FvH4_4g19440

Dihydrolipoyl dehydrogenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0010455
Physical Location & Seq
Reverse (-)
23078168 .. 23083186
5019 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g19440.t2

Sequence Viewer

Length: 1701 bp
ATGCAGGCCTCGCTTTCTCTCCCTACTCTCTCCCCCACTCTTCCCAGATCAAACTACGCCGTCCAGTCCACGCTGCCTCTCGCTCCCTCCAGGCCGATCAACCTCCGCTTCTGCGGCCTCCGGCGAGAGGTTTTCGGATTCTCGTCGCTCAGCCGGTCAGACTCGCAGCGCGTCCGGCTCGCCCCGGCGTCGCGGTCGAGGAAAGTCTCGGCGGCTTTGTCTGACAATGGAAGCGCTCCCAAGTCGTTTGATTATGACTTGCTCATCATCGGTGCCGGCGTCGGCGGTCACGGCGCTGCTCTTCACGCCGTCGAGAAGGGTCTGAAAACCGCCATCGTAGAGGGAGATGTGGTGGGTGGAACATGTGTTAACAGAGGATGTGTTCCATCTAAAGCTCTTCTAGCAGTGAGTGGTCGGATGCGAGAGCTTCAAAACGAACATCACCTCAAGGCTTTGGGTTTGCAGGTTTCAGCAGCTGGTTATGACAGACAGGGAGTGGCTGATCATGCAAATAATCTTGCATCAAAAATCCGGTCTAGTTTGACCAACTCAATGAAGTCGCTTGGAGTGGATATACTGACAGGTTTCGGTACAATCCTGGGCCCCCAAAAGGTGAAGGTTGGAGCATCTGACAAAGTAGTTACTGCAAAAAATATAATCATTGCTACTGGTTCTGTTCCTTTCGTTCCTAAGGGCATTGAAGTCGATGGGAAGACTGTAATTACGAGCGACCATGCACTCAAATTGGAGTCTGTTCCTGATTGGATTGCTATTGTTGGAAGTGGTTACATTGGTCTTGAGTTCAGTGATGTGTATACGGCACTTGGAAGTGAGGTTACTTTTATTGAAGCTTTGGATCAGCTTATGCCTGGTTTTGATCCCGAGATTGGGAAGTTAGCCCAGAGGGTTCTAATTAATCCACGAAGGATTGACTATCAAACTGGAGTATTTGCCAGCAAGATCACCCCAGCCAAGGATGGTAAACCAGTCATCATTGAACTAATTGATGCAAAGACCAAGGAACCAAGAGATACTCTAGAGGTAGATGCAGCATTAATTGCCACTGGAAGAGCCCCATTCACACATGGTCTTGGATTGGAGAATATTGATGTTGCAACACAACGTGGTTTTATCCCTGTTGATGAGCGGATGAGGGTAATAGATGCAAATGGCAAATTGGTTCCTAACCTGTTTTGCATTGGTGATGCCAACGGCAAGATGATGCTTGCTCATGCAGCAAGTGCACAAGGCATTTCAGTGGTTGAACAAGTCACAGGAAGAGATCACGTGCTCAACCATTTGAGCATCCCTGCAGCTTGCTTCACTCATCCTGAAATCAGTATGGTTGGATTGACAGAGCCCCAAGCAAGAGAGTTAGCTGAGAAGGAGGGATTTGAAGTAAGTGTTGCCAAGACAAGTTTCAAGGCCAACACAAAGGCCCTTGCAGAAAATGAAGGAGAGGGACTTGCAAAGTTGATATACCGACCAGATAACGGAGAGATCCTTGGCGTTCACATCTTTGGATTGCATGCGGCAGACCTCATTCATGAGGCATCCAATGCCATAGCATTGGGAACACGTATTCAAGATCTCAAACTGGCTGTCCATGCACATCCTACCTTGTCTGAAGTGCTAGATGAACTTTACAAGTCAGCGACGGTTAAAGAGCATGTTTCTAGCCCTCAAGCAGTTGCAGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004148 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006082 GO:0006084 GO:0006085 GO:0006086 GO:0006090 GO:0006139 GO:0006163 GO:0006164 GO:0006637 GO:0006725 GO:0006732 GO:0006753 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009117 GO:0009150 GO:0009152 GO:0009165 GO:0009259 GO:0009260 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009941 GO:0009987 GO:0016491 GO:0016651 GO:0016667 GO:0016668 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0019752 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032787 GO:0033865 GO:0033866 GO:0033875 GO:0034030 GO:0034032 GO:0034033 GO:0034641 GO:0034654 GO:0035383 GO:0035384 GO:0042221 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044272 GO:0044281 GO:0044422 GO:0044424 GO:0044428 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046390 GO:0046483 GO:0046685 GO:0050896 GO:0051186 GO:0051188 GO:0055086 GO:0055114 GO:0070013 GO:0071616 GO:0071704 GO:0072521 GO:0072522 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576
KEGG Pathways
Metabolic & Signaling
ko00010 ko00020 ko00260 ko00280 ko00620 ko00630 ko00640 ko01100 ko01110 ko01120 ko01130 ko01200 map00010 map00020 map00260 map00280 map00620 map00630 map00640 map01100 map01110 map01120 map01130 map01200
Pfam Domains
Protein Families
Pyr_redox_2 Pyr_redox_dim

Protein Analysis

567

Amino Acids

60.01

Weight (kDa)

6.8

Isoelectric Point (pI)

31.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pyr_redox_2 PF07992 85 - 417 3.9e-59 Pyridine nucleotide-disulphide oxidoreductase
GIDA PF01134 86 - 225 8.4e-06 Glucose inhibited division protein A
Pyr_redox PF00070 256 - 327 5.3e-14 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_dim PF02852 436 - 547 1.1e-30 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010455)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G16950 AT3G16950 AT4G16155
fragaria_vesca FvH4_4g19440 FvH4_4g19440 FvH4_4g19440 FvH4_4g19440 FvH4_4g19440
malus_domestica MD16G1157500.v1.1
prunus_persica Prupe.1G122400_v2.0.a1
pyrus_communis pycom13g13410
rosa_chinensis RchiOBHm_Chr4g0424491
rosa_laevigata RLG00000007470
rosa_multiflora Rmu_sc0002603.1_g000006
rosa_roxburghii Rroxscaffold_5G00366420
rosa_rugosa Rorug04G0198000
rosa_samantha Rh4AG254300 Rh4BG259700 Rh4CG270800 Rh4DG254000
rosa_wichuraiana Rw4G021960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 454
AccB1I GGYRCC 1 cut(s) 272
AccBSI CCGCTC 1 cut(s) 1147
AccI GTMKAC 1 cut(s) 815
AccII CGCG 2 cut(s) 171, 193
AciI CCGC 8 cut(s) 106, 114, 193, 212, 285, 330, 1147, 1532
AclWI GGATC 3 cut(s) 864, 872, 1495
AcuI CTGAAG 1 cut(s) 1647
AcvI CACGTG 1 cut(s) 1288
AcyI GRCGYC 2 cut(s) 188, 279
AdeI CACNNNGTG 1 cut(s) 1124
AfaI GTAC 1 cut(s) 592
AfeI AGCGCT 1 cut(s) 235
AfiI CCNNNNNNNGG 6 cut(s) 127, 610, 887, 888, 973, 1493
AflIII ACRYGT 2 cut(s) 362, 1577
AgsI TTSAA 8 cut(s) 431, 701, 848, 998, 1265, 1397, 1423, 1586
AjnI CCWGG 3 cut(s) 89, 597, 868
AjuI GAANNNNNNNTTGG 2 cut(s) 1403, 1435
AluBI AGCT 7 cut(s) 395, 427, 476, 851, 862, 1316, 1379
AluI AGCT 7 cut(s) 395, 427, 476, 851, 862, 1316, 1379
Alw21I GWGCWC 2 cut(s) 1246, 1293
Alw26I GTCTC 1 cut(s) 211
Alw44I GTGCAC 1 cut(s) 1242
AlwI GGATC 3 cut(s) 864, 872, 1495
AlwNI CAGNNNCTG 1 cut(s) 476
Ama87I CYCGRG 1 cut(s) 881
Aor51HI AGCGCT 1 cut(s) 235
AoxI GGCC 6 cut(s) 6, 92, 115, 601, 1425, 1437
ApaI GGGCCC 1 cut(s) 605
ApaLI GTGCAC 1 cut(s) 1242
ApeKI GCWGC 7 cut(s) 73, 166, 296, 473, 1049, 1235, 1313
ArsI GACNNNNNNTTYG 4 cut(s) 518, 550, 1587, 1619
AseI ATTAAT 2 cut(s) 915, 1055
AspLEI GCGC 3 cut(s) 171, 236, 296
AspS9I GGNCC 3 cut(s) 601, 602, 1438
AsuC2I CCSGG 1 cut(s) 185
AsuHPI GGTGA 4 cut(s) 434, 625, 955, 1214
AvaI CYCGRG 1 cut(s) 881
AxyI CCTNAGG 1 cut(s) 690
BaeGI GKGCMC 2 cut(s) 605, 1246
BanI GGYRCC 1 cut(s) 272
BanII GRGCYC 3 cut(s) 605, 1075, 1362
BarI GAAGNNNNNNTAC 2 cut(s) 820, 852
BbrPI CACGTG 1 cut(s) 1288
BbsI GAAGAC 1 cut(s) 719
Bbv12I GWGCWC 2 cut(s) 1246, 1293
BbvI GCAGC 7 cut(s) 60, 178, 283, 485, 1061, 1247, 1325
BccI CCATC 4 cut(s) 341, 394, 701, 971
BceAI ACGGC 5 cut(s) 44, 293, 307, 834, 1228
BcgI CGANNNNNNTGC 2 cut(s) 685, 719
BciT130I CCWGG 3 cut(s) 91, 599, 870
BclI TGATCA 1 cut(s) 502
BcnI CCSGG 1 cut(s) 185
BcoDI GTCTC 1 cut(s) 211
BfaI CTAG 5 cut(s) 401, 537, 1037, 1634, 1677
BfmI CTRYAG 1 cut(s) 1311
BfoI RGCGCY 2 cut(s) 237, 297
BfuAI ACCTGC 1 cut(s) 454
BglII AGATCT 1 cut(s) 1588
BlpI GCTNAGC 1 cut(s) 149
Bme1390I CCNGG 4 cut(s) 91, 185, 599, 870
BmeT110I CYCGRG 1 cut(s) 881
BmgT120I GGNCC 3 cut(s) 601, 602, 1438
BmiI GGNNCC 5 cut(s) 274, 603, 604, 1023, 1182
BmrFI CCNGG 4 cut(s) 91, 185, 599, 870
BpiI GAAGAC 1 cut(s) 719
BpmI CTGGAG 2 cut(s) 73, 963
Bpu1102I GCTNAGC 1 cut(s) 149
BpuEI CTTGAG 3 cut(s) 431, 818, 1668
BpuMI CCSGG 1 cut(s) 185
BsaAI YACGTR 2 cut(s) 1288, 1580
BsaHI GRCGYC 2 cut(s) 188, 279
BsaJI CCNNGG 5 cut(s) 183, 598, 972, 1017, 1504
BsaWI WCCGGW 1 cut(s) 531
BsaXI ACNNNNNCTCC 2 cut(s) 336, 366
Bsc4I CCNNNNNNNGG 6 cut(s) 127, 610, 887, 888, 973, 1493
Bse118I RCCGGY 2 cut(s) 153, 275
Bse1I ACTGG 6 cut(s) 64, 673, 946, 986, 1069, 1602
Bse21I CCTNAGG 1 cut(s) 690
Bse3DI GCAATG 1 cut(s) 660
BseBI CCWGG 3 cut(s) 91, 599, 870
BseDI CCNNGG 5 cut(s) 183, 598, 972, 1017, 1504
BseGI GGATG 8 cut(s) 383, 423, 982, 1155, 1305, 1327, 1553, 1612
BseLI CCNNNNNNNGG 6 cut(s) 127, 610, 887, 888, 973, 1493
BseMI GCAATG 1 cut(s) 660
BseMII CTCAG 2 cut(s) 163, 1371
BseNI ACTGG 6 cut(s) 64, 673, 946, 986, 1069, 1602
BseSI GKGCMC 2 cut(s) 605, 1246
BseXI GCAGC 7 cut(s) 60, 178, 283, 485, 1061, 1247, 1325
BseYI CCCAGC 1 cut(s) 967
Bsh1236I CGCG 2 cut(s) 171, 193
Bsh1285I CGRYCG 1 cut(s) 197
BshFI GGCC 6 cut(s) 8, 94, 117, 603, 1427, 1439
BshNI GGYRCC 1 cut(s) 272
BsiEI CGRYCG 1 cut(s) 197
BsiHKAI GWGCWC 2 cut(s) 1246, 1293
BsiHKCI CYCGRG 1 cut(s) 881
BsiSI CCGG 6 cut(s) 121, 154, 175, 185, 276, 532
BslFI GGGAC 1 cut(s) 1476
BslI CCNNNNNNNGG 6 cut(s) 127, 610, 887, 888, 973, 1493
BsmAI GTCTC 1 cut(s) 211
BsmFI GGGAC 1 cut(s) 1476
BsnI GGCC 6 cut(s) 8, 94, 117, 603, 1427, 1439
BsoBI CYCGRG 1 cut(s) 881
Bsp120I GGGCCC 1 cut(s) 601
Bsp1286I GDGCHC 5 cut(s) 605, 1075, 1246, 1293, 1362
Bsp143I GATC 9 cut(s) 47, 96, 502, 856, 877, 960, 1282, 1500, 1588
Bsp1720I GCTNAGC 1 cut(s) 149
BspACI CCGC 8 cut(s) 106, 114, 193, 212, 285, 330, 1147, 1532
BspANI GGCC 6 cut(s) 8, 94, 117, 603, 1427, 1439
BspCNI CTCAG 2 cut(s) 162, 1372
BspFNI CGCG 2 cut(s) 171, 193
BspHI TCATGA 1 cut(s) 1546
BspLI GGNNCC 5 cut(s) 274, 603, 604, 1023, 1182
BspMAI CTGCAG 1 cut(s) 1315
BspMI ACCTGC 1 cut(s) 454
BspPI GGATC 3 cut(s) 864, 872, 1495
BspQI GCTCTTC 3 cut(s) 306, 402, 1063
BspT107I GGYRCC 1 cut(s) 272
BsrBI CCGCTC 1 cut(s) 1147
BsrDI GCAATG 1 cut(s) 660
BsrFI RCCGGY 2 cut(s) 153, 275
BsrI ACTGG 6 cut(s) 64, 673, 946, 986, 1069, 1602
BssAI RCCGGY 2 cut(s) 153, 275
BssECI CCNNGG 5 cut(s) 183, 598, 972, 1017, 1504
BssMI GATC 9 cut(s) 47, 96, 502, 856, 877, 960, 1282, 1500, 1588
BssNAI GTATAC 1 cut(s) 816
BssNI GRCGYC 2 cut(s) 188, 279
BssT1I CCWWGG 3 cut(s) 972, 1017, 1504
Bst1107I GTATAC 1 cut(s) 816
Bst2UI CCWGG 3 cut(s) 91, 599, 870
Bst4CI ACNGT 2 cut(s) 718, 1660
Bst6I CTCTTC 5 cut(s) 45, 306, 402, 1063, 1273
BstACI GRCGYC 2 cut(s) 188, 279
BstAPI GCANNNNNTGC 3 cut(s) 1058, 1241, 1559
BstBAI YACGTR 2 cut(s) 1288, 1580
BstC8I GCNNGC 7 cut(s) 6, 180, 277, 955, 1227, 1318, 1530
BstDEI CTNAG 3 cut(s) 149, 690, 1380
BstF5I GGATG 8 cut(s) 383, 423, 982, 1155, 1305, 1327, 1553, 1612
BstFNI CGCG 2 cut(s) 171, 193
BstH2I RGCGCY 2 cut(s) 237, 297
BstHHI GCGC 3 cut(s) 171, 236, 296
BstKTI GATC 9 cut(s) 50, 99, 505, 859, 880, 963, 1285, 1503, 1591
BstMAI GTCTC 1 cut(s) 211
BstMBI GATC 9 cut(s) 47, 96, 502, 856, 877, 960, 1282, 1500, 1588
BstMCI CGRYCG 1 cut(s) 197
BstNI CCWGG 3 cut(s) 91, 599, 870
BstNSI RCATGY 3 cut(s) 366, 1532, 1673
BstSCI CCNGG 4 cut(s) 89, 183, 597, 868
BstSFI CTRYAG 1 cut(s) 1311
BstSLI GKGCMC 2 cut(s) 605, 1246
BstUI CGCG 2 cut(s) 171, 193
BstV1I GCAGC 7 cut(s) 60, 178, 283, 485, 1061, 1247, 1325
BstV2I GAAGAC 1 cut(s) 719
BstX2I RGATCY 2 cut(s) 1500, 1588
BstXI CCANNNNNNTGG 1 cut(s) 1570
BstYI RGATCY 2 cut(s) 1500, 1588
BstZ17I GTATAC 1 cut(s) 816
Bsu36I CCTNAGG 1 cut(s) 690
BsuRI GGCC 6 cut(s) 8, 94, 117, 603, 1427, 1439
BtsCI GGATG 8 cut(s) 383, 423, 982, 1155, 1305, 1327, 1553, 1612
BtsI GCAGTG 1 cut(s) 411
BtsIMutI CAGTG 4 cut(s) 411, 811, 1062, 1263
BveI ACCTGC 1 cut(s) 454
Cac8I GCNNGC 7 cut(s) 6, 180, 277, 955, 1227, 1318, 1530
CaiI CAGNNNCTG 1 cut(s) 476
CciI TCATGA 1 cut(s) 1546
CfoI GCGC 3 cut(s) 171, 236, 296
Cfr10I RCCGGY 2 cut(s) 153, 275
Cfr13I GGNCC 3 cut(s) 601, 602, 1438
CseI GACGC 3 cut(s) 160, 177, 268
Csp6I GTAC 1 cut(s) 591
CviAII CATG 9 cut(s) 363, 506, 734, 1085, 1232, 1529, 1547, 1607, 1670
CviQI GTAC 1 cut(s) 591
DdeI CTNAG 3 cut(s) 149, 690, 1380
DpnI GATC 9 cut(s) 49, 98, 504, 858, 879, 962, 1284, 1502, 1590
DpnII GATC 9 cut(s) 47, 96, 502, 856, 877, 960, 1282, 1500, 1588
DraIII CACNNNGTG 1 cut(s) 1124
Eam1104I CTCTTC 5 cut(s) 45, 306, 402, 1063, 1273
EarI CTCTTC 5 cut(s) 45, 306, 402, 1063, 1273
Eco130I CCWWGG 3 cut(s) 972, 1017, 1504
Eco147I AGGCCT 1 cut(s) 8
Eco24I GRGCYC 3 cut(s) 605, 1075, 1362
Eco47III AGCGCT 1 cut(s) 235
Eco57I CTGAAG 1 cut(s) 1647
Eco72I CACGTG 1 cut(s) 1288
Eco81I CCTNAGG 1 cut(s) 690
Eco88I CYCGRG 1 cut(s) 881
EcoO109I RGGNCCY 2 cut(s) 602, 1438
EcoRII CCWGG 3 cut(s) 89, 597, 868
EcoT14I CCWWGG 3 cut(s) 972, 1017, 1504
EcoT38I GRGCYC 3 cut(s) 605, 1075, 1362
ErhI CCWWGG 3 cut(s) 972, 1017, 1504
FaeI CATG 9 cut(s) 366, 509, 737, 1088, 1235, 1532, 1550, 1610, 1673
FaqI GGGAC 1 cut(s) 1476
FatI CATG 9 cut(s) 362, 505, 733, 1084, 1231, 1528, 1546, 1606, 1669
FbaI TGATCA 1 cut(s) 502
FblI GTMKAC 1 cut(s) 815
FokI GGATG 8 cut(s) 390, 430, 989, 1162, 1292, 1314, 1540, 1599
FriOI GRGCYC 3 cut(s) 605, 1075, 1362
FspBI CTAG 5 cut(s) 401, 537, 1037, 1634, 1677
GlaI GCGC 3 cut(s) 170, 235, 295
GsaI CCCAGC 1 cut(s) 971
GsuI CTGGAG 2 cut(s) 73, 963
HaeII RGCGCY 2 cut(s) 237, 297
HaeIII GGCC 6 cut(s) 8, 94, 117, 603, 1427, 1439
HapII CCGG 6 cut(s) 121, 154, 175, 185, 276, 532
HgaI GACGC 3 cut(s) 160, 177, 268
HhaI GCGC 3 cut(s) 171, 236, 296
Hin1I GRCGYC 2 cut(s) 188, 279
Hin1II CATG 9 cut(s) 366, 509, 737, 1088, 1235, 1532, 1550, 1610, 1673
Hin6I GCGC 3 cut(s) 169, 234, 294
HinP1I GCGC 3 cut(s) 169, 234, 294
HincII GTYRAC 1 cut(s) 370
HindII GTYRAC 1 cut(s) 370
HindIII AAGCTT 1 cut(s) 849
HinfI GANTC 3 cut(s) 138, 161, 749
HpaI GTTAAC 1 cut(s) 370
HpaII CCGG 6 cut(s) 121, 154, 175, 185, 276, 532
HphI GGTGA 4 cut(s) 434, 625, 955, 1214
Hpy166II GTNNAC 6 cut(s) 69, 370, 816, 983, 1244, 1513
Hpy188I TCNGA 7 cut(s) 137, 160, 223, 324, 417, 631, 1627
Hpy188III TCNNGA 8 cut(s) 313, 758, 797, 881, 1037, 1331, 1547, 1586
Hpy8I GTNNAC 6 cut(s) 69, 370, 816, 983, 1244, 1513
Hpy99I CGWCG 5 cut(s) 148, 193, 284, 314, 1660
HpyAV CCTTC 5 cut(s) 310, 610, 918, 1378, 1448
HpyCH4III ACNGT 2 cut(s) 718, 1660
HpyCH4IV ACGT 3 cut(s) 1123, 1287, 1579
HpyF3I CTNAG 3 cut(s) 149, 690, 1380
HpySE526I ACGT 3 cut(s) 1123, 1287, 1579
Hsp92I GRCGYC 2 cut(s) 188, 279
Hsp92II CATG 9 cut(s) 366, 509, 737, 1088, 1235, 1532, 1550, 1610, 1673
HspAI GCGC 3 cut(s) 169, 234, 294
KroI GCCGGC 1 cut(s) 275
KroNI GCCGGC 1 cut(s) 277
Ksp22I TGATCA 1 cut(s) 502
KspAI GTTAAC 1 cut(s) 370
Kzo9I GATC 9 cut(s) 47, 96, 502, 856, 877, 960, 1282, 1500, 1588
LguI GCTCTTC 3 cut(s) 306, 402, 1063
LmnI GCTCC 3 cut(s) 88, 241, 623
Lsp1109I GCAGC 7 cut(s) 60, 178, 283, 485, 1061, 1247, 1325
MaeI CTAG 5 cut(s) 401, 537, 1037, 1634, 1677
MaeII ACGT 3 cut(s) 1123, 1287, 1579
MaeIII GTNAC 5 cut(s) 287, 640, 785, 835, 1270
MalI GATC 9 cut(s) 49, 98, 504, 858, 879, 962, 1284, 1502, 1590
MbiI CCGCTC 1 cut(s) 1147
MboI GATC 9 cut(s) 47, 96, 502, 856, 877, 960, 1282, 1500, 1588
MboII GAAGA 6 cut(s) 32, 293, 389, 724, 1080, 1290
MflI RGATCY 2 cut(s) 1500, 1588
MhlI GDGCHC 5 cut(s) 605, 1075, 1246, 1293, 1362
MluCI AATT 6 cut(s) 720, 743, 912, 1002, 1056, 1175
MlyI GAGTC 2 cut(s) 155, 758
MmeI TCCRAC 4 cut(s) 395, 601, 757, 1327
MroNI GCCGGC 1 cut(s) 275
MseI TTAA 4 cut(s) 369, 915, 1055, 1662
MslI CAYNNNNRTG 1 cut(s) 1256
MspA1I CMGCKG 1 cut(s) 476
MspI CCGG 6 cut(s) 121, 154, 175, 185, 276, 532
MspR9I CCNGG 4 cut(s) 91, 185, 599, 870
MvaI CCWGG 3 cut(s) 91, 599, 870
MvnI CGCG 2 cut(s) 171, 193
NaeI GCCGGC 1 cut(s) 277
NciI CCSGG 1 cut(s) 185
NdeII GATC 9 cut(s) 47, 96, 502, 856, 877, 960, 1282, 1500, 1588
NgoMIV GCCGGC 1 cut(s) 275
NlaIII CATG 9 cut(s) 366, 509, 737, 1088, 1235, 1532, 1550, 1610, 1673
NlaIV GGNNCC 5 cut(s) 274, 603, 604, 1023, 1182
NmeAIII GCCGAG 1 cut(s) 188
NmuCI GTSAC 2 cut(s) 287, 1270
NspI RCATGY 3 cut(s) 366, 1532, 1673
PaeI GCATGC 1 cut(s) 1532
PagI TCATGA 1 cut(s) 1546
PceI AGGCCT 1 cut(s) 8
PciI ACATGT 1 cut(s) 362
PciSI GCTCTTC 3 cut(s) 306, 402, 1063
PcsI WCGNNNNNNNCGW 1 cut(s) 276
PdiI GCCGGC 1 cut(s) 277
PfeI GAWTC 1 cut(s) 138
PleI GAGTC 2 cut(s) 155, 757
PmaCI CACGTG 1 cut(s) 1288
PmlI CACGTG 1 cut(s) 1288
PpsI GAGTC 2 cut(s) 155, 757
Ppu21I YACGTR 2 cut(s) 1288, 1580
PscI ACATGT 1 cut(s) 362
PshBI ATTAAT 2 cut(s) 915, 1055
Psp6I CCWGG 3 cut(s) 89, 597, 868
PspCI CACGTG 1 cut(s) 1288
PspFI CCCAGC 1 cut(s) 967
PspGI CCWGG 3 cut(s) 89, 597, 868
PspN4I GGNNCC 5 cut(s) 274, 603, 604, 1023, 1182
PspOMI GGGCCC 1 cut(s) 601
PspPI GGNCC 3 cut(s) 601, 602, 1438
PstI CTGCAG 1 cut(s) 1315
PstNI CAGNNNCTG 1 cut(s) 476
PsuI RGATCY 2 cut(s) 1500, 1588
PvuII CAGCTG 1 cut(s) 476
RsaI GTAC 1 cut(s) 592
RsaNI GTAC 1 cut(s) 591
RseI CAYNNNNRTG 1 cut(s) 1256
SapI GCTCTTC 3 cut(s) 306, 402, 1063
SaqAI TTAA 4 cut(s) 369, 915, 1055, 1662
Sau3AI GATC 9 cut(s) 47, 96, 502, 856, 877, 960, 1282, 1500, 1588
Sau96I GGNCC 3 cut(s) 601, 602, 1438
SchI GAGTC 2 cut(s) 155, 758
ScrFI CCNGG 4 cut(s) 91, 185, 599, 870
SduI GDGCHC 5 cut(s) 605, 1075, 1246, 1293, 1362
SfcI CTRYAG 1 cut(s) 1311
SmiMI CAYNNNNRTG 1 cut(s) 1256
SmlI CTYRAG 3 cut(s) 446, 797, 1683
SmoI CTYRAG 3 cut(s) 446, 797, 1683
SphI GCATGC 1 cut(s) 1532
Sse9I AATT 6 cut(s) 720, 743, 912, 1002, 1056, 1175
SseBI AGGCCT 1 cut(s) 8
SsiI CCGC 8 cut(s) 106, 114, 193, 212, 285, 330, 1147, 1532
SspI AATATT 1 cut(s) 1105
SspMI CTAG 5 cut(s) 401, 537, 1037, 1634, 1677
StuI AGGCCT 1 cut(s) 8
StyD4I CCNGG 4 cut(s) 89, 183, 597, 868
StyI CCWWGG 3 cut(s) 972, 1017, 1504
TaaI ACNGT 2 cut(s) 718, 1660
TaiI ACGT 3 cut(s) 1126, 1290, 1582
TaqI TCGA 3 cut(s) 197, 312, 705
TasI AATT 6 cut(s) 720, 743, 912, 1002, 1056, 1175
TauI GCSGC 3 cut(s) 117, 215, 1535
TfiI GAWTC 1 cut(s) 138
Tru1I TTAA 4 cut(s) 369, 915, 1055, 1662
Tru9I TTAA 4 cut(s) 369, 915, 1055, 1662
TscAI CASTG 4 cut(s) 411, 811, 1069, 1263
TseFI GTSAC 2 cut(s) 287, 1270
TseI GCWGC 7 cut(s) 73, 166, 296, 473, 1049, 1235, 1313
Tsp45I GTSAC 2 cut(s) 287, 1270
TspDTI ATGAA 4 cut(s) 569, 1467, 1535, 1653
TspGWI ACGGA 1 cut(s) 1509
TspRI CASTG 4 cut(s) 411, 811, 1069, 1263
VneI GTGCAC 1 cut(s) 1242
VspI ATTAAT 2 cut(s) 915, 1055
XbaI TCTAGA 1 cut(s) 1036
XceI RCATGY 3 cut(s) 366, 1532, 1673
XmiI GTMKAC 1 cut(s) 815
XspI CTAG 5 cut(s) 401, 537, 1037, 1634, 1677
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.