zinc finger CCCH domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g05690 FvH4_4g12500 |
| rosa_chinensis | RchiOBHm_Chr2g0091341 |
| rosa_laevigata | RLG00000016213 |
| rosa_rugosa | Rorug02G0016500 |
| rosa_samantha | Rh2AG061400 Rh2BG060800 Rh2CG062800 Rh2DG061400 |
| rosa_wichuraiana | Rw2G004830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 4 cut(s) | 76, 104, 167, 179 |
| AclWI | GGATC | 2 cut(s) | 253, 286 |
| AcsI | RAATTY | 1 cut(s) | 333 |
| AcuI | CTGAAG | 2 cut(s) | 9, 27 |
| AgsI | TTSAA | 2 cut(s) | 244, 343 |
| AjnI | CCWGG | 1 cut(s) | 418 |
| AluBI | AGCT | 2 cut(s) | 93, 154 |
| AluI | AGCT | 2 cut(s) | 93, 154 |
| Alw26I | GTCTC | 3 cut(s) | 218, 352, 530 |
| AlwI | GGATC | 2 cut(s) | 253, 286 |
| ApoI | RAATTY | 1 cut(s) | 333 |
| AsuHPI | GGTGA | 1 cut(s) | 479 |
| AsuII | TTCGAA | 1 cut(s) | 231 |
| BanII | GRGCYC | 1 cut(s) | 135 |
| BauI | CACGAG | 1 cut(s) | 455 |
| BbsI | GAAGAC | 1 cut(s) | 35 |
| BccI | CCATC | 3 cut(s) | 188, 269, 458 |
| BciT130I | CCWGG | 1 cut(s) | 420 |
| BcoDI | GTCTC | 3 cut(s) | 218, 352, 530 |
| BfaI | CTAG | 1 cut(s) | 149 |
| BisI | GCNGC | 1 cut(s) | 76 |
| BlsI | GCNGC | 1 cut(s) | 77 |
| Bme1390I | CCNGG | 1 cut(s) | 420 |
| BmrFI | CCNGG | 1 cut(s) | 420 |
| BpiI | GAAGAC | 1 cut(s) | 35 |
| Bpu14I | TTCGAA | 1 cut(s) | 231 |
| BpuEI | CTTGAG | 1 cut(s) | 248 |
| BseBI | CCWGG | 1 cut(s) | 420 |
| BseGI | GGATG | 2 cut(s) | 280, 466 |
| BseMII | CTCAG | 2 cut(s) | 87, 393 |
| BseRI | GAGGAG | 1 cut(s) | 185 |
| BsgI | GTGCAG | 1 cut(s) | 34 |
| BslFI | GGGAC | 1 cut(s) | 463 |
| BsmAI | GTCTC | 3 cut(s) | 218, 352, 530 |
| BsmFI | GGGAC | 1 cut(s) | 463 |
| BsmI | GAATGC | 1 cut(s) | 181 |
| Bsp119I | TTCGAA | 1 cut(s) | 231 |
| Bsp1286I | GDGCHC | 1 cut(s) | 135 |
| Bsp143I | GATC | 4 cut(s) | 258, 278, 487, 522 |
| BspACI | CCGC | 4 cut(s) | 76, 104, 167, 179 |
| BspCNI | CTCAG | 2 cut(s) | 88, 394 |
| BspPI | GGATC | 2 cut(s) | 253, 286 |
| BspT104I | TTCGAA | 1 cut(s) | 231 |
| BssMI | GATC | 4 cut(s) | 258, 278, 487, 522 |
| BssSI | CACGAG | 1 cut(s) | 455 |
| Bst2BI | CACGAG | 1 cut(s) | 455 |
| Bst2UI | CCWGG | 1 cut(s) | 420 |
| Bst6I | CTCTTC | 1 cut(s) | 304 |
| BstBI | TTCGAA | 1 cut(s) | 231 |
| BstDEI | CTNAG | 4 cut(s) | 96, 402, 526, 552 |
| BstF5I | GGATG | 2 cut(s) | 280, 466 |
| BstKTI | GATC | 4 cut(s) | 261, 281, 490, 525 |
| BstMAI | GTCTC | 3 cut(s) | 218, 352, 530 |
| BstMBI | GATC | 4 cut(s) | 258, 278, 487, 522 |
| BstNI | CCWGG | 1 cut(s) | 420 |
| BstSCI | CCNGG | 1 cut(s) | 418 |
| BstV2I | GAAGAC | 1 cut(s) | 35 |
| BstX2I | RGATCY | 1 cut(s) | 258 |
| BstYI | RGATCY | 1 cut(s) | 258 |
| BtsCI | GGATG | 2 cut(s) | 280, 466 |
| CviAII | CATG | 2 cut(s) | 323, 491 |
| CviJI | RGCY | 4 cut(s) | 93, 133, 154, 400 |
| CviKI_1 | RGCY | 4 cut(s) | 93, 133, 154, 400 |
| DdeI | CTNAG | 4 cut(s) | 96, 402, 526, 552 |
| DpnI | GATC | 4 cut(s) | 260, 280, 489, 524 |
| DpnII | GATC | 4 cut(s) | 258, 278, 487, 522 |
| DraI | TTTAAA | 1 cut(s) | 288 |
| Eam1104I | CTCTTC | 1 cut(s) | 304 |
| EarI | CTCTTC | 1 cut(s) | 304 |
| Eco24I | GRGCYC | 1 cut(s) | 135 |
| Eco57I | CTGAAG | 2 cut(s) | 9, 27 |
| EcoRII | CCWGG | 1 cut(s) | 418 |
| EcoT38I | GRGCYC | 1 cut(s) | 135 |
| FaeI | CATG | 2 cut(s) | 326, 494 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 194, 226 |
| FaqI | GGGAC | 1 cut(s) | 463 |
| FatI | CATG | 2 cut(s) | 322, 490 |
| FauNDI | CATATG | 1 cut(s) | 429 |
| Fnu4HI | GCNGC | 1 cut(s) | 76 |
| FokI | GGATG | 2 cut(s) | 287, 473 |
| FriOI | GRGCYC | 1 cut(s) | 135 |
| Fsp4HI | GCNGC | 1 cut(s) | 76 |
| FspBI | CTAG | 1 cut(s) | 149 |
| GluI | GCNGC | 1 cut(s) | 76 |
| Hin1II | CATG | 2 cut(s) | 326, 494 |
| HinfI | GANTC | 3 cut(s) | 218, 240, 548 |
| HphI | GGTGA | 1 cut(s) | 479 |
| Hpy188I | TCNGA | 4 cut(s) | 97, 223, 379, 547 |
| Hpy188III | TCNNGA | 1 cut(s) | 149 |
| HpyAV | CCTTC | 1 cut(s) | 43 |
| HpyCH4V | TGCA | 2 cut(s) | 51, 501 |
| HpyF3I | CTNAG | 4 cut(s) | 96, 402, 526, 552 |
| Hsp92II | CATG | 2 cut(s) | 326, 494 |
| Kzo9I | GATC | 4 cut(s) | 258, 278, 487, 522 |
| LpnPI | CCDG | 4 cut(s) | 18, 405, 414, 432 |
| MaeI | CTAG | 1 cut(s) | 149 |
| MaeIII | GTNAC | 1 cut(s) | 65 |
| MalI | GATC | 4 cut(s) | 260, 280, 489, 524 |
| MboI | GATC | 4 cut(s) | 258, 278, 487, 522 |
| MboII | GAAGA | 5 cut(s) | 12, 15, 35, 321, 452 |
| MfeI | CAATTG | 1 cut(s) | 70 |
| MflI | RGATCY | 1 cut(s) | 258 |
| MhlI | GDGCHC | 1 cut(s) | 135 |
| MluCI | AATT | 3 cut(s) | 70, 333, 518 |
| MmeI | TCCRAC | 1 cut(s) | 186 |
| MnlI | CCTC | 6 cut(s) | 107, 163, 208, 272, 322, 451 |
| MseI | TTAA | 2 cut(s) | 287, 390 |
| MslI | CAYNNNNRTG | 1 cut(s) | 459 |
| MspR9I | CCNGG | 1 cut(s) | 420 |
| MunI | CAATTG | 1 cut(s) | 70 |
| Mva1269I | GAATGC | 1 cut(s) | 181 |
| MvaI | CCWGG | 1 cut(s) | 420 |
| NdeI | CATATG | 1 cut(s) | 429 |
| NdeII | GATC | 4 cut(s) | 258, 278, 487, 522 |
| NlaIII | CATG | 2 cut(s) | 326, 494 |
| NmuCI | GTSAC | 1 cut(s) | 65 |
| NspV | TTCGAA | 1 cut(s) | 231 |
| PctI | GAATGC | 1 cut(s) | 181 |
| PfeI | GAWTC | 3 cut(s) | 218, 240, 548 |
| PkrI | GCNGC | 1 cut(s) | 77 |
| Psp6I | CCWGG | 1 cut(s) | 418 |
| PspGI | CCWGG | 1 cut(s) | 418 |
| PsuI | RGATCY | 1 cut(s) | 258 |
| RseI | CAYNNNNRTG | 1 cut(s) | 459 |
| SaqAI | TTAA | 2 cut(s) | 287, 390 |
| SatI | GCNGC | 1 cut(s) | 76 |
| Sau3AI | GATC | 4 cut(s) | 258, 278, 487, 522 |
| ScrFI | CCNGG | 1 cut(s) | 420 |
| SduI | GDGCHC | 1 cut(s) | 135 |
| SetI | ASST | 4 cut(s) | 13, 95, 156, 164 |
| SfuI | TTCGAA | 1 cut(s) | 231 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 459 |
| SmlI | CTYRAG | 1 cut(s) | 263 |
| SmoI | CTYRAG | 1 cut(s) | 263 |
| Sse9I | AATT | 3 cut(s) | 70, 333, 518 |
| SsiI | CCGC | 4 cut(s) | 76, 104, 167, 179 |
| SspMI | CTAG | 1 cut(s) | 149 |
| StyD4I | CCNGG | 1 cut(s) | 418 |
| TaqI | TCGA | 2 cut(s) | 231, 281 |
| TasI | AATT | 3 cut(s) | 70, 333, 518 |
| TauI | GCSGC | 1 cut(s) | 78 |
| TfiI | GAWTC | 3 cut(s) | 218, 240, 548 |
| Tru1I | TTAA | 2 cut(s) | 287, 390 |
| Tru9I | TTAA | 2 cut(s) | 287, 390 |
| TseFI | GTSAC | 1 cut(s) | 65 |
| Tsp45I | GTSAC | 1 cut(s) | 65 |
| TspDTI | ATGAA | 3 cut(s) | 327, 446, 486 |
| TspGWI | ACGGA | 1 cut(s) | 252 |
| XapI | RAATTY | 1 cut(s) | 333 |
| XbaI | TCTAGA | 1 cut(s) | 148 |
| XspI | CTAG | 1 cut(s) | 149 |