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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G43310 AT5G43310 AT5G43310 AT5G43310 AT5G43310 |
| fragaria_vesca | FvH4_4g03880 FvH4_4g03880 FvH4_4g03880 FvH4_4g03880 FvH4_4g03880 |
| malus_domestica | MD13G1215700.v1.1 MD16G1220700.v1.1 |
| prunus_persica | Prupe.1G041100_v2.0.a1 Prupe.1G041100_v2.0.a1 Prupe.1G041100_v2.0.a1 |
| pyrus_communis | pycom13g18900 pycom16g18510 |
| rosa_chinensis | RchiOBHm_Chr4g0393911 |
| rosa_laevigata | RLG00000009728 |
| rosa_multiflora | Rmu_sc0000928.1_g000035 |
| rosa_roxburghii | Rroxscaffold_5G00338980 |
| rosa_rugosa | Rorug03G0371100.1 |
| rosa_samantha | Rh4AG049400 Rh4BG045800 Rh4CG052900 Rh4DG046400 |
| rosa_wichuraiana | Rw4G003910 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2472 |
| Acc16I | TGCGCA | 1 cut(s) | 147 |
| Acc36I | ACCTGC | 3 cut(s) | 2098, 3064, 3388 |
| AccB1I | GGYRCC | 2 cut(s) | 482, 3331 |
| AccBSI | CCGCTC | 1 cut(s) | 1251 |
| AccIII | TCCGGA | 1 cut(s) | 286 |
| AciI | CCGC | 6 cut(s) | 209, 510, 614, 1249, 3422, 3499 |
| AcoI | YGGCCR | 3 cut(s) | 159, 736, 1696 |
| AcsI | RAATTY | 7 cut(s) | 1302, 1318, 1370, 1423, 2636, 3259, 3532 |
| AcuI | CTGAAG | 7 cut(s) | 516, 783, 2004, 2318, 2895, 3161, 3801 |
| AfaI | GTAC | 6 cut(s) | 228, 308, 3163, 3243, 3466, 3526 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 196, 1019, 2054, 3125, 3670 |
| AflIII | ACRYGT | 1 cut(s) | 301 |
| AhlI | ACTAGT | 1 cut(s) | 3929 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 915, 947, 2220, 2252 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 1958, 1990, 3270, 3302 |
| Alw21I | GWGCWC | 5 cut(s) | 284, 903, 2299, 3074, 3136 |
| Alw26I | GTCTC | 2 cut(s) | 551, 725 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 3650 |
| Ama87I | CYCGRG | 1 cut(s) | 184 |
| Aor13HI | TCCGGA | 1 cut(s) | 286 |
| ApoI | RAATTY | 7 cut(s) | 1302, 1318, 1370, 1423, 2636, 3259, 3532 |
| AseI | ATTAAT | 1 cut(s) | 647 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 930, 1477, 3375 |
| AspLEI | GCGC | 1 cut(s) | 148 |
| AspS9I | GGNCC | 7 cut(s) | 118, 292, 1495, 1666, 2243, 3053, 3415 |
| AsuHPI | GGTGA | 9 cut(s) | 1652, 1800, 2170, 2556, 2604, 3333, 3679, 3749, 3761 |
| AsuNHI | GCTAGC | 1 cut(s) | 3017 |
| AvaI | CYCGRG | 1 cut(s) | 184 |
| AvaII | GGWCC | 4 cut(s) | 118, 292, 1495, 3053 |
| BaeGI | GKGCMC | 2 cut(s) | 487, 3334 |
| BalI | TGGCCA | 3 cut(s) | 161, 738, 1698 |
| BamHI | GGATCC | 1 cut(s) | 1090 |
| BanI | GGYRCC | 2 cut(s) | 482, 3331 |
| BauI | CACGAG | 3 cut(s) | 603, 2292, 2298 |
| BbsI | GAAGAC | 3 cut(s) | 146, 1455, 1992 |
| Bbv12I | GWGCWC | 5 cut(s) | 284, 903, 2299, 3074, 3136 |
| BceAI | ACGGC | 1 cut(s) | 3710 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1934, 1968 |
| BclI | TGATCA | 1 cut(s) | 631 |
| BcoDI | GTCTC | 2 cut(s) | 551, 725 |
| BcuI | ACTAGT | 1 cut(s) | 3929 |
| BfmI | CTRYAG | 8 cut(s) | 329, 384, 575, 609, 876, 1292, 1362, 1741 |
| BfuAI | ACCTGC | 3 cut(s) | 2098, 3064, 3388 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 167 |
| BmcAI | AGTACT | 2 cut(s) | 228, 3466 |
| Bme18I | GGWCC | 4 cut(s) | 118, 292, 1495, 3053 |
| BmeT110I | CYCGRG | 1 cut(s) | 184 |
| BmgT120I | GGNCC | 7 cut(s) | 118, 292, 1495, 1666, 2243, 3053, 3415 |
| BmiI | GGNNCC | 8 cut(s) | 120, 484, 508, 1092, 2244, 2681, 3054, 3333 |
| BmtI | GCTAGC | 1 cut(s) | 3021 |
| BpiI | GAAGAC | 3 cut(s) | 146, 1455, 1992 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 512, 544 |
| BpmI | CTGGAG | 5 cut(s) | 575, 966, 1328, 3147, 3273 |
| BpuEI | CTTGAG | 1 cut(s) | 3239 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1287, 2662, 3186 |
| BsaWI | WCCGGW | 2 cut(s) | 286, 2825 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 196, 1019, 2054, 3125, 3670 |
| Bse118I | RCCGGY | 2 cut(s) | 2543, 2784 |
| Bse3DI | GCAATG | 4 cut(s) | 774, 1465, 2197, 2798 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1287, 2662, 3186 |
| BseAI | TCCGGA | 1 cut(s) | 286 |
| BseGI | GGATG | 7 cut(s) | 694, 1147, 1303, 1534, 1811, 2550, 3044 |
| BseJI | GATNNNNATC | 3 cut(s) | 1287, 2662, 3186 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 196, 1019, 2054, 3125, 3670 |
| BseMI | GCAATG | 4 cut(s) | 774, 1465, 2197, 2798 |
| BseRI | GAGGAG | 3 cut(s) | 353, 536, 2658 |
| BseSI | GKGCMC | 2 cut(s) | 487, 3334 |
| BseYI | CCCAGC | 1 cut(s) | 2049 |
| BsgI | GTGCAG | 3 cut(s) | 498, 660, 2079 |
| BshNI | GGYRCC | 2 cut(s) | 482, 3331 |
| BsiHKAI | GWGCWC | 5 cut(s) | 284, 903, 2299, 3074, 3136 |
| BsiHKCI | CYCGRG | 1 cut(s) | 184 |
| BsiSI | CCGG | 5 cut(s) | 190, 287, 2544, 2785, 2826 |
| BslFI | GGGAC | 4 cut(s) | 1415, 3066, 3291, 3895 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 196, 1019, 2054, 3125, 3670 |
| BsmAI | GTCTC | 2 cut(s) | 551, 725 |
| BsmFI | GGGAC | 4 cut(s) | 1415, 3066, 3291, 3895 |
| BsmI | GAATGC | 3 cut(s) | 668, 805, 1132 |
| BsoBI | CYCGRG | 1 cut(s) | 184 |
| Bsp1286I | GDGCHC | 7 cut(s) | 284, 487, 903, 2299, 3074, 3136, 3334 |
| Bsp13I | TCCGGA | 1 cut(s) | 286 |
| Bsp1407I | TGTACA | 2 cut(s) | 306, 3241 |
| Bsp19I | CCATGG | 2 cut(s) | 1137, 3573 |
| BspACI | CCGC | 6 cut(s) | 209, 510, 614, 1249, 3422, 3499 |
| BspEI | TCCGGA | 1 cut(s) | 286 |
| BspHI | TCATGA | 3 cut(s) | 364, 3379, 3409 |
| BspLI | GGNNCC | 8 cut(s) | 120, 484, 508, 1092, 2244, 2681, 3054, 3333 |
| BspMAI | CTGCAG | 3 cut(s) | 579, 880, 1296 |
| BspMI | ACCTGC | 3 cut(s) | 2098, 3064, 3388 |
| BspOI | GCTAGC | 1 cut(s) | 3021 |
| BspT107I | GGYRCC | 2 cut(s) | 482, 3331 |
| BsrBI | CCGCTC | 1 cut(s) | 1251 |
| BsrDI | GCAATG | 4 cut(s) | 774, 1465, 2197, 2798 |
| BsrFI | RCCGGY | 2 cut(s) | 2543, 2784 |
| BsrGI | TGTACA | 2 cut(s) | 306, 3241 |
| BssAI | RCCGGY | 2 cut(s) | 2543, 2784 |
| BssSI | CACGAG | 3 cut(s) | 603, 2292, 2298 |
| BssT1I | CCWWGG | 7 cut(s) | 162, 894, 1137, 1468, 1522, 3048, 3573 |
| Bst2BI | CACGAG | 3 cut(s) | 603, 2292, 2298 |
| Bst6I | CTCTTC | 3 cut(s) | 447, 2478, 3137 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 254, 1024 |
| BstAUI | TGTACA | 2 cut(s) | 306, 3241 |
| BstC8I | GCNNGC | 8 cut(s) | 259, 679, 1025, 1413, 1622, 1845, 2401, 3019 |
| BstDSI | CCRYGG | 2 cut(s) | 1137, 3573 |
| BstF5I | GGATG | 7 cut(s) | 694, 1147, 1303, 1534, 1811, 2550, 3044 |
| BstHHI | GCGC | 1 cut(s) | 148 |
| BstMAI | GTCTC | 2 cut(s) | 551, 725 |
| BstNSI | RCATGY | 7 cut(s) | 261, 1027, 1624, 1847, 2407, 3248, 3287 |
| BstSFI | CTRYAG | 8 cut(s) | 329, 384, 575, 609, 876, 1292, 1362, 1741 |
| BstSLI | GKGCMC | 2 cut(s) | 487, 3334 |
| BstV2I | GAAGAC | 3 cut(s) | 146, 1455, 1992 |
| BstX2I | RGATCY | 2 cut(s) | 1090, 3517 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2768 |
| BstYI | RGATCY | 2 cut(s) | 1090, 3517 |
| BtgI | CCRYGG | 2 cut(s) | 1137, 3573 |
| BtsCI | GGATG | 7 cut(s) | 694, 1147, 1303, 1534, 1811, 2550, 3044 |
| BtsI | GCAGTG | 1 cut(s) | 207 |
| BtsIMutI | CAGTG | 8 cut(s) | 207, 441, 746, 1820, 2928, 3110, 3509, 3804 |
| BveI | ACCTGC | 3 cut(s) | 2098, 3064, 3388 |
| Cac8I | GCNNGC | 8 cut(s) | 259, 679, 1025, 1413, 1622, 1845, 2401, 3019 |
| CaiI | CAGNNNCTG | 1 cut(s) | 3650 |
| CciI | TCATGA | 3 cut(s) | 364, 3379, 3409 |
| CfoI | GCGC | 1 cut(s) | 148 |
| Cfr10I | RCCGGY | 2 cut(s) | 2543, 2784 |
| Cfr13I | GGNCC | 7 cut(s) | 118, 292, 1495, 1666, 2243, 3053, 3415 |
| CseI | GACGC | 2 cut(s) | 1193, 2395 |
| CsiI | ACCWGGT | 1 cut(s) | 66 |
| Csp6I | GTAC | 6 cut(s) | 227, 307, 3162, 3242, 3465, 3525 |
| CviQI | GTAC | 6 cut(s) | 227, 307, 3162, 3242, 3465, 3525 |
| DraI | TTTAAA | 2 cut(s) | 2323, 2508 |
| EaeI | YGGCCR | 3 cut(s) | 159, 736, 1696 |
| Eam1104I | CTCTTC | 3 cut(s) | 447, 2478, 3137 |
| EarI | CTCTTC | 3 cut(s) | 447, 2478, 3137 |
| EciI | GGCGGA | 1 cut(s) | 3437 |
| Eco130I | CCWWGG | 7 cut(s) | 162, 894, 1137, 1468, 1522, 3048, 3573 |
| Eco147I | AGGCCT | 1 cut(s) | 1415 |
| Eco32I | GATATC | 1 cut(s) | 3846 |
| Eco47I | GGWCC | 4 cut(s) | 118, 292, 1495, 3053 |
| Eco57I | CTGAAG | 7 cut(s) | 516, 783, 2004, 2318, 2895, 3161, 3801 |
| Eco88I | CYCGRG | 1 cut(s) | 184 |
| EcoO109I | RGGNCCY | 3 cut(s) | 292, 3053, 3415 |
| EcoRI | GAATTC | 3 cut(s) | 1302, 1318, 3532 |
| EcoRV | GATATC | 1 cut(s) | 3846 |
| EcoT14I | CCWWGG | 7 cut(s) | 162, 894, 1137, 1468, 1522, 3048, 3573 |
| EcoT22I | ATGCAT | 3 cut(s) | 259, 263, 805 |
| ErhI | CCWWGG | 7 cut(s) | 162, 894, 1137, 1468, 1522, 3048, 3573 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 525, 557, 878, 910, 2316, 2348 |
| FaqI | GGGAC | 4 cut(s) | 1415, 3066, 3291, 3895 |
| FauNDI | CATATG | 2 cut(s) | 250, 3604 |
| FbaI | TGATCA | 1 cut(s) | 631 |
| FokI | GGATG | 7 cut(s) | 701, 1154, 1310, 1541, 1798, 2537, 3031 |
| FspI | TGCGCA | 1 cut(s) | 147 |
| GlaI | GCGC | 1 cut(s) | 147 |
| GsaI | CCCAGC | 1 cut(s) | 2053 |
| GsuI | CTGGAG | 5 cut(s) | 575, 966, 1328, 3147, 3273 |
| HapII | CCGG | 5 cut(s) | 190, 287, 2544, 2785, 2826 |
| HgaI | GACGC | 2 cut(s) | 1193, 2395 |
| HhaI | GCGC | 1 cut(s) | 148 |
| Hin6I | GCGC | 1 cut(s) | 146 |
| HinP1I | GCGC | 1 cut(s) | 146 |
| HincII | GTYRAC | 1 cut(s) | 1465 |
| HindII | GTYRAC | 1 cut(s) | 1465 |
| HindIII | AAGCTT | 2 cut(s) | 2317, 2502 |
| HpaII | CCGG | 5 cut(s) | 190, 287, 2544, 2785, 2826 |
| HphI | GGTGA | 9 cut(s) | 1652, 1800, 2170, 2556, 2604, 3333, 3679, 3749, 3761 |
| Hpy166II | GTNNAC | 9 cut(s) | 218, 307, 309, 1465, 1808, 2995, 3164, 3740, 3752 |
| Hpy8I | GTNNAC | 9 cut(s) | 218, 307, 309, 1465, 1808, 2995, 3164, 3740, 3752 |
| HpyCH4IV | ACGT | 6 cut(s) | 301, 627, 1711, 1912, 2166, 3742 |
| HpySE526I | ACGT | 6 cut(s) | 301, 627, 1711, 1912, 2166, 3742 |
| HspAI | GCGC | 1 cut(s) | 146 |
| Kpn2I | TCCGGA | 1 cut(s) | 286 |
| Ksp22I | TGATCA | 1 cut(s) | 631 |
| LmnI | GCTCC | 1 cut(s) | 898 |
| MabI | ACCWGGT | 1 cut(s) | 66 |
| MaeII | ACGT | 6 cut(s) | 301, 627, 1711, 1912, 2166, 3742 |
| MbiI | CCGCTC | 1 cut(s) | 1251 |
| MflI | RGATCY | 2 cut(s) | 1090, 3517 |
| MhlI | GDGCHC | 7 cut(s) | 284, 487, 903, 2299, 3074, 3136, 3334 |
| MlsI | TGGCCA | 3 cut(s) | 161, 738, 1698 |
| MluNI | TGGCCA | 3 cut(s) | 161, 738, 1698 |
| MlyI | GAGTC | 7 cut(s) | 17, 202, 1092, 1256, 1961, 2284, 3623 |
| MmeI | TCCRAC | 5 cut(s) | 61, 96, 1103, 1200, 3250 |
| Mox20I | TGGCCA | 3 cut(s) | 161, 738, 1698 |
| Mph1103I | ATGCAT | 3 cut(s) | 259, 263, 805 |
| MroI | TCCGGA | 1 cut(s) | 286 |
| MroXI | GAANNNNTTC | 3 cut(s) | 930, 1477, 3375 |
| MscI | TGGCCA | 3 cut(s) | 161, 738, 1698 |
| MslI | CAYNNNNRTG | 2 cut(s) | 2118, 3171 |
| Msp20I | TGGCCA | 3 cut(s) | 161, 738, 1698 |
| MspA1I | CMGCKG | 2 cut(s) | 512, 761 |
| MspI | CCGG | 5 cut(s) | 190, 287, 2544, 2785, 2826 |
| Mva1269I | GAATGC | 3 cut(s) | 668, 805, 1132 |
| NcoI | CCATGG | 2 cut(s) | 1137, 3573 |
| NdeI | CATATG | 2 cut(s) | 250, 3604 |
| NheI | GCTAGC | 1 cut(s) | 3017 |
| NlaIV | GGNNCC | 8 cut(s) | 120, 484, 508, 1092, 2244, 2681, 3054, 3333 |
| NmeAIII | GCCGAG | 1 cut(s) | 2744 |
| NmuCI | GTSAC | 6 cut(s) | 62, 1595, 1676, 1920, 2162, 2562 |
| NsbI | TGCGCA | 1 cut(s) | 147 |
| NsiI | ATGCAT | 3 cut(s) | 259, 263, 805 |
| NspI | RCATGY | 7 cut(s) | 261, 1027, 1624, 1847, 2407, 3248, 3287 |
| PaeI | GCATGC | 4 cut(s) | 261, 1027, 1624, 1847 |
| PaeR7I | CTCGAG | 1 cut(s) | 184 |
| PagI | TCATGA | 3 cut(s) | 364, 3379, 3409 |
| PceI | AGGCCT | 1 cut(s) | 1415 |
| PctI | GAATGC | 3 cut(s) | 668, 805, 1132 |
| PdmI | GAANNNNTTC | 3 cut(s) | 930, 1477, 3375 |
| PfoI | TCCNGGA | 1 cut(s) | 294 |
| PleI | GAGTC | 7 cut(s) | 17, 201, 1092, 1256, 1961, 2283, 3622 |
| PpsI | GAGTC | 7 cut(s) | 17, 201, 1092, 1256, 1961, 2283, 3622 |
| PpuMI | RGGWCCY | 2 cut(s) | 292, 3053 |
| PshBI | ATTAAT | 1 cut(s) | 647 |
| PsiI | TTATAA | 1 cut(s) | 2472 |
| Psp5II | RGGWCCY | 2 cut(s) | 292, 3053 |
| PspFI | CCCAGC | 1 cut(s) | 2049 |
| PspN4I | GGNNCC | 8 cut(s) | 120, 484, 508, 1092, 2244, 2681, 3054, 3333 |
| PspPI | GGNCC | 7 cut(s) | 118, 292, 1495, 1666, 2243, 3053, 3415 |
| PspPPI | RGGWCCY | 2 cut(s) | 292, 3053 |
| PstI | CTGCAG | 3 cut(s) | 579, 880, 1296 |
| PstNI | CAGNNNCTG | 1 cut(s) | 3650 |
| PsuI | RGATCY | 2 cut(s) | 1090, 3517 |
| PvuII | CAGCTG | 1 cut(s) | 761 |
| RsaI | GTAC | 6 cut(s) | 228, 308, 3163, 3243, 3466, 3526 |
| RsaNI | GTAC | 6 cut(s) | 227, 307, 3162, 3242, 3465, 3525 |
| RseI | CAYNNNNRTG | 2 cut(s) | 2118, 3171 |
| Sau96I | GGNCC | 7 cut(s) | 118, 292, 1495, 1666, 2243, 3053, 3415 |
| ScaI | AGTACT | 2 cut(s) | 228, 3466 |
| SchI | GAGTC | 7 cut(s) | 17, 202, 1092, 1256, 1961, 2284, 3623 |
| SduI | GDGCHC | 7 cut(s) | 284, 487, 903, 2299, 3074, 3136, 3334 |
| SexAI | ACCWGGT | 1 cut(s) | 66 |
| SfcI | CTRYAG | 8 cut(s) | 329, 384, 575, 609, 876, 1292, 1362, 1741 |
| Sfr274I | CTCGAG | 1 cut(s) | 184 |
| SinI | GGWCC | 4 cut(s) | 118, 292, 1495, 3053 |
| SlaI | CTCGAG | 1 cut(s) | 184 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 2118, 3171 |
| SmlI | CTYRAG | 2 cut(s) | 184, 3218 |
| SmoI | CTYRAG | 2 cut(s) | 184, 3218 |
| SpeI | ACTAGT | 1 cut(s) | 3929 |
| SphI | GCATGC | 4 cut(s) | 261, 1027, 1624, 1847 |
| SseBI | AGGCCT | 1 cut(s) | 1415 |
| SsiI | CCGC | 6 cut(s) | 209, 510, 614, 1249, 3422, 3499 |
| SspI | AATATT | 1 cut(s) | 929 |
| StuI | AGGCCT | 1 cut(s) | 1415 |
| StyI | CCWWGG | 7 cut(s) | 162, 894, 1137, 1468, 1522, 3048, 3573 |
| TaiI | ACGT | 6 cut(s) | 304, 630, 1714, 1915, 2169, 3745 |
| TaqI | TCGA | 8 cut(s) | 21, 175, 185, 233, 1190, 1552, 1839, 3363 |
| TatI | WGTACW | 6 cut(s) | 226, 306, 3161, 3241, 3464, 3524 |
| TauI | GCSGC | 4 cut(s) | 211, 617, 1251, 3502 |
| TscAI | CASTG | 8 cut(s) | 207, 441, 746, 1827, 2935, 3117, 3516, 3811 |
| TseFI | GTSAC | 6 cut(s) | 62, 1595, 1676, 1920, 2162, 2562 |
| Tsp45I | GTSAC | 6 cut(s) | 62, 1595, 1676, 1920, 2162, 2562 |
| TspGWI | ACGGA | 2 cut(s) | 107, 1896 |
| TspRI | CASTG | 8 cut(s) | 207, 441, 746, 1827, 2935, 3117, 3516, 3811 |
| VpaK11BI | GGWCC | 4 cut(s) | 118, 292, 1495, 3053 |
| VspI | ATTAAT | 1 cut(s) | 647 |
| XapI | RAATTY | 7 cut(s) | 1302, 1318, 1370, 1423, 2636, 3259, 3532 |
| XceI | RCATGY | 7 cut(s) | 261, 1027, 1624, 1847, 2407, 3248, 3287 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2851 |
| XhoI | CTCGAG | 1 cut(s) | 184 |
| XmnI | GAANNNNTTC | 3 cut(s) | 930, 1477, 3375 |
| ZrmI | AGTACT | 2 cut(s) | 228, 3466 |
| Zsp2I | ATGCAT | 3 cut(s) | 259, 263, 805 |