Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0017141

Physical Location & Seq

Genomic Coordinates Reverse (-)

20267477 .. 20270791

Gene Structure 3315 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g16280.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2211 bp

ATGTCAACGCTACCCTGCACCACTCTATCCCTCCCTCACCCCCCAAACCCAAACCCAAACACACCCCGAACCCCAACAAACCTAAACACCACACCCACAACCCTCTTCAAATCCCTCTCCTCCTCCACCAACCTCACCCACCTCAAACAACTCCACGCCCAAATCCTCAAAACCAACCCCGACCGCTCCCACTTTCTCCTCTCCAAACTCCTCCTCTCCTCCTTCCCTCTCTCCCCTTCTCTCCACTACCCCCTCTCCCTCTTCCACCAAATCCCCAAACCCCAAACCCACCTCTGCAACAAGCTTCTCCGTGAGCTTTCGCGCTGCCGCGAGCCCGAAAAGGCCCTCTTGGTCTATGAGACCATGCGGAGGGAGGGTGTCGCTCTCGACCGGTTCAGCTTCCCGCCATTGTTGAAGGCCGTGTCGAGAGCTGTGGTTCTGGCTGAGGGTTTGGAGATTCATGGGCTTGCTTGCAAGTTGGGCTATGATTCCGACCCGTTTGTGCAGACGGTTTTGGTCAGAATGTATGCTGCTTGTGGGAGGGTTATGGATGCACGCCAAGTGTTTGATAAAATGCCTAGCCGGGATGTTGTTGCCTGGAGTATTATGATTGATGGATACTGTCAGAGTGGGCATTATGATATTGCATTCCACCTCTTTGAGGAGATGAAGAATACGGATGTGAAGCCTGATCAGATGATTCTTTCGGCAATGCTTTCTGCCTGCGGACGTGCTGGGAAGTTGAGTTATGGGAAGGCAATCCATGACTTCATTGAGGATAATAATATTGTGGTTGACTCTCATATACTGAGTGCTCTTATCGCCGTGTATGCCGGTAGTGGTTCTATGGATTTGGCTCAGAAATTGTTTGACAAGACGTCAGTGAGAAATTTCGTAGTGGCAACTGCCATGGTCTCTGGGTATTCAAAAGTGGGACGGGTTGAAGATGCACGCAAGATTTTTGACCAAATTGTTCAGAAGGACTTGGTCTGTTGGAGTGCTATGATATCTGGTTATGCTGAAAGTGATCAACCTCGAGAGGCACTTAGATTGTTTTCTGAAATGGAAGTTTCGGGATTAAGACCTGACCCAGTCACCATGTTGAGTGTCATTTCAGCCTGTTCTCATCTTGGTGCACTGGATCAAGCTAAATGGGTTCATTCATATGTTGATACGAATGGATTCAGTGGAGCTTTGTCTATCAACAATGCCCTCATTGATATGTATGCGAAATGTGGAAGCTTGGAAAGAGCAAGACAAGTATTTGAGAAAATGCCAAGAAGAAATGTGATATCTTGGACCACTATGATTAGTGCCTTTGCCATGCATGGGGATGCCAGTAACGCACTCAGTTTCTTCAGTCAAATGAAACTTGCCAATGTAGAGCCCAACGCTGTTACATTTGTGGGAGTGCTTTATGCTTGTAGTCATGCGGGGTTCGTTGAGGAGGGTCGACAGATTTTTGCATCAATGGTGAATGAGTACAATATCACTCCTAAACTCAAGCACTATGGTTGCATGGTTGACCTCTATGGCCGTGCAAATCTCTTAAGAGAAGCTCTTGAGGTTATTGAGACAATGCCCCTGGCACCAAATGTTGTCATTTGGGGATCTTTAATGGCAGCCTGTCAGATTCATGGTGAGATTGAATTAGGAGAATTTGCTGCAAAACAGGTTCTTGAGCTGGAACCAGACCATGATGGAGCCCTTGTATTCTTATCCAACATTTATGCAAAAGAAAGAAGATGGGAGGATGTTGTTATGGTGAGAAAAATAATGAAAAATAGAGGCATCTCAAAGCGGAGGGGATGCAGCAGGATAGAACTACAGAATGAGGTACATGAGTTTTTAATGGCAGATAGAAGTCATAAACAAGCAGATCAGATCTATGAGAAGTTGAATGAGGTAGTTAGTGAGGTGAAGCGAGTTGGCTATACTCCCAATACATGTAACGTTTTGGTTGATATAGAAGAAGAGGAAAAGAAGGAAGCAATTCTCTGGCACAGTGAGAAGTTGGCTGTTTCTTTTGGTTTGCTTAGTGCCAAAAAAGGTTCTTGCATTCGCATGGTTAAGAATCTCAGGATTTGTGAAGATTGCCATAATTTCATGAAGTTGGCTTCAAAGGTGTATGATAGAGAGATTATTATCAGAGATAGGACTAGGTTTCACCATTACAAACATGGTTACTGTTCTTGTAAAGACTACTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR

Protein Analysis

737

Amino Acids

82.89

Weight (kDa)

8.13

Isoelectric Point (pI)

45.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_long	PF17177	103 - 247	1.6e-06	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	195 - 242	6.7e-12	PPR repeat family
PPR_1	PF12854	195 - 224	1.2e-08	PPR repeat
PPR	PF01535	198 - 225	1.3e-07	PPR repeat
PPR_2	PF13041	328 - 375	1.9e-10	PPR repeat family
PPR	PF01535	330 - 360	2.6e-07	PPR repeat
PPR_2	PF13041	428 - 476	3.7e-10	PPR repeat family
PPR_long	PF17177	442 - 527	3.2e-06	Pentacotripeptide-repeat region of PRORP
E_motif	PF20431	546 - 608	1.5e-20	E motif
DYW_deaminase	PF14432	644 - 736	7.6e-39	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017141)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G14820
fragaria_vesca	FvH4_4g16280
malus_domestica	MD16G1195600.v1.1
prunus_persica	Prupe.1G015600_v2.0.a1
pyrus_communis	pycom16g16480
rosa_chinensis	RchiOBHm_Chr4g0415871
rosa_laevigata	RLG00000008032
rosa_multiflora	Rmu_co8517385.1_g000001 Rmu_sc0002438.1_g000005
rosa_rugosa	Rorug04G0137100
rosa_samantha	Rh4BG196800 Rh4CG209900
rosa_wichuraiana	Rw4G016860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	881
AccB1I	GGYRCC	1 cut(s)	1588
AccBSI	CCGCTC	1 cut(s)	186
AccI	GTMKAC	1 cut(s)	1453
AccII	CGCG	2 cut(s)	322, 330
AciI	CCGC	7 cut(s)	184, 328, 367, 404, 726, 1433, 1801
AclI	AACGTT	1 cut(s)	1953
AclWI	GGATC	2 cut(s)	1149, 1618
AcoI	YGGCCR	1 cut(s)	1534
AcsI	RAATTY	2 cut(s)	889, 1658
AcuI	CTGAAG	1 cut(s)	1342
AcyI	GRCGYC	1 cut(s)	878
AfaI	GTAC	2 cut(s)	1484, 1839
AfiI	CCNNNNNNNGG	3 cut(s)	369, 661, 1329
AflII	CTTAAG	1 cut(s)	1549
AflIII	ACRYGT	1 cut(s)	1946
AgeI	ACCGGT	1 cut(s)	390
AgsI	TTSAA	7 cut(s)	109, 415, 927, 944, 1649, 1900, 2121
AhdI	GACNNNNNGTC	1 cut(s)	877
AjiI	CACGTC	1 cut(s)	731
AjnI	CCWGG	2 cut(s)	596, 1584
AluBI	AGCT	9 cut(s)	304, 316, 399, 431, 1148, 1193, 1242, 1559, 1684
AluI	AGCT	9 cut(s)	304, 316, 399, 431, 1148, 1193, 1242, 1559, 1684
Alw21I	GWGCWC	2 cut(s)	817, 1138
Alw26I	GTCTC	3 cut(s)	353, 919, 1568
Alw44I	GTGCAC	1 cut(s)	1134
AlwI	GGATC	2 cut(s)	1149, 1618
Ama87I	CYCGRG	1 cut(s)	1035
AoxI	GGCC	3 cut(s)	342, 417, 1534
ApaLI	GTGCAC	1 cut(s)	1134
ApeKI	GCWGC	5 cut(s)	324, 530, 1622, 1664, 1812
ApoI	RAATTY	2 cut(s)	889, 1658
AsiGI	ACCGGT	1 cut(s)	390
Asp700I	GAANNNNTTC	2 cut(s)	1181, 1992
AspLEI	GCGC	1 cut(s)	324
AspS9I	GGNCC	2 cut(s)	343, 1299
AsuC2I	CCSGG	1 cut(s)	584
AsuHPI	GGTGA	8 cut(s)	29, 127, 1087, 1486, 1652, 1777, 1930, 2159
AvaI	CYCGRG	1 cut(s)	1035
AvaII	GGWCC	1 cut(s)	1299
BaeGI	GKGCMC	1 cut(s)	1138
BaeI	ACNNNNGTAYC	2 cut(s)	1829, 1862
BanI	GGYRCC	1 cut(s)	1588
BanII	GRGCYC	3 cut(s)	336, 1389, 1708
Bbv12I	GWGCWC	2 cut(s)	817, 1138
BbvCI	CCTCAGC	1 cut(s)	444
BbvI	GCAGC	5 cut(s)	311, 517, 1634, 1651, 1824
BccI	CCATC	3 cut(s)	608, 1694, 1740
BceAI	ACGGC	3 cut(s)	404, 809, 1521
BciT130I	CCWGG	2 cut(s)	598, 1586
BciVI	GTATCC	1 cut(s)	611
BclI	TGATCA	2 cut(s)	691, 1027
BcnI	CCSGG	1 cut(s)	584
BcoDI	GTCTC	3 cut(s)	353, 919, 1568
BfaI	CTAG	2 cut(s)	579, 2160
BfmI	CTRYAG	1 cut(s)	1826
BfrI	CTTAAG	1 cut(s)	1549
BfuI	GTATCC	1 cut(s)	611
BglII	AGATCT	1 cut(s)	1884
BisI	GCNGC	6 cut(s)	325, 328, 531, 1623, 1665, 1813
BlsI	GCNGC	6 cut(s)	326, 329, 532, 1624, 1666, 1814
Bme1390I	CCNGG	3 cut(s)	584, 598, 1586
Bme18I	GGWCC	1 cut(s)	1299
BmeRI	GACNNNNNGTC	1 cut(s)	877
BmeT110I	CYCGRG	1 cut(s)	1035
BmgBI	CACGTC	1 cut(s)	731
BmgT120I	GGNCC	2 cut(s)	343, 1299
BmiI	GGNNCC	3 cut(s)	1590, 1689, 1705
BmrFI	CCNGG	3 cut(s)	584, 598, 1586
BmrI	ACTGGG	1 cut(s)	1085
BmsI	GCATC	6 cut(s)	541, 937, 1324, 1475, 1799, 1800
BmuI	ACTGGG	1 cut(s)	1085
BpmI	CTGGAG	1 cut(s)	619
Bpu10I	CCTNAGC	1 cut(s)	444
BpuEI	CTTGAG	3 cut(s)	1487, 1583, 1700
BpuMI	CCSGG	1 cut(s)	584
BsaBI	GATNNNNATC	1 cut(s)	2144
BsaHI	GRCGYC	1 cut(s)	878
BsaI	GGTCTC	2 cut(s)	353, 919
BsaJI	CCNNGG	2 cut(s)	909, 1584
BsaWI	WCCGGW	1 cut(s)	390
BsaXI	ACNNNNNCTCC	6 cut(s)	239, 269, 361, 391, 1695, 1725
Bsc4I	CCNNNNNNNGG	3 cut(s)	369, 661, 1329
Bse118I	RCCGGY	2 cut(s)	390, 833
Bse1I	ACTGG	4 cut(s)	1091, 1143, 1338, 2210
Bse3DI	GCAATG	1 cut(s)	717
Bse8I	GATNNNNATC	1 cut(s)	2144
BseBI	CCWGG	2 cut(s)	598, 1586
BseDI	CCNNGG	2 cut(s)	909, 1584
BseGI	GGATG	6 cut(s)	556, 592, 685, 1339, 1759, 1814
BseJI	GATNNNNATC	1 cut(s)	2144
BseLI	CCNNNNNNNGG	3 cut(s)	369, 661, 1329
BseMI	GCAATG	1 cut(s)	717
BseMII	CTCAG	5 cut(s)	435, 800, 872, 1363, 2092
BseNI	ACTGG	4 cut(s)	1091, 1143, 1338, 2210
BseRI	GAGGAG	8 cut(s)	109, 112, 188, 200, 203, 208, 677, 1460
BseSI	GKGCMC	1 cut(s)	1138
BseXI	GCAGC	5 cut(s)	311, 517, 1634, 1651, 1824
BseYI	CCCAGC	1 cut(s)	734
BsgI	GTGCAG	1 cut(s)	524
Bsh1236I	CGCG	2 cut(s)	322, 330
Bsh1285I	CGRYCG	2 cut(s)	184, 391
BshFI	GGCC	3 cut(s)	344, 419, 1536
BshNI	GGYRCC	1 cut(s)	1588
BshTI	ACCGGT	1 cut(s)	390
BsiEI	CGRYCG	2 cut(s)	184, 391
BsiHKAI	GWGCWC	2 cut(s)	817, 1138
BsiHKCI	CYCGRG	1 cut(s)	1035
BsiSI	CCGG	3 cut(s)	391, 583, 834
BslFI	GGGAC	1 cut(s)	948
BslI	CCNNNNNNNGG	3 cut(s)	369, 661, 1329
BsmAI	GTCTC	3 cut(s)	353, 919, 1568
BsmFI	GGGAC	1 cut(s)	948
BsmI	GAATGC	2 cut(s)	647, 2058
BsnI	GGCC	3 cut(s)	344, 419, 1536
Bso31I	GGTCTC	2 cut(s)	353, 919
BsoBI	CYCGRG	1 cut(s)	1035
Bsp1286I	GDGCHC	5 cut(s)	336, 817, 1138, 1389, 1708
Bsp143I	GATC	6 cut(s)	691, 1027, 1141, 1610, 1879, 1884
Bsp19I	CCATGG	1 cut(s)	909
BspACI	CCGC	7 cut(s)	184, 328, 367, 404, 726, 1433, 1801
BspANI	GGCC	3 cut(s)	344, 419, 1536
BspCNI	CTCAG	5 cut(s)	436, 801, 871, 1362, 2091
BspFNI	CGCG	2 cut(s)	322, 330
BspHI	TCATGA	1 cut(s)	2106
BspLI	GGNNCC	3 cut(s)	1590, 1689, 1705
BspPI	GGATC	2 cut(s)	1149, 1618
BspT107I	GGYRCC	1 cut(s)	1588
BspTI	CTTAAG	1 cut(s)	1549
BspTNI	GGTCTC	2 cut(s)	353, 919
BsrBI	CCGCTC	1 cut(s)	186
BsrDI	GCAATG	1 cut(s)	717
BsrFI	RCCGGY	2 cut(s)	390, 833
BsrI	ACTGG	4 cut(s)	1091, 1143, 1338, 2210
BssAI	RCCGGY	2 cut(s)	390, 833
BssECI	CCNNGG	2 cut(s)	909, 1584
BssMI	GATC	6 cut(s)	691, 1027, 1141, 1610, 1879, 1884
BssNI	GRCGYC	1 cut(s)	878
BssT1I	CCWWGG	1 cut(s)	909
Bst2UI	CCWGG	2 cut(s)	598, 1586
Bst4CI	ACNGT	4 cut(s)	511, 623, 2006, 2189
Bst6I	CTCTTC	3 cut(s)	110, 266, 1968
BstACI	GRCGYC	1 cut(s)	878
BstAFI	CTTAAG	1 cut(s)	1549
BstC8I	GCNNGC	6 cut(s)	332, 468, 472, 556, 724, 952
BstDEI	CTNAG	7 cut(s)	444, 809, 858, 1046, 1349, 2036, 2078
BstDSI	CCRYGG	1 cut(s)	909
BstENI	CCTNNNNNAGG	1 cut(s)	659
BstF5I	GGATG	6 cut(s)	556, 592, 685, 1339, 1759, 1814
BstFNI	CGCG	2 cut(s)	322, 330
BstHHI	GCGC	1 cut(s)	324
BstKTI	GATC	6 cut(s)	694, 1030, 1144, 1613, 1882, 1887
BstMAI	GTCTC	3 cut(s)	353, 919, 1568
BstMBI	GATC	6 cut(s)	691, 1027, 1141, 1610, 1879, 1884
BstMCI	CGRYCG	2 cut(s)	184, 391
BstMWI	GCNNNNNNNGC	4 cut(s)	480, 821, 830, 1343
BstNI	CCWGG	2 cut(s)	598, 1586
BstNSI	RCATGY	1 cut(s)	1950
BstSCI	CCNGG	3 cut(s)	582, 596, 1584
BstSFI	CTRYAG	1 cut(s)	1826
BstSLI	GKGCMC	1 cut(s)	1138
BstUI	CGCG	2 cut(s)	322, 330
BstV1I	GCAGC	5 cut(s)	311, 517, 1634, 1651, 1824
BstX2I	RGATCY	2 cut(s)	1610, 1884
BstYI	RGATCY	2 cut(s)	1610, 1884
BsuI	GTATCC	1 cut(s)	611
BsuRI	GGCC	3 cut(s)	344, 419, 1536
BtgI	CCRYGG	1 cut(s)	909
BtrI	CACGTC	1 cut(s)	731
BtsCI	GGATG	6 cut(s)	556, 592, 685, 1339, 1759, 1814
BtsIMutI	CAGTG	4 cut(s)	888, 1136, 1192, 2011
Cac8I	GCNNGC	6 cut(s)	332, 468, 472, 556, 724, 952
CciI	TCATGA	1 cut(s)	2106
CfoI	GCGC	1 cut(s)	324
Cfr10I	RCCGGY	2 cut(s)	390, 833
Cfr13I	GGNCC	2 cut(s)	343, 1299
Csp6I	GTAC	2 cut(s)	1483, 1838
CspAI	ACCGGT	1 cut(s)	390
CviQI	GTAC	2 cut(s)	1483, 1838
DdeI	CTNAG	7 cut(s)	444, 809, 858, 1046, 1349, 2036, 2078
DpnI	GATC	6 cut(s)	693, 1029, 1143, 1612, 1881, 1886
DpnII	GATC	6 cut(s)	691, 1027, 1141, 1610, 1879, 1884
DriI	GACNNNNNGTC	1 cut(s)	877
EaeI	YGGCCR	1 cut(s)	1534
Eam1104I	CTCTTC	3 cut(s)	110, 266, 1968
Eam1105I	GACNNNNNGTC	1 cut(s)	877
EarI	CTCTTC	3 cut(s)	110, 266, 1968
Eco130I	CCWWGG	1 cut(s)	909
Eco24I	GRGCYC	3 cut(s)	336, 1389, 1708
Eco31I	GGTCTC	2 cut(s)	353, 919
Eco32I	GATATC	2 cut(s)	1008, 1293
Eco47I	GGWCC	1 cut(s)	1299
Eco57I	CTGAAG	1 cut(s)	1342
Eco88I	CYCGRG	1 cut(s)	1035
EcoNI	CCTNNNNNAGG	1 cut(s)	659
EcoO109I	RGGNCCY	1 cut(s)	343
EcoRII	CCWGG	2 cut(s)	596, 1584
EcoRV	GATATC	2 cut(s)	1008, 1293
EcoT14I	CCWWGG	1 cut(s)	909
EcoT22I	ATGCAT	1 cut(s)	1329
EcoT38I	GRGCYC	3 cut(s)	336, 1389, 1708
ErhI	CCWWGG	1 cut(s)	909
FalI	AAGNNNNNCTT	2 cut(s)	332, 364
FaqI	GGGAC	1 cut(s)	948
FauI	CCCGC	2 cut(s)	411, 1426
FauNDI	CATATG	1 cut(s)	1165
FbaI	TGATCA	2 cut(s)	691, 1027
FblI	GTMKAC	1 cut(s)	1453
Fnu4HI	GCNGC	6 cut(s)	325, 328, 531, 1623, 1665, 1813
FokI	GGATG	6 cut(s)	563, 599, 692, 1346, 1766, 1821
FriOI	GRGCYC	3 cut(s)	336, 1389, 1708
Fsp4HI	GCNGC	6 cut(s)	325, 328, 531, 1623, 1665, 1813
FspBI	CTAG	2 cut(s)	579, 2160
GlaI	GCGC	1 cut(s)	323
GluI	GCNGC	6 cut(s)	325, 328, 531, 1623, 1665, 1813
GsaI	CCCAGC	1 cut(s)	738
GsuI	CTGGAG	1 cut(s)	619
HaeIII	GGCC	3 cut(s)	344, 419, 1536
HapII	CCGG	3 cut(s)	391, 583, 834
HhaI	GCGC	1 cut(s)	324
Hin1I	GRCGYC	1 cut(s)	878
Hin6I	GCGC	1 cut(s)	322
HinP1I	GCGC	1 cut(s)	322
HincII	GTYRAC	4 cut(s)	6, 796, 1454, 1525
HindII	GTYRAC	4 cut(s)	6, 796, 1454, 1525
HindIII	AAGCTT	2 cut(s)	302, 1240
HinfI	GANTC	7 cut(s)	457, 488, 700, 797, 1182, 1633, 2074
HpaII	CCGG	3 cut(s)	391, 583, 834
HphI	GGTGA	8 cut(s)	29, 127, 1087, 1486, 1652, 1777, 1930, 2159
Hpy166II	GTNNAC	5 cut(s)	6, 796, 1136, 1454, 1525
Hpy188III	TCNNGA	8 cut(s)	386, 426, 1037, 1074, 1562, 1679, 2080, 2107
Hpy8I	GTNNAC	5 cut(s)	6, 796, 1136, 1454, 1525
HpyAV	CCTTC	6 cut(s)	232, 246, 409, 748, 973, 1978
HpyCH4III	ACNGT	4 cut(s)	511, 623, 2006, 2189
HpyCH4IV	ACGT	3 cut(s)	730, 878, 1953
HpyF10VI	GCNNNNNNNGC	4 cut(s)	480, 821, 830, 1343
HpyF3I	CTNAG	7 cut(s)	444, 809, 858, 1046, 1349, 2036, 2078
HpySE526I	ACGT	3 cut(s)	730, 878, 1953
Hsp92I	GRCGYC	1 cut(s)	878
HspAI	GCGC	1 cut(s)	322
Ksp22I	TGATCA	2 cut(s)	691, 1027
Kzo9I	GATC	6 cut(s)	691, 1027, 1141, 1610, 1879, 1884
LmnI	GCTCC	3 cut(s)	191, 1190, 1703
Lsp1109I	GCAGC	5 cut(s)	311, 517, 1634, 1651, 1824
LweI	GCATC	6 cut(s)	541, 937, 1324, 1475, 1799, 1800
MaeI	CTAG	2 cut(s)	579, 2160
MaeII	ACGT	3 cut(s)	730, 878, 1953
MaeIII	GTNAC	5 cut(s)	1093, 1340, 1396, 1949, 2183
MalI	GATC	6 cut(s)	693, 1029, 1143, 1612, 1881, 1886
MbiI	CCGCTC	1 cut(s)	186
MboI	GATC	6 cut(s)	691, 1027, 1141, 1610, 1879, 1884
MflI	RGATCY	2 cut(s)	1610, 1884
MhlI	GDGCHC	5 cut(s)	336, 817, 1138, 1389, 1708
MluCI	AATT	7 cut(s)	863, 889, 969, 1649, 1658, 1992, 2101
MlyI	GAGTC	1 cut(s)	791
MmeI	TCCRAC	3 cut(s)	516, 974, 1746
Mph1103I	ATGCAT	1 cut(s)	1329
MroXI	GAANNNNTTC	2 cut(s)	1181, 1992
MseI	TTAA	5 cut(s)	1079, 1550, 1616, 1850, 2070
MslI	CAYNNNNRTG	5 cut(s)	1131, 1164, 1220, 1332, 2063
MspCI	CTTAAG	1 cut(s)	1549
MspI	CCGG	3 cut(s)	391, 583, 834
MspR9I	CCNGG	3 cut(s)	584, 598, 1586
Mva1269I	GAATGC	2 cut(s)	647, 2058
MvaI	CCWGG	2 cut(s)	598, 1586
MvnI	CGCG	2 cut(s)	322, 330
MwoI	GCNNNNNNNGC	4 cut(s)	480, 821, 830, 1343
NciI	CCSGG	1 cut(s)	584
NcoI	CCATGG	1 cut(s)	909
NdeI	CATATG	1 cut(s)	1165
NdeII	GATC	6 cut(s)	691, 1027, 1141, 1610, 1879, 1884
NlaIV	GGNNCC	3 cut(s)	1590, 1689, 1705
NmuCI	GTSAC	1 cut(s)	1093
NsiI	ATGCAT	1 cut(s)	1329
NspI	RCATGY	1 cut(s)	1950
PaeR7I	CTCGAG	1 cut(s)	1035
PagI	TCATGA	1 cut(s)	2106
PciI	ACATGT	1 cut(s)	1946
PctI	GAATGC	2 cut(s)	647, 2058
PdmI	GAANNNNTTC	2 cut(s)	1181, 1992
PfeI	GAWTC	6 cut(s)	457, 488, 700, 1182, 1633, 2074
PflFI	GACNNNGTC	2 cut(s)	986, 1091
PinAI	ACCGGT	1 cut(s)	390
PkrI	GCNGC	6 cut(s)	326, 329, 532, 1624, 1666, 1814
PleI	GAGTC	1 cut(s)	791
PpsI	GAGTC	1 cut(s)	791
PscI	ACATGT	1 cut(s)	1946
Psp1406I	AACGTT	1 cut(s)	1953
Psp6I	CCWGG	2 cut(s)	596, 1584
PspFI	CCCAGC	1 cut(s)	734
PspGI	CCWGG	2 cut(s)	596, 1584
PspN4I	GGNNCC	3 cut(s)	1590, 1689, 1705
PspPI	GGNCC	2 cut(s)	343, 1299
PsuI	RGATCY	2 cut(s)	1610, 1884
PsyI	GACNNNGTC	2 cut(s)	986, 1091
RsaI	GTAC	2 cut(s)	1484, 1839
RsaNI	GTAC	2 cut(s)	1483, 1838
RseI	CAYNNNNRTG	5 cut(s)	1131, 1164, 1220, 1332, 2063
SalI	GTCGAC	1 cut(s)	1452
SaqAI	TTAA	5 cut(s)	1079, 1550, 1616, 1850, 2070
SatI	GCNGC	6 cut(s)	325, 328, 531, 1623, 1665, 1813
Sau3AI	GATC	6 cut(s)	691, 1027, 1141, 1610, 1879, 1884
Sau96I	GGNCC	2 cut(s)	343, 1299
SchI	GAGTC	1 cut(s)	791
ScrFI	CCNGG	3 cut(s)	584, 598, 1586
SduI	GDGCHC	5 cut(s)	336, 817, 1138, 1389, 1708
SfaNI	GCATC	6 cut(s)	541, 937, 1324, 1475, 1799, 1800
SfcI	CTRYAG	1 cut(s)	1826
Sfr274I	CTCGAG	1 cut(s)	1035
SinI	GGWCC	1 cut(s)	1299
SlaI	CTCGAG	1 cut(s)	1035
SmiMI	CAYNNNNRTG	5 cut(s)	1131, 1164, 1220, 1332, 2063
SmlI	CTYRAG	5 cut(s)	1035, 1502, 1549, 1562, 1679
SmoI	CTYRAG	5 cut(s)	1035, 1502, 1549, 1562, 1679
Sse9I	AATT	7 cut(s)	863, 889, 969, 1649, 1658, 1992, 2101
SsiI	CCGC	7 cut(s)	184, 328, 367, 404, 726, 1433, 1801
SspI	AATATT	1 cut(s)	787
SspMI	CTAG	2 cut(s)	579, 2160
StyD4I	CCNGG	3 cut(s)	582, 596, 1584
StyI	CCWWGG	1 cut(s)	909
TaaI	ACNGT	4 cut(s)	511, 623, 2006, 2189
TaiI	ACGT	3 cut(s)	733, 881, 1956
TaqI	TCGA	4 cut(s)	387, 425, 1036, 1453
TasI	AATT	7 cut(s)	863, 889, 969, 1649, 1658, 1992, 2101
TatI	WGTACW	1 cut(s)	1482
TauI	GCSGC	1 cut(s)	330
TfiI	GAWTC	6 cut(s)	457, 488, 700, 1182, 1633, 2074
Tru1I	TTAA	5 cut(s)	1079, 1550, 1616, 1850, 2070
Tru9I	TTAA	5 cut(s)	1079, 1550, 1616, 1850, 2070
TscAI	CASTG	4 cut(s)	888, 1143, 1192, 2011
TseFI	GTSAC	1 cut(s)	1093
TseI	GCWGC	5 cut(s)	324, 530, 1622, 1664, 1812
Tsp45I	GTSAC	1 cut(s)	1093
TspGWI	ACGGA	2 cut(s)	299, 692
TspRI	CASTG	4 cut(s)	888, 1143, 1192, 2011
Tth111I	GACNNNGTC	2 cut(s)	986, 1091
Vha464I	CTTAAG	1 cut(s)	1549
VneI	GTGCAC	1 cut(s)	1134
VpaK11BI	GGWCC	1 cut(s)	1299
XagI	CCTNNNNNAGG	1 cut(s)	659
XapI	RAATTY	2 cut(s)	889, 1658
XceI	RCATGY	1 cut(s)	1950
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2177
XhoI	CTCGAG	1 cut(s)	1035
XmiI	GTMKAC	1 cut(s)	1453
XmnI	GAANNNNTTC	2 cut(s)	1181, 1992
XspI	CTAG	2 cut(s)	579, 2160
ZraI	GACGTC	1 cut(s)	879
Zsp2I	ATGCAT	1 cut(s)	1329

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.