FvH4_4g32490

Belongs to the peptidase S10 family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Reverse (-)
31113574 .. 31115001
1428 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g32490.t1

Sequence Viewer

Length: 1428 bp
ATGGAGTCAACGTCGACCCTCAAGCTTCTTCTCAAGCTCACCATCTTCATCTCCATCTCTGTTTTCATATTGCTTCAACTCTTTCCCATCTTCCATCTTCATCGAGCTTCGTCCTTATGGCCACCCTCCAAGTTTTCATTCTTCACTACTGCACCAATCTCTCTCTTCCCCAAACAAGCTTTGCCAACCATGTCAGGCTACCTCAAAGTCAACTCCACCACAGGCTCCTCCATTTTCTACACCTTCTATGAAGCACAAAGCCTCACCTTCCCTAACCTCTCGCAAACCCCACTTCTCATTTGGCTCCAGGGTGGGCCCGGATGCTCCTCCTTGTTTGGTAACTTCATGGAGATTGGTCCTTGGCATGTCAACTTATACCATCACCATCATGATCTTGAGAACCAAGCCTTTGTGCTTGAACCTAACCCCGGTTCCTGGAACCGGATTTTCGGCCTTGTTTTCCTTGATAATCCGATAGGATCCGGGTTCAGCATCGCCTCTAGCAGCGAGGAAATCCCTAGAGATCAATTTTCGATGGCTAAACATTTGTACATTGCAATCACAAAGTTTATTGAACTTGATCCAATGTTGTTTAGCTCTCGTCCGCTTTATGTAGTGGGCGAGAGCTATGCTGGCAAGTACGTGCCAGCAATTGGCTACTATATACTCAAGAAGAATGATGAGTCTGATCATGTCATTAACTTAGCTGGCGTTGCTATAGGAAATGGTTTGATTGACCCGGAGACTCAGGTGGCCACTCATGCAGACAATGCTTACTTTTCGGGTTTGATCAATGAGAAACAGAGGAGGGAGATGGAGATGTATCAGAACGAGGCGATCAGGCTAGCCAAATTGAAACGCTGGAGAGATGCGACCAATGCTAGGTACCGAGTTGTGGATATGCTGAGTGACATGACAGGATTGGCCACATTGTTTGACTACTCCAAGAAAGCTCCTTACCACAAGACTCAATGGATCACTGACTTTTTGCACGACGAAAGGGTGAAGAGGATTATGAATGTGCAGGAGTCGGCGGTGTTTAGAAACTGCAGCCGTGTAGTGAAAGTTGCTTTGTATGAGGATAACATGAAGAGTGTGAAGTACATGGTGGAGTTGTTGGTGAAGAGGAGCAAGGTGTTGTTGTATCAAGGGCAGTTTGATTTGTGGGATGGGGTGTTTTCGACCACAGCGTGGGTGAAGACGTTGGAATGGGAGGAGATTGGGAAGTTTTTGGCGGCGGAGAGGAGGGTTTGGAGAGGCAGAGGGGATGAGCTTGCAGGGTATGTGCAGAGATGGAAGAGTTTGAGCAATGTTGTGGTTTCAAGAGCAGGGCATCTTGTGCCGGCTGACCAGCCAATGAACTCTCAGGCAATGATCGAAGGCTGGATTTTGGAAACAGGGTTGTTTGGTGATGAGCAATTGTTCTAA

Protein Analysis

476

Amino Acids

54.22

Weight (kDa)

7.24

Isoelectric Point (pI)

40.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 61 - 463 9.4e-97 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0018030)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g32490
rosa_chinensis RchiOBHm_Chr4g0441351
rosa_laevigata RLG00000006099
rosa_multiflora Rmu_co8458681.1_g000001 Rmu_sc0005516.1_g000007
rosa_roxburghii Rroxscaffold_5G00382240
rosa_rugosa Rorug04G0332500
rosa_samantha Rh4AG384600 Rh4BG398700 Rh4CG413800
rosa_wichuraiana Rw4G033200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 885
AccB1I GGYRCC 1 cut(s) 885
AccB7I CCANNNNNTGG 2 cut(s) 653, 1191
AccI GTMKAC 1 cut(s) 14
AciI CCGC 4 cut(s) 605, 1034, 1235, 1238
AclWI GGATC 4 cut(s) 474, 487, 575, 983
AcoI YGGCCR 3 cut(s) 119, 753, 924
AdeI CACNNNGTG 1 cut(s) 1191
AfaI GTAC 4 cut(s) 551, 641, 887, 1103
AfiI CCNNNNNNNGG 7 cut(s) 428, 435, 441, 653, 882, 895, 1191
AgsI TTSAA 5 cut(s) 77, 419, 575, 856, 1323
AjnI CCWGG 2 cut(s) 306, 434
AjuI GAANNNNNNNTTGG 2 cut(s) 122, 154
AluBI AGCT 9 cut(s) 25, 37, 107, 179, 597, 627, 707, 953, 1273
AluI AGCT 9 cut(s) 25, 37, 107, 179, 597, 627, 707, 953, 1273
Alw26I GTCTC 1 cut(s) 737
AlwI GGATC 4 cut(s) 474, 487, 575, 983
AoxI GGCC 5 cut(s) 119, 314, 451, 753, 924
ApaI GGGCCC 1 cut(s) 318
ApeKI GCWGC 2 cut(s) 504, 1050
Asp718I GGTACC 1 cut(s) 885
AspS9I GGNCC 3 cut(s) 314, 315, 356
AsuC2I CCSGG 4 cut(s) 318, 429, 484, 740
AsuHPI GGTGA 7 cut(s) 31, 256, 374, 1015, 1132, 1207, 1421
AsuNHI GCTAGC 1 cut(s) 844
AvaII GGWCC 1 cut(s) 356
BaeGI GKGCMC 1 cut(s) 318
BalI TGGCCA 3 cut(s) 121, 755, 926
BamHI GGATCC 1 cut(s) 479
BanI GGYRCC 1 cut(s) 885
BanII GRGCYC 1 cut(s) 318
BbsI GAAGAC 1 cut(s) 1205
BbvI GCAGC 2 cut(s) 516, 1062
BceAI ACGGC 1 cut(s) 1038
BcgI CGANNNNNNTGC 2 cut(s) 611, 645
BciT130I CCWGG 2 cut(s) 308, 436
BclI TGATCA 2 cut(s) 688, 789
BcnI CCSGG 4 cut(s) 318, 429, 484, 740
BcoDI GTCTC 1 cut(s) 737
BfaI CTAG 4 cut(s) 501, 519, 845, 882
BfmI CTRYAG 2 cut(s) 717, 1048
BisI GCNGC 3 cut(s) 505, 1051, 1236
BlsI GCNGC 3 cut(s) 506, 1052, 1237
Bme1390I CCNGG 6 cut(s) 308, 318, 429, 436, 484, 740
Bme18I GGWCC 1 cut(s) 356
BmgT120I GGNCC 3 cut(s) 314, 315, 356
BmiI GGNNCC 7 cut(s) 226, 305, 316, 433, 440, 481, 887
BmrFI CCNGG 6 cut(s) 308, 318, 429, 436, 484, 740
BmsI GCATC 4 cut(s) 311, 501, 859, 1342
BmtI GCTAGC 1 cut(s) 848
BpiI GAAGAC 1 cut(s) 1205
BpmI CTGGAG 2 cut(s) 290, 883
BpuEI CTTGAG 4 cut(s) 5, 17, 416, 653
BpuMI CCSGG 4 cut(s) 318, 429, 484, 740
BsaAI YACGTR 1 cut(s) 643
BsaJI CCNNGG 3 cut(s) 307, 359, 427
BsaWI WCCGGW 1 cut(s) 441
BsaXI ACNNNNNCTCC 1 cut(s) 26
Bsc4I CCNNNNNNNGG 7 cut(s) 428, 435, 441, 653, 882, 895, 1191
Bse118I RCCGGY 1 cut(s) 1342
Bse3DI GCAATG 3 cut(s) 552, 1315, 1377
BseBI CCWGG 2 cut(s) 308, 436
BseDI CCNNGG 3 cut(s) 307, 359, 427
BseGI GGATG 3 cut(s) 326, 1174, 1273
BseLI CCNNNNNNNGG 7 cut(s) 428, 435, 441, 653, 882, 895, 1191
BseMI GCAATG 3 cut(s) 552, 1315, 1377
BseMII CTCAG 3 cut(s) 761, 896, 1379
BseRI GAGGAG 6 cut(s) 217, 316, 820, 1141, 1229, 1258
BseSI GKGCMC 1 cut(s) 318
BseXI GCAGC 2 cut(s) 516, 1062
BsgI GTGCAG 3 cut(s) 135, 1043, 1307
BshFI GGCC 5 cut(s) 121, 316, 453, 755, 926
BshNI GGYRCC 1 cut(s) 885
BsiSI CCGG 6 cut(s) 318, 429, 442, 483, 740, 1343
BslI CCNNNNNNNGG 7 cut(s) 428, 435, 441, 653, 882, 895, 1191
BsmAI GTCTC 1 cut(s) 737
BsnI GGCC 5 cut(s) 121, 316, 453, 755, 926
Bsp120I GGGCCC 1 cut(s) 314
Bsp1286I GDGCHC 1 cut(s) 318
Bsp1407I TGTACA 1 cut(s) 549
Bsp143I GATC 9 cut(s) 391, 479, 523, 580, 688, 789, 837, 975, 1374
BspACI CCGC 4 cut(s) 605, 1034, 1235, 1238
BspANI GGCC 5 cut(s) 121, 316, 453, 755, 926
BspCNI CTCAG 3 cut(s) 760, 897, 1378
BspHI TCATGA 1 cut(s) 388
BspLI GGNNCC 7 cut(s) 226, 305, 316, 433, 440, 481, 887
BspMAI CTGCAG 1 cut(s) 1052
BspOI GCTAGC 1 cut(s) 848
BspPI GGATC 4 cut(s) 474, 487, 575, 983
BspT107I GGYRCC 1 cut(s) 885
BsrDI GCAATG 3 cut(s) 552, 1315, 1377
BsrFI RCCGGY 1 cut(s) 1342
BsrGI TGTACA 1 cut(s) 549
BssAI RCCGGY 1 cut(s) 1342
BssECI CCNNGG 3 cut(s) 307, 359, 427
BssMI GATC 9 cut(s) 391, 479, 523, 580, 688, 789, 837, 975, 1374
BssT1I CCWWGG 1 cut(s) 359
Bst2UI CCWGG 2 cut(s) 308, 436
Bst6I CTCTTC 5 cut(s) 170, 1001, 1085, 1118, 1292
BstAPI GCANNNNNTGC 2 cut(s) 770, 1339
BstAUI TGTACA 1 cut(s) 549
BstBAI YACGTR 1 cut(s) 643
BstC8I GCNNGC 6 cut(s) 634, 648, 709, 846, 1275, 1344
BstDEI CTNAG 4 cut(s) 703, 747, 905, 1365
BstF5I GGATG 3 cut(s) 326, 1174, 1273
BstKTI GATC 9 cut(s) 394, 482, 526, 583, 691, 792, 840, 978, 1377
BstMAI GTCTC 1 cut(s) 737
BstMBI GATC 9 cut(s) 391, 479, 523, 580, 688, 789, 837, 975, 1374
BstMWI GCNNNNNNNGC 6 cut(s) 633, 713, 761, 770, 878, 1339
BstNI CCWGG 2 cut(s) 308, 436
BstNSI RCATGY 1 cut(s) 368
BstSCI CCNGG 6 cut(s) 306, 316, 427, 434, 482, 738
BstSFI CTRYAG 2 cut(s) 717, 1048
BstSLI GKGCMC 1 cut(s) 318
BstV1I GCAGC 2 cut(s) 516, 1062
BstV2I GAAGAC 1 cut(s) 1205
BstX2I RGATCY 1 cut(s) 479
BstYI RGATCY 1 cut(s) 479
BsuRI GGCC 5 cut(s) 121, 316, 453, 755, 926
BtgZI GCGATG 1 cut(s) 478
BtsCI GGATG 3 cut(s) 326, 1174, 1273
BtsIMutI CAGTG 1 cut(s) 978
Cac8I GCNNGC 6 cut(s) 634, 648, 709, 846, 1275, 1344
CciI TCATGA 1 cut(s) 388
Cfr10I RCCGGY 1 cut(s) 1342
Cfr13I GGNCC 3 cut(s) 314, 315, 356
Csp6I GTAC 4 cut(s) 550, 640, 886, 1102
CspCI CAANNNNNGTGG 2 cut(s) 916, 951
CviAII CATG 9 cut(s) 190, 346, 365, 389, 692, 761, 913, 1087, 1105
CviQI GTAC 4 cut(s) 550, 640, 886, 1102
DdeI CTNAG 4 cut(s) 703, 747, 905, 1365
DpnI GATC 9 cut(s) 393, 481, 525, 582, 690, 791, 839, 977, 1376
DpnII GATC 9 cut(s) 391, 479, 523, 580, 688, 789, 837, 975, 1374
DraIII CACNNNGTG 1 cut(s) 1191
EaeI YGGCCR 3 cut(s) 119, 753, 924
Eam1104I CTCTTC 5 cut(s) 170, 1001, 1085, 1118, 1292
EarI CTCTTC 5 cut(s) 170, 1001, 1085, 1118, 1292
EciI GGCGGA 1 cut(s) 1253
Eco130I CCWWGG 1 cut(s) 359
Eco24I GRGCYC 1 cut(s) 318
Eco47I GGWCC 1 cut(s) 356
EcoRII CCWGG 2 cut(s) 306, 434
EcoT14I CCWWGG 1 cut(s) 359
EcoT38I GRGCYC 1 cut(s) 318
ErhI CCWWGG 1 cut(s) 359
FaeI CATG 9 cut(s) 193, 349, 368, 392, 695, 764, 916, 1090, 1108
FatI CATG 9 cut(s) 189, 345, 364, 388, 691, 760, 912, 1086, 1104
FbaI TGATCA 2 cut(s) 688, 789
FblI GTMKAC 1 cut(s) 14
Fnu4HI GCNGC 3 cut(s) 505, 1051, 1236
FokI GGATG 3 cut(s) 333, 1181, 1280
FriOI GRGCYC 1 cut(s) 318
Fsp4HI GCNGC 3 cut(s) 505, 1051, 1236
FspBI CTAG 4 cut(s) 501, 519, 845, 882
GluI GCNGC 3 cut(s) 505, 1051, 1236
GsuI CTGGAG 2 cut(s) 290, 883
HaeIII GGCC 5 cut(s) 121, 316, 453, 755, 926
HapII CCGG 6 cut(s) 318, 429, 442, 483, 740, 1343
Hin1II CATG 9 cut(s) 193, 349, 368, 392, 695, 764, 916, 1090, 1108
HincII GTYRAC 4 cut(s) 9, 15, 211, 370
HindII GTYRAC 4 cut(s) 9, 15, 211, 370
HindIII AAGCTT 2 cut(s) 23, 177
HinfI GANTC 5 cut(s) 5, 683, 745, 967, 1028
HpaII CCGG 6 cut(s) 318, 429, 442, 483, 740, 1343
HphI GGTGA 7 cut(s) 31, 256, 374, 1015, 1132, 1207, 1421
Hpy166II GTNNAC 4 cut(s) 9, 15, 211, 370
Hpy188I TCNGA 3 cut(s) 474, 688, 828
Hpy188III TCNNGA 4 cut(s) 389, 395, 670, 1323
Hpy8I GTNNAC 4 cut(s) 9, 15, 211, 370
Hpy99I CGWCG 2 cut(s) 16, 998
HpyAV CCTTC 3 cut(s) 253, 277, 1373
HpyCH4IV ACGT 3 cut(s) 11, 642, 1202
HpyCH4V TGCA 8 cut(s) 152, 557, 764, 991, 1024, 1050, 1277, 1288
HpyF10VI GCNNNNNNNGC 6 cut(s) 633, 713, 761, 770, 878, 1339
HpyF3I CTNAG 4 cut(s) 703, 747, 905, 1365
HpySE526I ACGT 3 cut(s) 11, 642, 1202
Hsp92II CATG 9 cut(s) 193, 349, 368, 392, 695, 764, 916, 1090, 1108
KpnI GGTACC 1 cut(s) 889
KroI GCCGGC 1 cut(s) 1342
KroNI GCCGGC 1 cut(s) 1344
Ksp22I TGATCA 2 cut(s) 688, 789
Kzo9I GATC 9 cut(s) 391, 479, 523, 580, 688, 789, 837, 975, 1374
LmnI GCTCC 5 cut(s) 230, 309, 329, 958, 1128
Lsp1109I GCAGC 2 cut(s) 516, 1062
LweI GCATC 4 cut(s) 311, 501, 859, 1342
MaeI CTAG 4 cut(s) 501, 519, 845, 882
MaeII ACGT 3 cut(s) 11, 642, 1202
MaeIII GTNAC 2 cut(s) 338, 908
MalI GATC 9 cut(s) 393, 481, 525, 582, 690, 791, 839, 977, 1376
MboI GATC 9 cut(s) 391, 479, 523, 580, 688, 789, 837, 975, 1374
MfeI CAATTG 2 cut(s) 651, 1418
MflI RGATCY 1 cut(s) 479
MhlI GDGCHC 1 cut(s) 318
MlsI TGGCCA 3 cut(s) 121, 755, 926
MluCI AATT 4 cut(s) 527, 651, 851, 1418
MluNI TGGCCA 3 cut(s) 121, 755, 926
MlyI GAGTC 5 cut(s) 14, 692, 739, 961, 1037
MmeI TCCRAC 1 cut(s) 1185
Mox20I TGGCCA 3 cut(s) 121, 755, 926
MroNI GCCGGC 1 cut(s) 1342
MscI TGGCCA 3 cut(s) 121, 755, 926
MseI TTAA 1 cut(s) 699
MslI CAYNNNNRTG 1 cut(s) 387
Msp20I TGGCCA 3 cut(s) 121, 755, 926
MspI CCGG 6 cut(s) 318, 429, 442, 483, 740, 1343
MspR9I CCNGG 6 cut(s) 308, 318, 429, 436, 484, 740
MunI CAATTG 2 cut(s) 651, 1418
MvaI CCWGG 2 cut(s) 308, 436
MwoI GCNNNNNNNGC 6 cut(s) 633, 713, 761, 770, 878, 1339
NaeI GCCGGC 1 cut(s) 1344
NciI CCSGG 4 cut(s) 318, 429, 484, 740
NdeII GATC 9 cut(s) 391, 479, 523, 580, 688, 789, 837, 975, 1374
NgoMIV GCCGGC 1 cut(s) 1342
NheI GCTAGC 1 cut(s) 844
NlaIII CATG 9 cut(s) 193, 349, 368, 392, 695, 764, 916, 1090, 1108
NlaIV GGNNCC 7 cut(s) 226, 305, 316, 433, 440, 481, 887
NmuCI GTSAC 1 cut(s) 908
NspI RCATGY 1 cut(s) 368
PagI TCATGA 1 cut(s) 388
PcsI WCGNNNNNNNCGW 1 cut(s) 1187
PdiI GCCGGC 1 cut(s) 1344
PflMI CCANNNNNTGG 2 cut(s) 653, 1191
PfoI TCCNGGA 1 cut(s) 434
PkrI GCNGC 3 cut(s) 506, 1052, 1237
PleI GAGTC 5 cut(s) 13, 691, 739, 961, 1036
PpsI GAGTC 5 cut(s) 13, 691, 739, 961, 1036
Ppu21I YACGTR 1 cut(s) 643
Psp6I CCWGG 2 cut(s) 306, 434
PspGI CCWGG 2 cut(s) 306, 434
PspN4I GGNNCC 7 cut(s) 226, 305, 316, 433, 440, 481, 887
PspOMI GGGCCC 1 cut(s) 314
PspPI GGNCC 3 cut(s) 314, 315, 356
PstI CTGCAG 1 cut(s) 1052
PsuI RGATCY 1 cut(s) 479
RsaI GTAC 4 cut(s) 551, 641, 887, 1103
RsaNI GTAC 4 cut(s) 550, 640, 886, 1102
RseI CAYNNNNRTG 1 cut(s) 387
SalI GTCGAC 1 cut(s) 13
SaqAI TTAA 1 cut(s) 699
SatI GCNGC 3 cut(s) 505, 1051, 1236
Sau3AI GATC 9 cut(s) 391, 479, 523, 580, 688, 789, 837, 975, 1374
Sau96I GGNCC 3 cut(s) 314, 315, 356
SchI GAGTC 5 cut(s) 14, 692, 739, 961, 1037
ScrFI CCNGG 6 cut(s) 308, 318, 429, 436, 484, 740
SduI GDGCHC 1 cut(s) 318
SfaNI GCATC 4 cut(s) 311, 501, 859, 1342
SfcI CTRYAG 2 cut(s) 717, 1048
SinI GGWCC 1 cut(s) 356
SmiMI CAYNNNNRTG 1 cut(s) 387
SmlI CTYRAG 4 cut(s) 20, 32, 395, 668
SmoI CTYRAG 4 cut(s) 20, 32, 395, 668
Sse9I AATT 4 cut(s) 527, 651, 851, 1418
SsiI CCGC 4 cut(s) 605, 1034, 1235, 1238
SspMI CTAG 4 cut(s) 501, 519, 845, 882
StyD4I CCNGG 6 cut(s) 306, 316, 427, 434, 482, 738
StyI CCWWGG 1 cut(s) 359
TaiI ACGT 3 cut(s) 14, 645, 1205
TaqI TCGA 5 cut(s) 14, 103, 533, 1181, 1377
TasI AATT 4 cut(s) 527, 651, 851, 1418
TatI WGTACW 2 cut(s) 549, 1101
TauI GCSGC 1 cut(s) 1238
Tru1I TTAA 1 cut(s) 699
Tru9I TTAA 1 cut(s) 699
TscAI CASTG 1 cut(s) 985
TseFI GTSAC 1 cut(s) 908
TseI GCWGC 2 cut(s) 504, 1050
Tsp45I GTSAC 1 cut(s) 908
TspDTI ATGAA 9 cut(s) 37, 55, 89, 126, 264, 334, 1031, 1103, 1373
TspRI CASTG 1 cut(s) 985
Van91I CCANNNNNTGG 2 cut(s) 653, 1191
VpaK11BI GGWCC 1 cut(s) 356
XceI RCATGY 1 cut(s) 368
XcmI CCANNNNNNNNNTGG 1 cut(s) 297
XmiI GTMKAC 1 cut(s) 14
XspI CTAG 4 cut(s) 501, 519, 845, 882
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.