Dihydrolipoyl dehydrogenase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G16950 AT3G16950 AT4G16155 |
| fragaria_vesca | FvH4_4g19440 FvH4_4g19440 FvH4_4g19440 FvH4_4g19440 FvH4_4g19440 |
| malus_domestica | MD16G1157500.v1.1 |
| prunus_persica | Prupe.1G122400_v2.0.a1 |
| pyrus_communis | pycom13g13410 |
| rosa_chinensis | RchiOBHm_Chr4g0424491 |
| rosa_laevigata | RLG00000007470 |
| rosa_multiflora | Rmu_sc0002603.1_g000006 |
| rosa_roxburghii | Rroxscaffold_5G00366420 |
| rosa_rugosa | Rorug04G0198000 |
| rosa_samantha | Rh4AG254300 Rh4BG259700 Rh4CG270800 Rh4DG254000 |
| rosa_wichuraiana | Rw4G021960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 439 |
| AccB1I | GGYRCC | 1 cut(s) | 257 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 872 |
| AccI | GTMKAC | 1 cut(s) | 800 |
| AciI | CCGC | 5 cut(s) | 85, 93, 207, 590, 1296 |
| AclWI | GGATC | 2 cut(s) | 616, 857 |
| AcoI | YGGCCR | 1 cut(s) | 271 |
| AcsI | RAATTY | 4 cut(s) | 513, 541, 1236, 1580 |
| AcuI | CTGAAG | 2 cut(s) | 398, 1632 |
| AcyI | GRCGYC | 2 cut(s) | 258, 264 |
| AdeI | CACNNNGTG | 1 cut(s) | 1109 |
| AfaI | GTAC | 3 cut(s) | 153, 577, 1275 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 103, 595, 730, 872, 1478 |
| AflII | CTTAAG | 1 cut(s) | 431 |
| AflIII | ACRYGT | 2 cut(s) | 347, 1562 |
| AgsI | TTSAA | 9 cut(s) | 65, 537, 686, 833, 983, 1250, 1408, 1571, 1633 |
| AjnI | CCWGG | 1 cut(s) | 853 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1388, 1420 |
| AluBI | AGCT | 8 cut(s) | 380, 412, 461, 485, 836, 847, 884, 1364 |
| AluI | AGCT | 8 cut(s) | 380, 412, 461, 485, 836, 847, 884, 1364 |
| Alw26I | GTCTC | 6 cut(s) | 129, 163, 190, 196, 785, 1260 |
| AlwI | GGATC | 2 cut(s) | 616, 857 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 461 |
| Ama87I | CYCGRG | 1 cut(s) | 782 |
| AoxI | GGCC | 9 cut(s) | 6, 94, 108, 195, 271, 586, 1056, 1410, 1422 |
| ApaI | GGGCCC | 2 cut(s) | 590, 1060 |
| ApeKI | GCWGC | 6 cut(s) | 281, 458, 1034, 1220, 1298, 1517 |
| ApoI | RAATTY | 4 cut(s) | 513, 541, 1236, 1580 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1572, 1604 |
| AseI | ATTAAT | 1 cut(s) | 1040 |
| AspLEI | GCGC | 3 cut(s) | 174, 260, 1134 |
| AspS9I | GGNCC | 5 cut(s) | 586, 587, 1056, 1057, 1423 |
| AsuHPI | GGTGA | 4 cut(s) | 419, 967, 1163, 1199 |
| AsuII | TTCGAA | 1 cut(s) | 1380 |
| AvaI | CYCGRG | 1 cut(s) | 782 |
| AxyI | CCTNAGG | 1 cut(s) | 675 |
| BaeGI | GKGCMC | 3 cut(s) | 590, 1060, 1231 |
| BalI | TGGCCA | 1 cut(s) | 273 |
| BanI | GGYRCC | 1 cut(s) | 257 |
| BanII | GRGCYC | 2 cut(s) | 590, 1060 |
| BbsI | GAAGAC | 1 cut(s) | 704 |
| BbvI | GCAGC | 6 cut(s) | 268, 470, 1046, 1232, 1310, 1504 |
| BccI | CCATC | 3 cut(s) | 326, 686, 956 |
| BceAI | ACGGC | 1 cut(s) | 278 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 168, 202 |
| BciT130I | CCWGG | 1 cut(s) | 855 |
| BclI | TGATCA | 1 cut(s) | 487 |
| BcoDI | GTCTC | 6 cut(s) | 129, 163, 190, 196, 785, 1260 |
| BfaI | CTAG | 3 cut(s) | 1427, 1619, 1662 |
| BfmI | CTRYAG | 1 cut(s) | 1518 |
| BfoI | RGCGCY | 1 cut(s) | 261 |
| BfrI | CTTAAG | 1 cut(s) | 431 |
| BfuAI | ACCTGC | 1 cut(s) | 439 |
| BisI | GCNGC | 7 cut(s) | 94, 282, 459, 1035, 1221, 1299, 1518 |
| BlsI | GCNGC | 7 cut(s) | 95, 283, 460, 1036, 1222, 1300, 1519 |
| Bme1390I | CCNGG | 1 cut(s) | 855 |
| BmeT110I | CYCGRG | 1 cut(s) | 782 |
| BmgT120I | GGNCC | 5 cut(s) | 586, 587, 1056, 1057, 1423 |
| BmiI | GGNNCC | 6 cut(s) | 259, 588, 1008, 1058, 1059, 1167 |
| BmrFI | CCNGG | 1 cut(s) | 855 |
| BmrI | ACTGGG | 2 cut(s) | 1565, 1661 |
| BmuI | ACTGGG | 2 cut(s) | 1565, 1661 |
| BpiI | GAAGAC | 1 cut(s) | 704 |
| BpmI | CTGGAG | 1 cut(s) | 948 |
| Bpu14I | TTCGAA | 1 cut(s) | 1380 |
| BpuEI | CTTGAG | 2 cut(s) | 1043, 1332 |
| BsaAI | YACGTR | 1 cut(s) | 1565 |
| BsaHI | GRCGYC | 2 cut(s) | 258, 264 |
| BsaI | GGTCTC | 3 cut(s) | 196, 785, 1260 |
| BsaJI | CCNNGG | 3 cut(s) | 274, 1002, 1231 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 16, 46, 321, 351 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 103, 595, 730, 872, 1478 |
| Bse118I | RCCGGY | 1 cut(s) | 260 |
| Bse1I | ACTGG | 8 cut(s) | 658, 931, 971, 1054, 1224, 1560, 1667, 1679 |
| Bse21I | CCTNAGG | 1 cut(s) | 675 |
| BseBI | CCWGG | 1 cut(s) | 855 |
| BseDI | CCNNGG | 3 cut(s) | 274, 1002, 1231 |
| BseGI | GGATG | 7 cut(s) | 203, 368, 408, 967, 1290, 1312, 1597 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 103, 595, 730, 872, 1478 |
| BseMII | CTCAG | 3 cut(s) | 112, 142, 899 |
| BseNI | ACTGG | 8 cut(s) | 658, 931, 971, 1054, 1224, 1560, 1667, 1679 |
| BseSI | GKGCMC | 3 cut(s) | 590, 1060, 1231 |
| BseXI | GCAGC | 6 cut(s) | 268, 470, 1046, 1232, 1310, 1504 |
| BseYI | CCCAGC | 1 cut(s) | 461 |
| BsgI | GTGCAG | 1 cut(s) | 789 |
| BshFI | GGCC | 9 cut(s) | 8, 96, 110, 197, 273, 588, 1058, 1412, 1424 |
| BshNI | GGYRCC | 1 cut(s) | 257 |
| BsiHKCI | CYCGRG | 1 cut(s) | 782 |
| BsiSI | CCGG | 1 cut(s) | 261 |
| BslFI | GGGAC | 2 cut(s) | 1461, 1573 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 103, 595, 730, 872, 1478 |
| BsmAI | GTCTC | 6 cut(s) | 129, 163, 190, 196, 785, 1260 |
| BsmBI | CGTCTC | 2 cut(s) | 129, 190 |
| BsmFI | GGGAC | 2 cut(s) | 1461, 1573 |
| BsnI | GGCC | 9 cut(s) | 8, 96, 110, 197, 273, 588, 1058, 1412, 1424 |
| Bso31I | GGTCTC | 3 cut(s) | 196, 785, 1260 |
| BsoBI | CYCGRG | 1 cut(s) | 782 |
| Bsp119I | TTCGAA | 1 cut(s) | 1380 |
| Bsp120I | GGGCCC | 2 cut(s) | 586, 1056 |
| Bsp1286I | GDGCHC | 3 cut(s) | 590, 1060, 1231 |
| Bsp143I | GATC | 6 cut(s) | 47, 487, 608, 841, 862, 945 |
| Bsp19I | CCATGG | 1 cut(s) | 274 |
| BspACI | CCGC | 5 cut(s) | 85, 93, 207, 590, 1296 |
| BspANI | GGCC | 9 cut(s) | 8, 96, 110, 197, 273, 588, 1058, 1412, 1424 |
| BspCNI | CTCAG | 3 cut(s) | 111, 141, 898 |
| BspLI | GGNNCC | 6 cut(s) | 259, 588, 1008, 1058, 1059, 1167 |
| BspMAI | CTGCAG | 1 cut(s) | 1522 |
| BspMI | ACCTGC | 1 cut(s) | 439 |
| BspPI | GGATC | 2 cut(s) | 616, 857 |
| BspT104I | TTCGAA | 1 cut(s) | 1380 |
| BspT107I | GGYRCC | 1 cut(s) | 257 |
| BspTI | CTTAAG | 1 cut(s) | 431 |
| BspTNI | GGTCTC | 3 cut(s) | 196, 785, 1260 |
| BsrFI | RCCGGY | 1 cut(s) | 260 |
| BsrI | ACTGG | 8 cut(s) | 658, 931, 971, 1054, 1224, 1560, 1667, 1679 |
| BssAI | RCCGGY | 1 cut(s) | 260 |
| BssECI | CCNNGG | 3 cut(s) | 274, 1002, 1231 |
| BssMI | GATC | 6 cut(s) | 47, 487, 608, 841, 862, 945 |
| BssNAI | GTATAC | 1 cut(s) | 801 |
| BssNI | GRCGYC | 2 cut(s) | 258, 264 |
| BssT1I | CCWWGG | 3 cut(s) | 274, 1002, 1231 |
| Bst1107I | GTATAC | 1 cut(s) | 801 |
| Bst2UI | CCWGG | 1 cut(s) | 855 |
| Bst4CI | ACNGT | 2 cut(s) | 184, 703 |
| Bst6I | CTCTTC | 1 cut(s) | 1258 |
| BstACI | GRCGYC | 2 cut(s) | 258, 264 |
| BstAFI | CTTAAG | 1 cut(s) | 431 |
| BstAPI | GCANNNNNTGC | 5 cut(s) | 598, 1043, 1226, 1544, 1592 |
| BstBAI | YACGTR | 1 cut(s) | 1565 |
| BstBI | TTCGAA | 1 cut(s) | 1380 |
| BstC8I | GCNNGC | 5 cut(s) | 6, 262, 590, 1136, 1212 |
| BstDEI | CTNAG | 5 cut(s) | 98, 128, 675, 885, 1455 |
| BstDSI | CCRYGG | 1 cut(s) | 274 |
| BstF5I | GGATG | 7 cut(s) | 203, 368, 408, 967, 1290, 1312, 1597 |
| BstH2I | RGCGCY | 1 cut(s) | 261 |
| BstHHI | GCGC | 3 cut(s) | 174, 260, 1134 |
| BstKTI | GATC | 6 cut(s) | 50, 490, 611, 844, 865, 948 |
| BstMAI | GTCTC | 6 cut(s) | 129, 163, 190, 196, 785, 1260 |
| BstMBI | GATC | 6 cut(s) | 47, 487, 608, 841, 862, 945 |
| BstNI | CCWGG | 1 cut(s) | 855 |
| BstNSI | RCATGY | 5 cut(s) | 351, 1138, 1305, 1517, 1658 |
| BstSCI | CCNGG | 1 cut(s) | 853 |
| BstSFI | CTRYAG | 1 cut(s) | 1518 |
| BstSLI | GKGCMC | 3 cut(s) | 590, 1060, 1231 |
| BstV1I | GCAGC | 6 cut(s) | 268, 470, 1046, 1232, 1310, 1504 |
| BstV2I | GAAGAC | 1 cut(s) | 704 |
| BstX2I | RGATCY | 1 cut(s) | 608 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1505 |
| BstYI | RGATCY | 1 cut(s) | 608 |
| BstZ17I | GTATAC | 1 cut(s) | 801 |
| Bsu36I | CCTNAGG | 1 cut(s) | 675 |
| BsuRI | GGCC | 9 cut(s) | 8, 96, 110, 197, 273, 588, 1058, 1412, 1424 |
| BtgI | CCRYGG | 1 cut(s) | 274 |
| BtgZI | GCGATG | 1 cut(s) | 631 |
| BtsCI | GGATG | 7 cut(s) | 203, 368, 408, 967, 1290, 1312, 1597 |
| BtsI | GCAGTG | 1 cut(s) | 396 |
| BtsIMutI | CAGTG | 6 cut(s) | 396, 651, 796, 1231, 1248, 1553 |
| BveI | ACCTGC | 1 cut(s) | 439 |
| Cac8I | GCNNGC | 5 cut(s) | 6, 262, 590, 1136, 1212 |
| CaiI | CAGNNNCTG | 1 cut(s) | 461 |
| CfoI | GCGC | 3 cut(s) | 174, 260, 1134 |
| Cfr10I | RCCGGY | 1 cut(s) | 260 |
| Cfr13I | GGNCC | 5 cut(s) | 586, 587, 1056, 1057, 1423 |
| CseI | GACGC | 1 cut(s) | 253 |
| Csp6I | GTAC | 3 cut(s) | 152, 576, 1274 |
| CviQI | GTAC | 3 cut(s) | 152, 576, 1274 |
| DdeI | CTNAG | 5 cut(s) | 98, 128, 675, 885, 1455 |
| DinI | GGCGCC | 1 cut(s) | 259 |
| DpnI | GATC | 6 cut(s) | 49, 489, 610, 843, 864, 947 |
| DpnII | GATC | 6 cut(s) | 47, 487, 608, 841, 862, 945 |
| DraIII | CACNNNGTG | 1 cut(s) | 1109 |
| EaeI | YGGCCR | 1 cut(s) | 271 |
| Eam1104I | CTCTTC | 1 cut(s) | 1258 |
| EarI | CTCTTC | 1 cut(s) | 1258 |
| Eco130I | CCWWGG | 3 cut(s) | 274, 1002, 1231 |
| Eco147I | AGGCCT | 2 cut(s) | 8, 110 |
| Eco24I | GRGCYC | 2 cut(s) | 590, 1060 |
| Eco31I | GGTCTC | 3 cut(s) | 196, 785, 1260 |
| Eco32I | GATATC | 1 cut(s) | 1576 |
| Eco57I | CTGAAG | 2 cut(s) | 398, 1632 |
| Eco81I | CCTNAGG | 1 cut(s) | 675 |
| Eco88I | CYCGRG | 1 cut(s) | 782 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1056, 1057, 1423 |
| EcoRI | GAATTC | 1 cut(s) | 541 |
| EcoRII | CCWGG | 1 cut(s) | 853 |
| EcoRV | GATATC | 1 cut(s) | 1576 |
| EcoT14I | CCWWGG | 3 cut(s) | 274, 1002, 1231 |
| EcoT38I | GRGCYC | 2 cut(s) | 590, 1060 |
| EgeI | GGCGCC | 1 cut(s) | 259 |
| EheI | GGCGCC | 1 cut(s) | 259 |
| ErhI | CCWWGG | 3 cut(s) | 274, 1002, 1231 |
| Esp3I | CGTCTC | 2 cut(s) | 129, 190 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1005, 1037 |
| FaqI | GGGAC | 2 cut(s) | 1461, 1573 |
| FauI | CCCGC | 2 cut(s) | 597, 1303 |
| FbaI | TGATCA | 1 cut(s) | 487 |
| FblI | GTMKAC | 1 cut(s) | 800 |
| Fnu4HI | GCNGC | 7 cut(s) | 94, 282, 459, 1035, 1221, 1299, 1518 |
| FokI | GGATG | 7 cut(s) | 190, 375, 415, 974, 1277, 1299, 1584 |
| FriOI | GRGCYC | 2 cut(s) | 590, 1060 |
| Fsp4HI | GCNGC | 7 cut(s) | 94, 282, 459, 1035, 1221, 1299, 1518 |
| FspBI | CTAG | 3 cut(s) | 1427, 1619, 1662 |
| GlaI | GCGC | 3 cut(s) | 173, 259, 1133 |
| GluI | GCNGC | 7 cut(s) | 94, 282, 459, 1035, 1221, 1299, 1518 |
| GsaI | CCCAGC | 1 cut(s) | 465 |
| GsuI | CTGGAG | 1 cut(s) | 948 |
| HaeII | RGCGCY | 1 cut(s) | 261 |
| HaeIII | GGCC | 9 cut(s) | 8, 96, 110, 197, 273, 588, 1058, 1412, 1424 |
| HapII | CCGG | 1 cut(s) | 261 |
| HgaI | GACGC | 1 cut(s) | 253 |
| HhaI | GCGC | 3 cut(s) | 174, 260, 1134 |
| Hin1I | GRCGYC | 2 cut(s) | 258, 264 |
| Hin6I | GCGC | 3 cut(s) | 172, 258, 1132 |
| HinP1I | GCGC | 3 cut(s) | 172, 258, 1132 |
| HincII | GTYRAC | 1 cut(s) | 355 |
| HindII | GTYRAC | 1 cut(s) | 355 |
| HindIII | AAGCTT | 1 cut(s) | 834 |
| HinfI | GANTC | 4 cut(s) | 140, 156, 1377, 1494 |
| HpaI | GTTAAC | 1 cut(s) | 355 |
| HpaII | CCGG | 1 cut(s) | 261 |
| HphI | GGTGA | 4 cut(s) | 419, 967, 1163, 1199 |
| Hpy166II | GTNNAC | 3 cut(s) | 355, 801, 1676 |
| Hpy188I | TCNGA | 9 cut(s) | 101, 139, 309, 402, 417, 616, 888, 1334, 1612 |
| Hpy188III | TCNNGA | 7 cut(s) | 298, 743, 782, 866, 1022, 1316, 1571 |
| Hpy8I | GTNNAC | 3 cut(s) | 355, 801, 1676 |
| Hpy99I | CGWCG | 3 cut(s) | 62, 269, 299 |
| HpyAV | CCTTC | 6 cut(s) | 96, 121, 295, 320, 1047, 1433 |
| HpyCH4III | ACNGT | 2 cut(s) | 184, 703 |
| HpyCH4IV | ACGT | 3 cut(s) | 57, 1108, 1564 |
| HpyF3I | CTNAG | 5 cut(s) | 98, 128, 675, 885, 1455 |
| HpySE526I | ACGT | 3 cut(s) | 57, 1108, 1564 |
| Hsp92I | GRCGYC | 2 cut(s) | 258, 264 |
| HspAI | GCGC | 3 cut(s) | 172, 258, 1132 |
| KasI | GGCGCC | 1 cut(s) | 257 |
| KroI | GCCGGC | 1 cut(s) | 260 |
| KroNI | GCCGGC | 1 cut(s) | 262 |
| Ksp22I | TGATCA | 1 cut(s) | 487 |
| KspAI | GTTAAC | 1 cut(s) | 355 |
| Kzo9I | GATC | 6 cut(s) | 47, 487, 608, 841, 862, 945 |
| LmnI | GCTCC | 1 cut(s) | 169 |
| Lsp1109I | GCAGC | 6 cut(s) | 268, 470, 1046, 1232, 1310, 1504 |
| MaeI | CTAG | 3 cut(s) | 1427, 1619, 1662 |
| MaeII | ACGT | 3 cut(s) | 57, 1108, 1564 |
| MaeIII | GTNAC | 7 cut(s) | 625, 770, 820, 973, 1099, 1255, 1509 |
| MalI | GATC | 6 cut(s) | 49, 489, 610, 843, 864, 947 |
| MboI | GATC | 6 cut(s) | 47, 487, 608, 841, 862, 945 |
| MboII | GAAGA | 4 cut(s) | 603, 709, 955, 1275 |
| MflI | RGATCY | 1 cut(s) | 608 |
| MhlI | GDGCHC | 3 cut(s) | 590, 1060, 1231 |
| MlsI | TGGCCA | 1 cut(s) | 273 |
| MluNI | TGGCCA | 1 cut(s) | 273 |
| Mly113I | GGCGCC | 1 cut(s) | 258 |
| MlyI | GAGTC | 2 cut(s) | 165, 1503 |
| MmeI | TCCRAC | 4 cut(s) | 380, 742, 1312, 1625 |
| Mox20I | TGGCCA | 1 cut(s) | 273 |
| MreI | CGCCGGCG | 1 cut(s) | 260 |
| MroNI | GCCGGC | 1 cut(s) | 260 |
| MscI | TGGCCA | 1 cut(s) | 273 |
| MseI | TTAA | 5 cut(s) | 354, 432, 1040, 1286, 1647 |
| Msp20I | TGGCCA | 1 cut(s) | 273 |
| MspA1I | CMGCKG | 1 cut(s) | 461 |
| MspCI | CTTAAG | 1 cut(s) | 431 |
| MspI | CCGG | 1 cut(s) | 261 |
| MspR9I | CCNGG | 1 cut(s) | 855 |
| MvaI | CCWGG | 1 cut(s) | 855 |
| NaeI | GCCGGC | 1 cut(s) | 262 |
| NarI | GGCGCC | 1 cut(s) | 258 |
| NcoI | CCATGG | 1 cut(s) | 274 |
| NdeII | GATC | 6 cut(s) | 47, 487, 608, 841, 862, 945 |
| NgoMIV | GCCGGC | 1 cut(s) | 260 |
| NlaIV | GGNNCC | 6 cut(s) | 259, 588, 1008, 1058, 1059, 1167 |
| NmeAIII | GCCGAG | 1 cut(s) | 173 |
| NmuCI | GTSAC | 2 cut(s) | 973, 1255 |
| NspI | RCATGY | 5 cut(s) | 351, 1138, 1305, 1517, 1658 |
| NspV | TTCGAA | 1 cut(s) | 1380 |
| PaeI | GCATGC | 1 cut(s) | 1138 |
| PaeR7I | CTCGAG | 1 cut(s) | 782 |
| PceI | AGGCCT | 2 cut(s) | 8, 110 |
| PciI | ACATGT | 1 cut(s) | 347 |
| PdiI | GCCGGC | 1 cut(s) | 262 |
| PfeI | GAWTC | 2 cut(s) | 140, 1377 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 872 |
| PkrI | GCNGC | 7 cut(s) | 95, 283, 460, 1036, 1222, 1300, 1519 |
| PleI | GAGTC | 2 cut(s) | 164, 1502 |
| PluTI | GGCGCC | 1 cut(s) | 261 |
| PpsI | GAGTC | 2 cut(s) | 164, 1502 |
| Ppu21I | YACGTR | 1 cut(s) | 1565 |
| PscI | ACATGT | 1 cut(s) | 347 |
| PshBI | ATTAAT | 1 cut(s) | 1040 |
| Psp6I | CCWGG | 1 cut(s) | 853 |
| PspFI | CCCAGC | 1 cut(s) | 461 |
| PspGI | CCWGG | 1 cut(s) | 853 |
| PspN4I | GGNNCC | 6 cut(s) | 259, 588, 1008, 1058, 1059, 1167 |
| PspOMI | GGGCCC | 2 cut(s) | 586, 1056 |
| PspPI | GGNCC | 5 cut(s) | 586, 587, 1056, 1057, 1423 |
| PstI | CTGCAG | 1 cut(s) | 1522 |
| PstNI | CAGNNNCTG | 1 cut(s) | 461 |
| PsuI | RGATCY | 1 cut(s) | 608 |
| PvuII | CAGCTG | 1 cut(s) | 461 |
| RsaI | GTAC | 3 cut(s) | 153, 577, 1275 |
| RsaNI | GTAC | 3 cut(s) | 152, 576, 1274 |
| SaqAI | TTAA | 5 cut(s) | 354, 432, 1040, 1286, 1647 |
| SatI | GCNGC | 7 cut(s) | 94, 282, 459, 1035, 1221, 1299, 1518 |
| Sau3AI | GATC | 6 cut(s) | 47, 487, 608, 841, 862, 945 |
| Sau96I | GGNCC | 5 cut(s) | 586, 587, 1056, 1057, 1423 |
| SchI | GAGTC | 2 cut(s) | 165, 1503 |
| ScrFI | CCNGG | 1 cut(s) | 855 |
| SduI | GDGCHC | 3 cut(s) | 590, 1060, 1231 |
| SfcI | CTRYAG | 1 cut(s) | 1518 |
| SfoI | GGCGCC | 1 cut(s) | 259 |
| Sfr274I | CTCGAG | 1 cut(s) | 782 |
| SfuI | TTCGAA | 1 cut(s) | 1380 |
| SgrAI | CRCCGGYG | 1 cut(s) | 260 |
| SlaI | CTCGAG | 1 cut(s) | 782 |
| SmlI | CTYRAG | 4 cut(s) | 431, 782, 1022, 1347 |
| SmoI | CTYRAG | 4 cut(s) | 431, 782, 1022, 1347 |
| SphI | GCATGC | 1 cut(s) | 1138 |
| SseBI | AGGCCT | 2 cut(s) | 8, 110 |
| SsiI | CCGC | 5 cut(s) | 85, 93, 207, 590, 1296 |
| SspDI | GGCGCC | 1 cut(s) | 257 |
| SspI | AATATT | 1 cut(s) | 1090 |
| SspMI | CTAG | 3 cut(s) | 1427, 1619, 1662 |
| StuI | AGGCCT | 2 cut(s) | 8, 110 |
| StyD4I | CCNGG | 1 cut(s) | 853 |
| StyI | CCWWGG | 3 cut(s) | 274, 1002, 1231 |
| TaaI | ACNGT | 2 cut(s) | 184, 703 |
| TaiI | ACGT | 3 cut(s) | 60, 1111, 1567 |
| TaqI | TCGA | 6 cut(s) | 234, 297, 690, 783, 941, 1380 |
| TaqII | GACCGA | 1 cut(s) | 178 |
| TatI | WGTACW | 1 cut(s) | 1273 |
| TauI | GCSGC | 1 cut(s) | 96 |
| TfiI | GAWTC | 2 cut(s) | 140, 1377 |
| Tru1I | TTAA | 5 cut(s) | 354, 432, 1040, 1286, 1647 |
| Tru9I | TTAA | 5 cut(s) | 354, 432, 1040, 1286, 1647 |
| TscAI | CASTG | 6 cut(s) | 396, 658, 796, 1231, 1248, 1560 |
| TseFI | GTSAC | 2 cut(s) | 973, 1255 |
| TseI | GCWGC | 6 cut(s) | 281, 458, 1034, 1220, 1298, 1517 |
| Tsp45I | GTSAC | 2 cut(s) | 973, 1255 |
| TspDTI | ATGAA | 5 cut(s) | 435, 554, 1452, 1548, 1638 |
| TspGWI | ACGGA | 2 cut(s) | 360, 1494 |
| TspRI | CASTG | 6 cut(s) | 396, 658, 796, 1231, 1248, 1560 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 872 |
| Vha464I | CTTAAG | 1 cut(s) | 431 |
| VspI | ATTAAT | 1 cut(s) | 1040 |
| XapI | RAATTY | 4 cut(s) | 513, 541, 1236, 1580 |
| XceI | RCATGY | 5 cut(s) | 351, 1138, 1305, 1517, 1658 |
| XhoI | CTCGAG | 1 cut(s) | 782 |
| XmiI | GTMKAC | 1 cut(s) | 800 |
| XspI | CTAG | 3 cut(s) | 1427, 1619, 1662 |