MD13G1197200.v1.1

ATP-dependent RNA helicase SUPV3L1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
OG0007161
Physical Location & Seq
Forward (+)
17255348 .. 17262722
7375 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1197200.v1.1.491

Sequence Viewer

Length: 1707 bp
ATGGCGGCATCGTTGATACTCTCCCGAAGAATTTCATCTGTGGGCGTTTCTCGCACTCTCCAGGGTAATGTGCGGCCCTCTTGTCTGCACTTGGAATTGAAGGTCGCGGCTTTGATTAATGTTGTTGATAAAACAAAACAGTATAGCAGCTCCAGTGGTACAACGCAGTTTGATTTTACTGACCTGACTTCTCCTCATACTTGGTATCCAAAAGCTCGAAGTAAGCAGCGCAAGGTTATCCTGCACATGGGTCCCACGAATAGTGGTAAGACGTACAATGCTCTGAAGCGACTGGAATCAAGTCCATCTGGAATATACTGTGGTCCTCTGAGATTGTTGGCTTGGGAGGTTGCACAACGGTTGAACAAGGCAAAAGTTCCTTGTGATCTTATTACAGGACAAGAGAGAGACGAGGTTGATGGTGCAAAACACAAGGCTGTGACAGTTGAAATGGCTGATGTAACTTCCAGCTACCATTGTGCCATTGTTGATGAAATTCAGATGTTGAGTTGTAAGACGAGGGGCTTTTCCTTTACACGAGCTCTATTAGGAATATCTGCCGATGAACTTCACCTTTGTGGAGATCCAGCTTCTGTTCCTCTTATTCAGGAAATATTAAAAGTAACTGGTGATCATGTTGAGGTTCACTTCTATGAGAGACTTTCGCCTCTTGTTCCAATGAAGGTTCCTCTCGGTTCTTTTTCTAATATAAGGACAGGCGACTGCATTGTAACCTTTTCACGCCACAAAATATACAAATTAAAGAAAGAAATTGAAACTGTGGGAAAACATCTTTGTTCGGTTGTTTATGGTTCGCTTCCACCGGAGACTCGAACAAGACAGGCAACCATGTTTAATGATGCAAGCAGTGAGTTTGATGTTCTCGTGGCTAGTGATGCCATCGGGATGGGTCTTAATCTGAACATTTCACGGATCATATTCTCAACAATGATGAAATTTGATGGTTTTGAGATGCGGGAGCTCACTGTACCGGAGGTCAAACAAATTGCAGGAAGAGCCGGCAGGTATGGATCAAAATTTCCTGTTGGTGAAGTGACTTGTTTAAATGCAGATGATTTGTCCTTGCTTCATTCATCGCTAGAATCCCCATCTCCGACTCTTGAGAGTGCCGGATTATTTCCTACCTTTGATCTTATGTATATGTATTCACGTTTACACCCAGAATGCGGCCTCTACCAAATTCTGGAACATTTTTTAGAGAATGCCAAATTATCGGACAATTATTTTATTGCTGACTGTGAAGAAGTATTGAAAGTTGCTGCTGTTATCGATGCGTTGCCTCTTGGGTTGCATGATAAGTACCTTTTCTGCATAAGCCCAGTTGACATGGATGACGAAATTTCATCCCAGGGTCTGACGCAGTTTGCACAAAATTATGCACAAAAGGGCATTGTTCGGCTCCGTGAAATATTCACGCCAGGATCACTTAAGGTACCAAAAACGGAAGCTGCACTCAAGGAGCTTGAATCCATTCACAAGGTTTTGGATCTATACGTTTGGTTGAGTTTCCGATTGGAGGAATCATTTCCAGACCGCGAGCTTGCATCTACACAGAAGTCCATCTGCAGCATGTTGATCGAAGACTTTCTGGAGAGGTTAGGATGGCAGAAGCCGAGAAGCAAGAGATTAGCCTCACGTACTCCCTCAACTTCACTATTATCCCGGAAAGCCAGACCGTACTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000177 GO:0000178 GO:0000957 GO:0000958 GO:0000959 GO:0000960 GO:0000962 GO:0000963 GO:0000965 GO:0001558 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003723 GO:0003724 GO:0003725 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005759 GO:0006139 GO:0006259 GO:0006310 GO:0006325 GO:0006396 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006996 GO:0007005 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009056 GO:0009057 GO:0009628 GO:0009651 GO:0009653 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009937 GO:0009939 GO:0009966 GO:0009967 GO:0009987 GO:0010467 GO:0010468 GO:0010604 GO:0010605 GO:0010629 GO:0010646 GO:0010647 GO:0010928 GO:0010929 GO:0010941 GO:0016043 GO:0016070 GO:0016071 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0019439 GO:0023051 GO:0023056 GO:0030307 GO:0031123 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031974 GO:0032392 GO:0032502 GO:0032508 GO:0032989 GO:0032990 GO:0032991 GO:0034458 GO:0034641 GO:0034655 GO:0035945 GO:0035946 GO:0040008 GO:0042623 GO:0042981 GO:0043066 GO:0043067 GO:0043069 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043954 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0045025 GO:0045927 GO:0045935 GO:0046483 GO:0046700 GO:0047484 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0060255 GO:0060548 GO:0065007 GO:0070013 GO:0070035 GO:0070584 GO:0070827 GO:0071025 GO:0071026 GO:0071103 GO:0071704 GO:0071840 GO:0080036 GO:0080038 GO:0080090 GO:0080134 GO:0090304 GO:0097159 GO:0098798 GO:0140053 GO:0140097 GO:0140098 GO:1901000 GO:1901002 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1902494 GO:1902584 GO:1905354 GO:2000070 GO:2000827
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Helicase_C SUV3_C

Protein Analysis

569

Amino Acids

63.39

Weight (kDa)

7.88

Isoelectric Point (pI)

43.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DEXQc_Suv3 PF22527 65 - 218 2e-65 DEXQ-box helicase domain of Suv3
Helicase_C PF00271 238 - 344 2.3e-11 Helicase conserved C-terminal domain
Suv3_C_1 PF18147 426 - 467 1.5e-10 Suv3 C-terminal domain 1
SUV3_C PF12513 492 - 539 1.5e-16 ATP-dependent RNA helicase SUV3 C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1014
Acc65I GGTACC 1 cut(s) 1453
AccB1I GGYRCC 1 cut(s) 1453
AccB7I CCANNNNNTGG 1 cut(s) 1204
AccII CGCG 2 cut(s) 107, 1557
AciI CCGC 6 cut(s) 5, 73, 107, 976, 1188, 1555
AclWI GGATC 5 cut(s) 578, 941, 1039, 1450, 1515
AcsI RAATTY 6 cut(s) 30, 495, 956, 1037, 1200, 1359
AcuI CTGAAG 1 cut(s) 305
AfaI GTAC 7 cut(s) 160, 275, 990, 1322, 1455, 1660, 1700
AfiI CCNNNNNNNGG 4 cut(s) 247, 1187, 1204, 1537
AflII CTTAAG 1 cut(s) 1448
AgsI TTSAA 6 cut(s) 100, 364, 449, 776, 1273, 1487
AjnI CCWGG 3 cut(s) 60, 1368, 1438
AleI CACNNNNGTG 1 cut(s) 576
AluBI AGCT 9 cut(s) 150, 215, 471, 542, 590, 982, 1469, 1483, 1561
AluI AGCT 9 cut(s) 150, 215, 471, 542, 590, 982, 1469, 1483, 1561
Alw21I GWGCWC 2 cut(s) 544, 984
Alw26I GTCTC 3 cut(s) 402, 652, 821
AlwI GGATC 5 cut(s) 578, 941, 1039, 1450, 1515
AlwNI CAGNNNCTG 2 cut(s) 593, 1375
AoxI GGCC 2 cut(s) 74, 1189
ApeKI GCWGC 5 cut(s) 147, 226, 1280, 1469, 1587
ApoI RAATTY 6 cut(s) 30, 495, 956, 1037, 1200, 1359
AseI ATTAAT 1 cut(s) 117
Asp700I GAANNNNTTC 4 cut(s) 31, 1491, 1545, 1605
Asp718I GGTACC 1 cut(s) 1453
AspLEI GCGC 1 cut(s) 231
AspS9I GGNCC 3 cut(s) 75, 251, 323
AsuC2I CCSGG 1 cut(s) 1684
AsuHPI GGTGA 3 cut(s) 563, 641, 1061
AvaII GGWCC 2 cut(s) 251, 323
BanI GGYRCC 1 cut(s) 1453
BanII GRGCYC 2 cut(s) 544, 984
BauI CACGAG 2 cut(s) 537, 884
BbsI GAAGAC 1 cut(s) 1608
Bbv12I GWGCWC 2 cut(s) 544, 984
BbvI GCAGC 5 cut(s) 159, 238, 1267, 1456, 1599
BccI CCATC 8 cut(s) 313, 413, 901, 908, 956, 1117, 1589, 1617
BcgI CGANNNNNNTGC 2 cut(s) 1579, 1613
BciT130I CCWGG 3 cut(s) 62, 1370, 1440
BciVI GTATCC 1 cut(s) 216
BclI TGATCA 1 cut(s) 631
BcnI CCSGG 1 cut(s) 1684
BcoDI GTCTC 3 cut(s) 402, 652, 821
BfaI CTAG 2 cut(s) 891, 1100
BfmI CTRYAG 1 cut(s) 1585
BfrI CTTAAG 1 cut(s) 1448
BfuAI ACCTGC 1 cut(s) 1014
BfuI GTATCC 1 cut(s) 216
BisI GCNGC 9 cut(s) 6, 74, 108, 148, 227, 1189, 1281, 1470, 1588
BlsI GCNGC 9 cut(s) 7, 75, 109, 149, 228, 1190, 1282, 1471, 1589
Bme1390I CCNGG 4 cut(s) 62, 1370, 1440, 1684
Bme18I GGWCC 2 cut(s) 251, 323
BmgT120I GGNCC 3 cut(s) 75, 251, 323
BmiI GGNNCC 5 cut(s) 252, 253, 687, 1421, 1455
BmrFI CCNGG 4 cut(s) 62, 1370, 1440, 1684
BmrI ACTGGG 1 cut(s) 1334
BmsI GCATC 6 cut(s) 17, 850, 886, 963, 1282, 1574
BmuI ACTGGG 1 cut(s) 1334
BpiI GAAGAC 1 cut(s) 1608
BpmI CTGGAG 3 cut(s) 44, 136, 1631
BpuEI CTTGAG 2 cut(s) 1142, 1460
BpuMI CCSGG 1 cut(s) 1684
Bsa29I ATCGAT 1 cut(s) 1290
BsaAI YACGTR 1 cut(s) 1658
BsaJI CCNNGG 3 cut(s) 61, 1368, 1369
BsaWI WCCGGW 2 cut(s) 823, 991
Bsc4I CCNNNNNNNGG 4 cut(s) 247, 1187, 1204, 1537
Bse118I RCCGGY 1 cut(s) 1019
Bse1I ACTGG 4 cut(s) 153, 297, 631, 1340
BseBI CCWGG 3 cut(s) 62, 1370, 1440
BseCI ATCGAT 1 cut(s) 1290
BseDI CCNNGG 3 cut(s) 61, 1368, 1369
BseGI GGATG 4 cut(s) 912, 1357, 1364, 1628
BseLI CCNNNNNNNGG 4 cut(s) 247, 1187, 1204, 1537
BseMII CTCAG 1 cut(s) 320
BseNI ACTGG 4 cut(s) 153, 297, 631, 1340
BseRI GAGGAG 1 cut(s) 183
BseXI GCAGC 5 cut(s) 159, 238, 1267, 1456, 1599
BsgI GTGCAG 3 cut(s) 71, 227, 1455
Bsh1236I CGCG 2 cut(s) 107, 1557
BshFI GGCC 2 cut(s) 76, 1191
BshNI GGYRCC 1 cut(s) 1453
BshVI ATCGAT 1 cut(s) 1290
BsiHKAI GWGCWC 2 cut(s) 544, 984
BsiSI CCGG 5 cut(s) 824, 992, 1020, 1131, 1684
BslFI GGGAC 1 cut(s) 237
BslI CCNNNNNNNGG 4 cut(s) 247, 1187, 1204, 1537
BsmAI GTCTC 3 cut(s) 402, 652, 821
BsmBI CGTCTC 1 cut(s) 402
BsmFI GGGAC 1 cut(s) 237
BsmI GAATGC 2 cut(s) 1190, 1228
BsnI GGCC 2 cut(s) 76, 1191
Bsp1286I GDGCHC 2 cut(s) 544, 984
Bsp143I GATC 9 cut(s) 385, 583, 631, 933, 1031, 1150, 1442, 1507, 1596
BspACI CCGC 6 cut(s) 5, 73, 107, 976, 1188, 1555
BspANI GGCC 2 cut(s) 76, 1191
BspCNI CTCAG 1 cut(s) 321
BspDI ATCGAT 1 cut(s) 1290
BspFNI CGCG 2 cut(s) 107, 1557
BspLI GGNNCC 5 cut(s) 252, 253, 687, 1421, 1455
BspMAI CTGCAG 1 cut(s) 1589
BspMI ACCTGC 1 cut(s) 1014
BspPI GGATC 5 cut(s) 578, 941, 1039, 1450, 1515
BspQI GCTCTTC 1 cut(s) 1009
BspT107I GGYRCC 1 cut(s) 1453
BspTI CTTAAG 1 cut(s) 1448
BsrFI RCCGGY 1 cut(s) 1019
BsrI ACTGG 4 cut(s) 153, 297, 631, 1340
BssAI RCCGGY 1 cut(s) 1019
BssECI CCNNGG 3 cut(s) 61, 1368, 1369
BssMI GATC 9 cut(s) 385, 583, 631, 933, 1031, 1150, 1442, 1507, 1596
BssSI CACGAG 2 cut(s) 537, 884
Bst2BI CACGAG 2 cut(s) 537, 884
Bst2UI CCWGG 3 cut(s) 62, 1370, 1440
Bst4CI ACNGT 8 cut(s) 141, 320, 360, 445, 781, 988, 1259, 1698
Bst6I CTCTTC 1 cut(s) 1009
BstAFI CTTAAG 1 cut(s) 1448
BstBAI YACGTR 1 cut(s) 1658
BstC8I GCNNGC 4 cut(s) 865, 1021, 1559, 1563
BstDEI CTNAG 1 cut(s) 329
BstF5I GGATG 4 cut(s) 912, 1357, 1364, 1628
BstFNI CGCG 2 cut(s) 107, 1557
BstHHI GCGC 1 cut(s) 231
BstKTI GATC 9 cut(s) 388, 586, 634, 936, 1034, 1153, 1445, 1510, 1599
BstMAI GTCTC 3 cut(s) 402, 652, 821
BstMBI GATC 9 cut(s) 385, 583, 631, 933, 1031, 1150, 1442, 1507, 1596
BstMWI GCNNNNNNNGC 3 cut(s) 51, 896, 1016
BstNI CCWGG 3 cut(s) 62, 1370, 1440
BstNSI RCATGY 1 cut(s) 1594
BstSCI CCNGG 4 cut(s) 60, 1368, 1438, 1682
BstSFI CTRYAG 1 cut(s) 1585
BstUI CGCG 2 cut(s) 107, 1557
BstV1I GCAGC 5 cut(s) 159, 238, 1267, 1456, 1599
BstV2I GAAGAC 1 cut(s) 1608
BstX2I RGATCY 2 cut(s) 583, 1507
BstXI CCANNNNNNTGG 1 cut(s) 907
BstYI RGATCY 2 cut(s) 583, 1507
Bsu15I ATCGAT 1 cut(s) 1290
BsuI GTATCC 1 cut(s) 216
BsuRI GGCC 2 cut(s) 76, 1191
BsuTUI ATCGAT 1 cut(s) 1290
BtgZI GCGATG 1 cut(s) 1080
BtsCI GGATG 4 cut(s) 912, 1357, 1364, 1628
BtsI GCAGTG 1 cut(s) 874
BtsIMutI CAGTG 3 cut(s) 160, 874, 984
BveI ACCTGC 1 cut(s) 1014
Cac8I GCNNGC 4 cut(s) 865, 1021, 1559, 1563
CaiI CAGNNNCTG 2 cut(s) 593, 1375
CfoI GCGC 1 cut(s) 231
Cfr10I RCCGGY 1 cut(s) 1019
Cfr13I GGNCC 3 cut(s) 75, 251, 323
ClaI ATCGAT 1 cut(s) 1290
CseI GACGC 1 cut(s) 1387
Csp6I GTAC 7 cut(s) 159, 274, 989, 1321, 1454, 1659, 1699
CviAII CATG 6 cut(s) 247, 635, 850, 1313, 1348, 1591
CviQI GTAC 7 cut(s) 159, 274, 989, 1321, 1454, 1659, 1699
DdeI CTNAG 1 cut(s) 329
DpnI GATC 9 cut(s) 387, 585, 633, 935, 1033, 1152, 1444, 1509, 1598
DpnII GATC 9 cut(s) 385, 583, 631, 933, 1031, 1150, 1442, 1507, 1596
DraI TTTAAA 1 cut(s) 1065
Eam1104I CTCTTC 1 cut(s) 1009
EarI CTCTTC 1 cut(s) 1009
Ecl136II GAGCTC 2 cut(s) 542, 982
Eco24I GRGCYC 2 cut(s) 544, 984
Eco47I GGWCC 2 cut(s) 251, 323
Eco53kI GAGCTC 2 cut(s) 542, 982
Eco57I CTGAAG 1 cut(s) 305
EcoICRI GAGCTC 2 cut(s) 542, 982
EcoO109I RGGNCCY 1 cut(s) 251
EcoRII CCWGG 3 cut(s) 60, 1368, 1438
EcoT38I GRGCYC 2 cut(s) 544, 984
Esp3I CGTCTC 1 cut(s) 402
FaeI CATG 6 cut(s) 250, 638, 853, 1316, 1351, 1594
FaqI GGGAC 1 cut(s) 237
FatI CATG 6 cut(s) 246, 634, 849, 1312, 1347, 1590
FauI CCCGC 1 cut(s) 969
FbaI TGATCA 1 cut(s) 631
Fnu4HI GCNGC 9 cut(s) 6, 74, 108, 148, 227, 1189, 1281, 1470, 1588
FokI GGATG 4 cut(s) 919, 1351, 1364, 1635
FriOI GRGCYC 2 cut(s) 544, 984
Fsp4HI GCNGC 9 cut(s) 6, 74, 108, 148, 227, 1189, 1281, 1470, 1588
FspBI CTAG 2 cut(s) 891, 1100
GlaI GCGC 1 cut(s) 230
GluI GCNGC 9 cut(s) 6, 74, 108, 148, 227, 1189, 1281, 1470, 1588
GsuI CTGGAG 3 cut(s) 44, 136, 1631
HaeIII GGCC 2 cut(s) 76, 1191
HapII CCGG 5 cut(s) 824, 992, 1020, 1131, 1684
HgaI GACGC 1 cut(s) 1387
HhaI GCGC 1 cut(s) 231
Hin1II CATG 6 cut(s) 250, 638, 853, 1316, 1351, 1594
Hin6I GCGC 1 cut(s) 229
HinP1I GCGC 1 cut(s) 229
HincII GTYRAC 1 cut(s) 1345
HindII GTYRAC 1 cut(s) 1345
HinfI GANTC 6 cut(s) 296, 829, 1103, 1117, 1487, 1541
HpaII CCGG 5 cut(s) 824, 992, 1020, 1131, 1684
HphI GGTGA 3 cut(s) 563, 641, 1061
Hpy166II GTNNAC 3 cut(s) 646, 1175, 1345
Hpy188I TCNGA 8 cut(s) 285, 330, 501, 921, 1116, 1237, 1377, 1532
Hpy188III TCNNGA 8 cut(s) 24, 309, 608, 904, 1121, 1205, 1550, 1610
Hpy8I GTNNAC 3 cut(s) 646, 1175, 1345
HpyAV CCTTC 2 cut(s) 94, 676
HpyCH4III ACNGT 8 cut(s) 141, 320, 360, 445, 781, 988, 1259, 1698
HpyCH4IV ACGT 4 cut(s) 272, 1171, 1515, 1657
HpyF10VI GCNNNNNNNGC 3 cut(s) 51, 896, 1016
HpyF3I CTNAG 1 cut(s) 329
HpySE526I ACGT 4 cut(s) 272, 1171, 1515, 1657
Hsp92II CATG 6 cut(s) 250, 638, 853, 1316, 1351, 1594
HspAI GCGC 1 cut(s) 229
KflI GGGWCCC 1 cut(s) 251
KpnI GGTACC 1 cut(s) 1457
KroI GCCGGC 1 cut(s) 1019
KroNI GCCGGC 1 cut(s) 1021
Ksp22I TGATCA 1 cut(s) 631
Kzo9I GATC 9 cut(s) 385, 583, 631, 933, 1031, 1150, 1442, 1507, 1596
LguI GCTCTTC 1 cut(s) 1009
LmnI GCTCC 4 cut(s) 155, 979, 1425, 1480
Lsp1109I GCAGC 5 cut(s) 159, 238, 1267, 1456, 1599
LweI GCATC 6 cut(s) 17, 850, 886, 963, 1282, 1574
MaeI CTAG 2 cut(s) 891, 1100
MaeII ACGT 4 cut(s) 272, 1171, 1515, 1657
MaeIII GTNAC 5 cut(s) 439, 460, 622, 730, 1054
MalI GATC 9 cut(s) 387, 585, 633, 935, 1033, 1152, 1444, 1509, 1598
MboI GATC 9 cut(s) 385, 583, 631, 933, 1031, 1150, 1442, 1507, 1596
MboII GAAGA 4 cut(s) 39, 1026, 1274, 1613
MflI RGATCY 2 cut(s) 583, 1507
MhlI GDGCHC 2 cut(s) 544, 984
MlyI GAGTC 2 cut(s) 823, 1111
MmeI TCCRAC 1 cut(s) 1139
MroNI GCCGGC 1 cut(s) 1019
MroXI GAANNNNTTC 4 cut(s) 31, 1491, 1545, 1605
MseI TTAA 7 cut(s) 117, 617, 761, 855, 915, 1064, 1449
MslI CAYNNNNRTG 3 cut(s) 576, 651, 905
MspCI CTTAAG 1 cut(s) 1448
MspI CCGG 5 cut(s) 824, 992, 1020, 1131, 1684
MspR9I CCNGG 4 cut(s) 62, 1370, 1440, 1684
Mva1269I GAATGC 2 cut(s) 1190, 1228
MvaI CCWGG 3 cut(s) 62, 1370, 1440
MvnI CGCG 2 cut(s) 107, 1557
MwoI GCNNNNNNNGC 3 cut(s) 51, 896, 1016
NaeI GCCGGC 1 cut(s) 1021
NciI CCSGG 1 cut(s) 1684
NdeII GATC 9 cut(s) 385, 583, 631, 933, 1031, 1150, 1442, 1507, 1596
NgoMIV GCCGGC 1 cut(s) 1019
NlaIII CATG 6 cut(s) 250, 638, 853, 1316, 1351, 1594
NlaIV GGNNCC 5 cut(s) 252, 253, 687, 1421, 1455
NmeAIII GCCGAG 1 cut(s) 1659
NmuCI GTSAC 2 cut(s) 439, 1054
NspI RCATGY 1 cut(s) 1594
OliI CACNNNNGTG 1 cut(s) 576
PasI CCCWGGG 1 cut(s) 1369
PciSI GCTCTTC 1 cut(s) 1009
PctI GAATGC 2 cut(s) 1190, 1228
PdiI GCCGGC 1 cut(s) 1021
PdmI GAANNNNTTC 4 cut(s) 31, 1491, 1545, 1605
PfeI GAWTC 4 cut(s) 296, 1103, 1487, 1541
PflMI CCANNNNNTGG 1 cut(s) 1204
PfoI TCCNGGA 1 cut(s) 1682
PkrI GCNGC 9 cut(s) 7, 75, 109, 149, 228, 1190, 1282, 1471, 1589
PleI GAGTC 2 cut(s) 823, 1111
PpsI GAGTC 2 cut(s) 823, 1111
Ppu21I YACGTR 1 cut(s) 1658
PpuMI RGGWCCY 1 cut(s) 251
PshBI ATTAAT 1 cut(s) 117
Psp124BI GAGCTC 2 cut(s) 544, 984
Psp5II RGGWCCY 1 cut(s) 251
Psp6I CCWGG 3 cut(s) 60, 1368, 1438
PspGI CCWGG 3 cut(s) 60, 1368, 1438
PspN4I GGNNCC 5 cut(s) 252, 253, 687, 1421, 1455
PspPI GGNCC 3 cut(s) 75, 251, 323
PspPPI RGGWCCY 1 cut(s) 251
PstI CTGCAG 1 cut(s) 1589
PstNI CAGNNNCTG 2 cut(s) 593, 1375
PsuI RGATCY 2 cut(s) 583, 1507
RsaI GTAC 7 cut(s) 160, 275, 990, 1322, 1455, 1660, 1700
RsaNI GTAC 7 cut(s) 159, 274, 989, 1321, 1454, 1659, 1699
RseI CAYNNNNRTG 3 cut(s) 576, 651, 905
SacI GAGCTC 2 cut(s) 544, 984
SapI GCTCTTC 1 cut(s) 1009
SaqAI TTAA 7 cut(s) 117, 617, 761, 855, 915, 1064, 1449
SatI GCNGC 9 cut(s) 6, 74, 108, 148, 227, 1189, 1281, 1470, 1588
Sau3AI GATC 9 cut(s) 385, 583, 631, 933, 1031, 1150, 1442, 1507, 1596
Sau96I GGNCC 3 cut(s) 75, 251, 323
SchI GAGTC 2 cut(s) 823, 1111
ScrFI CCNGG 4 cut(s) 62, 1370, 1440, 1684
SduI GDGCHC 2 cut(s) 544, 984
SfaNI GCATC 6 cut(s) 17, 850, 886, 963, 1282, 1574
SfcI CTRYAG 1 cut(s) 1585
SinI GGWCC 2 cut(s) 251, 323
SmiMI CAYNNNNRTG 3 cut(s) 576, 651, 905
SmlI CTYRAG 3 cut(s) 1121, 1448, 1475
SmoI CTYRAG 3 cut(s) 1121, 1448, 1475
SsiI CCGC 6 cut(s) 5, 73, 107, 976, 1188, 1555
SspI AATATT 2 cut(s) 615, 1431
SspMI CTAG 2 cut(s) 891, 1100
SstI GAGCTC 2 cut(s) 544, 984
StyD4I CCNGG 4 cut(s) 60, 1368, 1438, 1682
TaaI ACNGT 8 cut(s) 141, 320, 360, 445, 781, 988, 1259, 1698
TaiI ACGT 4 cut(s) 275, 1174, 1518, 1660
TaqI TCGA 4 cut(s) 217, 832, 1290, 1599
TauI GCSGC 4 cut(s) 8, 76, 110, 1191
TfiI GAWTC 4 cut(s) 296, 1103, 1487, 1541
Tru1I TTAA 7 cut(s) 117, 617, 761, 855, 915, 1064, 1449
Tru9I TTAA 7 cut(s) 117, 617, 761, 855, 915, 1064, 1449
TscAI CASTG 3 cut(s) 160, 874, 991
TseFI GTSAC 2 cut(s) 439, 1054
TseI GCWGC 5 cut(s) 147, 226, 1280, 1469, 1587
Tsp45I GTSAC 2 cut(s) 439, 1054
TspDTI ATGAA 8 cut(s) 24, 507, 579, 695, 968, 1079, 1083, 1353
TspGWI ACGGA 3 cut(s) 946, 1412, 1478
TspRI CASTG 3 cut(s) 160, 874, 991
Van91I CCANNNNNTGG 1 cut(s) 1204
Vha464I CTTAAG 1 cut(s) 1448
VpaK11BI GGWCC 2 cut(s) 251, 323
VspI ATTAAT 1 cut(s) 117
XapI RAATTY 6 cut(s) 30, 495, 956, 1037, 1200, 1359
XceI RCATGY 1 cut(s) 1594
XmnI GAANNNNTTC 4 cut(s) 31, 1491, 1545, 1605
XspI CTAG 2 cut(s) 891, 1100
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.