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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G43310 AT5G43310 AT5G43310 AT5G43310 AT5G43310 |
| fragaria_vesca | FvH4_4g03880 FvH4_4g03880 FvH4_4g03880 FvH4_4g03880 FvH4_4g03880 |
| malus_domestica | MD13G1215700.v1.1 MD16G1220700.v1.1 |
| prunus_persica | Prupe.1G041100_v2.0.a1 Prupe.1G041100_v2.0.a1 Prupe.1G041100_v2.0.a1 |
| pyrus_communis | pycom13g18900 pycom16g18510 |
| rosa_chinensis | RchiOBHm_Chr4g0393911 |
| rosa_laevigata | RLG00000009728 |
| rosa_multiflora | Rmu_sc0000928.1_g000035 |
| rosa_roxburghii | Rroxscaffold_5G00338980 |
| rosa_rugosa | Rorug03G0371100.1 |
| rosa_samantha | Rh4AG049400 Rh4BG045800 Rh4CG052900 Rh4DG046400 |
| rosa_wichuraiana | Rw4G003910 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 584, 3001 |
| AccB1I | GGYRCC | 2 cut(s) | 458, 3268 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 3686 |
| AccBSI | CCGCTC | 2 cut(s) | 29, 1227 |
| AccI | GTMKAC | 2 cut(s) | 3300, 3752 |
| AccII | CGCG | 1 cut(s) | 538 |
| AciI | CCGC | 5 cut(s) | 27, 486, 923, 1225, 3335 |
| AclWI | GGATC | 8 cut(s) | 1061, 1074, 1583, 1740, 1868, 2575, 2602, 3449 |
| AcoI | YGGCCR | 3 cut(s) | 159, 712, 1753 |
| AcsI | RAATTY | 6 cut(s) | 502, 1293, 1480, 2257, 2573, 3196 |
| AcuI | CTGAAG | 7 cut(s) | 290, 759, 1284, 2375, 2832, 3098, 3726 |
| AdeI | CACNNNGTG | 1 cut(s) | 2555 |
| AfaI | GTAC | 8 cut(s) | 229, 284, 951, 1639, 2116, 3180, 3463, 3479 |
| AflIII | ACRYGT | 1 cut(s) | 277 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 403, 435, 891, 923, 2277, 2309 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2015, 2047 |
| Alw21I | GWGCWC | 5 cut(s) | 260, 879, 2356, 2560, 3073 |
| Alw26I | GTCTC | 3 cut(s) | 527, 701, 753 |
| AlwI | GGATC | 8 cut(s) | 1061, 1074, 1583, 1740, 1868, 2575, 2602, 3449 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 3587 |
| Ama87I | CYCGRG | 2 cut(s) | 185, 191 |
| ApeKI | GCWGC | 9 cut(s) | 209, 488, 550, 590, 734, 2164, 2471, 2951, 3331 |
| ApoI | RAATTY | 6 cut(s) | 502, 1293, 1480, 2257, 2573, 3196 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 3207, 3239 |
| AseI | ATTAAT | 2 cut(s) | 623, 1269 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 906, 3312 |
| AspLEI | GCGC | 1 cut(s) | 540 |
| AspS9I | GGNCC | 7 cut(s) | 1031, 1552, 1723, 2300, 2990, 3185, 3352 |
| AsuC2I | CCSGG | 2 cut(s) | 52, 960 |
| AsuHPI | GGTGA | 8 cut(s) | 1270, 1709, 1857, 2227, 2493, 2541, 3270, 3686 |
| AsuNHI | GCTAGC | 1 cut(s) | 2954 |
| AvaI | CYCGRG | 2 cut(s) | 185, 191 |
| AvaII | GGWCC | 4 cut(s) | 1031, 1552, 2990, 3185 |
| BaeGI | GKGCMC | 2 cut(s) | 463, 3271 |
| BalI | TGGCCA | 3 cut(s) | 161, 714, 1755 |
| BamHI | GGATCC | 1 cut(s) | 1066 |
| BanI | GGYRCC | 2 cut(s) | 458, 3268 |
| BanII | GRGCYC | 1 cut(s) | 192 |
| BauI | CACGAG | 3 cut(s) | 579, 2349, 2355 |
| BbsI | GAAGAC | 3 cut(s) | 146, 1512, 3435 |
| Bbv12I | GWGCWC | 5 cut(s) | 260, 879, 2356, 2560, 3073 |
| BbvI | GCAGC | 9 cut(s) | 221, 475, 537, 602, 746, 2176, 2458, 2938, 3343 |
| BceAI | ACGGC | 2 cut(s) | 3540, 3647 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1862, 1896 |
| BciVI | GTATCC | 1 cut(s) | 3556 |
| BclI | TGATCA | 1 cut(s) | 607 |
| BcnI | CCSGG | 2 cut(s) | 52, 960 |
| BcoDI | GTCTC | 3 cut(s) | 527, 701, 753 |
| BfmI | CTRYAG | 6 cut(s) | 360, 551, 585, 1358, 1419, 1798 |
| BfuAI | ACCTGC | 2 cut(s) | 584, 3001 |
| BfuI | GTATCC | 1 cut(s) | 3556 |
| BglII | AGATCT | 1 cut(s) | 2240 |
| BmcAI | AGTACT | 1 cut(s) | 229 |
| Bme18I | GGWCC | 4 cut(s) | 1031, 1552, 2990, 3185 |
| BmeT110I | CYCGRG | 2 cut(s) | 185, 191 |
| BmgT120I | GGNCC | 7 cut(s) | 1031, 1552, 1723, 2300, 2990, 3185, 3352 |
| BmiI | GGNNCC | 8 cut(s) | 460, 484, 1068, 2301, 2618, 2991, 3270, 3612 |
| BmrI | ACTGGG | 1 cut(s) | 3122 |
| BmsI | GCATC | 9 cut(s) | 196, 655, 788, 934, 1486, 2496, 2642, 2900, 3141 |
| BmtI | GCTAGC | 1 cut(s) | 2958 |
| BmuI | ACTGGG | 1 cut(s) | 3122 |
| BpiI | GAAGAC | 3 cut(s) | 146, 1512, 3435 |
| BpmI | CTGGAG | 1 cut(s) | 3084 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1228 |
| BpuEI | CTTGAG | 3 cut(s) | 551, 3176, 3759 |
| BpuMI | CCSGG | 2 cut(s) | 52, 960 |
| BsaBI | GATNNNNATC | 3 cut(s) | 606, 1353, 2599 |
| BsaWI | WCCGGW | 1 cut(s) | 262 |
| Bse3DI | GCAATG | 4 cut(s) | 750, 1522, 2504, 2735 |
| Bse8I | GATNNNNATC | 3 cut(s) | 606, 1353, 2599 |
| BseGI | GGATG | 8 cut(s) | 670, 1123, 1369, 1591, 2047, 2215, 2487, 2981 |
| BseJI | GATNNNNATC | 3 cut(s) | 606, 1353, 2599 |
| BseMI | GCAATG | 4 cut(s) | 750, 1522, 2504, 2735 |
| BseRI | GAGGAG | 3 cut(s) | 329, 771, 2595 |
| BseSI | GKGCMC | 2 cut(s) | 463, 3271 |
| BseXI | GCAGC | 9 cut(s) | 221, 475, 537, 602, 746, 2176, 2458, 2938, 3343 |
| BseYI | CCCAGC | 2 cut(s) | 2106, 2491 |
| BsgI | GTGCAG | 1 cut(s) | 474 |
| Bsh1236I | CGCG | 1 cut(s) | 538 |
| BshNI | GGYRCC | 2 cut(s) | 458, 3268 |
| BsiHKAI | GWGCWC | 5 cut(s) | 260, 879, 2356, 2560, 3073 |
| BsiHKCI | CYCGRG | 2 cut(s) | 185, 191 |
| BsiSI | CCGG | 4 cut(s) | 52, 198, 263, 959 |
| BslFI | GGGAC | 5 cut(s) | 1110, 1472, 3003, 3228, 3820 |
| BsmAI | GTCTC | 3 cut(s) | 527, 701, 753 |
| BsmBI | CGTCTC | 1 cut(s) | 527 |
| BsmFI | GGGAC | 5 cut(s) | 1110, 1472, 3003, 3228, 3820 |
| BsmI | GAATGC | 3 cut(s) | 644, 781, 1108 |
| BsoBI | CYCGRG | 2 cut(s) | 185, 191 |
| Bsp1286I | GDGCHC | 8 cut(s) | 192, 260, 463, 879, 2356, 2560, 3073, 3271 |
| Bsp1407I | TGTACA | 2 cut(s) | 949, 3178 |
| Bsp19I | CCATGG | 2 cut(s) | 1113, 1579 |
| BspACI | CCGC | 5 cut(s) | 27, 486, 923, 1225, 3335 |
| BspFNI | CGCG | 1 cut(s) | 538 |
| BspHI | TCATGA | 2 cut(s) | 340, 373 |
| BspLI | GGNNCC | 8 cut(s) | 460, 484, 1068, 2301, 2618, 2991, 3270, 3612 |
| BspMAI | CTGCAG | 2 cut(s) | 555, 1362 |
| BspMI | ACCTGC | 2 cut(s) | 584, 3001 |
| BspOI | GCTAGC | 1 cut(s) | 2958 |
| BspPI | GGATC | 8 cut(s) | 1061, 1074, 1583, 1740, 1868, 2575, 2602, 3449 |
| BspT107I | GGYRCC | 2 cut(s) | 458, 3268 |
| BsrBI | CCGCTC | 2 cut(s) | 29, 1227 |
| BsrDI | GCAATG | 4 cut(s) | 750, 1522, 2504, 2735 |
| BsrGI | TGTACA | 2 cut(s) | 949, 3178 |
| BssNAI | GTATAC | 1 cut(s) | 3753 |
| BssSI | CACGAG | 3 cut(s) | 579, 2349, 2355 |
| BssT1I | CCWWGG | 8 cut(s) | 162, 870, 1070, 1113, 1525, 1579, 2612, 2985 |
| Bst1107I | GTATAC | 1 cut(s) | 3753 |
| Bst2BI | CACGAG | 3 cut(s) | 579, 2349, 2355 |
| Bst6I | CTCTTC | 5 cut(s) | 423, 1335, 2415, 3074, 3799 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1000 |
| BstAUI | TGTACA | 2 cut(s) | 949, 3178 |
| BstC8I | GCNNGC | 5 cut(s) | 1001, 1470, 1679, 2065, 2956 |
| BstDSI | CCRYGG | 2 cut(s) | 1113, 1579 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3433 |
| BstF5I | GGATG | 8 cut(s) | 670, 1123, 1369, 1591, 2047, 2215, 2487, 2981 |
| BstFNI | CGCG | 1 cut(s) | 538 |
| BstHHI | GCGC | 1 cut(s) | 540 |
| BstMAI | GTCTC | 3 cut(s) | 527, 701, 753 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 255, 559, 590, 740, 1000, 2515, 3160, 3328 |
| BstNSI | RCATGY | 4 cut(s) | 1003, 1534, 1681, 3522 |
| BstSFI | CTRYAG | 6 cut(s) | 360, 551, 585, 1358, 1419, 1798 |
| BstSLI | GKGCMC | 2 cut(s) | 463, 3271 |
| BstUI | CGCG | 1 cut(s) | 538 |
| BstV1I | GCAGC | 9 cut(s) | 221, 475, 537, 602, 746, 2176, 2458, 2938, 3343 |
| BstV2I | GAAGAC | 3 cut(s) | 146, 1512, 3435 |
| BstX2I | RGATCY | 3 cut(s) | 1066, 2240, 3454 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2177 |
| BstYI | RGATCY | 3 cut(s) | 1066, 2240, 3454 |
| BstZ17I | GTATAC | 1 cut(s) | 3753 |
| BsuI | GTATCC | 1 cut(s) | 3556 |
| BtgI | CCRYGG | 2 cut(s) | 1113, 1579 |
| BtsCI | GGATG | 8 cut(s) | 670, 1123, 1369, 1591, 2047, 2215, 2487, 2981 |
| BtsI | GCAGTG | 2 cut(s) | 208, 2005 |
| BtsIMutI | CAGTG | 7 cut(s) | 208, 2005, 2760, 2865, 3054, 3446, 3729 |
| BveI | ACCTGC | 2 cut(s) | 584, 3001 |
| Cac8I | GCNNGC | 5 cut(s) | 1001, 1470, 1679, 2065, 2956 |
| CaiI | CAGNNNCTG | 1 cut(s) | 3587 |
| CciI | TCATGA | 2 cut(s) | 340, 373 |
| CfoI | GCGC | 1 cut(s) | 540 |
| Cfr13I | GGNCC | 7 cut(s) | 1031, 1552, 1723, 2300, 2990, 3185, 3352 |
| CseI | GACGC | 2 cut(s) | 544, 1169 |
| CsiI | ACCWGGT | 1 cut(s) | 66 |
| Csp6I | GTAC | 8 cut(s) | 228, 283, 950, 1638, 2115, 3179, 3462, 3478 |
| CspCI | CAANNNNNGTGG | 1 cut(s) | 36 |
| CviQI | GTAC | 8 cut(s) | 228, 283, 950, 1638, 2115, 3179, 3462, 3478 |
| DraI | TTTAAA | 3 cut(s) | 2380, 2445, 3639 |
| DraIII | CACNNNGTG | 1 cut(s) | 2555 |
| EaeI | YGGCCR | 3 cut(s) | 159, 712, 1753 |
| Eam1104I | CTCTTC | 5 cut(s) | 423, 1335, 2415, 3074, 3799 |
| EarI | CTCTTC | 5 cut(s) | 423, 1335, 2415, 3074, 3799 |
| Eco130I | CCWWGG | 8 cut(s) | 162, 870, 1070, 1113, 1525, 1579, 2612, 2985 |
| Eco147I | AGGCCT | 1 cut(s) | 1472 |
| Eco24I | GRGCYC | 1 cut(s) | 192 |
| Eco32I | GATATC | 2 cut(s) | 1648, 3771 |
| Eco47I | GGWCC | 4 cut(s) | 1031, 1552, 2990, 3185 |
| Eco57I | CTGAAG | 7 cut(s) | 290, 759, 1284, 2375, 2832, 3098, 3726 |
| Eco88I | CYCGRG | 2 cut(s) | 185, 191 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3433 |
| EcoO109I | RGGNCCY | 2 cut(s) | 2990, 3352 |
| EcoRI | GAATTC | 2 cut(s) | 502, 2257 |
| EcoRV | GATATC | 2 cut(s) | 1648, 3771 |
| EcoT14I | CCWWGG | 8 cut(s) | 162, 870, 1070, 1113, 1525, 1579, 2612, 2985 |
| EcoT22I | ATGCAT | 1 cut(s) | 781 |
| EcoT38I | GRGCYC | 1 cut(s) | 192 |
| ErhI | CCWWGG | 8 cut(s) | 162, 870, 1070, 1113, 1525, 1579, 2612, 2985 |
| Esp3I | CGTCTC | 1 cut(s) | 527 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 501, 533, 854, 886, 2373, 2405 |
| FaqI | GGGAC | 5 cut(s) | 1110, 1472, 3003, 3228, 3820 |
| FauNDI | CATATG | 1 cut(s) | 3541 |
| FbaI | TGATCA | 1 cut(s) | 607 |
| FblI | GTMKAC | 2 cut(s) | 3300, 3752 |
| FokI | GGATG | 8 cut(s) | 677, 1130, 1376, 1598, 2054, 2222, 2474, 2968 |
| FriOI | GRGCYC | 1 cut(s) | 192 |
| GlaI | GCGC | 1 cut(s) | 539 |
| GsaI | CCCAGC | 2 cut(s) | 2110, 2495 |
| GsuI | CTGGAG | 1 cut(s) | 3084 |
| HapII | CCGG | 4 cut(s) | 52, 198, 263, 959 |
| HgaI | GACGC | 2 cut(s) | 544, 1169 |
| HhaI | GCGC | 1 cut(s) | 540 |
| Hin6I | GCGC | 1 cut(s) | 538 |
| HinP1I | GCGC | 1 cut(s) | 538 |
| HincII | GTYRAC | 2 cut(s) | 1522, 3301 |
| HindII | GTYRAC | 2 cut(s) | 1522, 3301 |
| HindIII | AAGCTT | 2 cut(s) | 2374, 2439 |
| HpaII | CCGG | 4 cut(s) | 52, 198, 263, 959 |
| HphI | GGTGA | 8 cut(s) | 1270, 1709, 1857, 2227, 2493, 2541, 3270, 3686 |
| HpyAV | CCTTC | 8 cut(s) | 392, 1438, 1543, 1625, 2746, 3031, 3174, 3367 |
| HpyCH4IV | ACGT | 4 cut(s) | 277, 1768, 1969, 1989 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 255, 559, 590, 740, 1000, 2515, 3160, 3328 |
| HpySE526I | ACGT | 4 cut(s) | 277, 1768, 1969, 1989 |
| HspAI | GCGC | 1 cut(s) | 538 |
| Ksp22I | TGATCA | 1 cut(s) | 607 |
| LmnI | GCTCC | 4 cut(s) | 647, 874, 1153, 2172 |
| Lsp1109I | GCAGC | 9 cut(s) | 221, 475, 537, 602, 746, 2176, 2458, 2938, 3343 |
| LweI | GCATC | 9 cut(s) | 196, 655, 788, 934, 1486, 2496, 2642, 2900, 3141 |
| MabI | ACCWGGT | 1 cut(s) | 66 |
| MaeII | ACGT | 4 cut(s) | 277, 1768, 1969, 1989 |
| MbiI | CCGCTC | 2 cut(s) | 29, 1227 |
| MflI | RGATCY | 3 cut(s) | 1066, 2240, 3454 |
| MhlI | GDGCHC | 8 cut(s) | 192, 260, 463, 879, 2356, 2560, 3073, 3271 |
| MlsI | TGGCCA | 3 cut(s) | 161, 714, 1755 |
| MluNI | TGGCCA | 3 cut(s) | 161, 714, 1755 |
| MlyI | GAGTC | 6 cut(s) | 17, 203, 1322, 2018, 2341, 3560 |
| MmeI | TCCRAC | 4 cut(s) | 61, 1176, 1579, 1710 |
| Mox20I | TGGCCA | 3 cut(s) | 161, 714, 1755 |
| Mph1103I | ATGCAT | 1 cut(s) | 781 |
| MroXI | GAANNNNTTC | 2 cut(s) | 906, 3312 |
| MscI | TGGCCA | 3 cut(s) | 161, 714, 1755 |
| MslI | CAYNNNNRTG | 5 cut(s) | 1134, 1584, 2175, 2208, 3108 |
| Msp20I | TGGCCA | 3 cut(s) | 161, 714, 1755 |
| MspA1I | CMGCKG | 2 cut(s) | 488, 737 |
| MspI | CCGG | 4 cut(s) | 52, 198, 263, 959 |
| Mva1269I | GAATGC | 3 cut(s) | 644, 781, 1108 |
| MvnI | CGCG | 1 cut(s) | 538 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 255, 559, 590, 740, 1000, 2515, 3160, 3328 |
| NciI | CCSGG | 2 cut(s) | 52, 960 |
| NcoI | CCATGG | 2 cut(s) | 1113, 1579 |
| NdeI | CATATG | 1 cut(s) | 3541 |
| NheI | GCTAGC | 1 cut(s) | 2954 |
| NlaIV | GGNNCC | 8 cut(s) | 460, 484, 1068, 2301, 2618, 2991, 3270, 3612 |
| NmeAIII | GCCGAG | 1 cut(s) | 2681 |
| NmuCI | GTSAC | 5 cut(s) | 62, 1977, 2000, 2499, 2842 |
| NsiI | ATGCAT | 1 cut(s) | 781 |
| NspI | RCATGY | 4 cut(s) | 1003, 1534, 1681, 3522 |
| PaeI | GCATGC | 2 cut(s) | 1003, 1681 |
| PaeR7I | CTCGAG | 1 cut(s) | 185 |
| PagI | TCATGA | 2 cut(s) | 340, 373 |
| PceI | AGGCCT | 1 cut(s) | 1472 |
| PctI | GAATGC | 3 cut(s) | 644, 781, 1108 |
| PdmI | GAANNNNTTC | 2 cut(s) | 906, 3312 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 3686 |
| PleI | GAGTC | 6 cut(s) | 17, 202, 1322, 2018, 2340, 3559 |
| PpsI | GAGTC | 6 cut(s) | 17, 202, 1322, 2018, 2340, 3559 |
| PpuMI | RGGWCCY | 1 cut(s) | 2990 |
| PshBI | ATTAAT | 2 cut(s) | 623, 1269 |
| Psp5II | RGGWCCY | 1 cut(s) | 2990 |
| PspFI | CCCAGC | 2 cut(s) | 2106, 2491 |
| PspN4I | GGNNCC | 8 cut(s) | 460, 484, 1068, 2301, 2618, 2991, 3270, 3612 |
| PspPI | GGNCC | 7 cut(s) | 1031, 1552, 1723, 2300, 2990, 3185, 3352 |
| PspPPI | RGGWCCY | 1 cut(s) | 2990 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 3461, 3493 |
| PstI | CTGCAG | 2 cut(s) | 555, 1362 |
| PstNI | CAGNNNCTG | 1 cut(s) | 3587 |
| PsuI | RGATCY | 3 cut(s) | 1066, 2240, 3454 |
| PvuII | CAGCTG | 1 cut(s) | 737 |
| RsaI | GTAC | 8 cut(s) | 229, 284, 951, 1639, 2116, 3180, 3463, 3479 |
| RsaNI | GTAC | 8 cut(s) | 228, 283, 950, 1638, 2115, 3179, 3462, 3478 |
| RseI | CAYNNNNRTG | 5 cut(s) | 1134, 1584, 2175, 2208, 3108 |
| SalI | GTCGAC | 1 cut(s) | 3299 |
| Sau96I | GGNCC | 7 cut(s) | 1031, 1552, 1723, 2300, 2990, 3185, 3352 |
| ScaI | AGTACT | 1 cut(s) | 229 |
| SchI | GAGTC | 6 cut(s) | 17, 203, 1322, 2018, 2341, 3560 |
| SduI | GDGCHC | 8 cut(s) | 192, 260, 463, 879, 2356, 2560, 3073, 3271 |
| SexAI | ACCWGGT | 1 cut(s) | 66 |
| SfaNI | GCATC | 9 cut(s) | 196, 655, 788, 934, 1486, 2496, 2642, 2900, 3141 |
| SfcI | CTRYAG | 6 cut(s) | 360, 551, 585, 1358, 1419, 1798 |
| Sfr274I | CTCGAG | 1 cut(s) | 185 |
| SinI | GGWCC | 4 cut(s) | 1031, 1552, 2990, 3185 |
| SlaI | CTCGAG | 1 cut(s) | 185 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 1134, 1584, 2175, 2208, 3108 |
| SmlI | CTYRAG | 4 cut(s) | 185, 530, 3155, 3774 |
| SmoI | CTYRAG | 4 cut(s) | 185, 530, 3155, 3774 |
| SphI | GCATGC | 2 cut(s) | 1003, 1681 |
| SseBI | AGGCCT | 1 cut(s) | 1472 |
| SsiI | CCGC | 5 cut(s) | 27, 486, 923, 1225, 3335 |
| SspI | AATATT | 3 cut(s) | 905, 1267, 3223 |
| StuI | AGGCCT | 1 cut(s) | 1472 |
| StyI | CCWWGG | 8 cut(s) | 162, 870, 1070, 1113, 1525, 1579, 2612, 2985 |
| TaiI | ACGT | 4 cut(s) | 280, 1771, 1972, 1992 |
| TaqI | TCGA | 5 cut(s) | 186, 1166, 1609, 1896, 3300 |
| TatI | WGTACW | 6 cut(s) | 227, 282, 949, 1637, 3178, 3461 |
| TauI | GCSGC | 2 cut(s) | 1227, 3337 |
| TscAI | CASTG | 7 cut(s) | 208, 2005, 2767, 2872, 3054, 3453, 3736 |
| TseFI | GTSAC | 5 cut(s) | 62, 1977, 2000, 2499, 2842 |
| TseI | GCWGC | 9 cut(s) | 209, 488, 550, 590, 734, 2164, 2471, 2951, 3331 |
| Tsp45I | GTSAC | 5 cut(s) | 62, 1977, 2000, 2499, 2842 |
| TspGWI | ACGGA | 4 cut(s) | 111, 1320, 3157, 3495 |
| TspRI | CASTG | 7 cut(s) | 208, 2005, 2767, 2872, 3054, 3453, 3736 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 3686 |
| VpaK11BI | GGWCC | 4 cut(s) | 1031, 1552, 2990, 3185 |
| VspI | ATTAAT | 2 cut(s) | 623, 1269 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3433 |
| XapI | RAATTY | 6 cut(s) | 502, 1293, 1480, 2257, 2573, 3196 |
| XceI | RCATGY | 4 cut(s) | 1003, 1534, 1681, 3522 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2177, 2788 |
| XhoI | CTCGAG | 1 cut(s) | 185 |
| XmiI | GTMKAC | 2 cut(s) | 3300, 3752 |
| XmnI | GAANNNNTTC | 2 cut(s) | 906, 3312 |
| ZrmI | AGTACT | 1 cut(s) | 229 |
| Zsp2I | ATGCAT | 1 cut(s) | 781 |