Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0012783

Physical Location & Seq

Genomic Coordinates Reverse (-)

7224640 .. 7227619

Gene Structure 2980 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1101600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2061 bp

ATGAAGGCATTTCAGGTGGGAGTATGGAGTTTATGGTCGATTTGGCTAACTGGGTTGGCGCTAATTGCCCTCTCCCTGTATGCCACTCAATGCTTTCCTTCCCTCAAGGATCAGATCATGAGGCCCCAGCTCGGTCAACGGGCTGGCGGAGGTTTGGACACTCCTAGGATTACTATATTCTCGGCGCCTGCGCCTTTTGCTGGTTCTGTTGGGGGTAGGCAGAGTCTGGCTGTTCGCTCATGGCTTGCATTGTCTCCACAGATTACAGTTGTGCTCTTCAGCAGGGACCCTTCTGCTGTTTCCTTTGCCGGAGCGTTTGGTTTGCGGGTTTTGGTCGATCCTAACATCGATTTCACGTTCCTCGGTACACCATTTTTTCATTCGATGATGGCAAGATCACAGTCCTTTATAACGGACATTTCTGTTCTGGTTGATCCTGAAACCATTGTTTTACCTGACTTTGTTTCCACCCTGAACTATGCTTACACACTTGACCGAGATTGGCTTCTAGTTGCTTCATCACGAAATGCATCCTACTTCCCATTCTACTTGGACGAGGATGGAAAAAATTGGCAAAGAGAGGGTGGCGAATTGATGAGAACACAAGAGTTGCAGGAGATTTTTGGTCAGAGTTGGCAATGGACTCCCTGTGAAGGGAAGTTGCTTATGGCATGGAATAATGGAGATACGCCACTACATTCGGGAGTCCTTCCTCCTTTCTTATACGGTAGAGGGGTGCACAACAGTTGGATCGTTAATGAGGCCTTGTCATCTGAACTGAGGTTTGTATTTGATACCAGTTGGACAGTCTCAAGCTGCTATCTGATTGATCAGGACCGTCAGATTAACTGGCCTGTTGGATCTTCCAATGCTTCAAATTTTGAAAGAAGCTGGGAATATGCTGGAAATTCTCACCTTGGGGCACTATATGGATCATTGTCTCATCATGAAACTAACCATTCTAGCCTAGCAAAGCTTTTGAAGTGTGACGGGCAATATACTTTCGTAAACACAGCAGAAAACATTGCTTGTCCAATGGAATACCAAAGTGCAGGGAGATTACGAAAAGGAAGGATATTGCGTTCCTGGAGGAAGAAGAAAACTTTGGGTTTGGTTGACAGTGTTAAATCACTAGGCTGGTTGTCAGATTGCTATCTGATGGTTCCACTAAAGCGTTCGAAACCATTAGACCTTCCGTTCTCCTTGGAGACACTACTACCATTAAATGCAGACAAAAATAATACAATTGTGCTTGCTACTGCTGGATATAGTTACAAGGACATGCTCATGAGCTGGGTGTGCAGATTACACCAACTGCGGATCACAAATTTTATCATTTGTGCCCTCGACAAGGAAATATATGAGTTTGCTGTCTTGCAGGGCCTCCCTGTTTTCAGGGATCCATTAGCTCCGAGTGAGATCAGCAGCGACTGCCACTTTGGAACAAAATGCTTTCAGAAGGTGACCAAAGTGAAGTCCCGGATGGTTTTGAAGATACTGATGCTGGGTTACAACGTGCTTCTTAGCGATGTGGATGTATATTGGTTTGGAAATCCGCTGCCATTGCTCTACTCCTTTGGCCCTGCTATTCTTGCAGCACAGTCCGATGAATTCAACAAAACAGGACCAATCAATGTACCTAGGCGCTTGAACTCTGGCTTTTACTTTGCCCGTTCTGATAGTTCGACAATCAATGCTATGAGGAAGGTGGTGGCACATGCAGCAACTTCGGGTCTATCTGAGCAGCCAAGCTTCTACGACACGCTATGTGGAGAAGGGGGTTCCAATCGTGTGGGTGACGATAGATGCTTGGAACCTGAAACAAATCTGACTGTCCATTTCTTGGATAGAGATCTCTTCCCAAATGGTGCATATCTGGACCTGTGGCAGAGGAAAAACGTGAAGGCAGCCTGTGCGAAGCTGGGTTGTTTGGTTCTCCATAACAATTGGATCAGCGGGAGACTGAAGAAGTTAGAAAGGCAGGTTTTATCAGGCCTATGGGAATATGATACCAGCACAAGGATGTGCCGGCACGAGTTCAACTTAGTAAACAAAGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006464 GO:0006486 GO:0006807 GO:0008150 GO:0008152 GO:0008194 GO:0008378 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009987 GO:0012505 GO:0016740 GO:0016757 GO:0016758 GO:0019538 GO:0034645 GO:0035250 GO:0036211 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0070085 GO:0071554 GO:0071704 GO:0071840 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4228 Nucleotid_trans PNISR

Protein Analysis

687

Amino Acids

77.08

Weight (kDa)

8.38

Isoelectric Point (pI)

39.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Nucleotid_trans	PF03407	441 - 660	5e-45	Nucleotide-diphospho-sugar transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012783)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G70630 AT1G70630 AT1G70630 AT1G70630 AT1G70630 AT1G70630 AT1G70630
fragaria_vesca	FvH4_4g25550
malus_domestica	MD13G1101600.v1.1
prunus_persica	Prupe.1G244200_v2.0.a1
pyrus_communis	pycom13g08870 pycom16g08670
rosa_chinensis	RchiOBHm_Chr4g0432961
rosa_laevigata	RLG00000006798
rosa_samantha	Rh4AG318200 Rh4BG326300 Rh4CG341600 Rh4DG321500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	410
Acc36I	ACCTGC	1 cut(s)	1972
AccB1I	GGYRCC	1 cut(s)	184
AccB7I	CCANNNNNTGG	1 cut(s)	1843
AciI	CCGC	5 cut(s)	147, 325, 1318, 1556, 1956
AcsI	RAATTY	4 cut(s)	877, 907, 1327, 1610
AcuI	CTGAAG	2 cut(s)	262, 1985
AcyI	GRCGYC	1 cut(s)	185
AfaI	GTAC	2 cut(s)	367, 1638
AfiI	CCNNNNNNNGG	7 cut(s)	131, 200, 653, 654, 1351, 1843, 2019
AgsI	TTSAA	7 cut(s)	876, 884, 982, 1492, 1615, 1651, 2041
AjnI	CCWGG	1 cut(s)	1085
AjuI	GAANNNNNNNTTGG	2 cut(s)	1088, 1120
AloI	GAACNNNNNNTCC	2 cut(s)	1066, 1098
AluBI	AGCT	8 cut(s)	130, 816, 891, 976, 1293, 1409, 1752, 1921
AluI	AGCT	8 cut(s)	130, 816, 891, 976, 1293, 1409, 1752, 1921
Alw21I	GWGCWC	2 cut(s)	276, 741
Alw26I	GTCTC	5 cut(s)	258, 814, 945, 1202, 1954
Alw44I	GTGCAC	1 cut(s)	737
AlwNI	CAGNNNCTG	2 cut(s)	226, 1431
AoxI	GGCC	6 cut(s)	122, 762, 851, 1381, 1579, 1993
ApaLI	GTGCAC	1 cut(s)	737
ApeKI	GCWGC	7 cut(s)	816, 1425, 1558, 1595, 1721, 1744, 1907
ApoI	RAATTY	4 cut(s)	877, 907, 1327, 1610
ArsI	GACNNNNNNTTYG	2 cut(s)	1421, 1453
AspA2I	CCTAGG	2 cut(s)	164, 1640
AspLEI	GCGC	4 cut(s)	61, 187, 193, 1647
AspS9I	GGNCC	7 cut(s)	123, 286, 835, 1381, 1580, 1625, 1879
AsuC2I	CCSGG	1 cut(s)	1480
AsuHPI	GGTGA	3 cut(s)	905, 1474, 1808
AsuII	TTCGAA	1 cut(s)	1178
AvaII	GGWCC	4 cut(s)	286, 835, 1625, 1879
AvrII	CCTAGG	2 cut(s)	164, 1640
BaeGI	GKGCMC	3 cut(s)	741, 925, 1345
BamHI	GGATCC	1 cut(s)	1399
BanI	GGYRCC	1 cut(s)	184
BauI	CACGAG	1 cut(s)	2033
Bbv12I	GWGCWC	2 cut(s)	276, 741
BbvI	GCAGC	7 cut(s)	803, 1437, 1545, 1607, 1733, 1756, 1919
BccI	CCATC	4 cut(s)	382, 554, 1153, 1477
BcgI	CGANNNNNNTGC	2 cut(s)	1710, 1744
BciT130I	CCWGG	1 cut(s)	1087
BclI	TGATCA	1 cut(s)	829
BcnI	CCSGG	1 cut(s)	1480
BcoDI	GTCTC	5 cut(s)	258, 814, 945, 1202, 1954
BfaI	CTAG	6 cut(s)	165, 509, 963, 968, 1133, 1641
BfoI	RGCGCY	3 cut(s)	62, 188, 1648
BfuAI	ACCTGC	1 cut(s)	1972
BglII	AGATCT	1 cut(s)	1852
BisI	GCNGC	7 cut(s)	817, 1426, 1559, 1596, 1722, 1745, 1908
BlnI	CCTAGG	2 cut(s)	164, 1640
BlsI	GCNGC	7 cut(s)	818, 1427, 1560, 1597, 1723, 1746, 1909
Bme1390I	CCNGG	2 cut(s)	1087, 1480
Bme18I	GGWCC	4 cut(s)	286, 835, 1625, 1879
BmgT120I	GGNCC	7 cut(s)	123, 286, 835, 1381, 1580, 1625, 1879
BmiI	GGNNCC	8 cut(s)	125, 186, 287, 288, 1164, 1401, 1783, 1815
BmrFI	CCNGG	2 cut(s)	1087, 1480
BmrI	ACTGGG	1 cut(s)	60
BmsI	GCATC	3 cut(s)	539, 1491, 1796
BmuI	ACTGGG	1 cut(s)	60
BpmI	CTGGAG	1 cut(s)	1108
Bpu14I	TTCGAA	1 cut(s)	1178
BpuEI	CTTGAG	2 cut(s)	89, 796
BpuMI	CCSGG	1 cut(s)	1480
Bsa29I	ATCGAT	1 cut(s)	348
BsaBI	GATNNNNATC	2 cut(s)	1152, 1851
BsaHI	GRCGYC	1 cut(s)	185
BsaJI	CCNNGG	5 cut(s)	164, 361, 916, 1203, 1640
Bsc4I	CCNNNNNNNGG	7 cut(s)	131, 200, 653, 654, 1351, 1843, 2019
Bse118I	RCCGGY	1 cut(s)	2028
Bse1I	ACTGG	3 cut(s)	55, 798, 854
Bse3DI	GCAATG	3 cut(s)	644, 1023, 1562
Bse8I	GATNNNNATC	2 cut(s)	1152, 1851
BseBI	CCWGG	1 cut(s)	1087
BseCI	ATCGAT	1 cut(s)	348
BseDI	CCNNGG	5 cut(s)	164, 361, 916, 1203, 1640
BseGI	GGATG	5 cut(s)	530, 565, 1488, 1540, 2028
BseJI	GATNNNNATC	2 cut(s)	1152, 1851
BseLI	CCNNNNNNNGG	7 cut(s)	131, 200, 653, 654, 1351, 1843, 2019
BseMI	GCAATG	3 cut(s)	644, 1023, 1562
BseMII	CTCAG	2 cut(s)	770, 1731
BseNI	ACTGG	3 cut(s)	55, 798, 854
BseSI	GKGCMC	3 cut(s)	741, 925, 1345
BseXI	GCAGC	7 cut(s)	803, 1437, 1545, 1607, 1733, 1756, 1919
BseYI	CCCAGC	5 cut(s)	126, 891, 1293, 1504, 1921
BsgI	GTGCAG	2 cut(s)	1071, 1321
BshFI	GGCC	6 cut(s)	124, 764, 853, 1383, 1581, 1995
BshNI	GGYRCC	1 cut(s)	184
BshVI	ATCGAT	1 cut(s)	348
BsiHKAI	GWGCWC	2 cut(s)	276, 741
BsiSI	CCGG	3 cut(s)	309, 1480, 2029
BslFI	GGGAC	2 cut(s)	299, 1462
BslI	CCNNNNNNNGG	7 cut(s)	131, 200, 653, 654, 1351, 1843, 2019
BsmAI	GTCTC	5 cut(s)	258, 814, 945, 1202, 1954
BsmFI	GGGAC	2 cut(s)	299, 1462
BsnI	GGCC	6 cut(s)	124, 764, 853, 1383, 1581, 1995
Bsp119I	TTCGAA	1 cut(s)	1178
Bsp1286I	GDGCHC	4 cut(s)	276, 741, 925, 1345
BspACI	CCGC	5 cut(s)	147, 325, 1318, 1556, 1956
BspANI	GGCC	6 cut(s)	124, 764, 853, 1383, 1581, 1995
BspCNI	CTCAG	2 cut(s)	771, 1732
BspDI	ATCGAT	1 cut(s)	348
BspHI	TCATGA	3 cut(s)	117, 946, 1287
BspLI	GGNNCC	8 cut(s)	125, 186, 287, 288, 1164, 1401, 1783, 1815
BspMI	ACCTGC	1 cut(s)	1972
BspQI	GCTCTTC	1 cut(s)	281
BspT104I	TTCGAA	1 cut(s)	1178
BspT107I	GGYRCC	1 cut(s)	184
BsrDI	GCAATG	3 cut(s)	644, 1023, 1562
BsrFI	RCCGGY	1 cut(s)	2028
BsrI	ACTGG	3 cut(s)	55, 798, 854
BssAI	RCCGGY	1 cut(s)	2028
BssECI	CCNNGG	5 cut(s)	164, 361, 916, 1203, 1640
BssNI	GRCGYC	1 cut(s)	185
BssSI	CACGAG	1 cut(s)	2033
BssT1I	CCWWGG	4 cut(s)	164, 916, 1203, 1640
Bst2BI	CACGAG	1 cut(s)	2033
Bst2UI	CCWGG	1 cut(s)	1087
Bst4CI	ACNGT	9 cut(s)	268, 402, 728, 746, 808, 839, 1121, 1602, 1834
Bst6I	CTCTTC	2 cut(s)	281, 1862
BstACI	GRCGYC	1 cut(s)	185
BstAPI	GCANNNNNTGC	2 cut(s)	1431, 1913
BstBI	TTCGAA	1 cut(s)	1178
BstC8I	GCNNGC	5 cut(s)	145, 189, 246, 1254, 2030
BstDEI	CTNAG	4 cut(s)	779, 1523, 1740, 2044
BstEII	GGTNACC	1 cut(s)	1462
BstENI	CCTNNNNNAGG	1 cut(s)	1349
BstF5I	GGATG	5 cut(s)	530, 565, 1488, 1540, 2028
BstH2I	RGCGCY	3 cut(s)	62, 188, 1648
BstHHI	GCGC	4 cut(s)	61, 187, 193, 1647
BstMAI	GTCTC	5 cut(s)	258, 814, 945, 1202, 1954
BstMWI	GCNNNNNNNGC	8 cut(s)	65, 197, 1299, 1431, 1564, 1592, 1721, 1913
BstNI	CCWGG	1 cut(s)	1087
BstNSI	RCATGY	2 cut(s)	1285, 1721
BstPI	GGTNACC	1 cut(s)	1462
BstSCI	CCNGG	2 cut(s)	1085, 1478
BstSLI	GKGCMC	3 cut(s)	741, 925, 1345
BstV1I	GCAGC	7 cut(s)	803, 1437, 1545, 1607, 1733, 1756, 1919
BstX2I	RGATCY	3 cut(s)	860, 1399, 1852
BstXI	CCANNNNNNTGG	1 cut(s)	1792
BstYI	RGATCY	3 cut(s)	860, 1399, 1852
Bsu15I	ATCGAT	1 cut(s)	348
BsuRI	GGCC	6 cut(s)	124, 764, 853, 1383, 1581, 1995
BsuTUI	ATCGAT	1 cut(s)	348
BtgZI	GCGATG	1 cut(s)	1542
BtsCI	GGATG	5 cut(s)	530, 565, 1488, 1540, 2028
BtsIMutI	CAGTG	1 cut(s)	1126
BveI	ACCTGC	1 cut(s)	1972
Cac8I	GCNNGC	5 cut(s)	145, 189, 246, 1254, 2030
CaiI	CAGNNNCTG	2 cut(s)	226, 1431
CciI	TCATGA	3 cut(s)	117, 946, 1287
CfoI	GCGC	4 cut(s)	61, 187, 193, 1647
Cfr10I	RCCGGY	1 cut(s)	2028
Cfr13I	GGNCC	7 cut(s)	123, 286, 835, 1381, 1580, 1625, 1879
ClaI	ATCGAT	1 cut(s)	348
Csp6I	GTAC	2 cut(s)	366, 1637
CviAII	CATG	7 cut(s)	118, 240, 672, 947, 1282, 1288, 1718
CviQI	GTAC	2 cut(s)	366, 1637
DdeI	CTNAG	4 cut(s)	779, 1523, 1740, 2044
DinI	GGCGCC	1 cut(s)	186
Eam1104I	CTCTTC	2 cut(s)	281, 1862
EarI	CTCTTC	2 cut(s)	281, 1862
EciI	GGCGGA	1 cut(s)	162
Eco130I	CCWWGG	4 cut(s)	164, 916, 1203, 1640
Eco147I	AGGCCT	2 cut(s)	764, 1995
Eco47I	GGWCC	4 cut(s)	286, 835, 1625, 1879
Eco57I	CTGAAG	2 cut(s)	262, 1985
Eco91I	GGTNACC	1 cut(s)	1462
EcoNI	CCTNNNNNAGG	1 cut(s)	1349
EcoO109I	RGGNCCY	3 cut(s)	123, 286, 1381
EcoO65I	GGTNACC	1 cut(s)	1462
EcoRI	GAATTC	1 cut(s)	1610
EcoRII	CCWGG	1 cut(s)	1085
EcoT14I	CCWWGG	4 cut(s)	164, 916, 1203, 1640
EcoT22I	ATGCAT	1 cut(s)	532
EgeI	GGCGCC	1 cut(s)	186
EheI	GGCGCC	1 cut(s)	186
ErhI	CCWWGG	4 cut(s)	164, 916, 1203, 1640
FaeI	CATG	7 cut(s)	121, 243, 675, 950, 1285, 1291, 1721
FaqI	GGGAC	2 cut(s)	299, 1462
FatI	CATG	7 cut(s)	117, 239, 671, 946, 1281, 1287, 1717
FauI	CCCGC	2 cut(s)	318, 1949
FbaI	TGATCA	1 cut(s)	829
Fnu4HI	GCNGC	7 cut(s)	817, 1426, 1559, 1596, 1722, 1745, 1908
FokI	GGATG	5 cut(s)	517, 572, 1495, 1547, 2035
Fsp4HI	GCNGC	7 cut(s)	817, 1426, 1559, 1596, 1722, 1745, 1908
FspBI	CTAG	6 cut(s)	165, 509, 963, 968, 1133, 1641
GlaI	GCGC	4 cut(s)	60, 186, 192, 1646
GluI	GCNGC	7 cut(s)	817, 1426, 1559, 1596, 1722, 1745, 1908
GsaI	CCCAGC	5 cut(s)	130, 895, 1297, 1508, 1925
GsuI	CTGGAG	1 cut(s)	1108
HaeII	RGCGCY	3 cut(s)	62, 188, 1648
HaeIII	GGCC	6 cut(s)	124, 764, 853, 1383, 1581, 1995
HapII	CCGG	3 cut(s)	309, 1480, 2029
HhaI	GCGC	4 cut(s)	61, 187, 193, 1647
Hin1I	GRCGYC	1 cut(s)	185
Hin1II	CATG	7 cut(s)	121, 243, 675, 950, 1285, 1291, 1721
Hin6I	GCGC	4 cut(s)	59, 185, 191, 1645
HinP1I	GCGC	4 cut(s)	59, 185, 191, 1645
HincII	GTYRAC	2 cut(s)	137, 1117
HindII	GTYRAC	2 cut(s)	137, 1117
HindIII	AAGCTT	2 cut(s)	974, 1750
HinfI	GANTC	3 cut(s)	223, 643, 705
HpaII	CCGG	3 cut(s)	309, 1480, 2029
HphI	GGTGA	3 cut(s)	905, 1474, 1808
Hpy166II	GTNNAC	6 cut(s)	137, 368, 739, 1009, 1117, 2050
Hpy188III	TCNNGA	8 cut(s)	118, 437, 522, 702, 833, 947, 1288, 1877
Hpy8I	GTNNAC	6 cut(s)	137, 368, 739, 1009, 1117, 2050
HpyCH4III	ACNGT	9 cut(s)	268, 402, 728, 746, 808, 839, 1121, 1602, 1834
HpyCH4IV	ACGT	3 cut(s)	356, 1515, 1899
HpyF10VI	GCNNNNNNNGC	8 cut(s)	65, 197, 1299, 1431, 1564, 1592, 1721, 1913
HpyF3I	CTNAG	4 cut(s)	779, 1523, 1740, 2044
HpySE526I	ACGT	3 cut(s)	356, 1515, 1899
Hsp92I	GRCGYC	1 cut(s)	185
Hsp92II	CATG	7 cut(s)	121, 243, 675, 950, 1285, 1291, 1721
HspAI	GCGC	4 cut(s)	59, 185, 191, 1645
KasI	GGCGCC	1 cut(s)	184
KflI	GGGWCCC	1 cut(s)	286
KroI	GCCGGC	1 cut(s)	2028
KroNI	GCCGGC	1 cut(s)	2030
Ksp22I	TGATCA	1 cut(s)	829
LguI	GCTCTTC	1 cut(s)	281
LmnI	GCTCC	2 cut(s)	311, 1414
Lsp1109I	GCAGC	7 cut(s)	803, 1437, 1545, 1607, 1733, 1756, 1919
LweI	GCATC	3 cut(s)	539, 1491, 1796
MaeI	CTAG	6 cut(s)	165, 509, 963, 968, 1133, 1641
MaeII	ACGT	3 cut(s)	356, 1515, 1899
MaeIII	GTNAC	5 cut(s)	986, 1271, 1462, 1508, 1796
MboII	GAAGA	7 cut(s)	268, 855, 1105, 1108, 1504, 1849, 1978
MfeI	CAATTG	2 cut(s)	1245, 1945
MflI	RGATCY	3 cut(s)	860, 1399, 1852
MhlI	GDGCHC	4 cut(s)	276, 741, 925, 1345
MluCI	AATT	9 cut(s)	63, 568, 590, 877, 907, 1245, 1327, 1610, 1945
Mly113I	GGCGCC	1 cut(s)	185
MlyI	GAGTC	3 cut(s)	232, 637, 714
MmeI	TCCRAC	3 cut(s)	728, 782, 838
Mph1103I	ATGCAT	1 cut(s)	532
MroNI	GCCGGC	1 cut(s)	2028
MseI	TTAA	4 cut(s)	756, 846, 1125, 1223
MslI	CAYNNNNRTG	2 cut(s)	1286, 2021
MspA1I	CMGCKG	2 cut(s)	1558, 1956
MspI	CCGG	3 cut(s)	309, 1480, 2029
MspR9I	CCNGG	2 cut(s)	1087, 1480
MunI	CAATTG	2 cut(s)	1245, 1945
MvaI	CCWGG	1 cut(s)	1087
MwoI	GCNNNNNNNGC	8 cut(s)	65, 197, 1299, 1431, 1564, 1592, 1721, 1913
NaeI	GCCGGC	1 cut(s)	2030
NarI	GGCGCC	1 cut(s)	185
NciI	CCSGG	1 cut(s)	1480
NgoMIV	GCCGGC	1 cut(s)	2028
NlaIII	CATG	7 cut(s)	121, 243, 675, 950, 1285, 1291, 1721
NlaIV	GGNNCC	8 cut(s)	125, 186, 287, 288, 1164, 1401, 1783, 1815
NmeAIII	GCCGAG	1 cut(s)	161
NmuCI	GTSAC	3 cut(s)	986, 1462, 1796
NsiI	ATGCAT	1 cut(s)	532
NspI	RCATGY	2 cut(s)	1285, 1721
NspV	TTCGAA	1 cut(s)	1178
PagI	TCATGA	3 cut(s)	117, 946, 1287
PceI	AGGCCT	2 cut(s)	764, 1995
PciSI	GCTCTTC	1 cut(s)	281
PdiI	GCCGGC	1 cut(s)	2030
PflMI	CCANNNNNTGG	1 cut(s)	1843
PfoI	TCCNGGA	2 cut(s)	1085, 1478
PkrI	GCNGC	7 cut(s)	818, 1427, 1560, 1597, 1723, 1746, 1909
PleI	GAGTC	3 cut(s)	231, 637, 713
PluTI	GGCGCC	1 cut(s)	188
PpsI	GAGTC	3 cut(s)	231, 637, 713
PpuMI	RGGWCCY	1 cut(s)	286
PsiI	TTATAA	1 cut(s)	410
Psp5II	RGGWCCY	1 cut(s)	286
Psp6I	CCWGG	1 cut(s)	1085
PspEI	GGTNACC	1 cut(s)	1462
PspFI	CCCAGC	5 cut(s)	126, 891, 1293, 1504, 1921
PspGI	CCWGG	1 cut(s)	1085
PspN4I	GGNNCC	8 cut(s)	125, 186, 287, 288, 1164, 1401, 1783, 1815
PspPI	GGNCC	7 cut(s)	123, 286, 835, 1381, 1580, 1625, 1879
PspPPI	RGGWCCY	1 cut(s)	286
PsrI	GAACNNNNNNTAC	2 cut(s)	467, 499
PstNI	CAGNNNCTG	2 cut(s)	226, 1431
PsuI	RGATCY	3 cut(s)	860, 1399, 1852
RsaI	GTAC	2 cut(s)	367, 1638
RsaNI	GTAC	2 cut(s)	366, 1637
RseI	CAYNNNNRTG	2 cut(s)	1286, 2021
SapI	GCTCTTC	1 cut(s)	281
SaqAI	TTAA	4 cut(s)	756, 846, 1125, 1223
SatI	GCNGC	7 cut(s)	817, 1426, 1559, 1596, 1722, 1745, 1908
Sau96I	GGNCC	7 cut(s)	123, 286, 835, 1381, 1580, 1625, 1879
SchI	GAGTC	3 cut(s)	232, 637, 714
ScrFI	CCNGG	2 cut(s)	1087, 1480
SduI	GDGCHC	4 cut(s)	276, 741, 925, 1345
SfaNI	GCATC	3 cut(s)	539, 1491, 1796
SfoI	GGCGCC	1 cut(s)	186
SfuI	TTCGAA	1 cut(s)	1178
SinI	GGWCC	4 cut(s)	286, 835, 1625, 1879
SmiMI	CAYNNNNRTG	2 cut(s)	1286, 2021
SmlI	CTYRAG	2 cut(s)	104, 811
SmoI	CTYRAG	2 cut(s)	104, 811
Sse9I	AATT	9 cut(s)	63, 568, 590, 877, 907, 1245, 1327, 1610, 1945
SseBI	AGGCCT	2 cut(s)	764, 1995
SsiI	CCGC	5 cut(s)	147, 325, 1318, 1556, 1956
SspDI	GGCGCC	1 cut(s)	184
SspMI	CTAG	6 cut(s)	165, 509, 963, 968, 1133, 1641
StuI	AGGCCT	2 cut(s)	764, 1995
StyD4I	CCNGG	2 cut(s)	1085, 1478
StyI	CCWWGG	4 cut(s)	164, 916, 1203, 1640
TaaI	ACNGT	9 cut(s)	268, 402, 728, 746, 808, 839, 1121, 1602, 1834
TaiI	ACGT	3 cut(s)	359, 1518, 1902
TaqI	TCGA	7 cut(s)	38, 336, 348, 383, 1178, 1347, 1685
TaqII	GACCGA	2 cut(s)	122, 510
TasI	AATT	9 cut(s)	63, 568, 590, 877, 907, 1245, 1327, 1610, 1945
Tru1I	TTAA	4 cut(s)	756, 846, 1125, 1223
Tru9I	TTAA	4 cut(s)	756, 846, 1125, 1223
TscAI	CASTG	1 cut(s)	1126
TseFI	GTSAC	3 cut(s)	986, 1462, 1796
TseI	GCWGC	7 cut(s)	816, 1425, 1558, 1595, 1721, 1744, 1907
Tsp45I	GTSAC	3 cut(s)	986, 1462, 1796
TspDTI	ATGAA	5 cut(s)	17, 368, 507, 963, 1623
TspGWI	ACGGA	2 cut(s)	428, 1185
TspRI	CASTG	1 cut(s)	1126
Van91I	CCANNNNNTGG	1 cut(s)	1843
VneI	GTGCAC	1 cut(s)	737
VpaK11BI	GGWCC	4 cut(s)	286, 835, 1625, 1879
XagI	CCTNNNNNAGG	1 cut(s)	1349
XapI	RAATTY	4 cut(s)	877, 907, 1327, 1610
XceI	RCATGY	2 cut(s)	1285, 1721
XmaJI	CCTAGG	2 cut(s)	164, 1640
XspI	CTAG	6 cut(s)	165, 509, 963, 968, 1133, 1641
Zsp2I	ATGCAT	1 cut(s)	532

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.