Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0010403

Physical Location & Seq

Genomic Coordinates Reverse (-)

18546951 .. 18553282

Gene Structure 6332 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g14950.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1794 bp

ATGTGCGACCATTTCAAAGCGAGGCGAGGTTCTCGGAAAGTAAGAGGGAAGAGAGAGAGAGAGAGAGAGAGGGCGATGACGATGGCGATGCTAGAGAGCATTGTCGGTGTCCTTATGCTGCTTTTCATCCTCCTCCTCATCTTCCTCGCCTGTAAACCATGGCGCCTCTTCTCCTCCTCTTCTCGCTCCCAACGCTCTATCACTATCAAGGCTGGTGATCTTGACAGACCCCTTGTTTCGGATGATGCGGATCTAGTCCGGAACCAAGGTAATGAACTTCCAAGAGGTTATGATCTAGAGGGAGCATGTTTTCAAAATGAAGGGCATTTGCGCTCACAAGGACTTGTATATAAACAAAGGCTTCCCAACACAGCTCCCAATTCAACTCAAAGTGATAGCTTGGTTCTAGATGTGATCTCTGATGCTTCTGAAGACATTGTAGTTGGCCAGACACTTAAGCGTCCATTGTTGGCCCACCAGTTTGTTGAAGATCAAAGGAGTAGTAGGCAAAATTTAGAACAAGATAGATTCCAACAGTTTGTGCCCAAGGAGCCCTTAGATAAAAGAACATGCCTCAACCTGGAGGTCATATCTGGTCCTTCCCGTGGACTCCGTTATTCTATACCGTCAACAAACTCCTCTAGGCTTCCTCTGACTCTTGGAAGGGTTCCTCCGAGTGATTTATTATTAAAGGATTCAGAGGTCTCAGGAAAGCATGCATCGATAAACTGGAACTTAAATAAAATGAAATGGGAGTTGGTGGACATGGGCAGCCTTAATGGAACACTTCTAAATTCTCTGCCAGTTAATAATCCTGATACAGGAAGTAGACAGTGGGGTGACCCAGTGGTGCTTGCAAGTGGAGACGTGATAACTCTTGGAACCACCTCAAAAGTATTTGTTCATATTTCATCCCAAAATGAGAGTCAGGTTCCCTTTGGAGTTGGTGTGGCTTCCGATCCCATGGCTCTTCGTCGTGGAGGAAAGAAGCTGCCTATGGAAGATGTGTGCTACTATCAATGGCCTCTTGATGGGATTGATCAGTTCGGCATATTTGGTATTTGTGATGGACACGGTGGAGCAGAGGCTGCCAAATCTGCTAGCAAGCTGCTACCAGAGATAGTTGCTAATCTCTTGTCAGATTCACTAAAAAGGGAGAGGGTTCTACTGCAATGTGATGCTTCAGATGTTCTTAGGGATGCTTTTTATCAGACAGAAGCAAGCTTGAATTACCATTATGAGGGTTGTACTGCGACTGTGCTTCTTGTTTGGACTGATGGTGATGACAATTTCTTTGCACAATGTGCAAATCTTGGGGATTCAGCTTGTGTTATAAATGTCAATGGGAAACAAATGAAGATGACAGAGGACCATAGGATTAGTAGTTATACTGAAAGACTCCGGATCCAGGAAACTGGAGAGCCATTGAAAGAGGGAGAAACACGTCTATGTGGTTTGAACCTTGCTCGAATGCTTGGAGACAAGTTTCTTAAGCAGCAGGATTCCCGCTTCAGTTCAGATCCTTTTATCAGCCAAGTGGTACATATTGATCAAGGCAGCAAAGCATTTGCACTTATGGCCAGTGATGGCTTTTGGGACGTCATTAGTGCAAAAAAGGCAGTTCAGCTAGTTCTGCAGACGAGGGAGAGATGCCCGACGGATGGGGAGAATTTGGCAGAAAAGATTGCAAATATGTTATTGAGTGAGGCTAGAACAGTGCGTACAAAGGATAATACCTCTATTGTTTTCTTAGATTTTGACAGTTCTAGAGTCACATGTAAAGGTGGATTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004721 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019538 GO:0036211 GO:0042578 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050408 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FHA PP2C

Protein Analysis

598

Amino Acids

66.29

Weight (kDa)

6.36

Isoelectric Point (pI)

43.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Yop-YscD_cpl	PF16697	195 - 302	1.1e-07	Inner membrane component of T3SS, cytoplasmic domain
FHA	PF00498	219 - 294	6.1e-13	FHA domain
PP2C	PF00481	325 - 578	2.6e-44	Protein phosphatase 2C
PP2C_2	PF13672	351 - 545	9.4e-08	Protein phosphatase 2C

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010403)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19280 AT5G19280
fragaria_vesca	FvH4_4g14950 FvH4_4g14950
malus_domestica	MD13G1186700.v1.1 MD16G1187600.v1.1
prunus_persica	Prupe.1G154400_v2.0.a1 Prupe.1G154400_v2.0.a1 Prupe.1G154400_v2.0.a1
pyrus_communis	pycom13g16160 pycom16g15740
rosa_chinensis	RchiOBHm_Chr4g0417151
rosa_laevigata	RLG00000007927
rosa_multiflora	Rmu_sc0000646.1_g000022
rosa_roxburghii	Rroxscaffold_5G00360970
rosa_rugosa	Rorug04G0146200
rosa_samantha	Rh4AG209000 Rh4BG205900 Rh4CG220000 Rh4DG206700
rosa_wichuraiana	Rw4G017700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1334
AatII	GACGTC	1 cut(s)	1602
AccB1I	GGYRCC	1 cut(s)	162
AccI	GTMKAC	1 cut(s)	829
AccIII	TCCGGA	2 cut(s)	258, 1401
AciI	CCGC	2 cut(s)	248, 1507
AclWI	GGATC	5 cut(s)	258, 953, 1399, 1412, 1514
AcoI	YGGCCR	2 cut(s)	445, 1578
AcsI	RAATTY	3 cut(s)	511, 793, 1669
AcuI	CTGAAG	3 cut(s)	450, 1167, 1495
AcyI	GRCGYC	2 cut(s)	163, 1599
AdeI	CACNNNGTG	1 cut(s)	1304
AfaI	GTAC	3 cut(s)	1249, 1542, 1723
AfiI	CCNNNNNNNGG	8 cut(s)	238, 580, 605, 821, 1031, 1240, 1408, 1661
AflII	CTTAAG	2 cut(s)	455, 1490
AflIII	ACRYGT	2 cut(s)	1442, 1775
AgsI	TTSAA	7 cut(s)	16, 314, 384, 488, 1228, 1429, 1459
AjiI	CACGTC	2 cut(s)	868, 1445
AjnI	CCWGG	2 cut(s)	579, 1407
AjuI	GAANNNNNNNTTGG	2 cut(s)	740, 772
AluBI	AGCT	7 cut(s)	374, 399, 991, 1108, 1224, 1325, 1627
AluI	AGCT	7 cut(s)	374, 399, 991, 1108, 1224, 1325, 1627
Alw26I	GTCTC	3 cut(s)	709, 858, 1473
AlwI	GGATC	5 cut(s)	258, 953, 1399, 1412, 1514
AlwNI	CAGNNNCTG	1 cut(s)	1088
Aor13HI	TCCGGA	2 cut(s)	258, 1401
AoxI	GGCC	4 cut(s)	445, 471, 1022, 1578
ApeKI	GCWGC	7 cut(s)	118, 771, 991, 1088, 1108, 1495, 1557
ApoI	RAATTY	3 cut(s)	511, 793, 1669
ArsI	GACNNNNNNTTYG	4 cut(s)	910, 942, 1277, 1309
AspLEI	GCGC	2 cut(s)	165, 333
AspS9I	GGNCC	3 cut(s)	472, 596, 1369
AsuHPI	GGTGA	3 cut(s)	227, 851, 1292
AsuNHI	GCTAGC	1 cut(s)	1100
AvaII	GGWCC	2 cut(s)	596, 1369
BaeGI	GKGCMC	1 cut(s)	546
BalI	TGGCCA	2 cut(s)	447, 1580
BamHI	GGATCC	1 cut(s)	1404
BanI	GGYRCC	1 cut(s)	162
BanII	GRGCYC	1 cut(s)	555
BbsI	GAAGAC	1 cut(s)	438
BbvI	GCAGC	7 cut(s)	105, 783, 978, 1075, 1095, 1507, 1569
BccI	CCATC	6 cut(s)	76, 1025, 1061, 1271, 1580, 1655
BcgI	CGANNNNNNTGC	2 cut(s)	70, 104
BciT130I	CCWGG	2 cut(s)	581, 1409
BclI	TGATCA	2 cut(s)	1039, 1549
BcoDI	GTCTC	3 cut(s)	709, 858, 1473
BfaI	CTAG	9 cut(s)	92, 254, 296, 407, 642, 1101, 1628, 1710, 1767
BfmI	CTRYAG	1 cut(s)	1634
BfoI	RGCGCY	1 cut(s)	166
BfrI	CTTAAG	2 cut(s)	455, 1490
BisI	GCNGC	7 cut(s)	119, 772, 992, 1089, 1109, 1496, 1558
BlsI	GCNGC	7 cut(s)	120, 773, 993, 1090, 1110, 1497, 1559
Bme1390I	CCNGG	2 cut(s)	581, 1409
Bme18I	GGWCC	2 cut(s)	596, 1369
BmgBI	CACGTC	2 cut(s)	868, 1445
BmgT120I	GGNCC	3 cut(s)	472, 596, 1369
BmiI	GGNNCC	7 cut(s)	164, 263, 552, 669, 883, 933, 1406
BmrFI	CCNGG	2 cut(s)	581, 1409
BmrI	ACTGGG	1 cut(s)	839
BmsI	GCATC	7 cut(s)	78, 235, 412, 728, 1168, 1189, 1640
BmtI	GCTAGC	1 cut(s)	1104
BmuI	ACTGGG	1 cut(s)	839
BpiI	GAAGAC	1 cut(s)	438
BpmI	CTGGAG	2 cut(s)	602, 1437
Bsa29I	ATCGAT	1 cut(s)	722
BsaBI	GATNNNNATC	1 cut(s)	249
BsaHI	GRCGYC	2 cut(s)	163, 1599
BsaI	GGTCTC	1 cut(s)	709
BsaJI	CCNNGG	5 cut(s)	158, 265, 546, 604, 963
BsaWI	WCCGGW	2 cut(s)	258, 1401
BsaXI	ACNNNNNCTCC	2 cut(s)	933, 963
Bsc4I	CCNNNNNNNGG	8 cut(s)	238, 580, 605, 821, 1031, 1240, 1408, 1661
Bse1I	ACTGG	6 cut(s)	478, 734, 803, 845, 1420, 1581
Bse3DI	GCAATG	1 cut(s)	1178
Bse8I	GATNNNNATC	1 cut(s)	249
BseAI	TCCGGA	2 cut(s)	258, 1401
BseBI	CCWGG	2 cut(s)	581, 1409
BseCI	ATCGAT	1 cut(s)	722
BseDI	CCNNGG	5 cut(s)	158, 265, 546, 604, 963
BseGI	GGATG	5 cut(s)	126, 247, 911, 1204, 1666
BseJI	GATNNNNATC	1 cut(s)	249
BseLI	CCNNNNNNNGG	8 cut(s)	238, 580, 605, 821, 1031, 1240, 1408, 1661
BseMI	GCAATG	1 cut(s)	1178
BseMII	CTCAG	1 cut(s)	720
BseNI	ACTGG	6 cut(s)	478, 734, 803, 845, 1420, 1581
BseRI	GAGGAG	5 cut(s)	122, 125, 163, 166, 628
BseSI	GKGCMC	1 cut(s)	546
BseXI	GCAGC	7 cut(s)	105, 783, 978, 1075, 1095, 1507, 1569
BshFI	GGCC	4 cut(s)	447, 473, 1024, 1580
BshNI	GGYRCC	1 cut(s)	162
BshVI	ATCGAT	1 cut(s)	722
BsiSI	CCGG	2 cut(s)	259, 1402
BslFI	GGGAC	1 cut(s)	1610
BslI	CCNNNNNNNGG	8 cut(s)	238, 580, 605, 821, 1031, 1240, 1408, 1661
BsmAI	GTCTC	3 cut(s)	709, 858, 1473
BsmBI	CGTCTC	1 cut(s)	858
BsmFI	GGGAC	1 cut(s)	1610
BsmI	GAATGC	1 cut(s)	1476
BsnI	GGCC	4 cut(s)	447, 473, 1024, 1580
Bso31I	GGTCTC	1 cut(s)	709
Bsp1286I	GDGCHC	2 cut(s)	546, 555
Bsp13I	TCCGGA	2 cut(s)	258, 1401
Bsp19I	CCATGG	2 cut(s)	158, 963
BspACI	CCGC	2 cut(s)	248, 1507
BspANI	GGCC	4 cut(s)	447, 473, 1024, 1580
BspCNI	CTCAG	1 cut(s)	719
BspDI	ATCGAT	1 cut(s)	722
BspEI	TCCGGA	2 cut(s)	258, 1401
BspLI	GGNNCC	7 cut(s)	164, 263, 552, 669, 883, 933, 1406
BspMAI	CTGCAG	1 cut(s)	1638
BspOI	GCTAGC	1 cut(s)	1104
BspPI	GGATC	5 cut(s)	258, 953, 1399, 1412, 1514
BspQI	GCTCTTC	1 cut(s)	975
BspT107I	GGYRCC	1 cut(s)	162
BspTI	CTTAAG	2 cut(s)	455, 1490
BspTNI	GGTCTC	1 cut(s)	709
BsrDI	GCAATG	1 cut(s)	1178
BsrI	ACTGG	6 cut(s)	478, 734, 803, 845, 1420, 1581
BssECI	CCNNGG	5 cut(s)	158, 265, 546, 604, 963
BssNI	GRCGYC	2 cut(s)	163, 1599
BssT1I	CCWWGG	4 cut(s)	158, 265, 546, 963
Bst2UI	CCWGG	2 cut(s)	581, 1409
Bst4CI	ACNGT	7 cut(s)	537, 627, 834, 1076, 1258, 1717, 1763
Bst6I	CTCTTC	4 cut(s)	44, 173, 184, 975
BstACI	GRCGYC	2 cut(s)	163, 1599
BstAFI	CTTAAG	2 cut(s)	455, 1490
BstAPI	GCANNNNNTGC	2 cut(s)	1088, 1304
BstC8I	GCNNGC	5 cut(s)	717, 855, 1102, 1106, 1222
BstDEI	CTNAG	4 cut(s)	556, 706, 1193, 1750
BstDSI	CCRYGG	3 cut(s)	158, 604, 963
BstEII	GGTNACC	1 cut(s)	839
BstENI	CCTNNNNNAGG	1 cut(s)	819
BstF5I	GGATG	5 cut(s)	126, 247, 911, 1204, 1666
BstH2I	RGCGCY	1 cut(s)	166
BstHHI	GCGC	2 cut(s)	165, 333
BstMAI	GTCTC	3 cut(s)	709, 858, 1473
BstMWI	GCNNNNNNNGC	8 cut(s)	192, 550, 1088, 1097, 1304, 1577, 1616, 1633
BstNI	CCWGG	2 cut(s)	581, 1409
BstNSI	RCATGY	4 cut(s)	309, 573, 719, 1779
BstPI	GGTNACC	1 cut(s)	839
BstSCI	CCNGG	2 cut(s)	579, 1407
BstSFI	CTRYAG	1 cut(s)	1634
BstSLI	GKGCMC	1 cut(s)	546
BstV1I	GCAGC	7 cut(s)	105, 783, 978, 1075, 1095, 1507, 1569
BstV2I	GAAGAC	1 cut(s)	438
BstX2I	RGATCY	3 cut(s)	250, 1404, 1519
BstXI	CCANNNNNNTGG	1 cut(s)	1415
BstYI	RGATCY	3 cut(s)	250, 1404, 1519
Bsu15I	ATCGAT	1 cut(s)	722
BsuRI	GGCC	4 cut(s)	447, 473, 1024, 1580
BsuTUI	ATCGAT	1 cut(s)	722
BtgI	CCRYGG	3 cut(s)	158, 604, 963
BtgZI	GCGATG	2 cut(s)	89, 101
BtrI	CACGTC	2 cut(s)	868, 1445
BtsCI	GGATG	5 cut(s)	126, 247, 911, 1204, 1666
BtsIMutI	CAGTG	4 cut(s)	839, 852, 1588, 1722
Cac8I	GCNNGC	5 cut(s)	717, 855, 1102, 1106, 1222
CaiI	CAGNNNCTG	1 cut(s)	1088
CfoI	GCGC	2 cut(s)	165, 333
Cfr13I	GGNCC	3 cut(s)	472, 596, 1369
ClaI	ATCGAT	1 cut(s)	722
CseI	GACGC	1 cut(s)	449
Csp6I	GTAC	3 cut(s)	1248, 1541, 1722
CviAII	CATG	7 cut(s)	159, 306, 570, 716, 766, 964, 1776
CviQI	GTAC	3 cut(s)	1248, 1541, 1722
DdeI	CTNAG	4 cut(s)	556, 706, 1193, 1750
DinI	GGCGCC	1 cut(s)	164
DraIII	CACNNNGTG	1 cut(s)	1304
EaeI	YGGCCR	2 cut(s)	445, 1578
Eam1104I	CTCTTC	4 cut(s)	44, 173, 184, 975
EarI	CTCTTC	4 cut(s)	44, 173, 184, 975
Eco130I	CCWWGG	4 cut(s)	158, 265, 546, 963
Eco24I	GRGCYC	1 cut(s)	555
Eco31I	GGTCTC	1 cut(s)	709
Eco47I	GGWCC	2 cut(s)	596, 1369
Eco57I	CTGAAG	3 cut(s)	450, 1167, 1495
Eco91I	GGTNACC	1 cut(s)	839
EcoNI	CCTNNNNNAGG	1 cut(s)	819
EcoO65I	GGTNACC	1 cut(s)	839
EcoRII	CCWGG	2 cut(s)	579, 1407
EcoT14I	CCWWGG	4 cut(s)	158, 265, 546, 963
EcoT22I	ATGCAT	1 cut(s)	721
EcoT38I	GRGCYC	1 cut(s)	555
EgeI	GGCGCC	1 cut(s)	164
EheI	GGCGCC	1 cut(s)	164
ErhI	CCWWGG	4 cut(s)	158, 265, 546, 963
Esp3I	CGTCTC	1 cut(s)	858
FaeI	CATG	7 cut(s)	162, 309, 573, 719, 769, 967, 1779
FalI	AAGNNNNNCTT	2 cut(s)	539, 571
FaqI	GGGAC	1 cut(s)	1610
FatI	CATG	7 cut(s)	158, 305, 569, 715, 765, 963, 1775
FauI	CCCGC	1 cut(s)	1514
FbaI	TGATCA	2 cut(s)	1039, 1549
FblI	GTMKAC	1 cut(s)	829
Fnu4HI	GCNGC	7 cut(s)	119, 772, 992, 1089, 1109, 1496, 1558
FokI	GGATG	5 cut(s)	113, 254, 898, 1211, 1673
FriOI	GRGCYC	1 cut(s)	555
Fsp4HI	GCNGC	7 cut(s)	119, 772, 992, 1089, 1109, 1496, 1558
FspBI	CTAG	9 cut(s)	92, 254, 296, 407, 642, 1101, 1628, 1710, 1767
GlaI	GCGC	2 cut(s)	164, 332
GluI	GCNGC	7 cut(s)	119, 772, 992, 1089, 1109, 1496, 1558
GsuI	CTGGAG	2 cut(s)	602, 1437
HaeII	RGCGCY	1 cut(s)	166
HaeIII	GGCC	4 cut(s)	447, 473, 1024, 1580
HapII	CCGG	2 cut(s)	259, 1402
HgaI	GACGC	1 cut(s)	449
HhaI	GCGC	2 cut(s)	165, 333
Hin1I	GRCGYC	2 cut(s)	163, 1599
Hin1II	CATG	7 cut(s)	162, 309, 573, 719, 769, 967, 1779
Hin6I	GCGC	2 cut(s)	163, 331
HinP1I	GCGC	2 cut(s)	163, 331
HincII	GTYRAC	1 cut(s)	630
HindII	GTYRAC	1 cut(s)	630
HindIII	AAGCTT	1 cut(s)	1222
HpaII	CCGG	2 cut(s)	259, 1402
HphI	GGTGA	3 cut(s)	227, 851, 1292
Hpy166II	GTNNAC	5 cut(s)	155, 608, 630, 763, 830
Hpy188III	TCNNGA	9 cut(s)	221, 259, 296, 407, 708, 815, 1028, 1402, 1767
Hpy8I	GTNNAC	5 cut(s)	155, 608, 630, 763, 830
Hpy99I	CGWCG	2 cut(s)	978, 1660
HpyAV	CCTTC	3 cut(s)	314, 609, 657
HpyCH4III	ACNGT	7 cut(s)	537, 627, 834, 1076, 1258, 1717, 1763
HpyCH4IV	ACGT	3 cut(s)	867, 1444, 1599
HpyCH4V	TGCA	9 cut(s)	719, 857, 1171, 1298, 1307, 1571, 1610, 1636, 1688
HpyF10VI	GCNNNNNNNGC	8 cut(s)	192, 550, 1088, 1097, 1304, 1577, 1616, 1633
HpyF3I	CTNAG	4 cut(s)	556, 706, 1193, 1750
HpySE526I	ACGT	3 cut(s)	867, 1444, 1599
Hsp92I	GRCGYC	2 cut(s)	163, 1599
Hsp92II	CATG	7 cut(s)	162, 309, 573, 719, 769, 967, 1779
HspAI	GCGC	2 cut(s)	163, 331
KasI	GGCGCC	1 cut(s)	162
Kpn2I	TCCGGA	2 cut(s)	258, 1401
Ksp22I	TGATCA	2 cut(s)	1039, 1549
LguI	GCTCTTC	1 cut(s)	975
LmnI	GCTCC	5 cut(s)	191, 302, 379, 550, 1079
Lsp1109I	GCAGC	7 cut(s)	105, 783, 978, 1075, 1095, 1507, 1569
LweI	GCATC	7 cut(s)	78, 235, 412, 728, 1168, 1189, 1640
MaeI	CTAG	9 cut(s)	92, 254, 296, 407, 642, 1101, 1628, 1710, 1767
MaeII	ACGT	3 cut(s)	867, 1444, 1599
MaeIII	GTNAC	2 cut(s)	839, 1771
MboII	GAAGA	9 cut(s)	61, 133, 160, 171, 443, 500, 962, 1013, 1369
MflI	RGATCY	3 cut(s)	250, 1404, 1519
MhlI	GDGCHC	2 cut(s)	546, 555
MlsI	TGGCCA	2 cut(s)	447, 1580
MluCI	AATT	6 cut(s)	379, 511, 793, 1228, 1288, 1669
MluNI	TGGCCA	2 cut(s)	447, 1580
Mly113I	GGCGCC	1 cut(s)	163
MlyI	GAGTC	5 cut(s)	603, 649, 934, 1392, 1779
MmeI	TCCRAC	1 cut(s)	556
Mox20I	TGGCCA	2 cut(s)	447, 1580
Mph1103I	ATGCAT	1 cut(s)	721
MroI	TCCGGA	2 cut(s)	258, 1401
MscI	TGGCCA	2 cut(s)	447, 1580
MseI	TTAA	6 cut(s)	456, 689, 737, 777, 807, 1491
MslI	CAYNNNNRTG	1 cut(s)	1447
Msp20I	TGGCCA	2 cut(s)	447, 1580
MspCI	CTTAAG	2 cut(s)	455, 1490
MspI	CCGG	2 cut(s)	259, 1402
MspR9I	CCNGG	2 cut(s)	581, 1409
Mva1269I	GAATGC	1 cut(s)	1476
MvaI	CCWGG	2 cut(s)	581, 1409
MwoI	GCNNNNNNNGC	8 cut(s)	192, 550, 1088, 1097, 1304, 1577, 1616, 1633
NarI	GGCGCC	1 cut(s)	163
NcoI	CCATGG	2 cut(s)	158, 963
NheI	GCTAGC	1 cut(s)	1100
NlaIII	CATG	7 cut(s)	162, 309, 573, 719, 769, 967, 1779
NlaIV	GGNNCC	7 cut(s)	164, 263, 552, 669, 883, 933, 1406
NmuCI	GTSAC	2 cut(s)	839, 1771
NsiI	ATGCAT	1 cut(s)	721
NspI	RCATGY	4 cut(s)	309, 573, 719, 1779
PaeI	GCATGC	1 cut(s)	719
PciI	ACATGT	1 cut(s)	1775
PciSI	GCTCTTC	1 cut(s)	975
PctI	GAATGC	1 cut(s)	1476
PfeI	GAWTC	5 cut(s)	528, 695, 1142, 1319, 1502
PfoI	TCCNGGA	1 cut(s)	1407
PkrI	GCNGC	7 cut(s)	120, 773, 993, 1090, 1110, 1497, 1559
PleI	GAGTC	5 cut(s)	603, 649, 933, 1392, 1778
PluTI	GGCGCC	1 cut(s)	166
PpsI	GAGTC	5 cut(s)	603, 649, 933, 1392, 1778
PscI	ACATGT	1 cut(s)	1775
PsiI	TTATAA	1 cut(s)	1334
Psp6I	CCWGG	2 cut(s)	579, 1407
PspEI	GGTNACC	1 cut(s)	839
PspGI	CCWGG	2 cut(s)	579, 1407
PspN4I	GGNNCC	7 cut(s)	164, 263, 552, 669, 883, 933, 1406
PspPI	GGNCC	3 cut(s)	472, 596, 1369
PsrI	GAACNNNNNNTAC	2 cut(s)	1705, 1737
PstI	CTGCAG	1 cut(s)	1638
PstNI	CAGNNNCTG	1 cut(s)	1088
PsuI	RGATCY	3 cut(s)	250, 1404, 1519
RsaI	GTAC	3 cut(s)	1249, 1542, 1723
RsaNI	GTAC	3 cut(s)	1248, 1541, 1722
RseI	CAYNNNNRTG	1 cut(s)	1447
SapI	GCTCTTC	1 cut(s)	975
SaqAI	TTAA	6 cut(s)	456, 689, 737, 777, 807, 1491
SatI	GCNGC	7 cut(s)	119, 772, 992, 1089, 1109, 1496, 1558
Sau96I	GGNCC	3 cut(s)	472, 596, 1369
SchI	GAGTC	5 cut(s)	603, 649, 934, 1392, 1779
ScrFI	CCNGG	2 cut(s)	581, 1409
SduI	GDGCHC	2 cut(s)	546, 555
SfaNI	GCATC	7 cut(s)	78, 235, 412, 728, 1168, 1189, 1640
SfcI	CTRYAG	1 cut(s)	1634
SfoI	GGCGCC	1 cut(s)	164
SinI	GGWCC	2 cut(s)	596, 1369
SmiMI	CAYNNNNRTG	1 cut(s)	1447
SmlI	CTYRAG	2 cut(s)	455, 1490
SmoI	CTYRAG	2 cut(s)	455, 1490
SphI	GCATGC	1 cut(s)	719
Sse9I	AATT	6 cut(s)	379, 511, 793, 1228, 1288, 1669
SsiI	CCGC	2 cut(s)	248, 1507
SspDI	GGCGCC	1 cut(s)	162
SspMI	CTAG	9 cut(s)	92, 254, 296, 407, 642, 1101, 1628, 1710, 1767
StyD4I	CCNGG	2 cut(s)	579, 1407
StyI	CCWWGG	4 cut(s)	158, 265, 546, 963
TaaI	ACNGT	7 cut(s)	537, 627, 834, 1076, 1258, 1717, 1763
TaiI	ACGT	3 cut(s)	870, 1447, 1602
TaqI	TCGA	2 cut(s)	722, 1468
TasI	AATT	6 cut(s)	379, 511, 793, 1228, 1288, 1669
TatI	WGTACW	1 cut(s)	1247
TfiI	GAWTC	5 cut(s)	528, 695, 1142, 1319, 1502
Tru1I	TTAA	6 cut(s)	456, 689, 737, 777, 807, 1491
Tru9I	TTAA	6 cut(s)	456, 689, 737, 777, 807, 1491
TscAI	CASTG	4 cut(s)	839, 852, 1588, 1722
TseFI	GTSAC	2 cut(s)	839, 1771
TseI	GCWGC	7 cut(s)	118, 771, 991, 1088, 1108, 1495, 1557
Tsp45I	GTSAC	2 cut(s)	839, 1771
TspDTI	ATGAA	7 cut(s)	115, 288, 333, 761, 893, 900, 1370
TspGWI	ACGGA	2 cut(s)	602, 1673
TspRI	CASTG	4 cut(s)	839, 852, 1588, 1722
Vha464I	CTTAAG	2 cut(s)	455, 1490
VpaK11BI	GGWCC	2 cut(s)	596, 1369
XagI	CCTNNNNNAGG	1 cut(s)	819
XapI	RAATTY	3 cut(s)	511, 793, 1669
XbaI	TCTAGA	3 cut(s)	295, 406, 1766
XceI	RCATGY	4 cut(s)	309, 573, 719, 1779
XmiI	GTMKAC	1 cut(s)	829
XspI	CTAG	9 cut(s)	92, 254, 296, 407, 642, 1101, 1628, 1710, 1767
ZraI	GACGTC	1 cut(s)	1600
Zsp2I	ATGCAT	1 cut(s)	721

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.