Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0012783

Physical Location & Seq

Genomic Coordinates Forward (+)

27277993 .. 27281221

Gene Structure 3229 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g25550.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2028 bp

ATGAAGAAGGCATTTCGAGGAGGAGTCTCGGGTTTATGGTCAGTTTGGCTATGTGGGTTTGCGTTGATTGGTTTCTCCTTCTATGCCACTCAGAGGCTACCTTCCCTCAAGGATCAGATCACGAGGTCAACTTCCAGTCAACGAGTTGCCGGCGTTTCAGAGCCGCCGAGAATTATTATATTCTCGGCGCCGAGGCCGTTTAGTGGTTCTGTTGGGGTTAGGCAGAGTTTGGCTCTTCGTTCATGGCTAGCTTTGTCACCGGAGATTAGAGTTGTGCTGTTCAGCAAAGACCCTTCTGTTGTTTCTTTCGCCGGAGGGCTTGGTTCTCGGGTTGTGGTGGATCGCAGCATTGATTTCACGTTCCTCGGTACCCCATTTTTTCATTCGATGATGGCAAGAACATGGTCTTTTTCACCAGACATATCTGTTCTGGTTGATCCAGAAACAATTGTTTTACCTGACTTCATTTCCACCCTGAATTATGCTTACAATCTTGATGATGATTGGCTTCTAGTTGCTTCATCACAAAATGTGTCCTACTTCCCATTCTACTTGGATGAGGATGGAAAGCATTGGCAAAGGAAGGATGGCAAATCGATCAGAACACATAAGTTGCAGGAGATAATCCGTCAGAGTTGGCAGCGAACTCCCTGTGAACAGAAACTGCTTATGGCATGGAATAGTGGAGATCTTGCCCTATATTCTGGAGTCCTTCCTCCTTTTTTGTATGGTAGGGGGGTGCACAATAGTTGGGTCACTAATGAGGCCTTGTCATCGGAGCTCAGGTTTGTGTTTGATGCCAGTTGGACAATCTCAAGCTTATATTTGATTGGTGAGGGGCATCTGAATAACTGGACTGTTGGAGCTTCCAATGCTTCCATTTTTGAAAGAAGAAACTGGGAATATGCCGGAAACTTTCATCTTGGTGCATTATATGGGTCATTGTCTCATCATGAAACTAATTACTCTAGCCTAGTTAAACTTTTGAAATGTGATGGCCAATATAGTTTTGTTAACAAAACCGGAAACATTTGTTCATCTGCATATCGACGTGCTGGCTTGGGTTCCCGGTGGAAGAAGAAAAGTTTGGCTTTGGTTGAGGGTGTCAAATCACAAGGCCATTTATTAGATTGCACTCCCATGGTTCCCACAACGAGTTCAGAACCATTTGACTATCCATTTTCTTTGGAGACACTTCTAGAATTAAACGCAGACAAAAATAAGACAATTGTGCTTGCTGCTGCTGGATATAGTTACAAGGACATGCTAATGAGCTGGGTGTGTCGAATGCGCCACCTACAGATCACAAATTTTATCATTTGTGCCCTCGACCAGGAGATCTACGAATTCTCTGTCTTGATGGGCCTGCCTGTGTTCCGGGATCCAGTTGCTCCGAGTGAGATAAGCTTCAATGATTGCCACTTCGGAACAAAATGTTTTCAGAAGGTGACCAAAGTGAAGTCCAGAATGGTTCTAAAGATACTGAAGATGGGTTACAGTGTACTGCTTAGTGATGTGGATGTATATTGGTTTGAAAATCCATTGGCATTGCTCTCGTCTTTTGGTCCTGCTGTTCTTGCAGCTCAGTCGGATGAATTCAACAAAACAGGACCAATCAACTTACCTAGACGCTTGAACTCTGGCTTCTACTTTGCCCGTTCAGATAGTGCAACAATTGCTGCTATGAAGAAGGTGGTGGCACATGCAGCAAGTTCGGGTCTATCTGAACAGCCAAGCTTCTATGACACACTATGTGGAGAAGGGGGCTCCTATCGTGTGGGTAACAATAGATGCTTAGAACCTGAAACAAACCTGACTGTCCATTTCTTGGATAGAGATCTCTTCCCAAACGGGGCATATCTAGGCCTTTGGCAGAGAAAAAATGTGAGAGCAGCCTGTGTGAAACAGGGATGTTTGGTACTCCATAACAATTGGATCAGTGGGAGGCTGAAGAAGCTAGAAAGACAGGTATTATCTGGCCTATGGGACTTTGATACTAGCACAAGGATGTGTCAGGCACAACTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006464 GO:0006486 GO:0006807 GO:0008150 GO:0008152 GO:0008194 GO:0008378 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009987 GO:0012505 GO:0016740 GO:0016757 GO:0016758 GO:0019538 GO:0034645 GO:0035250 GO:0036211 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0070085 GO:0071554 GO:0071704 GO:0071840 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4228 Nucleotid_trans PNISR

Protein Analysis

676

Amino Acids

75.69

Weight (kDa)

8.94

Isoelectric Point (pI)

41.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Nucleotid_trans	PF03407	435 - 655	8.3e-47	Nucleotide-diphospho-sugar transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012783)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G70630 AT1G70630 AT1G70630 AT1G70630 AT1G70630 AT1G70630 AT1G70630
fragaria_vesca	FvH4_4g25550
malus_domestica	MD13G1101600.v1.1
prunus_persica	Prupe.1G244200_v2.0.a1
pyrus_communis	pycom13g08870 pycom16g08670
rosa_chinensis	RchiOBHm_Chr4g0432961
rosa_laevigata	RLG00000006798
rosa_samantha	Rh4AG318200 Rh4BG326300 Rh4CG341600 Rh4DG321500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	368
AccB1I	GGYRCC	2 cut(s)	187, 368
AccB7I	CCANNNNNTGG	1 cut(s)	1828
AciI	CCGC	1 cut(s)	164
AclWI	GGATC	6 cut(s)	120, 348, 431, 1376, 1389, 1943
AcoI	YGGCCR	1 cut(s)	997
AcsI	RAATTY	3 cut(s)	1309, 1346, 1595
AcuI	CTGAAG	2 cut(s)	1505, 1970
AcyI	GRCGYC	1 cut(s)	188
AdeI	CACNNNGTG	1 cut(s)	1754
AfaI	GTAC	3 cut(s)	370, 1503, 1920
AfiI	CCNNNNNNNGG	5 cut(s)	93, 203, 1333, 1828, 1852
AgsI	TTSAA	6 cut(s)	887, 988, 1411, 1535, 1600, 1636
AjiI	CACGTC	1 cut(s)	1052
AjnI	CCWGG	1 cut(s)	1332
AjuI	GAANNNNNNNTTGG	2 cut(s)	1070, 1102
AleI	CACNNNNGTG	1 cut(s)	2023
AluBI	AGCT	9 cut(s)	251, 781, 819, 866, 1275, 1407, 1583, 1737, 1957
AluI	AGCT	9 cut(s)	251, 781, 819, 866, 1275, 1407, 1583, 1737, 1957
Alw21I	GWGCWC	2 cut(s)	744, 783
Alw26I	GTCTC	3 cut(s)	31, 951, 1184
Alw44I	GTGCAC	1 cut(s)	740
AlwI	GGATC	6 cut(s)	120, 348, 431, 1376, 1389, 1943
AlwNI	CAGNNNCTG	1 cut(s)	664
Ama87I	CYCGRG	2 cut(s)	28, 327
AoxI	GGCC	7 cut(s)	194, 765, 997, 1117, 1363, 1864, 1978
ApaLI	GTGCAC	1 cut(s)	740
ApeKI	GCWGC	8 cut(s)	345, 640, 1238, 1241, 1580, 1679, 1706, 1892
ApoI	RAATTY	3 cut(s)	1309, 1346, 1595
ArsI	GACNNNNNNTTYG	2 cut(s)	1338, 1370
Asp718I	GGTACC	1 cut(s)	368
AspLEI	GCGC	2 cut(s)	190, 1293
AspS9I	GGNCC	3 cut(s)	1363, 1565, 1610
AsuC2I	CCSGG	2 cut(s)	1069, 1379
AsuHPI	GGTGA	4 cut(s)	249, 405, 845, 1459
AsuNHI	GCTAGC	1 cut(s)	247
AvaI	CYCGRG	2 cut(s)	28, 327
AvaII	GGWCC	2 cut(s)	1565, 1610
BaeGI	GKGCMC	2 cut(s)	744, 1327
BalI	TGGCCA	1 cut(s)	999
BamHI	GGATCC	1 cut(s)	1381
BanI	GGYRCC	2 cut(s)	187, 368
BanII	GRGCYC	2 cut(s)	783, 1769
BarI	GAAGNNNNNNTAC	2 cut(s)	1478, 1510
BauI	CACGAG	1 cut(s)	121
Bbv12I	GWGCWC	2 cut(s)	744, 783
BbvI	GCAGC	8 cut(s)	357, 652, 1225, 1228, 1592, 1666, 1718, 1904
BccI	CCATC	6 cut(s)	385, 557, 581, 989, 1354, 1483
BceAI	ACGGC	1 cut(s)	181
BcgI	CGANNNNNNTGC	6 cut(s)	1536, 1569, 1570, 1603, 1695, 1729
BciT130I	CCWGG	1 cut(s)	1334
BcnI	CCSGG	2 cut(s)	1069, 1379
BcoDI	GTCTC	3 cut(s)	31, 951, 1184
BfaI	CTAG	9 cut(s)	248, 512, 969, 974, 1199, 1626, 1862, 1958, 1998
BfmI	CTRYAG	1 cut(s)	1298
BfoI	RGCGCY	1 cut(s)	191
BglII	AGATCT	3 cut(s)	688, 1338, 1837
BisI	GCNGC	9 cut(s)	164, 346, 641, 1239, 1242, 1581, 1680, 1707, 1893
BlsI	GCNGC	9 cut(s)	165, 347, 642, 1240, 1243, 1582, 1681, 1708, 1894
Bme1390I	CCNGG	3 cut(s)	1069, 1334, 1379
Bme18I	GGWCC	2 cut(s)	1565, 1610
BmeT110I	CYCGRG	2 cut(s)	28, 327
BmgBI	CACGTC	1 cut(s)	1052
BmgT120I	GGNCC	3 cut(s)	1363, 1565, 1610
BmiI	GGNNCC	6 cut(s)	189, 370, 1066, 1146, 1383, 1768
BmrFI	CCNGG	3 cut(s)	1069, 1334, 1379
BmrI	ACTGGG	1 cut(s)	907
BmsI	GCATC	3 cut(s)	787, 850, 1781
BmtI	GCTAGC	1 cut(s)	251
BmuI	ACTGGG	1 cut(s)	907
BplI	GAGNNNNNCTC	2 cut(s)	217, 249
BpmI	CTGGAG	1 cut(s)	726
Bpu10I	CCTNAGC	1 cut(s)	782
BpuEI	CTTGAG	2 cut(s)	92, 799
BpuMI	CCSGG	2 cut(s)	1069, 1379
Bsa29I	ATCGAT	1 cut(s)	596
BsaBI	GATNNNNATC	1 cut(s)	1836
BsaHI	GRCGYC	1 cut(s)	188
BsaJI	CCNNGG	3 cut(s)	191, 364, 1140
BsaWI	WCCGGW	2 cut(s)	259, 1022
BsaXI	ACNNNNNCTCC	2 cut(s)	770, 800
Bsc4I	CCNNNNNNNGG	5 cut(s)	93, 203, 1333, 1828, 1852
Bse118I	RCCGGY	1 cut(s)	149
Bse1I	ACTGG	5 cut(s)	135, 801, 857, 902, 1385
Bse3DI	GCAATG	1 cut(s)	1547
Bse8I	GATNNNNATC	1 cut(s)	1836
BseBI	CCWGG	1 cut(s)	1334
BseCI	ATCGAT	1 cut(s)	596
BseDI	CCNNGG	3 cut(s)	191, 364, 1140
BseGI	GGATG	7 cut(s)	562, 568, 592, 1525, 1597, 1916, 2013
BseJI	GATNNNNATC	1 cut(s)	1836
BseLI	CCNNNNNNNGG	5 cut(s)	93, 203, 1333, 1828, 1852
BseMI	GCAATG	1 cut(s)	1547
BseMII	CTCAG	3 cut(s)	104, 796, 1598
BseNI	ACTGG	5 cut(s)	135, 801, 857, 902, 1385
BseRI	GAGGAG	2 cut(s)	33, 36
BseSI	GKGCMC	2 cut(s)	744, 1327
BseXI	GCAGC	8 cut(s)	357, 652, 1225, 1228, 1592, 1666, 1718, 1904
BseYI	CCCAGC	1 cut(s)	1275
BshFI	GGCC	7 cut(s)	196, 767, 999, 1119, 1365, 1866, 1980
BshNI	GGYRCC	2 cut(s)	187, 368
BshVI	ATCGAT	1 cut(s)	596
BsiHKAI	GWGCWC	2 cut(s)	744, 783
BsiHKCI	CYCGRG	2 cut(s)	28, 327
BsiSI	CCGG	7 cut(s)	150, 260, 312, 909, 1023, 1069, 1378
BslFI	GGGAC	1 cut(s)	2000
BslI	CCNNNNNNNGG	5 cut(s)	93, 203, 1333, 1828, 1852
BsmAI	GTCTC	3 cut(s)	31, 951, 1184
BsmFI	GGGAC	1 cut(s)	2000
BsmI	GAATGC	1 cut(s)	1293
BsnI	GGCC	7 cut(s)	196, 767, 999, 1119, 1365, 1866, 1980
BsoBI	CYCGRG	2 cut(s)	28, 327
Bsp1286I	GDGCHC	4 cut(s)	744, 783, 1327, 1769
Bsp19I	CCATGG	1 cut(s)	1140
BspACI	CCGC	1 cut(s)	164
BspANI	GGCC	7 cut(s)	196, 767, 999, 1119, 1365, 1866, 1980
BspCNI	CTCAG	3 cut(s)	103, 795, 1597
BspDI	ATCGAT	1 cut(s)	596
BspHI	TCATGA	1 cut(s)	952
BspLI	GGNNCC	6 cut(s)	189, 370, 1066, 1146, 1383, 1768
BspOI	GCTAGC	1 cut(s)	251
BspPI	GGATC	6 cut(s)	120, 348, 431, 1376, 1389, 1943
BspQI	GCTCTTC	1 cut(s)	240
BspT107I	GGYRCC	2 cut(s)	187, 368
BsrDI	GCAATG	1 cut(s)	1547
BsrFI	RCCGGY	1 cut(s)	149
BsrI	ACTGG	5 cut(s)	135, 801, 857, 902, 1385
BssAI	RCCGGY	1 cut(s)	149
BssECI	CCNNGG	3 cut(s)	191, 364, 1140
BssNI	GRCGYC	1 cut(s)	188
BssSI	CACGAG	1 cut(s)	121
BssT1I	CCWWGG	1 cut(s)	1140
Bst2BI	CACGAG	1 cut(s)	121
Bst2UI	CCWGG	1 cut(s)	1334
Bst4CI	ACNGT	4 cut(s)	859, 1499, 1819, 2025
Bst6I	CTCTTC	2 cut(s)	240, 1847
BstACI	GRCGYC	1 cut(s)	188
BstAPI	GCANNNNNTGC	1 cut(s)	1676
BstC8I	GCNNGC	5 cut(s)	151, 249, 1057, 1236, 1367
BstDEI	CTNAG	5 cut(s)	90, 782, 1508, 1584, 1795
BstDSI	CCRYGG	1 cut(s)	1140
BstEII	GGTNACC	1 cut(s)	1447
BstENI	CCTNNNNNAGG	1 cut(s)	1331
BstF5I	GGATG	7 cut(s)	562, 568, 592, 1525, 1597, 1916, 2013
BstH2I	RGCGCY	1 cut(s)	191
BstHHI	GCGC	2 cut(s)	190, 1293
BstMAI	GTCTC	3 cut(s)	31, 951, 1184
BstMWI	GCNNNNNNNGC	5 cut(s)	872, 1577, 1676, 1706, 1954
BstNI	CCWGG	1 cut(s)	1334
BstNSI	RCATGY	2 cut(s)	1267, 1706
BstPI	GGTNACC	1 cut(s)	1447
BstSCI	CCNGG	3 cut(s)	1067, 1332, 1377
BstSFI	CTRYAG	1 cut(s)	1298
BstSLI	GKGCMC	2 cut(s)	744, 1327
BstV1I	GCAGC	8 cut(s)	357, 652, 1225, 1228, 1592, 1666, 1718, 1904
BstX2I	RGATCY	4 cut(s)	688, 1338, 1381, 1837
BstYI	RGATCY	4 cut(s)	688, 1338, 1381, 1837
Bsu15I	ATCGAT	1 cut(s)	596
BsuRI	GGCC	7 cut(s)	196, 767, 999, 1119, 1365, 1866, 1980
BsuTUI	ATCGAT	1 cut(s)	596
BtgI	CCRYGG	1 cut(s)	1140
BtrI	CACGTC	1 cut(s)	1052
BtsCI	GGATG	7 cut(s)	562, 568, 592, 1525, 1597, 1916, 2013
BtsIMutI	CAGTG	2 cut(s)	1504, 1945
Cac8I	GCNNGC	5 cut(s)	151, 249, 1057, 1236, 1367
CaiI	CAGNNNCTG	1 cut(s)	664
CciI	TCATGA	1 cut(s)	952
CfoI	GCGC	2 cut(s)	190, 1293
Cfr10I	RCCGGY	1 cut(s)	149
Cfr13I	GGNCC	3 cut(s)	1363, 1565, 1610
ClaI	ATCGAT	1 cut(s)	596
CseI	GACGC	1 cut(s)	1638
Csp6I	GTAC	3 cut(s)	369, 1502, 1919
CviAII	CATG	7 cut(s)	243, 402, 675, 953, 1141, 1264, 1703
CviQI	GTAC	3 cut(s)	369, 1502, 1919
DdeI	CTNAG	5 cut(s)	90, 782, 1508, 1584, 1795
DinI	GGCGCC	1 cut(s)	189
DraIII	CACNNNGTG	1 cut(s)	1754
EaeI	YGGCCR	1 cut(s)	997
Eam1104I	CTCTTC	2 cut(s)	240, 1847
EarI	CTCTTC	2 cut(s)	240, 1847
Ecl136II	GAGCTC	1 cut(s)	781
Eco130I	CCWWGG	1 cut(s)	1140
Eco147I	AGGCCT	2 cut(s)	767, 1866
Eco24I	GRGCYC	2 cut(s)	783, 1769
Eco47I	GGWCC	2 cut(s)	1565, 1610
Eco53kI	GAGCTC	1 cut(s)	781
Eco57I	CTGAAG	2 cut(s)	1505, 1970
Eco88I	CYCGRG	2 cut(s)	28, 327
Eco91I	GGTNACC	1 cut(s)	1447
EcoICRI	GAGCTC	1 cut(s)	781
EcoNI	CCTNNNNNAGG	1 cut(s)	1331
EcoO65I	GGTNACC	1 cut(s)	1447
EcoRI	GAATTC	2 cut(s)	1346, 1595
EcoRII	CCWGG	1 cut(s)	1332
EcoT14I	CCWWGG	1 cut(s)	1140
EcoT38I	GRGCYC	2 cut(s)	783, 1769
EgeI	GGCGCC	1 cut(s)	189
EheI	GGCGCC	1 cut(s)	189
ErhI	CCWWGG	1 cut(s)	1140
FaeI	CATG	7 cut(s)	246, 405, 678, 956, 1144, 1267, 1706
FalI	AAGNNNNNCTT	2 cut(s)	1075, 1107
FaqI	GGGAC	1 cut(s)	2000
FatI	CATG	7 cut(s)	242, 401, 674, 952, 1140, 1263, 1702
Fnu4HI	GCNGC	9 cut(s)	164, 346, 641, 1239, 1242, 1581, 1680, 1707, 1893
FokI	GGATG	7 cut(s)	569, 575, 599, 1532, 1604, 1923, 2020
FriOI	GRGCYC	2 cut(s)	783, 1769
Fsp4HI	GCNGC	9 cut(s)	164, 346, 641, 1239, 1242, 1581, 1680, 1707, 1893
FspBI	CTAG	9 cut(s)	248, 512, 969, 974, 1199, 1626, 1862, 1958, 1998
GlaI	GCGC	2 cut(s)	189, 1292
GluI	GCNGC	9 cut(s)	164, 346, 641, 1239, 1242, 1581, 1680, 1707, 1893
GsaI	CCCAGC	1 cut(s)	1279
GsuI	CTGGAG	1 cut(s)	726
HaeII	RGCGCY	1 cut(s)	191
HaeIII	GGCC	7 cut(s)	196, 767, 999, 1119, 1365, 1866, 1980
HapII	CCGG	7 cut(s)	150, 260, 312, 909, 1023, 1069, 1378
HgaI	GACGC	1 cut(s)	1638
HhaI	GCGC	2 cut(s)	190, 1293
Hin1I	GRCGYC	1 cut(s)	188
Hin1II	CATG	7 cut(s)	246, 405, 678, 956, 1144, 1267, 1706
Hin6I	GCGC	2 cut(s)	188, 1291
HinP1I	GCGC	2 cut(s)	188, 1291
HincII	GTYRAC	3 cut(s)	129, 140, 1015
HindII	GTYRAC	3 cut(s)	129, 140, 1015
HindIII	AAGCTT	3 cut(s)	817, 1405, 1735
HinfI	GANTC	2 cut(s)	24, 708
HpaI	GTTAAC	1 cut(s)	1015
HpaII	CCGG	7 cut(s)	150, 260, 312, 909, 1023, 1069, 1378
HphI	GGTGA	4 cut(s)	249, 405, 845, 1459
Hpy166II	GTNNAC	6 cut(s)	129, 140, 656, 742, 1015, 1502
Hpy188III	TCNNGA	8 cut(s)	121, 440, 494, 705, 953, 1199, 1357, 1464
Hpy8I	GTNNAC	6 cut(s)	129, 140, 656, 742, 1015, 1502
Hpy99I	CGWCG	1 cut(s)	1053
HpyAV	CCTTC	8 cut(s)	88, 111, 303, 577, 722, 1438, 1684, 1754
HpyCH4III	ACNGT	4 cut(s)	859, 1499, 1819, 2025
HpyCH4IV	ACGT	2 cut(s)	359, 1051
HpyCH4V	TGCA	8 cut(s)	616, 742, 929, 1043, 1134, 1580, 1670, 1706
HpyF10VI	GCNNNNNNNGC	5 cut(s)	872, 1577, 1676, 1706, 1954
HpyF3I	CTNAG	5 cut(s)	90, 782, 1508, 1584, 1795
HpySE526I	ACGT	2 cut(s)	359, 1051
Hsp92I	GRCGYC	1 cut(s)	188
Hsp92II	CATG	7 cut(s)	246, 405, 678, 956, 1144, 1267, 1706
HspAI	GCGC	2 cut(s)	188, 1291
KasI	GGCGCC	1 cut(s)	187
KpnI	GGTACC	1 cut(s)	372
KroI	GCCGGC	1 cut(s)	149
KroNI	GCCGGC	1 cut(s)	151
KspAI	GTTAAC	1 cut(s)	1015
LguI	GCTCTTC	1 cut(s)	240
LmnI	GCTCC	4 cut(s)	778, 863, 1396, 1772
Lsp1109I	GCAGC	8 cut(s)	357, 652, 1225, 1228, 1592, 1666, 1718, 1904
LweI	GCATC	3 cut(s)	787, 850, 1781
MaeI	CTAG	9 cut(s)	248, 512, 969, 974, 1199, 1626, 1862, 1958, 1998
MaeII	ACGT	2 cut(s)	359, 1051
MaeIII	GTNAC	6 cut(s)	255, 754, 1253, 1447, 1493, 1781
MboII	GAAGA	9 cut(s)	16, 227, 903, 1087, 1090, 1498, 1699, 1834, 1963
MfeI	CAATTG	4 cut(s)	447, 1227, 1674, 1930
MflI	RGATCY	4 cut(s)	688, 1338, 1381, 1837
MhlI	GDGCHC	4 cut(s)	744, 783, 1327, 1769
MlsI	TGGCCA	1 cut(s)	999
MluNI	TGGCCA	1 cut(s)	999
Mly113I	GGCGCC	1 cut(s)	188
MlyI	GAGTC	2 cut(s)	33, 717
MmeI	TCCRAC	3 cut(s)	785, 841, 1569
Mox20I	TGGCCA	1 cut(s)	999
MroNI	GCCGGC	1 cut(s)	149
MscI	TGGCCA	1 cut(s)	999
MseI	TTAA	3 cut(s)	978, 1014, 1205
MslI	CAYNNNNRTG	5 cut(s)	924, 1139, 1268, 2006, 2023
Msp20I	TGGCCA	1 cut(s)	999
MspI	CCGG	7 cut(s)	150, 260, 312, 909, 1023, 1069, 1378
MspR9I	CCNGG	3 cut(s)	1069, 1334, 1379
MunI	CAATTG	4 cut(s)	447, 1227, 1674, 1930
Mva1269I	GAATGC	1 cut(s)	1293
MvaI	CCWGG	1 cut(s)	1334
MwoI	GCNNNNNNNGC	5 cut(s)	872, 1577, 1676, 1706, 1954
NaeI	GCCGGC	1 cut(s)	151
NarI	GGCGCC	1 cut(s)	188
NciI	CCSGG	2 cut(s)	1069, 1379
NcoI	CCATGG	1 cut(s)	1140
NgoMIV	GCCGGC	1 cut(s)	149
NheI	GCTAGC	1 cut(s)	247
NlaIII	CATG	7 cut(s)	246, 405, 678, 956, 1144, 1267, 1706
NlaIV	GGNNCC	6 cut(s)	189, 370, 1066, 1146, 1383, 1768
NmeAIII	GCCGAG	3 cut(s)	164, 192, 216
NmuCI	GTSAC	3 cut(s)	255, 754, 1447
NspI	RCATGY	2 cut(s)	1267, 1706
OliI	CACNNNNGTG	1 cut(s)	2023
PagI	TCATGA	1 cut(s)	952
PceI	AGGCCT	2 cut(s)	767, 1866
PciSI	GCTCTTC	1 cut(s)	240
PctI	GAATGC	1 cut(s)	1293
PdiI	GCCGGC	1 cut(s)	151
PflMI	CCANNNNNTGG	1 cut(s)	1828
PfoI	TCCNGGA	1 cut(s)	1377
PkrI	GCNGC	9 cut(s)	165, 347, 642, 1240, 1243, 1582, 1681, 1708, 1894
PleI	GAGTC	2 cut(s)	32, 716
PluTI	GGCGCC	1 cut(s)	191
PpsI	GAGTC	2 cut(s)	32, 716
Psp124BI	GAGCTC	1 cut(s)	783
Psp6I	CCWGG	1 cut(s)	1332
PspEI	GGTNACC	1 cut(s)	1447
PspFI	CCCAGC	1 cut(s)	1275
PspGI	CCWGG	1 cut(s)	1332
PspN4I	GGNNCC	6 cut(s)	189, 370, 1066, 1146, 1383, 1768
PspPI	GGNCC	3 cut(s)	1363, 1565, 1610
PstNI	CAGNNNCTG	1 cut(s)	664
PsuI	RGATCY	4 cut(s)	688, 1338, 1381, 1837
RsaI	GTAC	3 cut(s)	370, 1503, 1920
RsaNI	GTAC	3 cut(s)	369, 1502, 1919
RseI	CAYNNNNRTG	5 cut(s)	924, 1139, 1268, 2006, 2023
SacI	GAGCTC	1 cut(s)	783
SapI	GCTCTTC	1 cut(s)	240
SaqAI	TTAA	3 cut(s)	978, 1014, 1205
SatI	GCNGC	9 cut(s)	164, 346, 641, 1239, 1242, 1581, 1680, 1707, 1893
Sau96I	GGNCC	3 cut(s)	1363, 1565, 1610
SchI	GAGTC	2 cut(s)	33, 717
ScrFI	CCNGG	3 cut(s)	1069, 1334, 1379
SduI	GDGCHC	4 cut(s)	744, 783, 1327, 1769
SfaNI	GCATC	3 cut(s)	787, 850, 1781
SfcI	CTRYAG	1 cut(s)	1298
SfoI	GGCGCC	1 cut(s)	189
SinI	GGWCC	2 cut(s)	1565, 1610
SmiMI	CAYNNNNRTG	5 cut(s)	924, 1139, 1268, 2006, 2023
SmlI	CTYRAG	2 cut(s)	107, 814
SmoI	CTYRAG	2 cut(s)	107, 814
SseBI	AGGCCT	2 cut(s)	767, 1866
SsiI	CCGC	1 cut(s)	164
SspDI	GGCGCC	1 cut(s)	187
SspMI	CTAG	9 cut(s)	248, 512, 969, 974, 1199, 1626, 1862, 1958, 1998
SstI	GAGCTC	1 cut(s)	783
StuI	AGGCCT	2 cut(s)	767, 1866
StyD4I	CCNGG	3 cut(s)	1067, 1332, 1377
StyI	CCWWGG	1 cut(s)	1140
TaaI	ACNGT	4 cut(s)	859, 1499, 1819, 2025
TaiI	ACGT	2 cut(s)	362, 1054
TaqI	TCGA	6 cut(s)	16, 386, 596, 1048, 1285, 1329
TatI	WGTACW	1 cut(s)	1501
TauI	GCSGC	1 cut(s)	166
Tru1I	TTAA	3 cut(s)	978, 1014, 1205
Tru9I	TTAA	3 cut(s)	978, 1014, 1205
TscAI	CASTG	2 cut(s)	1504, 1945
TseFI	GTSAC	3 cut(s)	255, 754, 1447
TseI	GCWGC	8 cut(s)	345, 640, 1238, 1241, 1580, 1679, 1706, 1892
Tsp45I	GTSAC	3 cut(s)	255, 754, 1447
TspGWI	ACGGA	1 cut(s)	617
TspRI	CASTG	2 cut(s)	1504, 1945
Van91I	CCANNNNNTGG	1 cut(s)	1828
VneI	GTGCAC	1 cut(s)	740
VpaK11BI	GGWCC	2 cut(s)	1565, 1610
XagI	CCTNNNNNAGG	1 cut(s)	1331
XapI	RAATTY	3 cut(s)	1309, 1346, 1595
XbaI	TCTAGA	1 cut(s)	1198
XceI	RCATGY	2 cut(s)	1267, 1706
XspI	CTAG	9 cut(s)	248, 512, 969, 974, 1199, 1626, 1862, 1958, 1998

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.