Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0012783

Physical Location & Seq

Genomic Coordinates Forward (+)

57046743 .. 57050841

Gene Structure 4099 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ40153

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2610 bp

ATGAAGGCATTTGGAAGGGGAGGCGCCGGTCTGTGGTCTGTTTGGCTATGTGGGTTTGCGCTGATTGGTCTCTCTTTCTATGCCACTCAGAGGCTACCTTCCATCAAGGATCAGATCATGATGAGTCCCAAGCTCGGTCAACGAGTTGGTGACGTTGCAGAGACGCCGAGGATTATCATATTCTCGGCGCCGAGGTCGTTTAGTGGTCCTGTTGGGGATAGGCAGAGTCTAGCTCTTCGTTCATGGCTAGCTTTGTCACCAGAGATTACGGTTGTGCTGTTCAGCAAAGACCCTTCTGTTGTTTCTTTTGCTCAAGGGTTTGGTTCTCGGGTTGTGGTGGATCCCAACATTGACTTCACGTTCCTCGGTACCCCATTTTTTCATTCGATGATGGCAAGAACATGGTATTTTTCACCAGACATATCTGTTCTGGTTGATCCAGAAACAATTGTTTTACCTGACTTCATTTCCACCCTGAATTATGCTTACAATCTTGATGATGATTGGCTTCTAGTTGCTTCATCACAAAATGTCTCCTACTTCCCATTCTACTTGGATGAGGATGGAAAGCATTGGCGAAGGGAGGATGGCAAATCAATGAGAACACATGAGTTGCAGGAGATAATTGGTCATAGTTGGCAGCAGACCCCCTGCGAACAGAAATTGCTTATGGCTTGGAATAGTGGAGATCTTGCCCTATATTCTGGAGTCCTTCCTCCTTTTTTGTATGGTAGGGGGGTGCACAATAGTTGGGTCATTAATGAGGCCTTGTCATCAGAGCTTAGGTTTGTATTTGATGCCAGTTGGACAATCTCAAGCTTATATCTGATTAGTCAGGAGCATCTGAATAACTGGACTGTTGGAGCTTCCGATGCTTTAATTTTTGAAAGAAGAAGCTGGGAATATGCTGGAAACTCTCATGTTGGAGCATTATATGGATCATTGTCTCATTATGAAACTAATAATTCTAGCTTGATAAAACTTTTGAAATGTGACGGCCAATATATCTTTGTCAACAAAACGGAAAACATTTGTTCGTCTGCATACCGACGTGCTGGCTTGGGTTCCTGGTGGAAGAAGAAAAGTTTGGGTTGGGTTGAGGGTGTTAAATCACAAGGCGAGTTATTAGATTGCACTCCTATGGTTCCCACAAAGCATTCAAAACCATTAGACTATCCATTTTCCTTAGAGACACTTCTACCATTAAATGCAGACAAAAATAAGACAATTGTGCTTGCTGCTGCTGGATATAGTTACAAGGACATGCTAATGAGCTGGGTGTGTAGAATGCACCACCTACAGGTCACAAATTTTATCATTTGTGCCCTCGACCAGGAGATCTACGAGTTCTCTGTCTTGATGGGCCTGCCTGTATTCAGGGATCCAGTTGCACCAAGTGAGATAAGCTTCAATGATTGCCACTTCGGAACAAAATGCTTTCAGAAGGTGACCAAAGTGAAATCCAGAATGGTTTTAAAGATACTAAAGATGGGTTACAACGTACTTCTTAGTGACGTGGATGTGTATTGGTTTGGAAATCCATTGCCATTGCTCTGGTCTTTTGGTCCTGCTGTTCTTGCAGCTCAGTCGGATGAATTCAACAAAACAGGACCAATTAACTTACCTAGGCGCTTGAACTCTGGCTTCTACTTTGCCCGTTCAGATAGTTCGACAATTGCTGCTATGAAGAAGGTCGTGGCACATGCAGCAACTTCGGGTCTATCTGAACAGCCAAGCTTCTATGATACACTATGTGGAGAAGGGGGCTCCAATCGTGTGGGTGCCAATAGATGCTTAGAACCTGAAACAAATCTGACTGTCCATTTCTTGGACAGAGATCTCTTCCCAAATGGGGCATATCTAGAACTATGGCATAGGAAAAATGTGAGAGCAGCCTGTGTGAAGCAGGGATGTTTGGTTATCCATAACAATTGGATCAGTGGGAGGCTGAAGAAGCTAGAAAGACAGATGTTATCTGGCCTATGGGACTTTGATACTAGCACAAGAATGTGGCTAGTTCGGCATACTGAAAGTGAATCTAAGAGAAACAAGCTGCTCGGACGAGATGCCAATCAAGCTCCTGATTCCTTATCGTTGGACTACAGTACACAGTCCAAAAGTATTCTTGTGAGGATAGTTCATGCAGGTGGGCAAGAGGAGCTGTTTCCAAATGCAATTCCTGCATCTCTGCTGATGGACAAATATCCTGGGAAATGTGTTGCCCGCCCAGAAGTTTTCAAAAAGCCTCAGGAGTCCCTCTTAAGGCCAGACGAGAGCCTATTGCCTGGTCAGAAGTATTATATAATACCATGTACAACAGCACAGAAACTTAAGCGTCAACAGCAGAAGAAGGTGAAGGCCAAAGAACGTGCTGAAGATGAAGAGATGATTCTGGATGGAAAGATCACTGTGGATTCGGAAGGGGAAGACACTGATGATTCTATTTGCTCCGCCAGTGACTTCGTCTCCAAGGAAAAGAGACCAAAATCTTCAAGGAGGAGGGGAATTAGAGGAAGAAAGCCGTTTGTACCTCCCCTCCCAAAGGTCAGATCTGGTAGAGGATTTGGATGGGAGCCTAGTCTCACTTCTGTACAAGAAGTGTCTCCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006464 GO:0006486 GO:0006807 GO:0008150 GO:0008152 GO:0008194 GO:0008378 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009987 GO:0012505 GO:0016740 GO:0016757 GO:0016758 GO:0019538 GO:0034645 GO:0035250 GO:0036211 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0070085 GO:0071554 GO:0071704 GO:0071840 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4228 Nucleotid_trans PNISR

Protein Analysis

869

Amino Acids

97.8

Weight (kDa)

8.63

Isoelectric Point (pI)

46.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Nucleotid_trans	PF03407	435 - 655	4.2e-46	Nucleotide-diphospho-sugar transferase
PADRE	PF14009	705 - 866	1.5e-15	PADRE domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012783)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G70630 AT1G70630 AT1G70630 AT1G70630 AT1G70630 AT1G70630 AT1G70630
fragaria_vesca	FvH4_4g25550
malus_domestica	MD13G1101600.v1.1
prunus_persica	Prupe.1G244200_v2.0.a1
pyrus_communis	pycom13g08870 pycom16g08670
rosa_chinensis	RchiOBHm_Chr4g0432961
rosa_laevigata	RLG00000006798
rosa_samantha	Rh4AG318200 Rh4BG326300 Rh4CG341600 Rh4DG321500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2135
Acc36I	ACCTGC	1 cut(s)	2135
Acc65I	GGTACC	1 cut(s)	368
AccB1I	GGYRCC	4 cut(s)	23, 187, 368, 1781
AccB7I	CCANNNNNTGG	1 cut(s)	1828
AciI	CCGC	2 cut(s)	2224, 2451
AclWI	GGATC	8 cut(s)	117, 335, 348, 431, 946, 1376, 1389, 1943
AcoI	YGGCCR	1 cut(s)	997
AcsI	RAATTY	2 cut(s)	1309, 1595
AcuI	CTGAAG	2 cut(s)	1970, 2394
AcyI	GRCGYC	3 cut(s)	24, 164, 188
AdeI	CACNNNGTG	2 cut(s)	1397, 1754
AfaI	GTAC	6 cut(s)	370, 1503, 2107, 2314, 2529, 2592
AfiI	CCNNNNNNNGG	9 cut(s)	33, 90, 134, 1300, 1333, 1828, 1852, 2262, 2542
AflII	CTTAAG	2 cut(s)	2260, 2330
AgsI	TTSAA	8 cut(s)	887, 988, 1161, 1411, 1600, 1636, 2239, 2493
AjiI	CACGTC	2 cut(s)	1052, 1516
AjnI	CCWGG	4 cut(s)	1067, 1332, 2206, 2284
AjuI	GAANNNNNNNTTGG	4 cut(s)	338, 370, 1070, 1102
Alw21I	GWGCWC	1 cut(s)	744
Alw26I	GTCTC	8 cut(s)	74, 155, 538, 951, 1184, 2470, 2473, 2585
Alw44I	GTGCAC	1 cut(s)	740
AlwI	GGATC	8 cut(s)	117, 335, 348, 431, 946, 1376, 1389, 1943
Ama87I	CYCGRG	1 cut(s)	327
AoxI	GGCC	6 cut(s)	765, 997, 1363, 1978, 2264, 2358
ApaLI	GTGCAC	1 cut(s)	740
ApeKI	GCWGC	8 cut(s)	640, 1238, 1241, 1580, 1679, 1706, 1892, 2053
ApoI	RAATTY	2 cut(s)	1309, 1595
AseI	ATTAAT	1 cut(s)	759
Asp718I	GGTACC	1 cut(s)	368
AspA2I	CCTAGG	1 cut(s)	1625
AspLEI	GCGC	4 cut(s)	26, 61, 190, 1632
AspS9I	GGNCC	4 cut(s)	206, 1363, 1565, 1610
AsuHPI	GGTGA	5 cut(s)	161, 249, 405, 1459, 2365
AsuNHI	GCTAGC	1 cut(s)	247
AvaI	CYCGRG	1 cut(s)	327
AvaII	GGWCC	3 cut(s)	206, 1565, 1610
AvrII	CCTAGG	1 cut(s)	1625
AxyI	CCTNAGG	1 cut(s)	2247
BaeGI	GKGCMC	2 cut(s)	744, 1327
BamHI	GGATCC	2 cut(s)	340, 1381
BanI	GGYRCC	4 cut(s)	23, 187, 368, 1781
BanII	GRGCYC	1 cut(s)	1769
BbsI	GAAGAC	1 cut(s)	2433
Bbv12I	GWGCWC	1 cut(s)	744
BbvI	GCAGC	8 cut(s)	652, 1225, 1228, 1592, 1666, 1718, 1904, 2040
BccI	CCATC	9 cut(s)	110, 385, 557, 581, 1354, 1483, 2188, 2390, 2562
BceAI	ACGGC	2 cut(s)	1012, 2506
BcgI	CGANNNNNNTGC	4 cut(s)	1569, 1603, 1695, 1729
BciT130I	CCWGG	4 cut(s)	1069, 1334, 2208, 2286
BcoDI	GTCTC	8 cut(s)	74, 155, 538, 951, 1184, 2470, 2473, 2585
BfmI	CTRYAG	2 cut(s)	1298, 2101
BfoI	RGCGCY	3 cut(s)	27, 191, 1633
BfrI	CTTAAG	2 cut(s)	2260, 2330
BfuAI	ACCTGC	1 cut(s)	2135
BglII	AGATCT	4 cut(s)	688, 1338, 1837, 2549
BisI	GCNGC	8 cut(s)	641, 1239, 1242, 1581, 1680, 1707, 1893, 2054
BlnI	CCTAGG	1 cut(s)	1625
BlsI	GCNGC	8 cut(s)	642, 1240, 1243, 1582, 1681, 1708, 1894, 2055
Bme1390I	CCNGG	4 cut(s)	1069, 1334, 2208, 2286
Bme18I	GGWCC	3 cut(s)	206, 1565, 1610
BmeT110I	CYCGRG	1 cut(s)	327
BmgBI	CACGTC	2 cut(s)	1052, 1516
BmgT120I	GGNCC	4 cut(s)	206, 1363, 1565, 1610
BmrFI	CCNGG	4 cut(s)	1069, 1334, 2208, 2286
BmsI	GCATC	6 cut(s)	787, 850, 862, 1781, 2056, 2192
BmtI	GCTAGC	1 cut(s)	251
BpiI	GAAGAC	1 cut(s)	2433
BplI	GAGNNNNNCTC	2 cut(s)	217, 249
BpmI	CTGGAG	1 cut(s)	726
Bpu10I	CCTNAGC	1 cut(s)	782
BpuEI	CTTGAG	2 cut(s)	297, 799
BsaBI	GATNNNNATC	1 cut(s)	2070
BsaHI	GRCGYC	3 cut(s)	24, 164, 188
BsaI	GGTCTC	2 cut(s)	74, 2473
BsaJI	CCNNGG	6 cut(s)	167, 191, 364, 1625, 2207, 2469
BsaXI	ACNNNNNCTCC	4 cut(s)	2450, 2480, 2520, 2550
Bsc4I	CCNNNNNNNGG	9 cut(s)	33, 90, 134, 1300, 1333, 1828, 1852, 2262, 2542
Bse118I	RCCGGY	1 cut(s)	26
Bse1I	ACTGG	4 cut(s)	801, 857, 1385, 2454
Bse21I	CCTNAGG	1 cut(s)	2247
Bse3DI	GCAATG	2 cut(s)	1541, 1547
Bse8I	GATNNNNATC	1 cut(s)	2070
BseBI	CCWGG	4 cut(s)	1069, 1334, 2208, 2286
BseDI	CCNNGG	6 cut(s)	167, 191, 364, 1625, 2207, 2469
BseGI	GGATG	8 cut(s)	562, 568, 592, 1525, 1597, 1916, 2401, 2573
BseJI	GATNNNNATC	1 cut(s)	2070
BseLI	CCNNNNNNNGG	9 cut(s)	33, 90, 134, 1300, 1333, 1828, 1852, 2262, 2542
BseMI	GCAATG	2 cut(s)	1541, 1547
BseMII	CTCAG	3 cut(s)	101, 1598, 2261
BseNI	ACTGG	4 cut(s)	801, 857, 1385, 2454
BseRI	GAGGAG	2 cut(s)	2171, 2512
BseSI	GKGCMC	2 cut(s)	744, 1327
BseXI	GCAGC	8 cut(s)	652, 1225, 1228, 1592, 1666, 1718, 1904, 2040
BseYI	CCCAGC	2 cut(s)	897, 1275
BshFI	GGCC	6 cut(s)	767, 999, 1365, 1980, 2266, 2360
BshNI	GGYRCC	4 cut(s)	23, 187, 368, 1781
BsiHKAI	GWGCWC	1 cut(s)	744
BsiHKCI	CYCGRG	1 cut(s)	327
BsiSI	CCGG	1 cut(s)	27
BslFI	GGGAC	3 cut(s)	111, 2000, 2239
BslI	CCNNNNNNNGG	9 cut(s)	33, 90, 134, 1300, 1333, 1828, 1852, 2262, 2542
BsmAI	GTCTC	8 cut(s)	74, 155, 538, 951, 1184, 2470, 2473, 2585
BsmBI	CGTCTC	2 cut(s)	155, 2470
BsmFI	GGGAC	3 cut(s)	111, 2000, 2239
BsmI	GAATGC	2 cut(s)	1156, 1293
BsnI	GGCC	6 cut(s)	767, 999, 1365, 1980, 2266, 2360
Bso31I	GGTCTC	2 cut(s)	74, 2473
BsoBI	CYCGRG	1 cut(s)	327
Bsp1286I	GDGCHC	3 cut(s)	744, 1327, 1769
Bsp1407I	TGTACA	2 cut(s)	2312, 2590
BspACI	CCGC	2 cut(s)	2224, 2451
BspANI	GGCC	6 cut(s)	767, 999, 1365, 1980, 2266, 2360
BspCNI	CTCAG	3 cut(s)	100, 1597, 2260
BspHI	TCATGA	1 cut(s)	117
BspMI	ACCTGC	1 cut(s)	2135
BspOI	GCTAGC	1 cut(s)	251
BspPI	GGATC	8 cut(s)	117, 335, 348, 431, 946, 1376, 1389, 1943
BspQI	GCTCTTC	1 cut(s)	240
BspT107I	GGYRCC	4 cut(s)	23, 187, 368, 1781
BspTI	CTTAAG	2 cut(s)	2260, 2330
BspTNI	GGTCTC	2 cut(s)	74, 2473
BsrDI	GCAATG	2 cut(s)	1541, 1547
BsrFI	RCCGGY	1 cut(s)	26
BsrGI	TGTACA	2 cut(s)	2312, 2590
BsrI	ACTGG	4 cut(s)	801, 857, 1385, 2454
BssAI	RCCGGY	1 cut(s)	26
BssECI	CCNNGG	6 cut(s)	167, 191, 364, 1625, 2207, 2469
BssNI	GRCGYC	3 cut(s)	24, 164, 188
BssT1I	CCWWGG	2 cut(s)	1625, 2469
Bst2UI	CCWGG	4 cut(s)	1069, 1334, 2208, 2286
Bst4CI	ACNGT	6 cut(s)	271, 859, 1819, 2105, 2112, 2410
Bst6I	CTCTTC	3 cut(s)	240, 1847, 2376
BstACI	GRCGYC	3 cut(s)	24, 164, 188
BstAFI	CTTAAG	2 cut(s)	2260, 2330
BstAPI	GCANNNNNTGC	1 cut(s)	2180
BstAUI	TGTACA	2 cut(s)	2312, 2590
BstC8I	GCNNGC	5 cut(s)	249, 1057, 1236, 1367, 2224
BstDEI	CTNAG	8 cut(s)	87, 782, 1186, 1508, 1584, 1795, 2040, 2247
BstEII	GGTNACC	1 cut(s)	1447
BstENI	CCTNNNNNAGG	2 cut(s)	1331, 2540
BstF5I	GGATG	8 cut(s)	562, 568, 592, 1525, 1597, 1916, 2401, 2573
BstH2I	RGCGCY	3 cut(s)	27, 191, 1633
BstHHI	GCGC	4 cut(s)	26, 61, 190, 1632
BstMAI	GTCTC	8 cut(s)	74, 155, 538, 951, 1184, 2470, 2473, 2585
BstMWI	GCNNNNNNNGC	9 cut(s)	872, 1577, 1706, 1954, 2020, 2075, 2158, 2180, 2341
BstNI	CCWGG	4 cut(s)	1069, 1334, 2208, 2286
BstNSI	RCATGY	2 cut(s)	1267, 1706
BstPI	GGTNACC	1 cut(s)	1447
BstSCI	CCNGG	4 cut(s)	1067, 1332, 2206, 2284
BstSFI	CTRYAG	2 cut(s)	1298, 2101
BstSLI	GKGCMC	2 cut(s)	744, 1327
BstV1I	GCAGC	8 cut(s)	652, 1225, 1228, 1592, 1666, 1718, 1904, 2040
BstV2I	GAAGAC	1 cut(s)	2433
BstX2I	RGATCY	6 cut(s)	340, 688, 1338, 1381, 1837, 2549
BstXI	CCANNNNNNTGG	2 cut(s)	1554, 1777
BstYI	RGATCY	6 cut(s)	340, 688, 1338, 1381, 1837, 2549
Bsu36I	CCTNAGG	1 cut(s)	2247
BsuRI	GGCC	6 cut(s)	767, 999, 1365, 1980, 2266, 2360
BtrI	CACGTC	2 cut(s)	1052, 1516
BtsCI	GGATG	8 cut(s)	562, 568, 592, 1525, 1597, 1916, 2401, 2573
BtsIMutI	CAGTG	4 cut(s)	1945, 2406, 2430, 2461
BveI	ACCTGC	1 cut(s)	2135
Cac8I	GCNNGC	5 cut(s)	249, 1057, 1236, 1367, 2224
CciI	TCATGA	1 cut(s)	117
CfoI	GCGC	4 cut(s)	26, 61, 190, 1632
Cfr10I	RCCGGY	1 cut(s)	26
Cfr13I	GGNCC	4 cut(s)	206, 1363, 1565, 1610
CseI	GACGC	2 cut(s)	172, 2324
Csp6I	GTAC	6 cut(s)	369, 1502, 2106, 2313, 2528, 2591
CviQI	GTAC	6 cut(s)	369, 1502, 2106, 2313, 2528, 2591
DdeI	CTNAG	8 cut(s)	87, 782, 1186, 1508, 1584, 1795, 2040, 2247
DinI	GGCGCC	2 cut(s)	25, 189
DraI	TTTAAA	1 cut(s)	1476
DraIII	CACNNNGTG	2 cut(s)	1397, 1754
EaeI	YGGCCR	1 cut(s)	997
Eam1104I	CTCTTC	3 cut(s)	240, 1847, 2376
EarI	CTCTTC	3 cut(s)	240, 1847, 2376
EciI	GGCGGA	1 cut(s)	2440
Eco130I	CCWWGG	2 cut(s)	1625, 2469
Eco147I	AGGCCT	1 cut(s)	767
Eco24I	GRGCYC	1 cut(s)	1769
Eco31I	GGTCTC	2 cut(s)	74, 2473
Eco47I	GGWCC	3 cut(s)	206, 1565, 1610
Eco57I	CTGAAG	2 cut(s)	1970, 2394
Eco81I	CCTNAGG	1 cut(s)	2247
Eco88I	CYCGRG	1 cut(s)	327
Eco91I	GGTNACC	1 cut(s)	1447
EcoNI	CCTNNNNNAGG	2 cut(s)	1331, 2540
EcoO65I	GGTNACC	1 cut(s)	1447
EcoRI	GAATTC	1 cut(s)	1595
EcoRII	CCWGG	4 cut(s)	1067, 1332, 2206, 2284
EcoT14I	CCWWGG	2 cut(s)	1625, 2469
EcoT38I	GRGCYC	1 cut(s)	1769
EgeI	GGCGCC	2 cut(s)	25, 189
EheI	GGCGCC	2 cut(s)	25, 189
ErhI	CCWWGG	2 cut(s)	1625, 2469
Esp3I	CGTCTC	2 cut(s)	155, 2470
FaqI	GGGAC	3 cut(s)	111, 2000, 2239
FauI	CCCGC	1 cut(s)	2231
Fnu4HI	GCNGC	8 cut(s)	641, 1239, 1242, 1581, 1680, 1707, 1893, 2054
FokI	GGATG	8 cut(s)	569, 575, 599, 1532, 1604, 1923, 2408, 2580
FriOI	GRGCYC	1 cut(s)	1769
Fsp4HI	GCNGC	8 cut(s)	641, 1239, 1242, 1581, 1680, 1707, 1893, 2054
GlaI	GCGC	4 cut(s)	25, 60, 189, 1631
GluI	GCNGC	8 cut(s)	641, 1239, 1242, 1581, 1680, 1707, 1893, 2054
GsaI	CCCAGC	2 cut(s)	901, 1279
GsuI	CTGGAG	1 cut(s)	726
HaeII	RGCGCY	3 cut(s)	27, 191, 1633
HaeIII	GGCC	6 cut(s)	767, 999, 1365, 1980, 2266, 2360
HapII	CCGG	1 cut(s)	27
HgaI	GACGC	2 cut(s)	172, 2324
HhaI	GCGC	4 cut(s)	26, 61, 190, 1632
Hin1I	GRCGYC	3 cut(s)	24, 164, 188
Hin6I	GCGC	4 cut(s)	24, 59, 188, 1630
HinP1I	GCGC	4 cut(s)	24, 59, 188, 1630
HincII	GTYRAC	3 cut(s)	140, 1015, 2339
HindII	GTYRAC	3 cut(s)	140, 1015, 2339
HindIII	AAGCTT	3 cut(s)	817, 1405, 1735
HinfI	GANTC	9 cut(s)	124, 226, 708, 2036, 2084, 2252, 2389, 2414, 2438
HpaII	CCGG	1 cut(s)	27
HphI	GGTGA	5 cut(s)	161, 249, 405, 1459, 2365
Hpy166II	GTNNAC	5 cut(s)	140, 742, 1015, 2108, 2339
Hpy8I	GTNNAC	5 cut(s)	140, 742, 1015, 2108, 2339
Hpy99I	CGWCG	1 cut(s)	1053
HpyCH4III	ACNGT	6 cut(s)	271, 859, 1819, 2105, 2112, 2410
HpyCH4IV	ACGT	6 cut(s)	153, 359, 1051, 1500, 1515, 2368
HpyF10VI	GCNNNNNNNGC	9 cut(s)	872, 1577, 1706, 1954, 2020, 2075, 2158, 2180, 2341
HpyF3I	CTNAG	8 cut(s)	87, 782, 1186, 1508, 1584, 1795, 2040, 2247
HpySE526I	ACGT	6 cut(s)	153, 359, 1051, 1500, 1515, 2368
Hsp92I	GRCGYC	3 cut(s)	24, 164, 188
HspAI	GCGC	4 cut(s)	24, 59, 188, 1630
KasI	GGCGCC	2 cut(s)	23, 187
KpnI	GGTACC	1 cut(s)	372
LguI	GCTCTTC	1 cut(s)	240
LmnI	GCTCC	8 cut(s)	838, 863, 926, 1772, 2083, 2158, 2453, 2572
Lsp1109I	GCAGC	8 cut(s)	652, 1225, 1228, 1592, 1666, 1718, 1904, 2040
LweI	GCATC	6 cut(s)	787, 850, 862, 1781, 2056, 2192
MaeII	ACGT	6 cut(s)	153, 359, 1051, 1500, 1515, 2368
MaeIII	GTNAC	9 cut(s)	149, 255, 992, 1253, 1303, 1447, 1493, 1511, 2456
MfeI	CAATTG	4 cut(s)	447, 1227, 1674, 1930
MflI	RGATCY	6 cut(s)	340, 688, 1338, 1381, 1837, 2549
MhlI	GDGCHC	3 cut(s)	744, 1327, 1769
Mly113I	GGCGCC	2 cut(s)	24, 188
MlyI	GAGTC	4 cut(s)	133, 235, 717, 2261
MmeI	TCCRAC	5 cut(s)	785, 841, 904, 1569, 2076
MseI	TTAA	8 cut(s)	759, 878, 1107, 1205, 1475, 1617, 2261, 2331
MslI	CAYNNNNRTG	4 cut(s)	1139, 1268, 2006, 2145
MspCI	CTTAAG	2 cut(s)	2260, 2330
MspI	CCGG	1 cut(s)	27
MspR9I	CCNGG	4 cut(s)	1069, 1334, 2208, 2286
MunI	CAATTG	4 cut(s)	447, 1227, 1674, 1930
Mva1269I	GAATGC	2 cut(s)	1156, 1293
MvaI	CCWGG	4 cut(s)	1069, 1334, 2208, 2286
MwoI	GCNNNNNNNGC	9 cut(s)	872, 1577, 1706, 1954, 2020, 2075, 2158, 2180, 2341
NarI	GGCGCC	2 cut(s)	24, 188
NheI	GCTAGC	1 cut(s)	247
NmeAIII	GCCGAG	3 cut(s)	164, 192, 216
NmuCI	GTSAC	7 cut(s)	149, 255, 992, 1303, 1447, 1511, 2456
NspI	RCATGY	2 cut(s)	1267, 1706
PagI	TCATGA	1 cut(s)	117
PaqCI	CACCTGC	1 cut(s)	2135
PceI	AGGCCT	1 cut(s)	767
PciSI	GCTCTTC	1 cut(s)	240
PctI	GAATGC	2 cut(s)	1156, 1293
PfeI	GAWTC	5 cut(s)	2036, 2084, 2389, 2414, 2438
PflFI	GACNNNGTC	1 cut(s)	2462
PflMI	CCANNNNNTGG	1 cut(s)	1828
PkrI	GCNGC	8 cut(s)	642, 1240, 1243, 1582, 1681, 1708, 1894, 2055
PleI	GAGTC	4 cut(s)	132, 234, 716, 2260
PluTI	GGCGCC	2 cut(s)	27, 191
PpsI	GAGTC	4 cut(s)	132, 234, 716, 2260
PshBI	ATTAAT	1 cut(s)	759
Psp6I	CCWGG	4 cut(s)	1067, 1332, 2206, 2284
PspEI	GGTNACC	1 cut(s)	1447
PspFI	CCCAGC	2 cut(s)	897, 1275
PspGI	CCWGG	4 cut(s)	1067, 1332, 2206, 2284
PspPI	GGNCC	4 cut(s)	206, 1363, 1565, 1610
PsuI	RGATCY	6 cut(s)	340, 688, 1338, 1381, 1837, 2549
PsyI	GACNNNGTC	1 cut(s)	2462
RsaI	GTAC	6 cut(s)	370, 1503, 2107, 2314, 2529, 2592
RsaNI	GTAC	6 cut(s)	369, 1502, 2106, 2313, 2528, 2591
RseI	CAYNNNNRTG	4 cut(s)	1139, 1268, 2006, 2145
SapI	GCTCTTC	1 cut(s)	240
SaqAI	TTAA	8 cut(s)	759, 878, 1107, 1205, 1475, 1617, 2261, 2331
SatI	GCNGC	8 cut(s)	641, 1239, 1242, 1581, 1680, 1707, 1893, 2054
Sau96I	GGNCC	4 cut(s)	206, 1363, 1565, 1610
SchI	GAGTC	4 cut(s)	133, 235, 717, 2261
ScrFI	CCNGG	4 cut(s)	1069, 1334, 2208, 2286
SduI	GDGCHC	3 cut(s)	744, 1327, 1769
SfaNI	GCATC	6 cut(s)	787, 850, 862, 1781, 2056, 2192
SfcI	CTRYAG	2 cut(s)	1298, 2101
SfoI	GGCGCC	2 cut(s)	25, 189
SinI	GGWCC	3 cut(s)	206, 1565, 1610
SmiMI	CAYNNNNRTG	4 cut(s)	1139, 1268, 2006, 2145
SmlI	CTYRAG	4 cut(s)	312, 814, 2260, 2330
SmoI	CTYRAG	4 cut(s)	312, 814, 2260, 2330
SseBI	AGGCCT	1 cut(s)	767
SsiI	CCGC	2 cut(s)	2224, 2451
SspDI	GGCGCC	2 cut(s)	23, 187
StuI	AGGCCT	1 cut(s)	767
StyD4I	CCNGG	4 cut(s)	1067, 1332, 2206, 2284
StyI	CCWWGG	2 cut(s)	1625, 2469
TaaI	ACNGT	6 cut(s)	271, 859, 1819, 2105, 2112, 2410
TaiI	ACGT	6 cut(s)	156, 362, 1054, 1503, 1518, 2371
TaqI	TCGA	3 cut(s)	386, 1329, 1670
TaqII	GACCGA	1 cut(s)	125
TatI	WGTACW	3 cut(s)	2105, 2312, 2590
TfiI	GAWTC	5 cut(s)	2036, 2084, 2389, 2414, 2438
Tru1I	TTAA	8 cut(s)	759, 878, 1107, 1205, 1475, 1617, 2261, 2331
Tru9I	TTAA	8 cut(s)	759, 878, 1107, 1205, 1475, 1617, 2261, 2331
TscAI	CASTG	4 cut(s)	1945, 2413, 2437, 2461
TseFI	GTSAC	7 cut(s)	149, 255, 992, 1303, 1447, 1511, 2456
TseI	GCWGC	8 cut(s)	640, 1238, 1241, 1580, 1679, 1706, 1892, 2053
Tsp45I	GTSAC	7 cut(s)	149, 255, 992, 1303, 1447, 1511, 2456
TspGWI	ACGGA	1 cut(s)	1037
TspRI	CASTG	4 cut(s)	1945, 2413, 2437, 2461
Tth111I	GACNNNGTC	1 cut(s)	2462
Van91I	CCANNNNNTGG	1 cut(s)	1828
Vha464I	CTTAAG	2 cut(s)	2260, 2330
VneI	GTGCAC	1 cut(s)	740
VpaK11BI	GGWCC	3 cut(s)	206, 1565, 1610
VspI	ATTAAT	1 cut(s)	759
XagI	CCTNNNNNAGG	2 cut(s)	1331, 2540
XapI	RAATTY	2 cut(s)	1309, 1595
XbaI	TCTAGA	1 cut(s)	1861
XceI	RCATGY	2 cut(s)	1267, 1706
XmaJI	CCTAGG	1 cut(s)	1625

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.