Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0010403

Physical Location & Seq

Genomic Coordinates Forward (+)

40076477 .. 40082550

Gene Structure 6074 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG206700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1707 bp

ATGGCGATTCTAGAGAGCATTGTCGGTGTTCTTCTCCTTATGCTGCTTTTGATCCTTATCCTCGTCTTCCTCGCCTGTAAACCATGGCGCTTCTTCTCCTCTTCTCGTTCTCGCACTATCAAGGCTGGTGAACTTGACAGACCCCTTGTTTCGGATGGTGCGGATCTGGTCCGGAACCAAGGTAATGAACTTCCAAGAGGTTACGATCTAGAGGGAGCATGTTTTCAAAATGAAGGGCATTTGCGCTCACAAGGACTTGTTTATAAACAGAGGCTTCCAACCACAGCTCCCAATTCAACTCAAAGTGATAGCTTGGTCCTAGATGTGATCTCTGATGCTTCGGAAGACATTGTAGTTGGCCAGACACTCAAGCGTCCATTGTTAGTCCATCAGTTAGTGGAAGATCAAAGGAGTAGTAGGCAGAATTTAGAACAAGATAGATTGCAACAGTTTGTGCCCAAGGATCCCTTGGATCAAAGAACATGCCTGAACCTGGAGGTCATAGCTGGTCCTTCCCATGGACTTCGGTGTTCTGTACCGTCAACAAACCCCTCTAGGCTTCCTCTGACTCTTGGAAGGGTTCCTCCAAGTGATGTATTATTAAAGGATTCAGAGGTCTCAGGAAGGCATGCATCGATAAACTGGAATTCAACTAAAATGAAATGGGAGTTGGTGGACATGGGTAGCCTTAATGGAACACTTCTAAATTCTCTGCCAATTAATAATCCTGATTCAGGAAGTAGACAGTGGGGTGACCCAATGGAGCTTGCTAGTGGAGATGTGATAACTCTTGGAACCACCTCAAAAGTTTTTGTTCATATTTCATCTCAAACTGAGAGTCGGGTTCCCTTTGGAGTTGGTGTGGCTTCAGATCCCATGGCTCTGCGTCGTGGAGGAAAGAAGCTTCCTATGGAAGATGTGTGCTACTATCAATGGCCTCTTGATGGGATTGATCAGTTTGGCATATTTGGTATCTGTGACGGACATGGCGGAGCAGAGGCTGCCAAATCTGCTAGCAAGCTGCTGCCAGAGATGGTTGCTAATCTCTTATCAGATTCACTAAAAAGGGAGAGGGTTTTATTGCAATGTGATGCTTCAGATGTTCTTAGGGATGCTTTTTATCAGACAGAATCAAGCTTGAATTACCATTACGAGGGTTGTACTGCGACTGTGCTTCTTGTTTGGACTGATAGTGATGACAATTTCTTTGCACAATGTGCAAATCTTGGGGATTCAGCTTGTGTTATAAATGTCAATGGGAAACAAATGAAGATGACGGAGGACCATAGAATTAGTAGTTATACTGAAAGACTCAGGATCCAGCAAACTGGAGAGCCATTGAAAGAGGGGGAAACACGTCTATGTGGTTTGAATCTTGCTCGAATGCTTGGAGACAAGTTTCTTAAACAGCAGGATTCCCGCTTTAGCTCAGATCCCTATATCAGCCAAGTGGTACATATTGATCAAGCGAGCAAAGCATTTGCGATTATGGCCAGTGATGGCTTTTGGGATGTCATTAGTGCAAAAAAGGCGGTTCAGCAAGTTCTGCAGATGAGAGAGAAATACTCAACGGATGGGGAGAATTTGGCAGAGAAGACTGCAAATATGTTATTGAGTGAGGCTAGAACAGTGCGAACAAAGGATAATACCTCTATTATTTTCTTAGATTTTGACAGTTCTAGAGTCTCATGTAAAGGTGGATCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004721 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019538 GO:0036211 GO:0042578 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050408 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FHA PP2C

Protein Analysis

568

Amino Acids

62.7

Weight (kDa)

5.54

Isoelectric Point (pI)

45.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Yop-YscD_cpl	PF16697	167 - 273	3.7e-07	Inner membrane component of T3SS, cytoplasmic domain
FHA	PF00498	190 - 265	2.2e-13	FHA domain
PP2C	PF00481	296 - 549	2.5e-45	Protein phosphatase 2C
PP2C_2	PF13672	322 - 513	1.2e-07	Protein phosphatase 2C

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010403)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19280 AT5G19280
fragaria_vesca	FvH4_4g14950 FvH4_4g14950
malus_domestica	MD13G1186700.v1.1 MD16G1187600.v1.1
prunus_persica	Prupe.1G154400_v2.0.a1 Prupe.1G154400_v2.0.a1 Prupe.1G154400_v2.0.a1
pyrus_communis	pycom13g16160 pycom16g15740
rosa_chinensis	RchiOBHm_Chr4g0417151
rosa_laevigata	RLG00000007927
rosa_multiflora	Rmu_sc0000646.1_g000022
rosa_roxburghii	Rroxscaffold_5G00360970
rosa_rugosa	Rorug04G0146200
rosa_samantha	Rh4AG209000 Rh4BG205900 Rh4CG220000 Rh4DG206700
rosa_wichuraiana	Rw4G017700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	264, 1247
AccI	GTMKAC	1 cut(s)	742
AccIII	TCCGGA	1 cut(s)	171
AciI	CCGC	4 cut(s)	161, 990, 1420, 1532
AclWI	GGATC	9 cut(s)	46, 171, 458, 471, 480, 866, 1312, 1325, 1427
AcoI	YGGCCR	2 cut(s)	358, 1491
AcsI	RAATTY	4 cut(s)	424, 646, 706, 1582
AcuI	CTGAAG	2 cut(s)	852, 1080
AdeI	CACNNNGTG	1 cut(s)	1217
AfaI	GTAC	3 cut(s)	537, 1162, 1455
AfiI	CCNNNNNNNGG	6 cut(s)	151, 493, 518, 734, 944, 1153
AflIII	ACRYGT	1 cut(s)	1355
AgsI	TTSAA	6 cut(s)	227, 297, 651, 1141, 1342, 1372
AjiI	CACGTC	1 cut(s)	1358
AjnI	CCWGG	1 cut(s)	492
AjuI	GAANNNNNNNTTGG	2 cut(s)	653, 685
AluBI	AGCT	9 cut(s)	287, 312, 506, 766, 904, 1021, 1137, 1238, 1428
AluI	AGCT	9 cut(s)	287, 312, 506, 766, 904, 1021, 1137, 1238, 1428
Alw26I	GTCTC	3 cut(s)	622, 1386, 1690
AlwI	GGATC	9 cut(s)	46, 171, 458, 471, 480, 866, 1312, 1325, 1427
AlwNI	CAGNNNCTG	1 cut(s)	1001
Aor13HI	TCCGGA	1 cut(s)	171
AoxI	GGCC	3 cut(s)	358, 935, 1491
ApeKI	GCWGC	4 cut(s)	43, 1001, 1021, 1024
ApoI	RAATTY	4 cut(s)	424, 646, 706, 1582
ArsI	GACNNNNNNTTYG	4 cut(s)	823, 855, 1190, 1222
AseI	ATTAAT	1 cut(s)	720
AspLEI	GCGC	2 cut(s)	90, 246
AspS9I	GGNCC	4 cut(s)	169, 316, 509, 1282
AsuHPI	GGTGA	2 cut(s)	140, 764
AsuNHI	GCTAGC	1 cut(s)	1013
AvaII	GGWCC	4 cut(s)	169, 316, 509, 1282
BaeGI	GKGCMC	1 cut(s)	459
BalI	TGGCCA	2 cut(s)	360, 1493
BamHI	GGATCC	2 cut(s)	463, 1317
BbsI	GAAGAC	3 cut(s)	58, 351, 1601
BbvI	GCAGC	4 cut(s)	30, 988, 1008, 1011
BccI	CCATC	6 cut(s)	149, 396, 938, 1027, 1493, 1568
BciT130I	CCWGG	1 cut(s)	494
BclI	TGATCA	2 cut(s)	952, 1462
BcoDI	GTCTC	3 cut(s)	622, 1386, 1690
BfaI	CTAG	8 cut(s)	11, 209, 320, 555, 771, 1014, 1623, 1680
BfmI	CTRYAG	1 cut(s)	1547
BfoI	RGCGCY	1 cut(s)	91
BisI	GCNGC	4 cut(s)	44, 1002, 1022, 1025
BlsI	GCNGC	4 cut(s)	45, 1003, 1023, 1026
Bme1390I	CCNGG	1 cut(s)	494
Bme18I	GGWCC	4 cut(s)	169, 316, 509, 1282
BmgBI	CACGTC	1 cut(s)	1358
BmgT120I	GGNCC	4 cut(s)	169, 316, 509, 1282
BmiI	GGNNCC	6 cut(s)	176, 465, 582, 796, 846, 1319
BmrFI	CCNGG	1 cut(s)	494
BmsI	GCATC	4 cut(s)	325, 641, 1081, 1102
BmtI	GCTAGC	1 cut(s)	1017
BpiI	GAAGAC	3 cut(s)	58, 351, 1601
BplI	GAGNNNNNCTC	2 cut(s)	1550, 1582
BpmI	CTGGAG	2 cut(s)	515, 1350
BpuEI	CTTGAG	1 cut(s)	353
Bsa29I	ATCGAT	1 cut(s)	635
BsaBI	GATNNNNATC	1 cut(s)	56
BsaI	GGTCTC	1 cut(s)	622
BsaJI	CCNNGG	6 cut(s)	83, 178, 459, 468, 517, 876
BsaWI	WCCGGW	1 cut(s)	171
BsaXI	ACNNNNNCTCC	4 cut(s)	271, 301, 846, 876
Bsc4I	CCNNNNNNNGG	6 cut(s)	151, 493, 518, 734, 944, 1153
Bse1I	ACTGG	3 cut(s)	647, 1333, 1494
Bse3DI	GCAATG	1 cut(s)	1091
Bse8I	GATNNNNATC	1 cut(s)	56
BseAI	TCCGGA	1 cut(s)	171
BseBI	CCWGG	1 cut(s)	494
BseCI	ATCGAT	1 cut(s)	635
BseDI	CCNNGG	6 cut(s)	83, 178, 459, 468, 517, 876
BseGI	GGATG	4 cut(s)	160, 1117, 1516, 1579
BseJI	GATNNNNATC	1 cut(s)	56
BseLI	CCNNNNNNNGG	6 cut(s)	151, 493, 518, 734, 944, 1153
BseMI	GCAATG	1 cut(s)	1091
BseMII	CTCAG	4 cut(s)	633, 825, 1327, 1443
BseNI	ACTGG	3 cut(s)	647, 1333, 1494
BseRI	GAGGAG	1 cut(s)	88
BseSI	GKGCMC	1 cut(s)	459
BseXI	GCAGC	4 cut(s)	30, 988, 1008, 1011
BshFI	GGCC	3 cut(s)	360, 937, 1493
BshVI	ATCGAT	1 cut(s)	635
BsiSI	CCGG	1 cut(s)	172
BslI	CCNNNNNNNGG	6 cut(s)	151, 493, 518, 734, 944, 1153
BsmAI	GTCTC	3 cut(s)	622, 1386, 1690
BsmI	GAATGC	1 cut(s)	1389
BsnI	GGCC	3 cut(s)	360, 937, 1493
Bso31I	GGTCTC	1 cut(s)	622
Bsp1286I	GDGCHC	1 cut(s)	459
Bsp13I	TCCGGA	1 cut(s)	171
Bsp19I	CCATGG	3 cut(s)	83, 517, 876
BspACI	CCGC	4 cut(s)	161, 990, 1420, 1532
BspANI	GGCC	3 cut(s)	360, 937, 1493
BspCNI	CTCAG	4 cut(s)	632, 826, 1326, 1442
BspDI	ATCGAT	1 cut(s)	635
BspEI	TCCGGA	1 cut(s)	171
BspLI	GGNNCC	6 cut(s)	176, 465, 582, 796, 846, 1319
BspMAI	CTGCAG	1 cut(s)	1551
BspOI	GCTAGC	1 cut(s)	1017
BspPI	GGATC	9 cut(s)	46, 171, 458, 471, 480, 866, 1312, 1325, 1427
BspTNI	GGTCTC	1 cut(s)	622
BsrDI	GCAATG	1 cut(s)	1091
BsrI	ACTGG	3 cut(s)	647, 1333, 1494
BssECI	CCNNGG	6 cut(s)	83, 178, 459, 468, 517, 876
BssT1I	CCWWGG	6 cut(s)	83, 178, 459, 468, 517, 876
Bst2UI	CCWGG	1 cut(s)	494
Bst4CI	ACNGT	6 cut(s)	450, 540, 747, 1171, 1630, 1676
Bst6I	CTCTTC	1 cut(s)	106
BstAPI	GCANNNNNTGC	3 cut(s)	1001, 1217, 1546
BstC8I	GCNNGC	5 cut(s)	630, 768, 1015, 1019, 1471
BstDEI	CTNAG	6 cut(s)	619, 834, 1106, 1313, 1429, 1663
BstDSI	CCRYGG	3 cut(s)	83, 517, 876
BstEII	GGTNACC	1 cut(s)	752
BstENI	CCTNNNNNAGG	1 cut(s)	732
BstF5I	GGATG	4 cut(s)	160, 1117, 1516, 1579
BstH2I	RGCGCY	1 cut(s)	91
BstHHI	GCGC	2 cut(s)	90, 246
BstMAI	GTCTC	3 cut(s)	622, 1386, 1690
BstMWI	GCNNNNNNNGC	7 cut(s)	1001, 1010, 1217, 1475, 1490, 1529, 1546
BstNI	CCWGG	1 cut(s)	494
BstNSI	RCATGY	3 cut(s)	222, 486, 632
BstPI	GGTNACC	1 cut(s)	752
BstSCI	CCNGG	1 cut(s)	492
BstSFI	CTRYAG	1 cut(s)	1547
BstSLI	GKGCMC	1 cut(s)	459
BstV1I	GCAGC	4 cut(s)	30, 988, 1008, 1011
BstV2I	GAAGAC	3 cut(s)	58, 351, 1601
BstX2I	RGATCY	5 cut(s)	163, 463, 871, 1317, 1432
BstXI	CCANNNNNNTGG	1 cut(s)	1328
BstYI	RGATCY	5 cut(s)	163, 463, 871, 1317, 1432
Bsu15I	ATCGAT	1 cut(s)	635
BsuRI	GGCC	3 cut(s)	360, 937, 1493
BsuTUI	ATCGAT	1 cut(s)	635
BtgI	CCRYGG	3 cut(s)	83, 517, 876
BtrI	CACGTC	1 cut(s)	1358
BtsCI	GGATG	4 cut(s)	160, 1117, 1516, 1579
BtsIMutI	CAGTG	3 cut(s)	752, 1501, 1635
Cac8I	GCNNGC	5 cut(s)	630, 768, 1015, 1019, 1471
CaiI	CAGNNNCTG	1 cut(s)	1001
CfoI	GCGC	2 cut(s)	90, 246
Cfr13I	GGNCC	4 cut(s)	169, 316, 509, 1282
ClaI	ATCGAT	1 cut(s)	635
CseI	GACGC	2 cut(s)	362, 875
Csp6I	GTAC	3 cut(s)	536, 1161, 1454
CviAII	CATG	9 cut(s)	84, 219, 483, 518, 629, 679, 877, 986, 1689
CviQI	GTAC	3 cut(s)	536, 1161, 1454
DdeI	CTNAG	6 cut(s)	619, 834, 1106, 1313, 1429, 1663
DraIII	CACNNNGTG	1 cut(s)	1217
EaeI	YGGCCR	2 cut(s)	358, 1491
Eam1104I	CTCTTC	1 cut(s)	106
EarI	CTCTTC	1 cut(s)	106
EciI	GGCGGA	1 cut(s)	1005
Eco130I	CCWWGG	6 cut(s)	83, 178, 459, 468, 517, 876
Eco31I	GGTCTC	1 cut(s)	622
Eco47I	GGWCC	4 cut(s)	169, 316, 509, 1282
Eco57I	CTGAAG	2 cut(s)	852, 1080
Eco91I	GGTNACC	1 cut(s)	752
EcoNI	CCTNNNNNAGG	1 cut(s)	732
EcoO65I	GGTNACC	1 cut(s)	752
EcoRI	GAATTC	1 cut(s)	646
EcoRII	CCWGG	1 cut(s)	492
EcoT14I	CCWWGG	6 cut(s)	83, 178, 459, 468, 517, 876
EcoT22I	ATGCAT	1 cut(s)	634
ErhI	CCWWGG	6 cut(s)	83, 178, 459, 468, 517, 876
FaeI	CATG	9 cut(s)	87, 222, 486, 521, 632, 682, 880, 989, 1692
FalI	AAGNNNNNCTT	2 cut(s)	452, 484
FatI	CATG	9 cut(s)	83, 218, 482, 517, 628, 678, 876, 985, 1688
FauI	CCCGC	1 cut(s)	1427
FbaI	TGATCA	2 cut(s)	952, 1462
FblI	GTMKAC	1 cut(s)	742
Fnu4HI	GCNGC	4 cut(s)	44, 1002, 1022, 1025
FokI	GGATG	4 cut(s)	167, 1124, 1523, 1586
Fsp4HI	GCNGC	4 cut(s)	44, 1002, 1022, 1025
FspBI	CTAG	8 cut(s)	11, 209, 320, 555, 771, 1014, 1623, 1680
GlaI	GCGC	2 cut(s)	89, 245
GluI	GCNGC	4 cut(s)	44, 1002, 1022, 1025
GsuI	CTGGAG	2 cut(s)	515, 1350
HaeII	RGCGCY	1 cut(s)	91
HaeIII	GGCC	3 cut(s)	360, 937, 1493
HapII	CCGG	1 cut(s)	172
HgaI	GACGC	2 cut(s)	362, 875
HhaI	GCGC	2 cut(s)	90, 246
Hin1II	CATG	9 cut(s)	87, 222, 486, 521, 632, 682, 880, 989, 1692
Hin6I	GCGC	2 cut(s)	88, 244
HinP1I	GCGC	2 cut(s)	88, 244
HincII	GTYRAC	1 cut(s)	543
HindII	GTYRAC	1 cut(s)	543
HindIII	AAGCTT	2 cut(s)	902, 1135
HpaII	CCGG	1 cut(s)	172
HphI	GGTGA	2 cut(s)	140, 764
Hpy166II	GTNNAC	5 cut(s)	80, 131, 543, 676, 743
Hpy8I	GTNNAC	5 cut(s)	80, 131, 543, 676, 743
Hpy99I	CGWCG	1 cut(s)	891
HpyAV	CCTTC	4 cut(s)	227, 522, 570, 618
HpyCH4III	ACNGT	6 cut(s)	450, 540, 747, 1171, 1630, 1676
HpyCH4IV	ACGT	1 cut(s)	1357
HpyCH4V	TGCA	8 cut(s)	445, 632, 1084, 1211, 1220, 1523, 1549, 1601
HpyF10VI	GCNNNNNNNGC	7 cut(s)	1001, 1010, 1217, 1475, 1490, 1529, 1546
HpyF3I	CTNAG	6 cut(s)	619, 834, 1106, 1313, 1429, 1663
HpySE526I	ACGT	1 cut(s)	1357
Hsp92II	CATG	9 cut(s)	87, 222, 486, 521, 632, 682, 880, 989, 1692
HspAI	GCGC	2 cut(s)	88, 244
Kpn2I	TCCGGA	1 cut(s)	171
Ksp22I	TGATCA	2 cut(s)	952, 1462
LmnI	GCTCC	4 cut(s)	215, 292, 763, 992
Lsp1109I	GCAGC	4 cut(s)	30, 988, 1008, 1011
LweI	GCATC	4 cut(s)	325, 641, 1081, 1102
MaeI	CTAG	8 cut(s)	11, 209, 320, 555, 771, 1014, 1623, 1680
MaeII	ACGT	1 cut(s)	1357
MaeIII	GTNAC	3 cut(s)	200, 752, 977
MboII	GAAGA	9 cut(s)	23, 58, 85, 93, 356, 413, 926, 1282, 1606
MflI	RGATCY	5 cut(s)	163, 463, 871, 1317, 1432
MhlI	GDGCHC	1 cut(s)	459
MlsI	TGGCCA	2 cut(s)	360, 1493
MluCI	AATT	9 cut(s)	292, 424, 646, 706, 717, 1141, 1201, 1290, 1582
MluNI	TGGCCA	2 cut(s)	360, 1493
MlyI	GAGTC	4 cut(s)	562, 847, 1305, 1692
MmeI	TCCRAC	1 cut(s)	302
Mox20I	TGGCCA	2 cut(s)	360, 1493
Mph1103I	ATGCAT	1 cut(s)	634
MroI	TCCGGA	1 cut(s)	171
MscI	TGGCCA	2 cut(s)	360, 1493
MseI	TTAA	4 cut(s)	602, 690, 720, 1404
MslI	CAYNNNNRTG	1 cut(s)	1360
Msp20I	TGGCCA	2 cut(s)	360, 1493
MspI	CCGG	1 cut(s)	172
MspR9I	CCNGG	1 cut(s)	494
Mva1269I	GAATGC	1 cut(s)	1389
MvaI	CCWGG	1 cut(s)	494
MwoI	GCNNNNNNNGC	7 cut(s)	1001, 1010, 1217, 1475, 1490, 1529, 1546
NcoI	CCATGG	3 cut(s)	83, 517, 876
NheI	GCTAGC	1 cut(s)	1013
NlaIII	CATG	9 cut(s)	87, 222, 486, 521, 632, 682, 880, 989, 1692
NlaIV	GGNNCC	6 cut(s)	176, 465, 582, 796, 846, 1319
NmuCI	GTSAC	2 cut(s)	752, 977
NsiI	ATGCAT	1 cut(s)	634
NspI	RCATGY	3 cut(s)	222, 486, 632
PaeI	GCATGC	1 cut(s)	632
PctI	GAATGC	1 cut(s)	1389
PfeI	GAWTC	8 cut(s)	7, 608, 731, 1055, 1130, 1232, 1372, 1415
PkrI	GCNGC	4 cut(s)	45, 1003, 1023, 1026
PleI	GAGTC	4 cut(s)	562, 846, 1305, 1691
PpsI	GAGTC	4 cut(s)	562, 846, 1305, 1691
PshBI	ATTAAT	1 cut(s)	720
PsiI	TTATAA	2 cut(s)	264, 1247
Psp6I	CCWGG	1 cut(s)	492
PspEI	GGTNACC	1 cut(s)	752
PspGI	CCWGG	1 cut(s)	492
PspN4I	GGNNCC	6 cut(s)	176, 465, 582, 796, 846, 1319
PspPI	GGNCC	4 cut(s)	169, 316, 509, 1282
PstI	CTGCAG	1 cut(s)	1551
PstNI	CAGNNNCTG	1 cut(s)	1001
PsuI	RGATCY	5 cut(s)	163, 463, 871, 1317, 1432
RsaI	GTAC	3 cut(s)	537, 1162, 1455
RsaNI	GTAC	3 cut(s)	536, 1161, 1454
RseI	CAYNNNNRTG	1 cut(s)	1360
SaqAI	TTAA	4 cut(s)	602, 690, 720, 1404
SatI	GCNGC	4 cut(s)	44, 1002, 1022, 1025
Sau96I	GGNCC	4 cut(s)	169, 316, 509, 1282
SchI	GAGTC	4 cut(s)	562, 847, 1305, 1692
ScrFI	CCNGG	1 cut(s)	494
SduI	GDGCHC	1 cut(s)	459
SfaNI	GCATC	4 cut(s)	325, 641, 1081, 1102
SfcI	CTRYAG	1 cut(s)	1547
SinI	GGWCC	4 cut(s)	169, 316, 509, 1282
SmiMI	CAYNNNNRTG	1 cut(s)	1360
SmlI	CTYRAG	1 cut(s)	368
SmoI	CTYRAG	1 cut(s)	368
SphI	GCATGC	1 cut(s)	632
Sse9I	AATT	9 cut(s)	292, 424, 646, 706, 717, 1141, 1201, 1290, 1582
SsiI	CCGC	4 cut(s)	161, 990, 1420, 1532
SspMI	CTAG	8 cut(s)	11, 209, 320, 555, 771, 1014, 1623, 1680
StyD4I	CCNGG	1 cut(s)	492
StyI	CCWWGG	6 cut(s)	83, 178, 459, 468, 517, 876
TaaI	ACNGT	6 cut(s)	450, 540, 747, 1171, 1630, 1676
TaiI	ACGT	1 cut(s)	1360
TaqI	TCGA	2 cut(s)	635, 1381
TasI	AATT	9 cut(s)	292, 424, 646, 706, 717, 1141, 1201, 1290, 1582
TatI	WGTACW	1 cut(s)	1160
TfiI	GAWTC	8 cut(s)	7, 608, 731, 1055, 1130, 1232, 1372, 1415
Tru1I	TTAA	4 cut(s)	602, 690, 720, 1404
Tru9I	TTAA	4 cut(s)	602, 690, 720, 1404
TscAI	CASTG	3 cut(s)	752, 1501, 1635
TseFI	GTSAC	2 cut(s)	752, 977
TseI	GCWGC	4 cut(s)	43, 1001, 1021, 1024
Tsp45I	GTSAC	2 cut(s)	752, 977
TspDTI	ATGAA	6 cut(s)	201, 246, 674, 806, 813, 1283
TspGWI	ACGGA	3 cut(s)	996, 1292, 1586
TspRI	CASTG	3 cut(s)	752, 1501, 1635
VpaK11BI	GGWCC	4 cut(s)	169, 316, 509, 1282
VspI	ATTAAT	1 cut(s)	720
XagI	CCTNNNNNAGG	1 cut(s)	732
XapI	RAATTY	4 cut(s)	424, 646, 706, 1582
XbaI	TCTAGA	3 cut(s)	10, 208, 1679
XceI	RCATGY	3 cut(s)	222, 486, 632
XcmI	CCANNNNNNNNNTGG	1 cut(s)	466
XmiI	GTMKAC	1 cut(s)	742
XspI	CTAG	8 cut(s)	11, 209, 320, 555, 771, 1014, 1623, 1680
Zsp2I	ATGCAT	1 cut(s)	634

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.