Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0010848

Physical Location & Seq

Genomic Coordinates Reverse (-)

3129541 .. 3131092

Gene Structure 1552 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g03690.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1497 bp

ATGGCCATATACAGACATGGCCCTGGGCAAGATTTTACTTTGATCTTGTTGAAAACGAGTGAGACACAGAAGTCACCGCACCACGCTGTCGCCTGTCCCAAACACCCCAATTGCCATCCAAATTCTCAATCGATCAAAAACTCGCTCCGATTAAAATCCTCCCTCGCCCCTCTCTTTTCTCGGAATCTCAAATCTCAACCTTCCGAACCCGACCCGATCCAAATTGCTGCCATGGTTCCACCGGCCGGTCCGAGCCCACCGAACCCCCAACTGATCCAGCAGTTCCTGAGCTCCGTCCTCTCCCAACGCGGCCCCTCCGCCCTCCCTTACTCCGAGGACACCAAGTGGCTCATCCGCACCCACCTCGTCTCTCTCACCTCCGCCTACCCTTCCCTCGAGCCCAAAACCGCGACGTTCACCCACAACGACGGTCGCTCCGTCAACCTCCTCCAGGCCAACGGCACCATCCCCATGTCGTTCCAGGGCGTCACCTACAACATCCCCGTCATCATCTGGCTCATGGAGTCCTACCCTCGCCACCCGCCCTGCGTCTACGTCAACCCCACGCGCGACATGGTCATCAAGCGCCCTCACGCCCACGTCAACCCTTCTGGTTCGGTCTCCATTCCCTACTTGCAGAACTGGGTCTACCCTAGCTCCAACCTCGTCGAGCTCGTCAAGAATCTCAGCGCCGTTTTCGGTCAGGACCCGCCGCTCTTCTCCCAGCGCAGGCCCAATCCCAATCCCAATCCAAACCCTAACCCTAATCCTAACCTTGGTCATTCCTCGTCGGCTGTGTCGAATTCAGGATATTCGAGCTACCCGGGATATTCGGGCTCATCGGGATCGGCTAATCCTGCCCGTCCTGCAATTCCGCCGAGGACGTACCCGCCGTCACCCTATGGAAGTAGTGGATCATTTTCTCGCGTTCAGACTGATGATCCGAATGAGGTTTTCAAGAGGAATGCGATCAATAAGCTTGTGGAGATGGTGCACGGCGACATGGCAGGGTTGAGGAAGACGAGGGAGGCGGAAATTGAAGGCTTGTTCAATGCACAGGCGGTGCTGCGGCAGCGATCGGAGCAGCTCAACAAAGGGTTGAAAGAGATGGTGGATGAGAAGGAGGGTTTGGAGCAGCAGTTGCAGATGGTGCTGATGAATTTGGATGTTTTGGAGGCCTGGTTGAGAGAGAATGAGGGGAAGACCAGGGGGAGGCTGGATGGTGATGTGGACGATGCTTTCGAATGCATTGACCCGCTTTCGAAGCAGATGTTGGATTGTACAGCCTCTGATTTGGCGATTGAAGATGTTGTGTATTCTTTGGATAAGGCATTGCAGGATGGGTCAATAGCCTTTGAGGAGTACTTGAAGAATGTGAGGTCATTGTCCCGCAAGCAGTTCTATCATCGTGCTACAGCTGCTAAAGTCAGGGCAGTACAAATGCAATCGCAGGTTGCGAATATGGCTTCCCGACTTTCACATTATGTTTCATCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000813 GO:0000902 GO:0000904 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005770 GO:0008150 GO:0009653 GO:0009888 GO:0009987 GO:0010008 GO:0010026 GO:0010090 GO:0010091 GO:0012505 GO:0016020 GO:0016043 GO:0030154 GO:0031090 GO:0031410 GO:0031982 GO:0032182 GO:0032502 GO:0032989 GO:0032991 GO:0036452 GO:0043130 GO:0043226 GO:0043227 GO:0043229 GO:0044422 GO:0044424 GO:0044425 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0048468 GO:0048856 GO:0048869 GO:0051301 GO:0071840 GO:0090558 GO:0090626 GO:0097708 GO:0098588 GO:0098796 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

UEV Vps23_core

Protein Analysis

499

Amino Acids

55.04

Weight (kDa)

8.77

Isoelectric Point (pI)

54.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UEV	PF05743	119 - 239	2.2e-43	UEV domain
Vps23_core	PF09454	412 - 475	8.3e-25	Vps23 core domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010848)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13860
fragaria_vesca	FvH4_4g12000
malus_domestica	MD00G1152100.v1.1 MD02G1270800.v1.1
prunus_persica	Prupe.2G048600_v2.0.a1
pyrus_communis	pycom02g23170 pycom07g03690
rosa_chinensis	RchiOBHm_Chr4g0409601
rosa_laevigata	RLG00000008550
rosa_multiflora	Rmu_co8343695.1_g000001 Rmu_sc0008771.1_g000003 Rmu_sc0013495.1_g000005 Rmu_sc0028358.1_g000001
rosa_roxburghii	Rroxscaffold_5G00354080
rosa_rugosa	Rorug04G0095000
rosa_samantha	Rh4AG157000 Rh4BG156100 Rh4CG166500 Rh4DG150200
rosa_wichuraiana	Rw4G012940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	70
Acc36I	ACCTGC	1 cut(s)	1441
AccB1I	GGYRCC	1 cut(s)	461
AccBSI	CCGCTC	1 cut(s)	715
AccI	GTMKAC	2 cut(s)	552, 648
AccII	CGCG	5 cut(s)	309, 410, 568, 570, 927
AclWI	GGATC	5 cut(s)	211, 268, 853, 922, 935
AcoI	YGGCCR	2 cut(s)	3, 243
AcsI	RAATTY	3 cut(s)	121, 802, 1159
AcyI	GRCGYC	1 cut(s)	486
AdeI	CACNNNGTG	1 cut(s)	345
AfaI	GTAC	4 cut(s)	887, 1282, 1364, 1437
AfiI	CCNNNNNNNGG	5 cut(s)	245, 451, 729, 776, 1212
AgsI	TTSAA	7 cut(s)	52, 958, 1040, 1051, 1102, 1304, 1369
AjiI	CACGTC	1 cut(s)	601
AjnI	CCWGG	5 cut(s)	22, 450, 480, 1178, 1205
AjuI	GAANNNNNNNTTGG	4 cut(s)	1112, 1144, 1256, 1288
AluBI	AGCT	7 cut(s)	291, 657, 673, 819, 979, 1087, 1418
AluI	AGCT	7 cut(s)	291, 657, 673, 819, 979, 1087, 1418
Alw21I	GWGCWC	3 cut(s)	293, 675, 996
Alw26I	GTCTC	3 cut(s)	56, 373, 625
Alw44I	GTGCAC	1 cut(s)	992
AlwI	GGATC	5 cut(s)	211, 268, 853, 922, 935
AlwNI	CAGNNNCTG	2 cut(s)	286, 1289
Ama87I	CYCGRG	2 cut(s)	395, 823
AoxI	GGCC	7 cut(s)	3, 19, 243, 310, 453, 731, 1176
ApaLI	GTGCAC	1 cut(s)	992
ApeKI	GCWGC	6 cut(s)	227, 1066, 1072, 1084, 1135, 1418
ApoI	RAATTY	3 cut(s)	121, 802, 1159
ArsI	GACNNNNNNTTYG	2 cut(s)	1223, 1255
AspLEI	GCGC	4 cut(s)	570, 588, 692, 729
AspS9I	GGNCC	5 cut(s)	20, 248, 311, 706, 732
AsuC2I	CCSGG	2 cut(s)	824, 825
AsuHPI	GGTGA	6 cut(s)	66, 367, 409, 481, 888, 1235
AsuII	TTCGAA	2 cut(s)	1242, 1262
AvaI	CYCGRG	2 cut(s)	395, 823
AvaII	GGWCC	2 cut(s)	248, 706
BaeGI	GKGCMC	1 cut(s)	996
BalI	TGGCCA	1 cut(s)	5
BanI	GGYRCC	1 cut(s)	461
BanII	GRGCYC	5 cut(s)	257, 293, 402, 675, 839
BbsI	GAAGAC	2 cut(s)	1025, 1208
Bbv12I	GWGCWC	3 cut(s)	293, 675, 996
BbvI	GCAGC	6 cut(s)	214, 1053, 1084, 1096, 1147, 1405
BccI	CCATC	7 cut(s)	123, 473, 982, 1102, 1141, 1214, 1334
BceAI	ACGGC	4 cut(s)	475, 677, 877, 1012
BcgI	CGANNNNNNTGC	2 cut(s)	346, 380
BciT130I	CCWGG	5 cut(s)	24, 452, 482, 1180, 1207
BcnI	CCSGG	2 cut(s)	824, 825
BcoDI	GTCTC	3 cut(s)	56, 373, 625
BfaI	CTAG	1 cut(s)	654
BfmI	CTRYAG	1 cut(s)	1413
BfoI	RGCGCY	2 cut(s)	589, 693
BfuAI	ACCTGC	1 cut(s)	1441
BisI	GCNGC	9 cut(s)	228, 310, 713, 1067, 1070, 1073, 1085, 1136, 1419
BlsI	GCNGC	9 cut(s)	229, 311, 714, 1068, 1071, 1074, 1086, 1137, 1420
BmcAI	AGTACT	1 cut(s)	1364
Bme1390I	CCNGG	7 cut(s)	24, 452, 482, 824, 825, 1180, 1207
Bme18I	GGWCC	2 cut(s)	248, 706
BmeT110I	CYCGRG	2 cut(s)	395, 823
BmgBI	CACGTC	1 cut(s)	601
BmgT120I	GGNCC	5 cut(s)	20, 248, 311, 706, 732
BmiI	GGNNCC	4 cut(s)	237, 313, 463, 708
BmrFI	CCNGG	7 cut(s)	24, 452, 482, 824, 825, 1180, 1207
BmrI	ACTGGG	1 cut(s)	652
BmsI	GCATC	1 cut(s)	1225
BmuI	ACTGGG	1 cut(s)	652
BpiI	GAAGAC	2 cut(s)	1025, 1208
BpmI	CTGGAG	1 cut(s)	434
Bpu10I	CCTNAGC	1 cut(s)	287
Bpu14I	TTCGAA	2 cut(s)	1242, 1262
BpuMI	CCSGG	2 cut(s)	824, 825
Bsa29I	ATCGAT	1 cut(s)	131
BsaBI	GATNNNNATC	1 cut(s)	154
BsaHI	GRCGYC	1 cut(s)	486
BsaI	GGTCTC	1 cut(s)	625
BsaJI	CCNNGG	9 cut(s)	22, 23, 231, 333, 481, 775, 823, 878, 1206
BsaXI	ACNNNNNCTCC	8 cut(s)	419, 449, 641, 671, 1124, 1154, 1166, 1196
Bsc4I	CCNNNNNNNGG	5 cut(s)	245, 451, 729, 776, 1212
Bse118I	RCCGGY	2 cut(s)	241, 245
Bse1I	ACTGG	1 cut(s)	647
Bse3DI	GCAATG	1 cut(s)	1331
Bse8I	GATNNNNATC	1 cut(s)	154
BseBI	CCWGG	5 cut(s)	24, 452, 482, 1180, 1207
BseCI	ATCGAT	1 cut(s)	131
BseDI	CCNNGG	9 cut(s)	22, 23, 231, 333, 481, 775, 823, 878, 1206
BseGI	GGATG	8 cut(s)	115, 351, 465, 498, 1120, 1171, 1225, 1345
BseJI	GATNNNNATC	1 cut(s)	154
BseLI	CCNNNNNNNGG	5 cut(s)	245, 451, 729, 776, 1212
BseMI	GCAATG	1 cut(s)	1331
BseMII	CTCAG	2 cut(s)	278, 700
BseNI	ACTGG	1 cut(s)	647
BseRI	GAGGAG	2 cut(s)	437, 1373
BseSI	GKGCMC	1 cut(s)	996
BseX3I	CGGCCG	1 cut(s)	243
BseXI	GCAGC	6 cut(s)	214, 1053, 1084, 1096, 1147, 1405
BseYI	CCCAGC	1 cut(s)	723
Bsh1236I	CGCG	5 cut(s)	309, 410, 568, 570, 927
Bsh1285I	CGRYCG	3 cut(s)	246, 433, 1079
BshFI	GGCC	7 cut(s)	5, 21, 245, 312, 455, 733, 1178
BshNI	GGYRCC	1 cut(s)	461
BshVI	ATCGAT	1 cut(s)	131
BsiEI	CGRYCG	3 cut(s)	246, 433, 1079
BsiHKAI	GWGCWC	3 cut(s)	293, 675, 996
BsiHKCI	CYCGRG	2 cut(s)	395, 823
BsiSI	CCGG	3 cut(s)	242, 246, 824
BslFI	GGGAC	2 cut(s)	81, 1372
BslI	CCNNNNNNNGG	5 cut(s)	245, 451, 729, 776, 1212
BsmAI	GTCTC	3 cut(s)	56, 373, 625
BsmBI	CGTCTC	1 cut(s)	373
BsmFI	GGGAC	2 cut(s)	81, 1372
BsmI	GAATGC	2 cut(s)	970, 1250
BsnI	GGCC	7 cut(s)	5, 21, 245, 312, 455, 733, 1178
Bso31I	GGTCTC	1 cut(s)	625
BsoBI	CYCGRG	2 cut(s)	395, 823
Bsp119I	TTCGAA	2 cut(s)	1242, 1262
Bsp1286I	GDGCHC	6 cut(s)	257, 293, 402, 675, 839, 996
Bsp1407I	TGTACA	1 cut(s)	1280
Bsp143I	GATC	9 cut(s)	42, 132, 216, 273, 845, 914, 940, 969, 1076
Bsp19I	CCATGG	1 cut(s)	231
BspANI	GGCC	7 cut(s)	5, 21, 245, 312, 455, 733, 1178
BspCNI	CTCAG	2 cut(s)	279, 699
BspDI	ATCGAT	1 cut(s)	131
BspFNI	CGCG	5 cut(s)	309, 410, 568, 570, 927
BspLI	GGNNCC	4 cut(s)	237, 313, 463, 708
BspMI	ACCTGC	1 cut(s)	1441
BspPI	GGATC	5 cut(s)	211, 268, 853, 922, 935
BspQI	GCTCTTC	1 cut(s)	722
BspT104I	TTCGAA	2 cut(s)	1242, 1262
BspT107I	GGYRCC	1 cut(s)	461
BspTNI	GGTCTC	1 cut(s)	625
BsrBI	CCGCTC	1 cut(s)	715
BsrDI	GCAATG	1 cut(s)	1331
BsrFI	RCCGGY	2 cut(s)	241, 245
BsrGI	TGTACA	1 cut(s)	1280
BsrI	ACTGG	1 cut(s)	647
BssAI	RCCGGY	2 cut(s)	241, 245
BssECI	CCNNGG	9 cut(s)	22, 23, 231, 333, 481, 775, 823, 878, 1206
BssMI	GATC	9 cut(s)	42, 132, 216, 273, 845, 914, 940, 969, 1076
BssNI	GRCGYC	1 cut(s)	486
BssT1I	CCWWGG	2 cut(s)	231, 775
Bst2UI	CCWGG	5 cut(s)	24, 452, 482, 1180, 1207
Bst4CI	ACNGT	1 cut(s)	431
Bst6I	CTCTTC	1 cut(s)	722
BstACI	GRCGYC	1 cut(s)	486
BstAPI	GCANNNNNTGC	2 cut(s)	1141, 1150
BstAUI	TGTACA	1 cut(s)	1280
BstBI	TTCGAA	2 cut(s)	1242, 1262
BstC8I	GCNNGC	2 cut(s)	731, 1394
BstDEI	CTNAG	3 cut(s)	287, 686, 1494
BstDSI	CCRYGG	1 cut(s)	231
BstENI	CCTNNNNNAGG	1 cut(s)	449
BstF5I	GGATG	8 cut(s)	115, 351, 465, 498, 1120, 1171, 1225, 1345
BstFNI	CGCG	5 cut(s)	309, 410, 568, 570, 927
BstH2I	RGCGCY	2 cut(s)	589, 693
BstHHI	GCGC	4 cut(s)	570, 588, 692, 729
BstKTI	GATC	9 cut(s)	45, 135, 219, 276, 848, 917, 943, 972, 1079
BstMAI	GTCTC	3 cut(s)	56, 373, 625
BstMBI	GATC	9 cut(s)	42, 132, 216, 273, 845, 914, 940, 969, 1076
BstMCI	CGRYCG	3 cut(s)	246, 433, 1079
BstMWI	GCNNNNNNNGC	9 cut(s)	857, 866, 1072, 1081, 1141, 1150, 1264, 1418, 1463
BstNI	CCWGG	5 cut(s)	24, 452, 482, 1180, 1207
BstSCI	CCNGG	7 cut(s)	22, 450, 480, 822, 823, 1178, 1205
BstSFI	CTRYAG	1 cut(s)	1413
BstSLI	GKGCMC	1 cut(s)	996
BstUI	CGCG	5 cut(s)	309, 410, 568, 570, 927
BstV1I	GCAGC	6 cut(s)	214, 1053, 1084, 1096, 1147, 1405
BstV2I	GAAGAC	2 cut(s)	1025, 1208
BstZI	CGGCCG	1 cut(s)	243
Bsu15I	ATCGAT	1 cut(s)	131
BsuRI	GGCC	7 cut(s)	5, 21, 245, 312, 455, 733, 1178
BsuTUI	ATCGAT	1 cut(s)	131
BtgI	CCRYGG	1 cut(s)	231
BtrI	CACGTC	1 cut(s)	601
BtsCI	GGATG	8 cut(s)	115, 351, 465, 498, 1120, 1171, 1225, 1345
BveI	ACCTGC	1 cut(s)	1441
Cac8I	GCNNGC	2 cut(s)	731, 1394
CaiI	CAGNNNCTG	2 cut(s)	286, 1289
CfoI	GCGC	4 cut(s)	570, 588, 692, 729
Cfr10I	RCCGGY	2 cut(s)	241, 245
Cfr13I	GGNCC	5 cut(s)	20, 248, 311, 706, 732
Cfr9I	CCCGGG	1 cut(s)	823
ClaI	ATCGAT	1 cut(s)	131
CpoI	CGGWCCG	1 cut(s)	248
CseI	GACGC	2 cut(s)	475, 538
Csp6I	GTAC	4 cut(s)	886, 1281, 1363, 1436
CspI	CGGWCCG	1 cut(s)	248
CviAII	CATG	6 cut(s)	17, 232, 472, 520, 574, 1003
CviQI	GTAC	4 cut(s)	886, 1281, 1363, 1436
DdeI	CTNAG	3 cut(s)	287, 686, 1494
DpnI	GATC	9 cut(s)	44, 134, 218, 275, 847, 916, 942, 971, 1078
DpnII	GATC	9 cut(s)	42, 132, 216, 273, 845, 914, 940, 969, 1076
DraIII	CACNNNGTG	1 cut(s)	345
DrdI	GACNNNNNNGTC	1 cut(s)	70
DseDI	GACNNNNNNGTC	1 cut(s)	70
EaeI	YGGCCR	2 cut(s)	3, 243
EagI	CGGCCG	1 cut(s)	243
Eam1104I	CTCTTC	1 cut(s)	722
EarI	CTCTTC	1 cut(s)	722
EciI	GGCGGA	4 cut(s)	307, 370, 864, 1046
Ecl136II	GAGCTC	2 cut(s)	291, 673
EclXI	CGGCCG	1 cut(s)	243
Eco130I	CCWWGG	2 cut(s)	231, 775
Eco147I	AGGCCT	1 cut(s)	1178
Eco24I	GRGCYC	5 cut(s)	257, 293, 402, 675, 839
Eco31I	GGTCTC	1 cut(s)	625
Eco47I	GGWCC	2 cut(s)	248, 706
Eco52I	CGGCCG	1 cut(s)	243
Eco53kI	GAGCTC	2 cut(s)	291, 673
Eco88I	CYCGRG	2 cut(s)	395, 823
EcoICRI	GAGCTC	2 cut(s)	291, 673
EcoNI	CCTNNNNNAGG	1 cut(s)	449
EcoO109I	RGGNCCY	1 cut(s)	706
EcoRI	GAATTC	1 cut(s)	802
EcoRII	CCWGG	5 cut(s)	22, 450, 480, 1178, 1205
EcoT14I	CCWWGG	2 cut(s)	231, 775
EcoT22I	ATGCAT	1 cut(s)	1250
EcoT38I	GRGCYC	5 cut(s)	257, 293, 402, 675, 839
ErhI	CCWWGG	2 cut(s)	231, 775
Esp3I	CGTCTC	1 cut(s)	373
FaeI	CATG	6 cut(s)	20, 235, 475, 523, 577, 1006
FaqI	GGGAC	2 cut(s)	81, 1372
FatI	CATG	6 cut(s)	16, 231, 471, 519, 573, 1002
FauI	CCCGC	5 cut(s)	549, 717, 897, 1263, 1397
FblI	GTMKAC	2 cut(s)	552, 648
Fnu4HI	GCNGC	9 cut(s)	228, 310, 713, 1067, 1070, 1073, 1085, 1136, 1419
FokI	GGATG	8 cut(s)	102, 338, 452, 485, 1127, 1178, 1232, 1352
FriOI	GRGCYC	5 cut(s)	257, 293, 402, 675, 839
Fsp4HI	GCNGC	9 cut(s)	228, 310, 713, 1067, 1070, 1073, 1085, 1136, 1419
FspBI	CTAG	1 cut(s)	654
GlaI	GCGC	4 cut(s)	569, 587, 691, 728
GluI	GCNGC	9 cut(s)	228, 310, 713, 1067, 1070, 1073, 1085, 1136, 1419
GsaI	CCCAGC	1 cut(s)	727
GsuI	CTGGAG	1 cut(s)	434
HaeII	RGCGCY	2 cut(s)	589, 693
HaeIII	GGCC	7 cut(s)	5, 21, 245, 312, 455, 733, 1178
HapII	CCGG	3 cut(s)	242, 246, 824
HgaI	GACGC	2 cut(s)	475, 538
HhaI	GCGC	4 cut(s)	570, 588, 692, 729
Hin1I	GRCGYC	1 cut(s)	486
Hin1II	CATG	6 cut(s)	20, 235, 475, 523, 577, 1006
Hin6I	GCGC	4 cut(s)	568, 586, 690, 727
HinP1I	GCGC	4 cut(s)	568, 586, 690, 727
HincII	GTYRAC	3 cut(s)	442, 559, 604
HindII	GTYRAC	3 cut(s)	442, 559, 604
HindIII	AAGCTT	1 cut(s)	977
HinfI	GANTC	3 cut(s)	184, 524, 682
HpaII	CCGG	3 cut(s)	242, 246, 824
HphI	GGTGA	6 cut(s)	66, 367, 409, 481, 888, 1235
Hpy166II	GTNNAC	8 cut(s)	417, 442, 553, 559, 604, 649, 994, 1231
Hpy188I	TCNGA	9 cut(s)	149, 183, 205, 252, 334, 933, 945, 1081, 1291
Hpy188III	TCNNGA	7 cut(s)	286, 679, 704, 807, 843, 958, 1470
Hpy8I	GTNNAC	8 cut(s)	417, 442, 553, 559, 604, 649, 994, 1231
Hpy99I	CGWCG	4 cut(s)	415, 431, 671, 793
HpyAV	CCTTC	5 cut(s)	210, 399, 618, 1034, 1114
HpyCH4III	ACNGT	1 cut(s)	431
HpyCH4IV	ACGT	4 cut(s)	413, 555, 600, 884
HpyCH4V	TGCA	8 cut(s)	637, 869, 994, 1055, 1144, 1248, 1336, 1444
HpyF10VI	GCNNNNNNNGC	9 cut(s)	857, 866, 1072, 1081, 1141, 1150, 1264, 1418, 1463
HpyF3I	CTNAG	3 cut(s)	287, 686, 1494
HpySE526I	ACGT	4 cut(s)	413, 555, 600, 884
Hsp92I	GRCGYC	1 cut(s)	486
Hsp92II	CATG	6 cut(s)	20, 235, 475, 523, 577, 1006
HspAI	GCGC	4 cut(s)	568, 586, 690, 727
Kzo9I	GATC	9 cut(s)	42, 132, 216, 273, 845, 914, 940, 969, 1076
LguI	GCTCTTC	1 cut(s)	722
LmnI	GCTCC	6 cut(s)	150, 296, 440, 662, 1081, 1132
Lsp1109I	GCAGC	6 cut(s)	214, 1053, 1084, 1096, 1147, 1405
LweI	GCATC	1 cut(s)	1225
MaeI	CTAG	1 cut(s)	654
MaeII	ACGT	4 cut(s)	413, 555, 600, 884
MaeIII	GTNAC	3 cut(s)	72, 487, 894
MalI	GATC	9 cut(s)	44, 134, 218, 275, 847, 916, 942, 971, 1078
MbiI	CCGCTC	1 cut(s)	715
MboI	GATC	9 cut(s)	42, 132, 216, 273, 845, 914, 940, 969, 1076
MboII	GAAGA	5 cut(s)	709, 1030, 1213, 1316, 1381
MfeI	CAATTG	1 cut(s)	109
MhlI	GDGCHC	6 cut(s)	257, 293, 402, 675, 839, 996
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	7 cut(s)	109, 121, 222, 802, 870, 1035, 1159
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	1 cut(s)	533
MmeI	TCCRAC	2 cut(s)	684, 1254
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	1 cut(s)	1250
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	1 cut(s)	152
MslI	CAYNNNNRTG	1 cut(s)	470
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	1 cut(s)	1418
MspI	CCGG	3 cut(s)	242, 246, 824
MspR9I	CCNGG	7 cut(s)	24, 452, 482, 824, 825, 1180, 1207
MunI	CAATTG	1 cut(s)	109
Mva1269I	GAATGC	2 cut(s)	970, 1250
MvaI	CCWGG	5 cut(s)	24, 452, 482, 1180, 1207
MvnI	CGCG	5 cut(s)	309, 410, 568, 570, 927
MwoI	GCNNNNNNNGC	9 cut(s)	857, 866, 1072, 1081, 1141, 1150, 1264, 1418, 1463
NciI	CCSGG	2 cut(s)	824, 825
NcoI	CCATGG	1 cut(s)	231
NdeII	GATC	9 cut(s)	42, 132, 216, 273, 845, 914, 940, 969, 1076
NlaIII	CATG	6 cut(s)	20, 235, 475, 523, 577, 1006
NlaIV	GGNNCC	4 cut(s)	237, 313, 463, 708
NmeAIII	GCCGAG	1 cut(s)	903
NmuCI	GTSAC	3 cut(s)	72, 487, 894
NsiI	ATGCAT	1 cut(s)	1250
NspV	TTCGAA	2 cut(s)	1242, 1262
PaeR7I	CTCGAG	1 cut(s)	395
PasI	CCCWGGG	1 cut(s)	23
PceI	AGGCCT	1 cut(s)	1178
PciSI	GCTCTTC	1 cut(s)	722
PcsI	WCGNNNNNNNCGW	6 cut(s)	435, 672, 797, 890, 1239, 1454
PctI	GAATGC	2 cut(s)	970, 1250
PfeI	GAWTC	2 cut(s)	184, 682
PflFI	GACNNNGTC	1 cut(s)	575
PkrI	GCNGC	9 cut(s)	229, 311, 714, 1068, 1071, 1074, 1086, 1137, 1420
Ple19I	CGATCG	1 cut(s)	1079
PleI	GAGTC	1 cut(s)	532
PpsI	GAGTC	1 cut(s)	532
PpuMI	RGGWCCY	1 cut(s)	706
Psp124BI	GAGCTC	2 cut(s)	293, 675
Psp5II	RGGWCCY	1 cut(s)	706
Psp6I	CCWGG	5 cut(s)	22, 450, 480, 1178, 1205
PspFI	CCCAGC	1 cut(s)	723
PspGI	CCWGG	5 cut(s)	22, 450, 480, 1178, 1205
PspN4I	GGNNCC	4 cut(s)	237, 313, 463, 708
PspPI	GGNCC	5 cut(s)	20, 248, 311, 706, 732
PspPPI	RGGWCCY	1 cut(s)	706
PspXI	VCTCGAGB	1 cut(s)	395
PsrI	GAACNNNNNNTAC	2 cut(s)	632, 664
PstNI	CAGNNNCTG	2 cut(s)	286, 1289
PsyI	GACNNNGTC	1 cut(s)	575
PvuI	CGATCG	1 cut(s)	1079
PvuII	CAGCTG	1 cut(s)	1418
RsaI	GTAC	4 cut(s)	887, 1282, 1364, 1437
RsaNI	GTAC	4 cut(s)	886, 1281, 1363, 1436
RseI	CAYNNNNRTG	1 cut(s)	470
Rsr2I	CGGWCCG	1 cut(s)	248
RsrII	CGGWCCG	1 cut(s)	248
SacI	GAGCTC	2 cut(s)	293, 675
SapI	GCTCTTC	1 cut(s)	722
SaqAI	TTAA	1 cut(s)	152
SatI	GCNGC	9 cut(s)	228, 310, 713, 1067, 1070, 1073, 1085, 1136, 1419
Sau3AI	GATC	9 cut(s)	42, 132, 216, 273, 845, 914, 940, 969, 1076
Sau96I	GGNCC	5 cut(s)	20, 248, 311, 706, 732
ScaI	AGTACT	1 cut(s)	1364
SchI	GAGTC	1 cut(s)	533
ScrFI	CCNGG	7 cut(s)	24, 452, 482, 824, 825, 1180, 1207
SduI	GDGCHC	6 cut(s)	257, 293, 402, 675, 839, 996
SfaNI	GCATC	1 cut(s)	1225
SfcI	CTRYAG	1 cut(s)	1413
Sfr274I	CTCGAG	1 cut(s)	395
SfuI	TTCGAA	2 cut(s)	1242, 1262
SinI	GGWCC	2 cut(s)	248, 706
SlaI	CTCGAG	1 cut(s)	395
SmaI	CCCGGG	1 cut(s)	825
SmiMI	CAYNNNNRTG	1 cut(s)	470
SmlI	CTYRAG	1 cut(s)	395
SmoI	CTYRAG	1 cut(s)	395
Sse9I	AATT	7 cut(s)	109, 121, 222, 802, 870, 1035, 1159
SseBI	AGGCCT	1 cut(s)	1178
SspMI	CTAG	1 cut(s)	654
SstI	GAGCTC	2 cut(s)	293, 675
StuI	AGGCCT	1 cut(s)	1178
StyD4I	CCNGG	7 cut(s)	22, 450, 480, 822, 823, 1178, 1205
StyI	CCWWGG	2 cut(s)	231, 775
TaaI	ACNGT	1 cut(s)	431
TaiI	ACGT	4 cut(s)	416, 558, 603, 887
TaqI	TCGA	7 cut(s)	131, 396, 669, 800, 815, 1242, 1262
TaqII	GACCGA	2 cut(s)	607, 689
TasI	AATT	7 cut(s)	109, 121, 222, 802, 870, 1035, 1159
TatI	WGTACW	3 cut(s)	1280, 1362, 1435
TauI	GCSGC	3 cut(s)	312, 715, 1072
TfiI	GAWTC	2 cut(s)	184, 682
Tru1I	TTAA	1 cut(s)	152
Tru9I	TTAA	1 cut(s)	152
TseFI	GTSAC	3 cut(s)	72, 487, 894
TseI	GCWGC	6 cut(s)	227, 1066, 1072, 1084, 1135, 1418
Tsp45I	GTSAC	3 cut(s)	72, 487, 894
TspDTI	ATGAA	2 cut(s)	1172, 1479
TspGWI	ACGGA	2 cut(s)	283, 427
TspMI	CCCGGG	1 cut(s)	823
Tth111I	GACNNNGTC	1 cut(s)	575
VneI	GTGCAC	1 cut(s)	992
VpaK11BI	GGWCC	2 cut(s)	248, 706
XagI	CCTNNNNNAGG	1 cut(s)	449
XapI	RAATTY	3 cut(s)	121, 802, 1159
XcmI	CCANNNNNNNNNTGG	2 cut(s)	571, 1213
XhoI	CTCGAG	1 cut(s)	395
XmaI	CCCGGG	1 cut(s)	823
XmiI	GTMKAC	2 cut(s)	552, 648
XspI	CTAG	1 cut(s)	654
ZrmI	AGTACT	1 cut(s)	1364
Zsp2I	ATGCAT	1 cut(s)	1250

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.