Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0010848

Physical Location & Seq

Genomic Coordinates Reverse (-)

36692007 .. 36697498

Gene Structure 5492 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG166500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1224 bp

ATGGCATCCCCGCAATCGGAGCAACAGACGGCGACGTTCCTGAACAGCGTGCTCTCGCAGCGCGGCCCCTCCGCCCTCCCTTACGCCGAAGAACTCAAATGGCTCATCCGGCAGCACCTCGTCGCTCTCGTCTCCTCCTACCCTTCCCTCGAGCCCAAAACGGCGACGTTCACCCACAACAACGGCCGCACCGTCAACCTCCTTCAGGTCGACGGCACCGTCCCGATGACCTACCAGGGCGTCACCTACAACATCCCCGTCGTCTTCTGGCTCATCGACTCCTACCCTCGCTTCGCTCCCTGCGTCTACGTCAACCCCACCCGCGACATGGTCATCAAGCGCCCTCATCCCTGTGTCGACCCCTCCGGCATAGTCTCCATCCCTTATCTCCAGGACTGGGTCTTCCCCAGCTCCAATCTCCTCGACCTCACTCGCCAGCTCAGCGACTACTTTGGCCGTGACCCGCCGCTCTACTCCTCACAGCGCCGGCCCAATCCGCCTCCGAATCCAAACCCTAACCCTAACCCTAGCCATCATCTGTCGCCGACTCTGTCGAATTCGAGTTATTCTTCTTCCGGAAGCTATGCTCGGCCGGTGATTCCGCCGACCAGGACGTACCCGCCGTCGCCGTACGGCAGCGGCGCGTCGTTTTCTCGGGTTCAGACCGATGATCCGACGGAGGTGTACAAGCGGAATGCCATCAATAAGCTTGTGGAGATGGTGCACGGGGACATGGACGGGTTGAGGAAGATGAGGGAGGCCGAAATGGACGGCCTTTTCAATGCGCAGGTGGCGCTGCGGCAGCGATCGGAGCAGCTCGGGAAAGGCTTGAAGGAGATGCTGGACGAGAAGGAGGGTCTGGAGCAGCAATTGCAGATGGTTCTGATGAATTCTGATGTTCTGGAGGGATGGCTGAGAGAGAACGAGGGCAAGACCAAGGATGGCGGTGTGGATGTCGACGATGCTTTCCAGTGTGTGGATGCGCTTTCGAAGCAGATGTTGGATTGTACAGCCTCTGATTTGGCTATAGAAGATGTTGTGTATTCGTTGGATAAGGCTGTGCAGGATGGGGCTATTCCATTTGATCAGTACTTGAGGACTGTCAGGTTGCTGTCAAGGGAGCAATTCTTTCACCGGGCTACAGCGGCCAAGGTCAGGGCCGTGCAGATGCAATCACAAGTTGCTAACATGGCCGCTAGGCTCTCACATTATGTTGCATCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000813 GO:0000902 GO:0000904 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005770 GO:0008150 GO:0009653 GO:0009888 GO:0009987 GO:0010008 GO:0010026 GO:0010090 GO:0010091 GO:0012505 GO:0016020 GO:0016043 GO:0030154 GO:0031090 GO:0031410 GO:0031982 GO:0032182 GO:0032502 GO:0032989 GO:0032991 GO:0036452 GO:0043130 GO:0043226 GO:0043227 GO:0043229 GO:0044422 GO:0044424 GO:0044425 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0048468 GO:0048856 GO:0048869 GO:0051301 GO:0071840 GO:0090558 GO:0090626 GO:0097708 GO:0098588 GO:0098796 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

UEV Vps23_core

Protein Analysis

407

Amino Acids

45.51

Weight (kDa)

5.94

Isoelectric Point (pI)

49.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UEV	PF05743	37 - 157	3.3e-40	UEV domain
Vps23_core	PF09454	322 - 384	1.3e-24	Vps23 core domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010848)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13860
fragaria_vesca	FvH4_4g12000
malus_domestica	MD00G1152100.v1.1 MD02G1270800.v1.1
prunus_persica	Prupe.2G048600_v2.0.a1
pyrus_communis	pycom02g23170 pycom07g03690
rosa_chinensis	RchiOBHm_Chr4g0409601
rosa_laevigata	RLG00000008550
rosa_multiflora	Rmu_co8343695.1_g000001 Rmu_sc0008771.1_g000003 Rmu_sc0013495.1_g000005 Rmu_sc0028358.1_g000001
rosa_roxburghii	Rroxscaffold_5G00354080
rosa_rugosa	Rorug04G0095000
rosa_samantha	Rh4AG157000 Rh4BG156100 Rh4CG166500 Rh4DG150200
rosa_wichuraiana	Rw4G012940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	778
AasI	GACNNNNNNGTC	1 cut(s)	218
Acc16I	TGCGCA	1 cut(s)	786
Acc36I	ACCTGC	1 cut(s)	778
AccB1I	GGYRCC	1 cut(s)	215
AccB7I	CCANNNNNTGG	1 cut(s)	976
AccBSI	CCGCTC	1 cut(s)	469
AccI	GTMKAC	4 cut(s)	210, 306, 357, 957
AccII	CGCG	3 cut(s)	63, 324, 644
AccIII	TCCGGA	1 cut(s)	575
AclWI	GGATC	1 cut(s)	665
AcoI	YGGCCR	5 cut(s)	184, 454, 590, 1146, 1191
AcsI	RAATTY	2 cut(s)	556, 889
AcuI	CTGAAG	1 cut(s)	188
AcyI	GRCGYC	1 cut(s)	240
AfaI	GTAC	5 cut(s)	617, 632, 686, 1009, 1091
AfiI	CCNNNNNNNGG	6 cut(s)	16, 205, 328, 397, 976, 1155
AgsI	TTSAA	2 cut(s)	781, 832
AjnI	CCWGG	3 cut(s)	234, 390, 608
AjuI	GAANNNNNNNTTGG	2 cut(s)	983, 1015
AluBI	AGCT	5 cut(s)	411, 439, 582, 709, 817
AluI	AGCT	5 cut(s)	411, 439, 582, 709, 817
Alw21I	GWGCWC	2 cut(s)	54, 726
Alw26I	GTCTC	2 cut(s)	136, 379
Alw44I	GTGCAC	1 cut(s)	722
AlwI	GGATC	1 cut(s)	665
AlwNI	CAGNNNCTG	1 cut(s)	1016
Ama87I	CYCGRG	3 cut(s)	149, 654, 818
Aor13HI	TCCGGA	1 cut(s)	575
ApaLI	GTGCAC	1 cut(s)	722
ApeKI	GCWGC	7 cut(s)	58, 112, 636, 796, 802, 814, 865
ApoI	RAATTY	2 cut(s)	556, 889
AspLEI	GCGC	7 cut(s)	63, 342, 486, 644, 787, 796, 985
AspS9I	GGNCC	3 cut(s)	65, 489, 1158
AsuC2I	CCSGG	1 cut(s)	1136
AsuHPI	GGTGA	4 cut(s)	163, 235, 607, 1124
AsuII	TTCGAA	1 cut(s)	989
AvaI	CYCGRG	3 cut(s)	149, 654, 818
BaeGI	GKGCMC	1 cut(s)	726
BanI	GGYRCC	1 cut(s)	215
BanII	GRGCYC	1 cut(s)	156
BbsI	GAAGAC	2 cut(s)	256, 394
Bbv12I	GWGCWC	2 cut(s)	54, 726
BbvI	GCAGC	7 cut(s)	70, 124, 648, 783, 814, 826, 877
BccI	CCATC	8 cut(s)	386, 540, 707, 712, 871, 903, 935, 1061
BciT130I	CCWGG	3 cut(s)	236, 392, 610
BclI	TGATCA	1 cut(s)	1084
BcnI	CCSGG	1 cut(s)	1136
BcoDI	GTCTC	2 cut(s)	136, 379
BfaI	CTAG	2 cut(s)	528, 1197
BfmI	CTRYAG	2 cut(s)	1026, 1140
BfoI	RGCGCY	3 cut(s)	343, 487, 797
BfuAI	ACCTGC	1 cut(s)	778
BlpI	GCTNAGC	1 cut(s)	440
BmcAI	AGTACT	1 cut(s)	1091
Bme1390I	CCNGG	4 cut(s)	236, 392, 610, 1136
BmeT110I	CYCGRG	3 cut(s)	149, 654, 818
BmgT120I	GGNCC	3 cut(s)	65, 489, 1158
BmiI	GGNNCC	2 cut(s)	67, 217
BmrFI	CCNGG	4 cut(s)	236, 392, 610, 1136
BmrI	ACTGGG	1 cut(s)	406
BmsI	GCATC	5 cut(s)	14, 828, 952, 970, 1158
BmuI	ACTGGG	1 cut(s)	406
BpiI	GAAGAC	2 cut(s)	256, 394
BpmI	CTGGAG	3 cut(s)	374, 881, 923
Bpu1102I	GCTNAGC	1 cut(s)	440
Bpu14I	TTCGAA	1 cut(s)	989
BpuEI	CTTGAG	1 cut(s)	1114
BpuMI	CCSGG	1 cut(s)	1136
BsaHI	GRCGYC	1 cut(s)	240
BsaJI	CCNNGG	3 cut(s)	235, 936, 1149
BsaWI	WCCGGW	1 cut(s)	575
Bsc4I	CCNNNNNNNGG	6 cut(s)	16, 205, 328, 397, 976, 1155
Bse118I	RCCGGY	2 cut(s)	486, 592
Bse1I	ACTGG	2 cut(s)	401, 970
BseAI	TCCGGA	1 cut(s)	575
BseBI	CCWGG	3 cut(s)	236, 392, 610
BseDI	CCNNGG	3 cut(s)	235, 936, 1149
BseLI	CCNNNNNNNGG	6 cut(s)	16, 205, 328, 397, 976, 1155
BseMII	CTCAG	2 cut(s)	454, 905
BseNI	ACTGG	2 cut(s)	401, 970
BseRI	GAGGAG	3 cut(s)	124, 410, 466
BseSI	GKGCMC	1 cut(s)	726
BseX3I	CGGCCG	2 cut(s)	184, 590
BseXI	GCAGC	7 cut(s)	70, 124, 648, 783, 814, 826, 877
BseYI	CCCAGC	1 cut(s)	407
BsgI	GTGCAG	2 cut(s)	1082, 1184
Bsh1236I	CGCG	3 cut(s)	63, 324, 644
Bsh1285I	CGRYCG	3 cut(s)	187, 593, 809
BshNI	GGYRCC	1 cut(s)	215
BsiEI	CGRYCG	3 cut(s)	187, 593, 809
BsiHKAI	GWGCWC	2 cut(s)	54, 726
BsiHKCI	CYCGRG	3 cut(s)	149, 654, 818
BsiSI	CCGG	6 cut(s)	109, 366, 487, 576, 593, 1135
BsiWI	CGTACG	1 cut(s)	630
BslFI	GGGAC	2 cut(s)	206, 743
BslI	CCNNNNNNNGG	6 cut(s)	16, 205, 328, 397, 976, 1155
BsmAI	GTCTC	2 cut(s)	136, 379
BsmBI	CGTCTC	1 cut(s)	136
BsmFI	GGGAC	2 cut(s)	206, 743
BsmI	GAATGC	1 cut(s)	700
BsoBI	CYCGRG	3 cut(s)	149, 654, 818
Bsp119I	TTCGAA	1 cut(s)	989
Bsp1286I	GDGCHC	3 cut(s)	54, 156, 726
Bsp13I	TCCGGA	1 cut(s)	575
Bsp1407I	TGTACA	2 cut(s)	684, 1007
Bsp143I	GATC	3 cut(s)	670, 806, 1084
Bsp1720I	GCTNAGC	1 cut(s)	440
BspCNI	CTCAG	2 cut(s)	453, 906
BspEI	TCCGGA	1 cut(s)	575
BspFNI	CGCG	3 cut(s)	63, 324, 644
BspLI	GGNNCC	2 cut(s)	67, 217
BspMI	ACCTGC	1 cut(s)	778
BspPI	GGATC	1 cut(s)	665
BspT104I	TTCGAA	1 cut(s)	989
BspT107I	GGYRCC	1 cut(s)	215
BsrBI	CCGCTC	1 cut(s)	469
BsrFI	RCCGGY	2 cut(s)	486, 592
BsrGI	TGTACA	2 cut(s)	684, 1007
BsrI	ACTGG	2 cut(s)	401, 970
BssAI	RCCGGY	2 cut(s)	486, 592
BssECI	CCNNGG	3 cut(s)	235, 936, 1149
BssMI	GATC	3 cut(s)	670, 806, 1084
BssNI	GRCGYC	1 cut(s)	240
BssT1I	CCWWGG	2 cut(s)	936, 1149
Bst2UI	CCWGG	3 cut(s)	236, 392, 610
Bst4CI	ACNGT	3 cut(s)	193, 220, 1102
BstACI	GRCGYC	1 cut(s)	240
BstAPI	GCANNNNNTGC	1 cut(s)	871
BstAUI	TGTACA	2 cut(s)	684, 1007
BstBI	TTCGAA	1 cut(s)	989
BstC8I	GCNNGC	3 cut(s)	50, 437, 488
BstDEI	CTNAG	2 cut(s)	440, 914
BstENI	CCTNNNNNAGG	1 cut(s)	203
BstFNI	CGCG	3 cut(s)	63, 324, 644
BstH2I	RGCGCY	3 cut(s)	343, 487, 797
BstHHI	GCGC	7 cut(s)	63, 342, 486, 644, 787, 796, 985
BstKTI	GATC	3 cut(s)	673, 809, 1087
BstMAI	GTCTC	2 cut(s)	136, 379
BstMBI	GATC	3 cut(s)	670, 806, 1084
BstMCI	CGRYCG	3 cut(s)	187, 593, 809
BstNI	CCWGG	3 cut(s)	236, 392, 610
BstSCI	CCNGG	4 cut(s)	234, 390, 608, 1134
BstSFI	CTRYAG	2 cut(s)	1026, 1140
BstSLI	GKGCMC	1 cut(s)	726
BstUI	CGCG	3 cut(s)	63, 324, 644
BstV1I	GCAGC	7 cut(s)	70, 124, 648, 783, 814, 826, 877
BstV2I	GAAGAC	2 cut(s)	256, 394
BstZI	CGGCCG	2 cut(s)	184, 590
BtsIMutI	CAGTG	1 cut(s)	977
BveI	ACCTGC	1 cut(s)	778
Cac8I	GCNNGC	3 cut(s)	50, 437, 488
CaiI	CAGNNNCTG	1 cut(s)	1016
CfoI	GCGC	7 cut(s)	63, 342, 486, 644, 787, 796, 985
Cfr10I	RCCGGY	2 cut(s)	486, 592
Cfr13I	GGNCC	3 cut(s)	65, 489, 1158
CseI	GACGC	3 cut(s)	229, 292, 633
Csp6I	GTAC	5 cut(s)	616, 631, 685, 1008, 1090
CviAII	CATG	3 cut(s)	328, 733, 1189
CviQI	GTAC	5 cut(s)	616, 631, 685, 1008, 1090
DdeI	CTNAG	2 cut(s)	440, 914
DpnI	GATC	3 cut(s)	672, 808, 1086
DpnII	GATC	3 cut(s)	670, 806, 1084
DrdI	GACNNNNNNGTC	1 cut(s)	218
DseDI	GACNNNNNNGTC	1 cut(s)	218
EaeI	YGGCCR	5 cut(s)	184, 454, 590, 1146, 1191
EagI	CGGCCG	2 cut(s)	184, 590
EciI	GGCGGA	3 cut(s)	61, 486, 591
EclXI	CGGCCG	2 cut(s)	184, 590
Eco130I	CCWWGG	2 cut(s)	936, 1149
Eco24I	GRGCYC	1 cut(s)	156
Eco52I	CGGCCG	2 cut(s)	184, 590
Eco57I	CTGAAG	1 cut(s)	188
Eco88I	CYCGRG	3 cut(s)	149, 654, 818
EcoNI	CCTNNNNNAGG	1 cut(s)	203
EcoRI	GAATTC	2 cut(s)	556, 889
EcoRII	CCWGG	3 cut(s)	234, 390, 608
EcoT14I	CCWWGG	2 cut(s)	936, 1149
EcoT38I	GRGCYC	1 cut(s)	156
ErhI	CCWWGG	2 cut(s)	936, 1149
Esp3I	CGTCTC	1 cut(s)	136
FaeI	CATG	3 cut(s)	331, 736, 1192
FaiI	YATR	8 cut(s)	329, 371, 585, 734, 1028, 1190, 1212, 1222
FaqI	GGGAC	2 cut(s)	206, 743
FatI	CATG	3 cut(s)	327, 732, 1188
FauI	CCCGC	4 cut(s)	18, 329, 471, 627
FbaI	TGATCA	1 cut(s)	1084
FblI	GTMKAC	4 cut(s)	210, 306, 357, 957
FokI	GGATG	9 cut(s)	92, 239, 333, 365, 921, 953, 965, 992, 1079
FriOI	GRGCYC	1 cut(s)	156
FspBI	CTAG	2 cut(s)	528, 1197
FspI	TGCGCA	1 cut(s)	786
GlaI	GCGC	7 cut(s)	62, 341, 485, 643, 786, 795, 984
GsaI	CCCAGC	1 cut(s)	411
GsuI	CTGGAG	3 cut(s)	374, 881, 923
HaeII	RGCGCY	3 cut(s)	343, 487, 797
HapII	CCGG	6 cut(s)	109, 366, 487, 576, 593, 1135
HgaI	GACGC	3 cut(s)	229, 292, 633
HhaI	GCGC	7 cut(s)	63, 342, 486, 644, 787, 796, 985
Hin1I	GRCGYC	1 cut(s)	240
Hin1II	CATG	3 cut(s)	331, 736, 1192
Hin6I	GCGC	7 cut(s)	61, 340, 484, 642, 785, 794, 983
HinP1I	GCGC	7 cut(s)	61, 340, 484, 642, 785, 794, 983
HincII	GTYRAC	5 cut(s)	196, 211, 313, 358, 958
HindII	GTYRAC	5 cut(s)	196, 211, 313, 358, 958
HindIII	AAGCTT	1 cut(s)	707
HinfI	GANTC	4 cut(s)	278, 505, 547, 598
HpaII	CCGG	6 cut(s)	109, 366, 487, 576, 593, 1135
HphI	GGTGA	4 cut(s)	163, 235, 607, 1124
Hpy166II	GTNNAC	9 cut(s)	171, 196, 211, 307, 313, 358, 685, 724, 958
Hpy188I	TCNGA	8 cut(s)	19, 504, 663, 675, 811, 885, 895, 1018
Hpy188III	TCNNGA	6 cut(s)	40, 223, 576, 820, 860, 902
Hpy8I	GTNNAC	9 cut(s)	171, 196, 211, 307, 313, 358, 685, 724, 958
Hpy99I	CGWCG	9 cut(s)	37, 125, 169, 215, 263, 628, 649, 679, 962
HpyAV	CCTTC	4 cut(s)	153, 212, 826, 844
HpyCH4III	ACNGT	3 cut(s)	193, 220, 1102
HpyCH4IV	ACGT	4 cut(s)	35, 167, 309, 614
HpyCH4V	TGCA	6 cut(s)	724, 874, 1063, 1165, 1171, 1217
HpyF3I	CTNAG	2 cut(s)	440, 914
HpySE526I	ACGT	4 cut(s)	35, 167, 309, 614
Hsp92I	GRCGYC	1 cut(s)	240
Hsp92II	CATG	3 cut(s)	331, 736, 1192
HspAI	GCGC	7 cut(s)	61, 340, 484, 642, 785, 794, 983
Kpn2I	TCCGGA	1 cut(s)	575
KroI	GCCGGC	1 cut(s)	486
KroNI	GCCGGC	1 cut(s)	488
Ksp22I	TGATCA	1 cut(s)	1084
Kzo9I	GATC	3 cut(s)	670, 806, 1084
LmnI	GCTCC	6 cut(s)	19, 301, 416, 811, 862, 1120
Lsp1109I	GCAGC	7 cut(s)	70, 124, 648, 783, 814, 826, 877
LweI	GCATC	5 cut(s)	14, 828, 952, 970, 1158
MaeI	CTAG	2 cut(s)	528, 1197
MaeII	ACGT	4 cut(s)	35, 167, 309, 614
MaeIII	GTNAC	2 cut(s)	241, 458
MalI	GATC	3 cut(s)	672, 808, 1086
MbiI	CCGCTC	1 cut(s)	469
MboI	GATC	3 cut(s)	670, 806, 1084
MboII	GAAGA	7 cut(s)	101, 256, 394, 561, 564, 760, 1043
MfeI	CAATTG	1 cut(s)	869
MhlI	GDGCHC	3 cut(s)	54, 156, 726
MluCI	AATT	4 cut(s)	556, 869, 889, 1124
MlyI	GAGTC	2 cut(s)	272, 541
MmeI	TCCRAC	3 cut(s)	698, 981, 1029
MroI	TCCGGA	1 cut(s)	575
MroNI	GCCGGC	1 cut(s)	486
MslI	CAYNNNNRTG	1 cut(s)	351
MspA1I	CMGCKG	2 cut(s)	639, 1145
MspI	CCGG	6 cut(s)	109, 366, 487, 576, 593, 1135
MspR9I	CCNGG	4 cut(s)	236, 392, 610, 1136
MunI	CAATTG	1 cut(s)	869
Mva1269I	GAATGC	1 cut(s)	700
MvaI	CCWGG	3 cut(s)	236, 392, 610
MvnI	CGCG	3 cut(s)	63, 324, 644
NaeI	GCCGGC	1 cut(s)	488
NciI	CCSGG	1 cut(s)	1136
NdeII	GATC	3 cut(s)	670, 806, 1084
NgoMIV	GCCGGC	1 cut(s)	486
NlaIII	CATG	3 cut(s)	331, 736, 1192
NlaIV	GGNNCC	2 cut(s)	67, 217
NmeAIII	GCCGAG	1 cut(s)	568
NmuCI	GTSAC	2 cut(s)	241, 458
NsbI	TGCGCA	1 cut(s)	786
NspV	TTCGAA	1 cut(s)	989
PaeR7I	CTCGAG	1 cut(s)	149
PaqCI	CACCTGC	1 cut(s)	778
PcsI	WCGNNNNNNNCGW	5 cut(s)	126, 189, 216, 300, 620
PctI	GAATGC	1 cut(s)	700
PdiI	GCCGGC	1 cut(s)	488
PfeI	GAWTC	2 cut(s)	505, 598
Pfl23II	CGTACG	1 cut(s)	630
PflFI	GACNNNGTC	3 cut(s)	329, 398, 550
PflMI	CCANNNNNTGG	1 cut(s)	976
PfoI	TCCNGGA	1 cut(s)	390
Ple19I	CGATCG	1 cut(s)	809
PleI	GAGTC	2 cut(s)	272, 541
PpsI	GAGTC	2 cut(s)	272, 541
Psp6I	CCWGG	3 cut(s)	234, 390, 608
PspFI	CCCAGC	1 cut(s)	407
PspGI	CCWGG	3 cut(s)	234, 390, 608
PspLI	CGTACG	1 cut(s)	630
PspN4I	GGNNCC	2 cut(s)	67, 217
PspPI	GGNCC	3 cut(s)	65, 489, 1158
PspXI	VCTCGAGB	1 cut(s)	149
PstNI	CAGNNNCTG	1 cut(s)	1016
PsyI	GACNNNGTC	3 cut(s)	329, 398, 550
PvuI	CGATCG	1 cut(s)	809
RsaI	GTAC	5 cut(s)	617, 632, 686, 1009, 1091
RsaNI	GTAC	5 cut(s)	616, 631, 685, 1008, 1090
RseI	CAYNNNNRTG	1 cut(s)	351
SalI	GTCGAC	3 cut(s)	209, 356, 956
Sau3AI	GATC	3 cut(s)	670, 806, 1084
Sau96I	GGNCC	3 cut(s)	65, 489, 1158
ScaI	AGTACT	1 cut(s)	1091
SchI	GAGTC	2 cut(s)	272, 541
ScrFI	CCNGG	4 cut(s)	236, 392, 610, 1136
SduI	GDGCHC	3 cut(s)	54, 156, 726
SfaNI	GCATC	5 cut(s)	14, 828, 952, 970, 1158
SfcI	CTRYAG	2 cut(s)	1026, 1140
Sfr274I	CTCGAG	1 cut(s)	149
SfuI	TTCGAA	1 cut(s)	989
SlaI	CTCGAG	1 cut(s)	149
SmiMI	CAYNNNNRTG	1 cut(s)	351
SmlI	CTYRAG	2 cut(s)	149, 1093
SmoI	CTYRAG	2 cut(s)	149, 1093
Sse9I	AATT	4 cut(s)	556, 869, 889, 1124
SspMI	CTAG	2 cut(s)	528, 1197
StyD4I	CCNGG	4 cut(s)	234, 390, 608, 1134
StyI	CCWWGG	2 cut(s)	936, 1149
TaaI	ACNGT	3 cut(s)	193, 220, 1102
TaiI	ACGT	4 cut(s)	38, 170, 312, 617
TaqI	TCGA	9 cut(s)	150, 210, 276, 357, 423, 554, 560, 957, 989
TaqII	GACCGA	1 cut(s)	680
TasI	AATT	4 cut(s)	556, 869, 889, 1124
TatI	WGTACW	3 cut(s)	684, 1007, 1089
TauI	GCSGC	7 cut(s)	66, 189, 469, 642, 802, 1148, 1196
TfiI	GAWTC	2 cut(s)	505, 598
TscAI	CASTG	1 cut(s)	977
TseFI	GTSAC	2 cut(s)	241, 458
TseI	GCWGC	7 cut(s)	58, 112, 636, 796, 802, 814, 865
Tsp45I	GTSAC	2 cut(s)	241, 458
TspDTI	ATGAA	1 cut(s)	902
TspGWI	ACGGA	1 cut(s)	692
TspRI	CASTG	1 cut(s)	977
Tth111I	GACNNNGTC	3 cut(s)	329, 398, 550
Van91I	CCANNNNNTGG	1 cut(s)	976
VneI	GTGCAC	1 cut(s)	722
XagI	CCTNNNNNAGG	1 cut(s)	203
XapI	RAATTY	2 cut(s)	556, 889
XcmI	CCANNNNNNNNNTGG	1 cut(s)	325
XhoI	CTCGAG	1 cut(s)	149
XmiI	GTMKAC	4 cut(s)	210, 306, 357, 957
XspI	CTAG	2 cut(s)	528, 1197
ZrmI	AGTACT	1 cut(s)	1091

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.