Pentatricopeptide repeat-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G14820 |
| fragaria_vesca | FvH4_4g16280 |
| malus_domestica | MD16G1195600.v1.1 |
| prunus_persica | Prupe.1G015600_v2.0.a1 |
| pyrus_communis | pycom16g16480 |
| rosa_chinensis | RchiOBHm_Chr4g0415871 |
| rosa_laevigata | RLG00000008032 |
| rosa_multiflora | Rmu_co8517385.1_g000001 Rmu_sc0002438.1_g000005 |
| rosa_rugosa | Rorug04G0137100 |
| rosa_samantha | Rh4BG196800 Rh4CG209900 |
| rosa_wichuraiana | Rw4G016860 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 800 |
| AccII | CGCG | 1 cut(s) | 282 |
| AccIII | TCCGGA | 1 cut(s) | 2055 |
| AclWI | GGATC | 5 cut(s) | 521, 656, 1058, 1125, 1594 |
| AcoI | YGGCCR | 2 cut(s) | 393, 601 |
| AcsI | RAATTY | 2 cut(s) | 865, 1354 |
| AcuI | CTGAAG | 1 cut(s) | 404 |
| AfaI | GTAC | 3 cut(s) | 53, 590, 1815 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 472, 507, 1212 |
| AgsI | TTSAA | 8 cut(s) | 235, 632, 903, 920, 1336, 1442, 2031, 2097 |
| AjnI | CCWGG | 2 cut(s) | 566, 1218 |
| Alw21I | GWGCWC | 2 cut(s) | 1114, 1485 |
| Alw26I | GTCTC | 3 cut(s) | 470, 552, 1613 |
| Alw44I | GTGCAC | 1 cut(s) | 1110 |
| AlwI | GGATC | 5 cut(s) | 521, 656, 1058, 1125, 1594 |
| Aor13HI | TCCGGA | 1 cut(s) | 2055 |
| AoxI | GGCC | 3 cut(s) | 312, 393, 601 |
| ApaLI | GTGCAC | 1 cut(s) | 1110 |
| ApeKI | GCWGC | 3 cut(s) | 379, 1598, 1640 |
| ApoI | RAATTY | 2 cut(s) | 865, 1354 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1968 |
| AspLEI | GCGC | 6 cut(s) | 282, 299, 791, 977, 1189, 1292 |
| AspS9I | GGNCC | 3 cut(s) | 313, 463, 1275 |
| AsuC2I | CCSGG | 1 cut(s) | 481 |
| AsuHPI | GGTGA | 3 cut(s) | 97, 1628, 1906 |
| AvaII | GGWCC | 2 cut(s) | 463, 1275 |
| BaeGI | GKGCMC | 1 cut(s) | 1114 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 69, 102, 1805, 1838 |
| BalI | TGGCCA | 2 cut(s) | 395, 603 |
| BanII | GRGCYC | 2 cut(s) | 306, 1684 |
| BauI | CACGAG | 2 cut(s) | 1817, 1921 |
| BbsI | GAAGAC | 1 cut(s) | 2073 |
| Bbv12I | GWGCWC | 2 cut(s) | 1114, 1485 |
| BbvI | GCAGC | 3 cut(s) | 366, 1585, 1627 |
| BccI | CCATC | 6 cut(s) | 236, 267, 415, 1588, 1670, 1716 |
| BceAI | ACGGC | 1 cut(s) | 68 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1957, 1991 |
| BciT130I | CCWGG | 2 cut(s) | 568, 1220 |
| BciVI | GTATCC | 1 cut(s) | 97 |
| BcnI | CCSGG | 1 cut(s) | 481 |
| BcoDI | GTCTC | 3 cut(s) | 470, 552, 1613 |
| BfaI | CTAG | 3 cut(s) | 26, 1314, 2136 |
| BfoI | RGCGCY | 2 cut(s) | 978, 1293 |
| BfuAI | ACCTGC | 1 cut(s) | 800 |
| BfuI | GTATCC | 1 cut(s) | 97 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1688 |
| BglII | AGATCT | 1 cut(s) | 1860 |
| BisI | GCNGC | 5 cut(s) | 377, 380, 501, 1599, 1641 |
| BlpI | GCTNAGC | 3 cut(s) | 206, 300, 834 |
| BlsI | GCNGC | 5 cut(s) | 378, 381, 502, 1600, 1642 |
| Bme1390I | CCNGG | 3 cut(s) | 481, 568, 1220 |
| Bme18I | GGWCC | 2 cut(s) | 463, 1275 |
| BmgT120I | GGNCC | 3 cut(s) | 313, 463, 1275 |
| BmiI | GGNNCC | 5 cut(s) | 465, 657, 1217, 1665, 1681 |
| BmrFI | CCNGG | 3 cut(s) | 481, 568, 1220 |
| BmrI | ACTGGG | 1 cut(s) | 917 |
| BmsI | GCATC | 4 cut(s) | 284, 511, 913, 1481 |
| BmuI | ACTGGG | 1 cut(s) | 917 |
| BpiI | GAAGAC | 1 cut(s) | 2073 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1519, 1551 |
| BpmI | CTGGAG | 2 cut(s) | 589, 991 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 206, 300, 834 |
| BpuEI | CTTGAG | 3 cut(s) | 996, 1559, 1676 |
| BpuMI | CCSGG | 1 cut(s) | 481 |
| Bsa29I | ATCGAT | 1 cut(s) | 1445 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1839 |
| BsaI | GGTCTC | 1 cut(s) | 470 |
| BsaWI | WCCGGW | 1 cut(s) | 2055 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 467, 497, 1671, 1701, 1769, 1799 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 472, 507, 1212 |
| Bse118I | RCCGGY | 1 cut(s) | 1517 |
| Bse1I | ACTGG | 3 cut(s) | 912, 1067, 1119 |
| Bse3DI | GCAATG | 2 cut(s) | 891, 1560 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1839 |
| BseAI | TCCGGA | 1 cut(s) | 2055 |
| BseBI | CCWGG | 2 cut(s) | 568, 1220 |
| BseCI | ATCGAT | 1 cut(s) | 1445 |
| BseGI | GGATG | 5 cut(s) | 339, 352, 426, 526, 1496 |
| BseJI | GATNNNNATC | 1 cut(s) | 1839 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 472, 507, 1212 |
| BseMI | GCAATG | 2 cut(s) | 891, 1560 |
| BseMII | CTCAG | 3 cut(s) | 197, 291, 848 |
| BseNI | ACTGG | 3 cut(s) | 912, 1067, 1119 |
| BseRI | GAGGAG | 5 cut(s) | 170, 173, 178, 352, 1436 |
| BseSI | GKGCMC | 1 cut(s) | 1114 |
| BseXI | GCAGC | 3 cut(s) | 366, 1585, 1627 |
| BsgI | GTGCAG | 1 cut(s) | 178 |
| Bsh1236I | CGCG | 1 cut(s) | 282 |
| Bsh1285I | CGRYCG | 1 cut(s) | 154 |
| BshFI | GGCC | 3 cut(s) | 314, 395, 603 |
| BshVI | ATCGAT | 1 cut(s) | 1445 |
| BsiEI | CGRYCG | 1 cut(s) | 154 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1114, 1485 |
| BsiSI | CCGG | 3 cut(s) | 480, 1518, 2056 |
| BslFI | GGGAC | 1 cut(s) | 924 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 472, 507, 1212 |
| BsmAI | GTCTC | 3 cut(s) | 470, 552, 1613 |
| BsmFI | GGGAC | 1 cut(s) | 924 |
| BsmI | GAATGC | 3 cut(s) | 369, 617, 2034 |
| BsnI | GGCC | 3 cut(s) | 314, 395, 603 |
| Bso31I | GGTCTC | 1 cut(s) | 470 |
| Bsp1286I | GDGCHC | 4 cut(s) | 306, 1114, 1485, 1684 |
| Bsp13I | TCCGGA | 1 cut(s) | 2055 |
| Bsp143I | GATC | 8 cut(s) | 513, 661, 1003, 1063, 1117, 1586, 1855, 1860 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 206, 300, 834 |
| BspANI | GGCC | 3 cut(s) | 314, 395, 603 |
| BspCNI | CTCAG | 3 cut(s) | 198, 292, 847 |
| BspDI | ATCGAT | 1 cut(s) | 1445 |
| BspEI | TCCGGA | 1 cut(s) | 2055 |
| BspFNI | CGCG | 1 cut(s) | 282 |
| BspHI | TCATGA | 1 cut(s) | 2082 |
| BspLI | GGNNCC | 5 cut(s) | 465, 657, 1217, 1665, 1681 |
| BspMI | ACCTGC | 1 cut(s) | 800 |
| BspPI | GGATC | 5 cut(s) | 521, 656, 1058, 1125, 1594 |
| BspTNI | GGTCTC | 1 cut(s) | 470 |
| BsrDI | GCAATG | 2 cut(s) | 891, 1560 |
| BsrFI | RCCGGY | 1 cut(s) | 1517 |
| BsrI | ACTGG | 3 cut(s) | 912, 1067, 1119 |
| BssAI | RCCGGY | 1 cut(s) | 1517 |
| BssMI | GATC | 8 cut(s) | 513, 661, 1003, 1063, 1117, 1586, 1855, 1860 |
| BssSI | CACGAG | 2 cut(s) | 1817, 1921 |
| Bst2BI | CACGAG | 2 cut(s) | 1817, 1921 |
| Bst2UI | CCWGG | 2 cut(s) | 568, 1220 |
| Bst4CI | ACNGT | 5 cut(s) | 434, 528, 593, 1982, 2006 |
| Bst6I | CTCTTC | 3 cut(s) | 627, 1426, 1941 |
| BstC8I | GCNNGC | 2 cut(s) | 1096, 1388 |
| BstDEI | CTNAG | 6 cut(s) | 206, 300, 834, 1022, 1125, 1773 |
| BstF5I | GGATG | 5 cut(s) | 339, 352, 426, 526, 1496 |
| BstFNI | CGCG | 1 cut(s) | 282 |
| BstH2I | RGCGCY | 2 cut(s) | 978, 1293 |
| BstHHI | GCGC | 6 cut(s) | 282, 299, 791, 977, 1189, 1292 |
| BstKTI | GATC | 8 cut(s) | 516, 664, 1006, 1066, 1120, 1589, 1858, 1863 |
| BstMAI | GTCTC | 3 cut(s) | 470, 552, 1613 |
| BstMBI | GATC | 8 cut(s) | 513, 661, 1003, 1063, 1117, 1586, 1855, 1860 |
| BstMCI | CGRYCG | 1 cut(s) | 154 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 797, 806, 1319, 1657, 1688, 2070 |
| BstNI | CCWGG | 2 cut(s) | 568, 1220 |
| BstSCI | CCNGG | 3 cut(s) | 479, 566, 1218 |
| BstSLI | GKGCMC | 1 cut(s) | 1114 |
| BstUI | CGCG | 1 cut(s) | 282 |
| BstV1I | GCAGC | 3 cut(s) | 366, 1585, 1627 |
| BstV2I | GAAGAC | 1 cut(s) | 2073 |
| BstX2I | RGATCY | 3 cut(s) | 661, 1586, 1860 |
| BstYI | RGATCY | 3 cut(s) | 661, 1586, 1860 |
| Bsu15I | ATCGAT | 1 cut(s) | 1445 |
| BsuI | GTATCC | 1 cut(s) | 97 |
| BsuRI | GGCC | 3 cut(s) | 314, 395, 603 |
| BsuTUI | ATCGAT | 1 cut(s) | 1445 |
| BtsCI | GGATG | 5 cut(s) | 339, 352, 426, 526, 1496 |
| BtsI | GCAGTG | 2 cut(s) | 612, 1768 |
| BtsIMutI | CAGTG | 5 cut(s) | 612, 1074, 1112, 1768, 1987 |
| BveI | ACCTGC | 1 cut(s) | 800 |
| Cac8I | GCNNGC | 2 cut(s) | 1096, 1388 |
| CciI | TCATGA | 1 cut(s) | 2082 |
| CfoI | GCGC | 6 cut(s) | 282, 299, 791, 977, 1189, 1292 |
| Cfr10I | RCCGGY | 1 cut(s) | 1517 |
| Cfr13I | GGNCC | 3 cut(s) | 313, 463, 1275 |
| ClaI | ATCGAT | 1 cut(s) | 1445 |
| Csp6I | GTAC | 3 cut(s) | 52, 589, 1814 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1109, 1144 |
| CviQI | GTAC | 3 cut(s) | 52, 589, 1814 |
| DdeI | CTNAG | 6 cut(s) | 206, 300, 834, 1022, 1125, 1773 |
| DpnI | GATC | 8 cut(s) | 515, 663, 1005, 1065, 1119, 1588, 1857, 1862 |
| DpnII | GATC | 8 cut(s) | 513, 661, 1003, 1063, 1117, 1586, 1855, 1860 |
| EaeI | YGGCCR | 2 cut(s) | 393, 601 |
| Eam1104I | CTCTTC | 3 cut(s) | 627, 1426, 1941 |
| EarI | CTCTTC | 3 cut(s) | 627, 1426, 1941 |
| EciI | GGCGGA | 2 cut(s) | 82, 363 |
| Eco24I | GRGCYC | 2 cut(s) | 306, 1684 |
| Eco31I | GGTCTC | 1 cut(s) | 470 |
| Eco32I | GATATC | 2 cut(s) | 984, 1269 |
| Eco47I | GGWCC | 2 cut(s) | 463, 1275 |
| Eco57I | CTGAAG | 1 cut(s) | 404 |
| EcoO109I | RGGNCCY | 1 cut(s) | 313 |
| EcoRII | CCWGG | 2 cut(s) | 566, 1218 |
| EcoRV | GATATC | 2 cut(s) | 984, 1269 |
| EcoT22I | ATGCAT | 1 cut(s) | 1496 |
| EcoT38I | GRGCYC | 2 cut(s) | 306, 1684 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1005, 1037 |
| FaqI | GGGAC | 1 cut(s) | 924 |
| FauI | CCCGC | 3 cut(s) | 73, 1205, 1893 |
| FauNDI | CATATG | 1 cut(s) | 1407 |
| Fnu4HI | GCNGC | 5 cut(s) | 377, 380, 501, 1599, 1641 |
| FokI | GGATG | 5 cut(s) | 346, 359, 433, 533, 1503 |
| FriOI | GRGCYC | 2 cut(s) | 306, 1684 |
| Fsp4HI | GCNGC | 5 cut(s) | 377, 380, 501, 1599, 1641 |
| FspBI | CTAG | 3 cut(s) | 26, 1314, 2136 |
| GlaI | GCGC | 6 cut(s) | 281, 298, 790, 976, 1188, 1291 |
| GluI | GCNGC | 5 cut(s) | 377, 380, 501, 1599, 1641 |
| GsuI | CTGGAG | 2 cut(s) | 589, 991 |
| HaeII | RGCGCY | 2 cut(s) | 978, 1293 |
| HaeIII | GGCC | 3 cut(s) | 314, 395, 603 |
| HapII | CCGG | 3 cut(s) | 480, 1518, 2056 |
| HhaI | GCGC | 6 cut(s) | 282, 299, 791, 977, 1189, 1292 |
| Hin6I | GCGC | 6 cut(s) | 280, 297, 789, 975, 1187, 1290 |
| HinP1I | GCGC | 6 cut(s) | 280, 297, 789, 975, 1187, 1290 |
| HincII | GTYRAC | 4 cut(s) | 772, 1147, 1180, 1501 |
| HindII | GTYRAC | 4 cut(s) | 772, 1147, 1180, 1501 |
| HindIII | AAGCTT | 1 cut(s) | 1044 |
| HinfI | GANTC | 8 cut(s) | 161, 427, 773, 1434, 1442, 1609, 1969, 2050 |
| HpaII | CCGG | 3 cut(s) | 480, 1518, 2056 |
| HphI | GGTGA | 3 cut(s) | 97, 1628, 1906 |
| Hpy166II | GTNNAC | 8 cut(s) | 124, 358, 772, 1112, 1147, 1180, 1501, 1816 |
| Hpy188I | TCNGA | 7 cut(s) | 463, 491, 597, 1473, 1608, 1860, 2126 |
| Hpy188III | TCNNGA | 7 cut(s) | 291, 665, 1013, 1538, 1655, 2056, 2083 |
| Hpy8I | GTNNAC | 8 cut(s) | 124, 358, 772, 1112, 1147, 1180, 1501, 1816 |
| HpyAV | CCTTC | 5 cut(s) | 20, 379, 410, 949, 1954 |
| HpyCH4III | ACNGT | 5 cut(s) | 434, 528, 593, 1982, 2006 |
| HpyCH4IV | ACGT | 1 cut(s) | 928 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 797, 806, 1319, 1657, 1688, 2070 |
| HpyF3I | CTNAG | 6 cut(s) | 206, 300, 834, 1022, 1125, 1773 |
| HpySE526I | ACGT | 1 cut(s) | 928 |
| HspAI | GCGC | 6 cut(s) | 280, 297, 789, 975, 1187, 1290 |
| Kpn2I | TCCGGA | 1 cut(s) | 2055 |
| Kzo9I | GATC | 8 cut(s) | 513, 661, 1003, 1063, 1117, 1586, 1855, 1860 |
| LmnI | GCTCC | 5 cut(s) | 279, 655, 786, 972, 1679 |
| Lsp1109I | GCAGC | 3 cut(s) | 366, 1585, 1627 |
| LweI | GCATC | 4 cut(s) | 284, 511, 913, 1481 |
| MaeI | CTAG | 3 cut(s) | 26, 1314, 2136 |
| MaeII | ACGT | 1 cut(s) | 928 |
| MaeIII | GTNAC | 2 cut(s) | 1069, 1372 |
| MalI | GATC | 8 cut(s) | 515, 663, 1005, 1065, 1119, 1588, 1857, 1862 |
| MboI | GATC | 8 cut(s) | 513, 661, 1003, 1063, 1117, 1586, 1855, 1860 |
| MflI | RGATCY | 3 cut(s) | 661, 1586, 1860 |
| MhlI | GDGCHC | 4 cut(s) | 306, 1114, 1485, 1684 |
| MlsI | TGGCCA | 2 cut(s) | 395, 603 |
| MluCI | AATT | 5 cut(s) | 865, 945, 1354, 1625, 1871 |
| MluNI | TGGCCA | 2 cut(s) | 395, 603 |
| MlyI | GAGTC | 3 cut(s) | 155, 767, 1443 |
| MmeI | TCCRAC | 1 cut(s) | 168 |
| Mox20I | TGGCCA | 2 cut(s) | 395, 603 |
| Mph1103I | ATGCAT | 1 cut(s) | 1496 |
| MroI | TCCGGA | 1 cut(s) | 2055 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1968 |
| MscI | TGGCCA | 2 cut(s) | 395, 603 |
| MseI | TTAA | 4 cut(s) | 582, 1055, 1826, 2046 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1107, 1140 |
| Msp20I | TGGCCA | 2 cut(s) | 395, 603 |
| MspA1I | CMGCKG | 1 cut(s) | 379 |
| MspI | CCGG | 3 cut(s) | 480, 1518, 2056 |
| MspR9I | CCNGG | 3 cut(s) | 481, 568, 1220 |
| Mva1269I | GAATGC | 3 cut(s) | 369, 617, 2034 |
| MvaI | CCWGG | 2 cut(s) | 568, 1220 |
| MvnI | CGCG | 1 cut(s) | 282 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 797, 806, 1319, 1657, 1688, 2070 |
| NciI | CCSGG | 1 cut(s) | 481 |
| NdeI | CATATG | 1 cut(s) | 1407 |
| NdeII | GATC | 8 cut(s) | 513, 661, 1003, 1063, 1117, 1586, 1855, 1860 |
| NlaIV | GGNNCC | 5 cut(s) | 465, 657, 1217, 1665, 1681 |
| NmuCI | GTSAC | 1 cut(s) | 1069 |
| NsiI | ATGCAT | 1 cut(s) | 1496 |
| PagI | TCATGA | 1 cut(s) | 2082 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 156, 1815 |
| PctI | GAATGC | 3 cut(s) | 369, 617, 2034 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1968 |
| PfeI | GAWTC | 5 cut(s) | 427, 1442, 1609, 1969, 2050 |
| PflFI | GACNNNGTC | 1 cut(s) | 962 |
| PkrI | GCNGC | 5 cut(s) | 378, 381, 502, 1600, 1642 |
| PleI | GAGTC | 3 cut(s) | 155, 767, 1442 |
| PpsI | GAGTC | 3 cut(s) | 155, 767, 1442 |
| Psp6I | CCWGG | 2 cut(s) | 566, 1218 |
| PspGI | CCWGG | 2 cut(s) | 566, 1218 |
| PspN4I | GGNNCC | 5 cut(s) | 465, 657, 1217, 1665, 1681 |
| PspPI | GGNCC | 3 cut(s) | 313, 463, 1275 |
| PsuI | RGATCY | 3 cut(s) | 661, 1586, 1860 |
| PsyI | GACNNNGTC | 1 cut(s) | 962 |
| RsaI | GTAC | 3 cut(s) | 53, 590, 1815 |
| RsaNI | GTAC | 3 cut(s) | 52, 589, 1814 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1107, 1140 |
| SaqAI | TTAA | 4 cut(s) | 582, 1055, 1826, 2046 |
| SatI | GCNGC | 5 cut(s) | 377, 380, 501, 1599, 1641 |
| Sau3AI | GATC | 8 cut(s) | 513, 661, 1003, 1063, 1117, 1586, 1855, 1860 |
| Sau96I | GGNCC | 3 cut(s) | 313, 463, 1275 |
| SchI | GAGTC | 3 cut(s) | 155, 767, 1443 |
| ScrFI | CCNGG | 3 cut(s) | 481, 568, 1220 |
| SduI | GDGCHC | 4 cut(s) | 306, 1114, 1485, 1684 |
| SfaNI | GCATC | 4 cut(s) | 284, 511, 913, 1481 |
| SinI | GGWCC | 2 cut(s) | 463, 1275 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1107, 1140 |
| SmlI | CTYRAG | 3 cut(s) | 1011, 1538, 1655 |
| SmoI | CTYRAG | 3 cut(s) | 1011, 1538, 1655 |
| Sse9I | AATT | 5 cut(s) | 865, 945, 1354, 1625, 1871 |
| SspMI | CTAG | 3 cut(s) | 26, 1314, 2136 |
| StyD4I | CCNGG | 3 cut(s) | 479, 566, 1218 |
| TaaI | ACNGT | 5 cut(s) | 434, 528, 593, 1982, 2006 |
| TaiI | ACGT | 1 cut(s) | 931 |
| TaqI | TCGA | 4 cut(s) | 150, 609, 1006, 1445 |
| TasI | AATT | 5 cut(s) | 865, 945, 1354, 1625, 1871 |
| TauI | GCSGC | 2 cut(s) | 379, 503 |
| TfiI | GAWTC | 5 cut(s) | 427, 1442, 1609, 1969, 2050 |
| Tru1I | TTAA | 4 cut(s) | 582, 1055, 1826, 2046 |
| Tru9I | TTAA | 4 cut(s) | 582, 1055, 1826, 2046 |
| TscAI | CASTG | 5 cut(s) | 619, 1074, 1119, 1768, 1987 |
| TseFI | GTSAC | 1 cut(s) | 1069 |
| TseI | GCWGC | 3 cut(s) | 379, 1598, 1640 |
| Tsp45I | GTSAC | 1 cut(s) | 1069 |
| TspGWI | ACGGA | 1 cut(s) | 799 |
| TspRI | CASTG | 5 cut(s) | 619, 1074, 1119, 1768, 1987 |
| Tth111I | GACNNNGTC | 1 cut(s) | 962 |
| VneI | GTGCAC | 1 cut(s) | 1110 |
| VpaK11BI | GGWCC | 2 cut(s) | 463, 1275 |
| XapI | RAATTY | 2 cut(s) | 865, 1354 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1968 |
| XspI | CTAG | 3 cut(s) | 26, 1314, 2136 |
| Zsp2I | ATGCAT | 1 cut(s) | 1496 |