MD16G1157500.v1.1

Dihydrolipoyl dehydrogenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
OG0010455
Physical Location & Seq
Forward (+)
12603867 .. 12608711
4845 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1157500.v1.1.491

Sequence Viewer

Length: 1707 bp
ATGCAGGCCTCCCTCTCTCTGCCCGCCCTCTCCCACGCCGTCCCCAGATCAAACTACGTCGTTCAGTCCGCCCTCCCTCTCCCGCCGTACAAGCCTATCAATCTCCGATTCTGCGGCCTCCACCGCGAGGCCTTGGGATTCTCGCATCTCGCCCACTCCGACTCGCACCGCGTCCGTCTCTCAGCTCCTTCCCGCTCTGCAACAATCTCGGCCTCGTCCTCCTCCGGCAATGCCAGCCCTCCCAAGTCGTTCGACTACGACTTGCTCATCATCGGCGCCGGCGTCGGTGGCCACGGCGCTGCTCTCCACGCCGTCGAGAAGGGTTTAAAAACTGCCATCGTGGAGGGAGATGTGGTGGGTGGAACATGTGTTAACAGGGGATGTGTTCCATCTAAAGCTCTTCTGGCAGTTAGTGGTCGGATGCGTGAGCTTCAGAATGAACATCACCTTAAGGCTTTAGGTTTGCAGGTTTCAGCCGCTGGATATGACAGACAGGGAGTGGCTGATCACGCGAATAATCTTGCAACAAAAATACGTAATAGTTTGACCAATTCTATGAATTCTCTTGGGGTGGACATTCTGACAGGTGTTGGTACAATTTTGGGCCCTCAAAAGGTGCAAATTGGATCATCTGACAAAGTAGTAACTGCAAAAGATATAATCATTGCCACCGGCTCTGTTCCTTTTGTTCCTAAGGGCGTTGAAGTGGACGGAAAGACTGTAATTACAAGTGACCATGCACTCAAATTGGAGTTTGTTCCAGAGTGGATTGCAATTGTTGGAAGTGGTTACATAGGTCTTGAGTTCAGTGACGTATATACAGCTCTTGGGAGTGAGGTTACTTTCATTGAAGCTTTAGATCAGCTTATGCCTGGTTTTGATCCTGAGATTGGAAAGTTAGCCCAGAGGGTTCTAATTAATCCACGGAAGATTGATTATCAAACTGGGGTATTCGCATCCAAGATCACACCAGCCAAGGATGGGAAACCAGTCACCATTGACCTAATTGATGCAAAGACCAAGGAACCAAAAGAAACTCTTGAGGTAGATGCAGCACTAATTGCAACTGGAAGAGCCCCATTCACACAAGGTCTTGGATTGGAGAATGTTGATGTCGCAACACAACGTGGCTTTATTCCTGTTGATGAGCGGATGCGAGTAATAGATGCAAATGGCAAATTGGTTCCTCACCTATTTTGCATTGGTGATGCTAATGGCAAGATGATGCTTGCTCATGCAGCCAGTGCACAAGGAATTTCAGTGGTTGAGCAAGTCACAGGTAGAGACCACGTGCTCAATCATTTGAGCATTCCTGCAGCATGTTTCACTCATCCAGAAATCAGTATGGTTGGATTGACAGAGCCTCAAGCAAGGGAGAAAGCTGAAAAGGAGGGATTTGAAGTTAGTATTGCCAAGACCAGTTTCAAGGCCAACACAAAGGCGTTAGCAGAAAATGAAGGAGAGGGACTCGCTAAGTTGATATACAGACCAGATAATGGAGAGATTCTTGGAGTTCATATCTTTGGGCTACATGCCGCAGACCTTATTCATGAGGCATCAAATGCGATAGCACTGGGGACACGCATTCAAGAAATCAAATTTGCAGTCCATGCACACCCTACTTTGTCCGAAGTCCTAGACGAACTTTTCAAGTCTGCAAAGGTAGCTCATGTTTCTAGCCCAGTAAGTGAACCAGTTGCAGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004148 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006082 GO:0006084 GO:0006085 GO:0006086 GO:0006090 GO:0006139 GO:0006163 GO:0006164 GO:0006637 GO:0006725 GO:0006732 GO:0006753 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009117 GO:0009150 GO:0009152 GO:0009165 GO:0009259 GO:0009260 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009941 GO:0009987 GO:0016491 GO:0016651 GO:0016667 GO:0016668 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0019752 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032787 GO:0033865 GO:0033866 GO:0033875 GO:0034030 GO:0034032 GO:0034033 GO:0034641 GO:0034654 GO:0035383 GO:0035384 GO:0042221 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044272 GO:0044281 GO:0044422 GO:0044424 GO:0044428 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046390 GO:0046483 GO:0046685 GO:0050896 GO:0051186 GO:0051188 GO:0055086 GO:0055114 GO:0070013 GO:0071616 GO:0071704 GO:0072521 GO:0072522 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576
KEGG Pathways
Metabolic & Signaling
ko00010 ko00020 ko00260 ko00280 ko00620 ko00630 ko00640 ko01100 ko01110 ko01120 ko01130 ko01200 map00010 map00020 map00260 map00280 map00620 map00630 map00640 map01100 map01110 map01120 map01130 map01200
Pfam Domains
Protein Families
Pyr_redox_2 Pyr_redox_dim

Protein Analysis

569

Amino Acids

60.08

Weight (kDa)

6.34

Isoelectric Point (pI)

24.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pyr_redox_2 PF07992 86 - 418 7.4e-60 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox PF00070 257 - 328 1.3e-14 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_dim PF02852 437 - 548 4.2e-30 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010455)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G16950 AT3G16950 AT4G16155
fragaria_vesca FvH4_4g19440 FvH4_4g19440 FvH4_4g19440 FvH4_4g19440 FvH4_4g19440
malus_domestica MD16G1157500.v1.1
prunus_persica Prupe.1G122400_v2.0.a1
pyrus_communis pycom13g13410
rosa_chinensis RchiOBHm_Chr4g0424491
rosa_laevigata RLG00000007470
rosa_multiflora Rmu_sc0002603.1_g000006
rosa_roxburghii Rroxscaffold_5G00366420
rosa_rugosa Rorug04G0198000
rosa_samantha Rh4AG254300 Rh4BG259700 Rh4CG270800 Rh4DG254000
rosa_wichuraiana Rw4G021960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 457
AccB1I GGYRCC 1 cut(s) 275
AccB7I CCANNNNNTGG 1 cut(s) 1496
AccBSI CCGCTC 2 cut(s) 195, 1150
AccII CGCG 3 cut(s) 126, 171, 512
AclWI GGATC 2 cut(s) 634, 875
AcoI YGGCCR 1 cut(s) 289
AcsI RAATTY 3 cut(s) 559, 1254, 1598
AcuI CTGAAG 1 cut(s) 416
AcvI CACGTG 1 cut(s) 1291
AcyI GRCGYC 2 cut(s) 276, 282
AdeI CACNNNGTG 1 cut(s) 1127
AfaI GTAC 2 cut(s) 89, 595
AfiI CCNNNNNNNGG 5 cut(s) 127, 613, 890, 981, 1496
AflII CTTAAG 1 cut(s) 449
AflIII ACRYGT 1 cut(s) 365
AgsI TTSAA 6 cut(s) 704, 851, 1400, 1426, 1589, 1651
AjnI CCWGG 1 cut(s) 871
AjuI GAANNNNNNNTTGG 2 cut(s) 1406, 1438
AluBI AGCT 8 cut(s) 185, 398, 430, 824, 854, 865, 1382, 1667
AluI AGCT 8 cut(s) 185, 398, 430, 824, 854, 865, 1382, 1667
Alw21I GWGCWC 2 cut(s) 1249, 1296
Alw26I GTCTC 2 cut(s) 182, 1278
Alw44I GTGCAC 1 cut(s) 1245
AlwI GGATC 2 cut(s) 634, 875
AlwNI CAGNNNCTG 1 cut(s) 479
AoxI GGCC 7 cut(s) 6, 115, 129, 210, 289, 604, 1428
ApaI GGGCCC 1 cut(s) 608
ApaLI GTGCAC 1 cut(s) 1245
ApeKI GCWGC 4 cut(s) 299, 1052, 1238, 1316
ApoI RAATTY 3 cut(s) 559, 1254, 1598
ArsI GACNNNNNNTTYG 2 cut(s) 1590, 1622
AseI ATTAAT 1 cut(s) 918
AspLEI GCGC 2 cut(s) 278, 299
AspS9I GGNCC 2 cut(s) 604, 605
AsuHPI GGTGA 4 cut(s) 437, 985, 1181, 1217
AxyI CCTNAGG 1 cut(s) 693
BaeGI GKGCMC 2 cut(s) 608, 1249
BalI TGGCCA 1 cut(s) 291
BanI GGYRCC 1 cut(s) 275
BanII GRGCYC 2 cut(s) 608, 1078
BbrPI CACGTG 1 cut(s) 1291
Bbv12I GWGCWC 2 cut(s) 1249, 1296
BbvI GCAGC 4 cut(s) 286, 1064, 1250, 1328
BccI CCATC 3 cut(s) 344, 397, 974
BceAI ACGGC 4 cut(s) 23, 70, 296, 310
BcgI CGANNNNNNTGC 2 cut(s) 189, 223
BciT130I CCWGG 1 cut(s) 873
BclI TGATCA 1 cut(s) 505
BcoDI GTCTC 2 cut(s) 182, 1278
BfaI CTAG 2 cut(s) 1637, 1677
BfmI CTRYAG 1 cut(s) 1314
BfoI RGCGCY 2 cut(s) 279, 300
BfrI CTTAAG 1 cut(s) 449
BfuAI ACCTGC 1 cut(s) 457
BisI GCNGC 7 cut(s) 115, 300, 477, 1053, 1239, 1317, 1536
BlsI GCNGC 7 cut(s) 116, 301, 478, 1054, 1240, 1318, 1537
Bme1390I CCNGG 1 cut(s) 873
BmgT120I GGNCC 2 cut(s) 604, 605
BmiI GGNNCC 4 cut(s) 277, 606, 1026, 1185
BmrFI CCNGG 1 cut(s) 873
BmrI ACTGGG 3 cut(s) 954, 1583, 1676
BmuI ACTGGG 3 cut(s) 954, 1583, 1676
BplI GAGNNNNNCTC 2 cut(s) 1452, 1484
BpuEI CTTGAG 3 cut(s) 821, 1061, 1350
BsaAI YACGTR 2 cut(s) 536, 1291
BsaHI GRCGYC 2 cut(s) 276, 282
BsaI GGTCTC 1 cut(s) 1278
BsaJI CCNNGG 5 cut(s) 132, 292, 923, 975, 1020
BsaXI ACNNNNNCTCC 2 cut(s) 339, 369
Bsc4I CCNNNNNNNGG 5 cut(s) 127, 613, 890, 981, 1496
Bse118I RCCGGY 2 cut(s) 278, 671
Bse1I ACTGG 8 cut(s) 949, 989, 1072, 1242, 1419, 1578, 1682, 1694
Bse21I CCTNAGG 1 cut(s) 693
Bse3DI GCAATG 2 cut(s) 235, 663
BseBI CCWGG 1 cut(s) 873
BseDI CCNNGG 5 cut(s) 132, 292, 923, 975, 1020
BseGI GGATG 6 cut(s) 386, 426, 956, 985, 1158, 1330
BseLI CCNNNNNNNGG 5 cut(s) 127, 613, 890, 981, 1496
BseMI GCAATG 2 cut(s) 235, 663
BseMII CTCAG 2 cut(s) 195, 876
BseNI ACTGG 8 cut(s) 949, 989, 1072, 1242, 1419, 1578, 1682, 1694
BseRI GAGGAG 1 cut(s) 211
BseSI GKGCMC 2 cut(s) 608, 1249
BseXI GCAGC 4 cut(s) 286, 1064, 1250, 1328
Bsh1236I CGCG 3 cut(s) 126, 171, 512
BshFI GGCC 7 cut(s) 8, 117, 131, 212, 291, 606, 1430
BshNI GGYRCC 1 cut(s) 275
BsiHKAI GWGCWC 2 cut(s) 1249, 1296
BsiSI CCGG 3 cut(s) 225, 279, 672
BslFI GGGAC 3 cut(s) 26, 1479, 1591
BslI CCNNNNNNNGG 5 cut(s) 127, 613, 890, 981, 1496
BsmAI GTCTC 2 cut(s) 182, 1278
BsmBI CGTCTC 1 cut(s) 182
BsmFI GGGAC 3 cut(s) 26, 1479, 1591
BsmI GAATGC 2 cut(s) 1308, 1584
BsnI GGCC 7 cut(s) 8, 117, 131, 212, 291, 606, 1430
Bso31I GGTCTC 1 cut(s) 1278
Bsp120I GGGCCC 1 cut(s) 604
Bsp1286I GDGCHC 4 cut(s) 608, 1078, 1249, 1296
Bsp143I GATC 6 cut(s) 47, 505, 626, 859, 880, 963
BspANI GGCC 7 cut(s) 8, 117, 131, 212, 291, 606, 1430
BspCNI CTCAG 2 cut(s) 194, 877
BspFNI CGCG 3 cut(s) 126, 171, 512
BspHI TCATGA 1 cut(s) 1549
BspLI GGNNCC 4 cut(s) 277, 606, 1026, 1185
BspMAI CTGCAG 1 cut(s) 1318
BspMI ACCTGC 1 cut(s) 457
BspPI GGATC 2 cut(s) 634, 875
BspQI GCTCTTC 2 cut(s) 405, 1066
BspT107I GGYRCC 1 cut(s) 275
BspTI CTTAAG 1 cut(s) 449
BspTNI GGTCTC 1 cut(s) 1278
BsrBI CCGCTC 2 cut(s) 195, 1150
BsrDI GCAATG 2 cut(s) 235, 663
BsrFI RCCGGY 2 cut(s) 278, 671
BsrI ACTGG 8 cut(s) 949, 989, 1072, 1242, 1419, 1578, 1682, 1694
BssAI RCCGGY 2 cut(s) 278, 671
BssECI CCNNGG 5 cut(s) 132, 292, 923, 975, 1020
BssMI GATC 6 cut(s) 47, 505, 626, 859, 880, 963
BssNI GRCGYC 2 cut(s) 276, 282
BssT1I CCWWGG 3 cut(s) 132, 975, 1020
Bst2UI CCWGG 1 cut(s) 873
Bst4CI ACNGT 1 cut(s) 721
Bst6I CTCTTC 2 cut(s) 405, 1066
BstACI GRCGYC 2 cut(s) 276, 282
BstAFI CTTAAG 1 cut(s) 449
BstAPI GCANNNNNTGC 4 cut(s) 1061, 1244, 1562, 1610
BstBAI YACGTR 2 cut(s) 536, 1291
BstC8I GCNNGC 5 cut(s) 6, 24, 235, 280, 1230
BstDEI CTNAG 4 cut(s) 181, 693, 885, 1473
BstDSI CCRYGG 2 cut(s) 292, 923
BstF5I GGATG 6 cut(s) 386, 426, 956, 985, 1158, 1330
BstFNI CGCG 3 cut(s) 126, 171, 512
BstH2I RGCGCY 2 cut(s) 279, 300
BstHHI GCGC 2 cut(s) 278, 299
BstKTI GATC 6 cut(s) 50, 508, 629, 862, 883, 966
BstMAI GTCTC 2 cut(s) 182, 1278
BstMBI GATC 6 cut(s) 47, 505, 626, 859, 880, 963
BstNI CCWGG 1 cut(s) 873
BstNSI RCATGY 3 cut(s) 369, 1323, 1535
BstSCI CCNGG 1 cut(s) 871
BstSFI CTRYAG 1 cut(s) 1314
BstSLI GKGCMC 2 cut(s) 608, 1249
BstSNI TACGTA 1 cut(s) 536
BstUI CGCG 3 cut(s) 126, 171, 512
BstV1I GCAGC 4 cut(s) 286, 1064, 1250, 1328
Bsu36I CCTNAGG 1 cut(s) 693
BsuRI GGCC 7 cut(s) 8, 117, 131, 212, 291, 606, 1430
BtgI CCRYGG 2 cut(s) 292, 923
BtsCI GGATG 6 cut(s) 386, 426, 956, 985, 1158, 1330
BtsIMutI CAGTG 4 cut(s) 814, 1249, 1266, 1571
BveI ACCTGC 1 cut(s) 457
Cac8I GCNNGC 5 cut(s) 6, 24, 235, 280, 1230
CaiI CAGNNNCTG 1 cut(s) 479
CciI TCATGA 1 cut(s) 1549
CfoI GCGC 2 cut(s) 278, 299
Cfr10I RCCGGY 2 cut(s) 278, 671
Cfr13I GGNCC 2 cut(s) 604, 605
CseI GACGC 2 cut(s) 160, 271
Csp6I GTAC 2 cut(s) 88, 594
CviAII CATG 8 cut(s) 366, 737, 1235, 1320, 1532, 1550, 1610, 1670
CviQI GTAC 2 cut(s) 88, 594
DdeI CTNAG 4 cut(s) 181, 693, 885, 1473
DinI GGCGCC 1 cut(s) 277
DpnI GATC 6 cut(s) 49, 507, 628, 861, 882, 965
DpnII GATC 6 cut(s) 47, 505, 626, 859, 880, 963
DraI TTTAAA 1 cut(s) 327
DraIII CACNNNGTG 1 cut(s) 1127
EaeI YGGCCR 1 cut(s) 289
Eam1104I CTCTTC 2 cut(s) 405, 1066
EarI CTCTTC 2 cut(s) 405, 1066
EciI GGCGGA 1 cut(s) 58
Eco105I TACGTA 1 cut(s) 536
Eco130I CCWWGG 3 cut(s) 132, 975, 1020
Eco147I AGGCCT 2 cut(s) 8, 131
Eco24I GRGCYC 2 cut(s) 608, 1078
Eco31I GGTCTC 1 cut(s) 1278
Eco57I CTGAAG 1 cut(s) 416
Eco72I CACGTG 1 cut(s) 1291
Eco81I CCTNAGG 1 cut(s) 693
EcoO109I RGGNCCY 1 cut(s) 605
EcoRI GAATTC 1 cut(s) 559
EcoRII CCWGG 1 cut(s) 871
EcoT14I CCWWGG 3 cut(s) 132, 975, 1020
EcoT38I GRGCYC 2 cut(s) 608, 1078
EgeI GGCGCC 1 cut(s) 277
EheI GGCGCC 1 cut(s) 277
ErhI CCWWGG 3 cut(s) 132, 975, 1020
Esp3I CGTCTC 1 cut(s) 182
FaeI CATG 8 cut(s) 369, 740, 1238, 1323, 1535, 1553, 1613, 1673
FalI AAGNNNNNCTT 2 cut(s) 1023, 1055
FaqI GGGAC 3 cut(s) 26, 1479, 1591
FatI CATG 8 cut(s) 365, 736, 1234, 1319, 1531, 1549, 1609, 1669
FauI CCCGC 3 cut(s) 31, 90, 200
FbaI TGATCA 1 cut(s) 505
Fnu4HI GCNGC 7 cut(s) 115, 300, 477, 1053, 1239, 1317, 1536
FokI GGATG 6 cut(s) 393, 433, 943, 992, 1165, 1317
FriOI GRGCYC 2 cut(s) 608, 1078
Fsp4HI GCNGC 7 cut(s) 115, 300, 477, 1053, 1239, 1317, 1536
FspBI CTAG 2 cut(s) 1637, 1677
GlaI GCGC 2 cut(s) 277, 298
GluI GCNGC 7 cut(s) 115, 300, 477, 1053, 1239, 1317, 1536
HaeII RGCGCY 2 cut(s) 279, 300
HaeIII GGCC 7 cut(s) 8, 117, 131, 212, 291, 606, 1430
HapII CCGG 3 cut(s) 225, 279, 672
HgaI GACGC 2 cut(s) 160, 271
HhaI GCGC 2 cut(s) 278, 299
Hin1I GRCGYC 2 cut(s) 276, 282
Hin1II CATG 8 cut(s) 369, 740, 1238, 1323, 1535, 1553, 1613, 1673
Hin6I GCGC 2 cut(s) 276, 297
HinP1I GCGC 2 cut(s) 276, 297
HincII GTYRAC 1 cut(s) 373
HindII GTYRAC 1 cut(s) 373
HindIII AAGCTT 1 cut(s) 852
HinfI GANTC 5 cut(s) 108, 138, 161, 1467, 1504
HpaI GTTAAC 1 cut(s) 373
HpaII CCGG 3 cut(s) 225, 279, 672
HphI GGTGA 4 cut(s) 437, 985, 1181, 1217
Hpy166II GTNNAC 5 cut(s) 373, 574, 709, 1247, 1691
Hpy188I TCNGA 7 cut(s) 107, 160, 420, 435, 582, 634, 1630
Hpy188III TCNNGA 8 cut(s) 316, 761, 800, 884, 1040, 1334, 1550, 1589
Hpy8I GTNNAC 5 cut(s) 373, 574, 709, 1247, 1691
Hpy99I CGWCG 3 cut(s) 62, 287, 317
HpyAV CCTTC 3 cut(s) 198, 313, 1451
HpyCH4III ACNGT 1 cut(s) 721
HpyCH4IV ACGT 5 cut(s) 57, 535, 813, 1126, 1290
HpyF3I CTNAG 4 cut(s) 181, 693, 885, 1473
HpySE526I ACGT 5 cut(s) 57, 535, 813, 1126, 1290
Hsp92I GRCGYC 2 cut(s) 276, 282
Hsp92II CATG 8 cut(s) 369, 740, 1238, 1323, 1535, 1553, 1613, 1673
HspAI GCGC 2 cut(s) 276, 297
KasI GGCGCC 1 cut(s) 275
KroI GCCGGC 1 cut(s) 278
KroNI GCCGGC 1 cut(s) 280
Ksp22I TGATCA 1 cut(s) 505
KspAI GTTAAC 1 cut(s) 373
Kzo9I GATC 6 cut(s) 47, 505, 626, 859, 880, 963
LguI GCTCTTC 2 cut(s) 405, 1066
LmnI GCTCC 1 cut(s) 190
Lsp1109I GCAGC 4 cut(s) 286, 1064, 1250, 1328
MaeI CTAG 2 cut(s) 1637, 1677
MaeII ACGT 5 cut(s) 57, 535, 813, 1126, 1290
MaeIII GTNAC 7 cut(s) 643, 731, 788, 809, 838, 991, 1273
MalI GATC 6 cut(s) 49, 507, 628, 861, 882, 965
MbiI CCGCTC 2 cut(s) 195, 1150
MboI GATC 6 cut(s) 47, 505, 626, 859, 880, 963
MboII GAAGA 3 cut(s) 392, 940, 1083
MfeI CAATTG 1 cut(s) 774
MhlI GDGCHC 4 cut(s) 608, 1078, 1249, 1296
MlsI TGGCCA 1 cut(s) 291
MluNI TGGCCA 1 cut(s) 291
Mly113I GGCGCC 1 cut(s) 276
MlyI GAGTC 2 cut(s) 155, 1461
MmeI TCCRAC 4 cut(s) 183, 398, 760, 1330
Mox20I TGGCCA 1 cut(s) 291
MreI CGCCGGCG 1 cut(s) 278
MroNI GCCGGC 1 cut(s) 278
MscI TGGCCA 1 cut(s) 291
MseI TTAA 4 cut(s) 326, 372, 450, 918
Msp20I TGGCCA 1 cut(s) 291
MspA1I CMGCKG 1 cut(s) 479
MspCI CTTAAG 1 cut(s) 449
MspI CCGG 3 cut(s) 225, 279, 672
MspR9I CCNGG 1 cut(s) 873
MunI CAATTG 1 cut(s) 774
Mva1269I GAATGC 2 cut(s) 1308, 1584
MvaI CCWGG 1 cut(s) 873
MvnI CGCG 3 cut(s) 126, 171, 512
NaeI GCCGGC 1 cut(s) 280
NarI GGCGCC 1 cut(s) 276
NdeII GATC 6 cut(s) 47, 505, 626, 859, 880, 963
NgoMIV GCCGGC 1 cut(s) 278
NlaIII CATG 8 cut(s) 369, 740, 1238, 1323, 1535, 1553, 1613, 1673
NlaIV GGNNCC 4 cut(s) 277, 606, 1026, 1185
NmeAIII GCCGAG 1 cut(s) 188
NmuCI GTSAC 4 cut(s) 731, 809, 991, 1273
NspI RCATGY 3 cut(s) 369, 1323, 1535
PagI TCATGA 1 cut(s) 1549
PceI AGGCCT 2 cut(s) 8, 131
PciI ACATGT 1 cut(s) 365
PciSI GCTCTTC 2 cut(s) 405, 1066
PcsI WCGNNNNNNNCGW 2 cut(s) 156, 279
PctI GAATGC 2 cut(s) 1308, 1584
PdiI GCCGGC 1 cut(s) 280
PfeI GAWTC 3 cut(s) 108, 138, 1504
PflMI CCANNNNNTGG 1 cut(s) 1496
PkrI GCNGC 7 cut(s) 116, 301, 478, 1054, 1240, 1318, 1537
PleI GAGTC 2 cut(s) 155, 1461
PluTI GGCGCC 1 cut(s) 279
PmaCI CACGTG 1 cut(s) 1291
PmlI CACGTG 1 cut(s) 1291
PpsI GAGTC 2 cut(s) 155, 1461
Ppu21I YACGTR 2 cut(s) 536, 1291
PscI ACATGT 1 cut(s) 365
PshBI ATTAAT 1 cut(s) 918
Psp6I CCWGG 1 cut(s) 871
PspCI CACGTG 1 cut(s) 1291
PspGI CCWGG 1 cut(s) 871
PspN4I GGNNCC 4 cut(s) 277, 606, 1026, 1185
PspOMI GGGCCC 1 cut(s) 604
PspPI GGNCC 2 cut(s) 604, 605
PstI CTGCAG 1 cut(s) 1318
PstNI CAGNNNCTG 1 cut(s) 479
RsaI GTAC 2 cut(s) 89, 595
RsaNI GTAC 2 cut(s) 88, 594
SapI GCTCTTC 2 cut(s) 405, 1066
SaqAI TTAA 4 cut(s) 326, 372, 450, 918
SatI GCNGC 7 cut(s) 115, 300, 477, 1053, 1239, 1317, 1536
Sau3AI GATC 6 cut(s) 47, 505, 626, 859, 880, 963
Sau96I GGNCC 2 cut(s) 604, 605
SchI GAGTC 2 cut(s) 155, 1461
ScrFI CCNGG 1 cut(s) 873
SduI GDGCHC 4 cut(s) 608, 1078, 1249, 1296
SfcI CTRYAG 1 cut(s) 1314
SfoI GGCGCC 1 cut(s) 277
SgrAI CRCCGGYG 1 cut(s) 278
SmlI CTYRAG 4 cut(s) 449, 800, 1040, 1365
SmoI CTYRAG 4 cut(s) 449, 800, 1040, 1365
SnaBI TACGTA 1 cut(s) 536
SseBI AGGCCT 2 cut(s) 8, 131
SspDI GGCGCC 1 cut(s) 275
SspMI CTAG 2 cut(s) 1637, 1677
StuI AGGCCT 2 cut(s) 8, 131
StyD4I CCNGG 1 cut(s) 871
StyI CCWWGG 3 cut(s) 132, 975, 1020
TaaI ACNGT 1 cut(s) 721
TaiI ACGT 5 cut(s) 60, 538, 816, 1129, 1293
TaqI TCGA 2 cut(s) 252, 315
TauI GCSGC 3 cut(s) 117, 479, 1538
TfiI GAWTC 3 cut(s) 108, 138, 1504
Tru1I TTAA 4 cut(s) 326, 372, 450, 918
Tru9I TTAA 4 cut(s) 326, 372, 450, 918
TscAI CASTG 4 cut(s) 814, 1249, 1266, 1578
TseFI GTSAC 4 cut(s) 731, 809, 991, 1273
TseI GCWGC 4 cut(s) 299, 1052, 1238, 1316
Tsp45I GTSAC 4 cut(s) 731, 809, 991, 1273
TspDTI ATGAA 6 cut(s) 453, 572, 835, 1470, 1505, 1538
TspGWI ACGGA 3 cut(s) 164, 726, 940
TspRI CASTG 4 cut(s) 814, 1249, 1266, 1578
Van91I CCANNNNNTGG 1 cut(s) 1496
Vha464I CTTAAG 1 cut(s) 449
VneI GTGCAC 1 cut(s) 1245
VspI ATTAAT 1 cut(s) 918
XapI RAATTY 3 cut(s) 559, 1254, 1598
XceI RCATGY 3 cut(s) 369, 1323, 1535
XspI CTAG 2 cut(s) 1637, 1677
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.