FvH4_4g12000

UEV domain

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Reverse (-)
15712799 .. 15714013
1215 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g12000.t1

Sequence Viewer

Length: 1215 bp
ATGTCATCCCCGCAATCGGAGCAACAGCTGGCCACCTTCCTGAGCGGCGTCCTCTCGCAGCGCGGCCCCTCCGCCCTCCCCTACGCCGAGGACATCAAATGGCTGATCCGGCAGCACCTCGTCGCCCTCATCTCCTCCTACCCTTCCCTAGAGCCCAAAACGGCGACGTTCACCCACAACGACGGGCGCGCCGTCAACCTCCTCCAGATCGACGGCACCGTCCCGATGCCGTTTCAGGGCGTGACCTACAACATCCCCGTCGTCATCTGGCTCATGGACGTCTACCCTCGCCACGCTCCTTGCGTCTACGTCAACCCCACGCGCGATATGATCATCAAGCGCCCCCATCCCTTCGTGGACCCCTCCGGCCTCGTCGTCAACGTCCCCTATCTCAAGGAATGGGTCTTCCCCAGCTCCAATCTCGTCGACCTCGCTCGCCATCTCAGCCAGCACTTCGCTCAAGATCCGCCGCTCTATTCCTCCCCCCGCCCCCGGAATCCCACTCCAAACCCAAACCCTAACCCTACCTCTCATCTCTCTCCGACTTTGTCTAATTCCGGTTATTCCTCCGGGAGCTATGCTCGCCCGGTGATTCCGCCGACGAGGCAGTACCCGCCGTCGCCGTACGGCAGCGGGTCGTTCTCTCGGGTGCAGACGGACGACCCGACGGAGGTGTACAGGCGGAATGCGATTAACAAGCTTGTGGAGATGGTGCACGGGGACATGGCCGGGCTGAGGAAGGCCAGGGAGGCTGAGATGGACGGGCTTTTCAATGCGCAGGTGGCGCTGCGGCAGCGGTCGGAGCAGTTAGGGAGGGGGATGAAGGAGATGCTGGACGAGAAGGAGGGTTTGGAGCAGCAATTGCAGATGGTTTTGATGAATTCTGATGTGCTTGAGGGGTGGCTGAGGGAGAACGAAGGGAAGAGTAAGGATGGTGGTGTGGATGTGGACGATGCTTTCGAGTGTGTGGATGCCCTTTCAAAGCAGATGTTGGAGTGTACGGCGTCGGATTTGGCTATAGAGGATGTTGTGTATTCGCTGGATAAGGCGGTGCAGGATGGGGCCGTACCGTTTGATCAGTATTTGAGGACTGTCAGGTTGCTGTCGAGGGAGCAGTTCTTTCATCGGGCTACGGCGGCCAAGGTCAGGGCCGTGCAGATGCAATCACAAGTTGCTAACATGGCCGCTAGGCTCACACATTATGTTGCATCGTAG

Protein Analysis

405

Amino Acids

45.09

Weight (kDa)

6.08

Isoelectric Point (pI)

54.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UEV PF05743 37 - 158 7.1e-40 UEV domain
Vps23_core PF09454 318 - 381 1.1e-24 Vps23 core domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 769
AasI GACNNNNNNGTC 1 cut(s) 218
AatII GACGTC 1 cut(s) 282
Acc16I TGCGCA 1 cut(s) 777
Acc36I ACCTGC 1 cut(s) 769
AccB1I GGYRCC 1 cut(s) 215
AccBSI CCGCTC 2 cut(s) 45, 472
AccI GTMKAC 3 cut(s) 282, 306, 426
AccII CGCG 4 cut(s) 63, 189, 322, 324
AclWI GGATC 2 cut(s) 100, 458
AcoI YGGCCR 4 cut(s) 30, 726, 1137, 1182
AcsI RAATTY 1 cut(s) 880
AcyI GRCGYC 3 cut(s) 48, 279, 1004
AfaI GTAC 5 cut(s) 611, 626, 677, 1000, 1068
AfiI CCNNNNNNNGG 6 cut(s) 16, 236, 492, 670, 735, 1146
AgsI TTSAA 2 cut(s) 772, 981
AjnI CCWGG 1 cut(s) 743
AjuI GAANNNNNNNTTGG 2 cut(s) 833, 865
AluBI AGCT 4 cut(s) 28, 414, 576, 700
AluI AGCT 4 cut(s) 28, 414, 576, 700
Alw21I GWGCWC 1 cut(s) 717
Alw44I GTGCAC 1 cut(s) 713
AlwI GGATC 2 cut(s) 100, 458
Ama87I CYCGRG 1 cut(s) 645
AoxI GGCC 9 cut(s) 30, 64, 367, 726, 741, 1062, 1137, 1149, 1182
ApaLI GTGCAC 1 cut(s) 713
ApeKI GCWGC 6 cut(s) 58, 112, 630, 787, 793, 856
ApoI RAATTY 1 cut(s) 880
ArsI GACNNNNNNTTYG 2 cut(s) 941, 973
AscI GGCGCGCC 1 cut(s) 187
AspLEI GCGC 7 cut(s) 63, 189, 191, 324, 342, 778, 787
AspS9I GGNCC 4 cut(s) 65, 358, 1062, 1149
AsuC2I CCSGG 4 cut(s) 493, 571, 587, 730
AsuHPI GGTGA 2 cut(s) 163, 601
AvaI CYCGRG 1 cut(s) 645
AvaII GGWCC 1 cut(s) 358
BaeGI GKGCMC 1 cut(s) 717
BalI TGGCCA 1 cut(s) 32
BanI GGYRCC 1 cut(s) 215
BanII GRGCYC 1 cut(s) 156
BbsI GAAGAC 1 cut(s) 397
Bbv12I GWGCWC 1 cut(s) 717
BbvCI CCTCAGC 2 cut(s) 734, 905
BbvI GCAGC 6 cut(s) 70, 124, 642, 774, 805, 868
BccI CCATC 7 cut(s) 354, 447, 703, 751, 862, 926, 1052
BciT130I CCWGG 1 cut(s) 745
BclI TGATCA 2 cut(s) 330, 1075
BcnI CCSGG 4 cut(s) 493, 571, 587, 730
BfaI CTAG 2 cut(s) 149, 1188
BfmI CTRYAG 1 cut(s) 1017
BfoI RGCGCY 2 cut(s) 343, 788
BfuAI ACCTGC 1 cut(s) 769
BglI GCCNNNNNGGC 2 cut(s) 604, 749
Bme1390I CCNGG 5 cut(s) 493, 571, 587, 730, 745
Bme18I GGWCC 1 cut(s) 358
BmeT110I CYCGRG 1 cut(s) 645
BmgT120I GGNCC 4 cut(s) 65, 358, 1062, 1149
BmiI GGNNCC 4 cut(s) 67, 217, 360, 1063
BmrFI CCNGG 5 cut(s) 493, 571, 587, 730, 745
BmsI GCATC 5 cut(s) 216, 819, 943, 961, 1149
BpiI GAAGAC 1 cut(s) 397
BplI GAGNNNNNCTC 2 cut(s) 565, 597
BpmI CTGGAG 1 cut(s) 188
Bpu10I CCTNAGC 3 cut(s) 41, 734, 905
BpuEI CTTGAG 3 cut(s) 377, 444, 914
BpuMI CCSGG 4 cut(s) 493, 571, 587, 730
BsaHI GRCGYC 3 cut(s) 48, 279, 1004
BsaJI CCNNGG 4 cut(s) 87, 491, 744, 1140
BsaWI WCCGGW 1 cut(s) 557
Bsc4I CCNNNNNNNGG 6 cut(s) 16, 236, 492, 670, 735, 1146
BseBI CCWGG 1 cut(s) 745
BseDI CCNNGG 4 cut(s) 87, 491, 744, 1140
BseGI GGATG 9 cut(s) 5, 252, 346, 825, 937, 949, 976, 1030, 1063
BseLI CCNNNNNNNGG 6 cut(s) 16, 236, 492, 670, 735, 1146
BseMII CTCAG 5 cut(s) 32, 457, 725, 744, 896
BsePI GCGCGC 1 cut(s) 187
BseRI GAGGAG 2 cut(s) 124, 191
BseSI GKGCMC 1 cut(s) 717
BseXI GCAGC 6 cut(s) 70, 124, 642, 774, 805, 868
BseYI CCCAGC 1 cut(s) 410
BsgI GTGCAG 3 cut(s) 671, 1073, 1175
Bsh1236I CGCG 4 cut(s) 63, 189, 322, 324
Bsh1285I CGRYCG 1 cut(s) 800
BshFI GGCC 9 cut(s) 32, 66, 369, 728, 743, 1064, 1139, 1151, 1184
BshNI GGYRCC 1 cut(s) 215
BsiEI CGRYCG 1 cut(s) 800
BsiHKAI GWGCWC 1 cut(s) 717
BsiHKCI CYCGRG 1 cut(s) 645
BsiSI CCGG 7 cut(s) 109, 366, 493, 558, 570, 587, 729
BsiWI CGTACG 1 cut(s) 624
BslFI GGGAC 3 cut(s) 206, 368, 734
BslI CCNNNNNNNGG 6 cut(s) 16, 236, 492, 670, 735, 1146
BsmFI GGGAC 3 cut(s) 206, 368, 734
BsmI GAATGC 1 cut(s) 691
BsnI GGCC 9 cut(s) 32, 66, 369, 728, 743, 1064, 1139, 1151, 1184
BsoBI CYCGRG 1 cut(s) 645
Bsp1286I GDGCHC 2 cut(s) 156, 717
Bsp1407I TGTACA 1 cut(s) 675
Bsp143I GATC 5 cut(s) 105, 207, 330, 463, 1075
BspANI GGCC 9 cut(s) 32, 66, 369, 728, 743, 1064, 1139, 1151, 1184
BspCNI CTCAG 5 cut(s) 33, 456, 726, 745, 897
BspFNI CGCG 4 cut(s) 63, 189, 322, 324
BspLI GGNNCC 4 cut(s) 67, 217, 360, 1063
BspMI ACCTGC 1 cut(s) 769
BspPI GGATC 2 cut(s) 100, 458
BspT107I GGYRCC 1 cut(s) 215
BsrBI CCGCTC 2 cut(s) 45, 472
BsrGI TGTACA 1 cut(s) 675
BssECI CCNNGG 4 cut(s) 87, 491, 744, 1140
BssHII GCGCGC 1 cut(s) 187
BssMI GATC 5 cut(s) 105, 207, 330, 463, 1075
BssNI GRCGYC 3 cut(s) 48, 279, 1004
BssT1I CCWWGG 1 cut(s) 1140
Bst2UI CCWGG 1 cut(s) 745
Bst4CI ACNGT 3 cut(s) 220, 1071, 1093
Bst6I CTCTTC 1 cut(s) 917
BstACI GRCGYC 3 cut(s) 48, 279, 1004
BstAPI GCANNNNNTGC 1 cut(s) 862
BstAUI TGTACA 1 cut(s) 675
BstC8I GCNNGC 5 cut(s) 30, 189, 436, 449, 583
BstDEI CTNAG 5 cut(s) 41, 443, 734, 753, 905
BstF5I GGATG 9 cut(s) 5, 252, 346, 825, 937, 949, 976, 1030, 1063
BstFNI CGCG 4 cut(s) 63, 189, 322, 324
BstH2I RGCGCY 2 cut(s) 343, 788
BstHHI GCGC 7 cut(s) 63, 189, 191, 324, 342, 778, 787
BstKTI GATC 5 cut(s) 108, 210, 333, 466, 1078
BstMBI GATC 5 cut(s) 105, 207, 330, 463, 1075
BstMCI CGRYCG 1 cut(s) 800
BstNI CCWGG 1 cut(s) 745
BstSCI CCNGG 5 cut(s) 491, 569, 585, 728, 743
BstSFI CTRYAG 1 cut(s) 1017
BstSLI GKGCMC 1 cut(s) 717
BstUI CGCG 4 cut(s) 63, 189, 322, 324
BstV1I GCAGC 6 cut(s) 70, 124, 642, 774, 805, 868
BstV2I GAAGAC 1 cut(s) 397
BstX2I RGATCY 1 cut(s) 463
BstYI RGATCY 1 cut(s) 463
BsuRI GGCC 9 cut(s) 32, 66, 369, 728, 743, 1064, 1139, 1151, 1184
BtsCI GGATG 9 cut(s) 5, 252, 346, 825, 937, 949, 976, 1030, 1063
BveI ACCTGC 1 cut(s) 769
Cac8I GCNNGC 5 cut(s) 30, 189, 436, 449, 583
CfoI GCGC 7 cut(s) 63, 189, 191, 324, 342, 778, 787
Cfr13I GGNCC 4 cut(s) 65, 358, 1062, 1149
CseI GACGC 3 cut(s) 37, 292, 993
Csp6I GTAC 5 cut(s) 610, 625, 676, 999, 1067
CspCI CAANNNNNGTGG 2 cut(s) 281, 316
CviAII CATG 3 cut(s) 274, 724, 1180
CviQI GTAC 5 cut(s) 610, 625, 676, 999, 1067
DdeI CTNAG 5 cut(s) 41, 443, 734, 753, 905
DpnI GATC 5 cut(s) 107, 209, 332, 465, 1077
DpnII GATC 5 cut(s) 105, 207, 330, 463, 1075
DrdI GACNNNNNNGTC 1 cut(s) 218
DseDI GACNNNNNNGTC 1 cut(s) 218
EaeI YGGCCR 4 cut(s) 30, 726, 1137, 1182
Eam1104I CTCTTC 1 cut(s) 917
EarI CTCTTC 1 cut(s) 917
EciI GGCGGA 4 cut(s) 61, 456, 585, 697
Eco130I CCWWGG 1 cut(s) 1140
Eco24I GRGCYC 1 cut(s) 156
Eco47I GGWCC 1 cut(s) 358
Eco88I CYCGRG 1 cut(s) 645
EcoRI GAATTC 1 cut(s) 880
EcoRII CCWGG 1 cut(s) 743
EcoT14I CCWWGG 1 cut(s) 1140
EcoT38I GRGCYC 1 cut(s) 156
ErhI CCWWGG 1 cut(s) 1140
FaeI CATG 3 cut(s) 277, 727, 1183
FaiI YATR 7 cut(s) 275, 329, 579, 725, 1019, 1181, 1203
FaqI GGGAC 3 cut(s) 206, 368, 734
FatI CATG 3 cut(s) 273, 723, 1179
FauI CCCGC 4 cut(s) 18, 494, 621, 626
FbaI TGATCA 2 cut(s) 330, 1075
FblI GTMKAC 3 cut(s) 282, 306, 426
FokI GGATG 8 cut(s) 239, 333, 832, 944, 956, 983, 1037, 1070
FriOI GRGCYC 1 cut(s) 156
FspBI CTAG 2 cut(s) 149, 1188
FspI TGCGCA 1 cut(s) 777
GlaI GCGC 7 cut(s) 62, 188, 190, 323, 341, 777, 786
GsaI CCCAGC 1 cut(s) 414
GsuI CTGGAG 1 cut(s) 188
HaeII RGCGCY 2 cut(s) 343, 788
HaeIII GGCC 9 cut(s) 32, 66, 369, 728, 743, 1064, 1139, 1151, 1184
HapII CCGG 7 cut(s) 109, 366, 493, 558, 570, 587, 729
HgaI GACGC 3 cut(s) 37, 292, 993
HhaI GCGC 7 cut(s) 63, 189, 191, 324, 342, 778, 787
Hin1I GRCGYC 3 cut(s) 48, 279, 1004
Hin1II CATG 3 cut(s) 277, 727, 1183
Hin6I GCGC 7 cut(s) 61, 187, 189, 322, 340, 776, 785
HinP1I GCGC 7 cut(s) 61, 187, 189, 322, 340, 776, 785
HincII GTYRAC 4 cut(s) 196, 313, 379, 427
HindII GTYRAC 4 cut(s) 196, 313, 379, 427
HindIII AAGCTT 1 cut(s) 698
HinfI GANTC 2 cut(s) 496, 592
HpaII CCGG 7 cut(s) 109, 366, 493, 558, 570, 587, 729
HphI GGTGA 2 cut(s) 163, 601
Hpy188I TCNGA 5 cut(s) 19, 543, 802, 886, 1009
Hpy188III TCNNGA 4 cut(s) 40, 205, 223, 461
HpyAV CCTTC 7 cut(s) 46, 153, 361, 733, 817, 835, 911
HpyCH4III ACNGT 3 cut(s) 220, 1071, 1093
HpyCH4IV ACGT 4 cut(s) 167, 279, 309, 381
HpyCH4V TGCA 7 cut(s) 652, 715, 865, 1054, 1156, 1162, 1208
HpyF3I CTNAG 5 cut(s) 41, 443, 734, 753, 905
HpySE526I ACGT 4 cut(s) 167, 279, 309, 381
Hsp92I GRCGYC 3 cut(s) 48, 279, 1004
Hsp92II CATG 3 cut(s) 277, 727, 1183
HspAI GCGC 7 cut(s) 61, 187, 189, 322, 340, 776, 785
Ksp22I TGATCA 2 cut(s) 330, 1075
Kzo9I GATC 5 cut(s) 105, 207, 330, 463, 1075
LmnI GCTCC 7 cut(s) 19, 301, 419, 573, 802, 853, 1111
Lsp1109I GCAGC 6 cut(s) 70, 124, 642, 774, 805, 868
LweI GCATC 5 cut(s) 216, 819, 943, 961, 1149
MaeI CTAG 2 cut(s) 149, 1188
MaeII ACGT 4 cut(s) 167, 279, 309, 381
MaeIII GTNAC 1 cut(s) 241
MalI GATC 5 cut(s) 107, 209, 332, 465, 1077
MbiI CCGCTC 2 cut(s) 45, 472
MboI GATC 5 cut(s) 105, 207, 330, 463, 1075
MboII GAAGA 2 cut(s) 397, 934
MfeI CAATTG 1 cut(s) 860
MflI RGATCY 1 cut(s) 463
MhlI GDGCHC 2 cut(s) 156, 717
MlsI TGGCCA 1 cut(s) 32
MluCI AATT 3 cut(s) 553, 860, 880
MluNI TGGCCA 1 cut(s) 32
MmeI TCCRAC 4 cut(s) 566, 780, 972, 987
Mox20I TGGCCA 1 cut(s) 32
MscI TGGCCA 1 cut(s) 32
MseI TTAA 1 cut(s) 693
Msp20I TGGCCA 1 cut(s) 32
MspA1I CMGCKG 3 cut(s) 28, 633, 796
MspI CCGG 7 cut(s) 109, 366, 493, 558, 570, 587, 729
MspR9I CCNGG 5 cut(s) 493, 571, 587, 730, 745
MunI CAATTG 1 cut(s) 860
Mva1269I GAATGC 1 cut(s) 691
MvaI CCWGG 1 cut(s) 745
MvnI CGCG 4 cut(s) 63, 189, 322, 324
NciI CCSGG 4 cut(s) 493, 571, 587, 730
NdeII GATC 5 cut(s) 105, 207, 330, 463, 1075
NlaIII CATG 3 cut(s) 277, 727, 1183
NlaIV GGNNCC 4 cut(s) 67, 217, 360, 1063
NmeAIII GCCGAG 1 cut(s) 112
NmuCI GTSAC 1 cut(s) 241
NsbI TGCGCA 1 cut(s) 777
PalAI GGCGCGCC 1 cut(s) 187
PaqCI CACCTGC 1 cut(s) 769
PauI GCGCGC 1 cut(s) 187
PcsI WCGNNNNNNNCGW 6 cut(s) 189, 216, 300, 378, 662, 957
PctI GAATGC 1 cut(s) 691
PfeI GAWTC 2 cut(s) 496, 592
Pfl23II CGTACG 1 cut(s) 624
PflFI GACNNNGTC 1 cut(s) 547
PfoI TCCNGGA 1 cut(s) 569
Psp6I CCWGG 1 cut(s) 743
PspFI CCCAGC 1 cut(s) 410
PspGI CCWGG 1 cut(s) 743
PspLI CGTACG 1 cut(s) 624
PspN4I GGNNCC 4 cut(s) 67, 217, 360, 1063
PspPI GGNCC 4 cut(s) 65, 358, 1062, 1149
PsuI RGATCY 1 cut(s) 463
PsyI GACNNNGTC 1 cut(s) 547
PteI GCGCGC 1 cut(s) 187
PvuII CAGCTG 1 cut(s) 28
RsaI GTAC 5 cut(s) 611, 626, 677, 1000, 1068
RsaNI GTAC 5 cut(s) 610, 625, 676, 999, 1067
SalI GTCGAC 1 cut(s) 425
SaqAI TTAA 1 cut(s) 693
Sau3AI GATC 5 cut(s) 105, 207, 330, 463, 1075
Sau96I GGNCC 4 cut(s) 65, 358, 1062, 1149
ScrFI CCNGG 5 cut(s) 493, 571, 587, 730, 745
SduI GDGCHC 2 cut(s) 156, 717
SfaNI GCATC 5 cut(s) 216, 819, 943, 961, 1149
SfcI CTRYAG 1 cut(s) 1017
SgsI GGCGCGCC 1 cut(s) 187
SinI GGWCC 1 cut(s) 358
SmlI CTYRAG 3 cut(s) 392, 459, 893
SmoI CTYRAG 3 cut(s) 392, 459, 893
Sse9I AATT 3 cut(s) 553, 860, 880
SspMI CTAG 2 cut(s) 149, 1188
StyD4I CCNGG 5 cut(s) 491, 569, 585, 728, 743
StyI CCWWGG 1 cut(s) 1140
TaaI ACNGT 3 cut(s) 220, 1071, 1093
TaiI ACGT 4 cut(s) 170, 282, 312, 384
TaqI TCGA 4 cut(s) 210, 426, 960, 1106
TasI AATT 3 cut(s) 553, 860, 880
TatI WGTACW 1 cut(s) 675
TauI GCSGC 6 cut(s) 48, 66, 472, 793, 1139, 1187
TfiI GAWTC 2 cut(s) 496, 592
Tru1I TTAA 1 cut(s) 693
Tru9I TTAA 1 cut(s) 693
TseFI GTSAC 1 cut(s) 241
TseI GCWGC 6 cut(s) 58, 112, 630, 787, 793, 856
Tsp45I GTSAC 1 cut(s) 241
TspDTI ATGAA 3 cut(s) 836, 893, 1112
TspGWI ACGGA 2 cut(s) 671, 683
Tth111I GACNNNGTC 1 cut(s) 547
VneI GTGCAC 1 cut(s) 713
VpaK11BI GGWCC 1 cut(s) 358
XapI RAATTY 1 cut(s) 880
XmiI GTMKAC 3 cut(s) 282, 306, 426
XspI CTAG 2 cut(s) 149, 1188
ZraI GACGTC 1 cut(s) 280
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.