561, 780, 965, 1014, 1267, 1420
TauI GCSGC 1 cut(s) 8
TfiI GAWTC 6 cut(s) 305, 869, 942, 1100, 1283, 1514
Tru1I TTAA 4 cut(s) 293, 615, 924, 1700
Tru9I TTAA 4 cut(s) 293, 615, 924, 1700
TscAI CASTG 4 cut(s) 169, 643, 883, 1000
TseFI GTSAC 3 cut(s) 448, 631, 1063
TseI GCWGC 4 cut(s) 156, 599, 1079, 1496
Tsp45I GTSAC 3 cut(s) 448, 631, 1063
TspRI CASTG 4 cut(s) 169, 643, 883, 1000
Van91I CCANNNNNTGG 1 cut(s) 1231
VneI GTGCAC 1 cut(s) 1136
VpaK11BI GGWCC 2 cut(s) 260, 332
XapI RAATTY 3 cut(s) 504, 561, 965
XbaI TCTAGA 1 cut(s) 1636
XceI RCATGY 1 cut(s) 1621
XmiI GTMKAC 1 cut(s) 67
XmnI GAANNNNTTC 2 cut(s) 1518, 1632
XspI CTAG 2 cut(s) 873, 1637
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.