Belongs to the peptidase S10 family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g32490 |
| rosa_chinensis | RchiOBHm_Chr4g0441351 |
| rosa_laevigata | RLG00000006099 |
| rosa_multiflora | Rmu_co8458681.1_g000001 Rmu_sc0005516.1_g000007 |
| rosa_roxburghii | Rroxscaffold_5G00382240 |
| rosa_rugosa | Rorug04G0332500 |
| rosa_samantha | Rh4AG384600 Rh4BG398700 Rh4CG413800 |
| rosa_wichuraiana | Rw4G033200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 188, 455 |
| AatII | GACGTC | 1 cut(s) | 14 |
| Acc65I | GGTACC | 1 cut(s) | 777 |
| AccB1I | GGYRCC | 1 cut(s) | 777 |
| AccI | GTMKAC | 2 cut(s) | 8, 14 |
| AciI | CCGC | 5 cut(s) | 497, 509, 924, 1061, 1064 |
| AclWI | GGATC | 3 cut(s) | 366, 379, 467 |
| AcsI | RAATTY | 2 cut(s) | 420, 1186 |
| AcuI | CTGAAG | 2 cut(s) | 53, 87 |
| AcyI | GRCGYC | 1 cut(s) | 11 |
| AfaI | GTAC | 4 cut(s) | 533, 551, 779, 995 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 320, 327, 424, 545, 774, 787 |
| AgsI | TTSAA | 4 cut(s) | 311, 467, 1149, 1186 |
| AjnI | CCWGG | 1 cut(s) | 198 |
| Alw26I | GTCTC | 2 cut(s) | 408, 629 |
| AlwI | GGATC | 3 cut(s) | 366, 379, 467 |
| Ama87I | CYCGRG | 1 cut(s) | 391 |
| AoxI | GGCC | 2 cut(s) | 206, 248 |
| ApaI | GGGCCC | 1 cut(s) | 210 |
| ApeKI | GCWGC | 1 cut(s) | 396 |
| ApoI | RAATTY | 2 cut(s) | 420, 1186 |
| Asp718I | GGTACC | 1 cut(s) | 777 |
| AspLEI | GCGC | 1 cut(s) | 847 |
| AspS9I | GGNCC | 3 cut(s) | 206, 207, 248 |
| AsuC2I | CCSGG | 4 cut(s) | 210, 321, 376, 632 |
| AsuHPI | GGTGA | 2 cut(s) | 31, 1024 |
| AsuNHI | GCTAGC | 1 cut(s) | 736 |
| AvaI | CYCGRG | 1 cut(s) | 391 |
| BaeGI | GKGCMC | 2 cut(s) | 210, 650 |
| BamHI | GGATCC | 1 cut(s) | 371 |
| BanI | GGYRCC | 1 cut(s) | 777 |
| BanII | GRGCYC | 1 cut(s) | 210 |
| BbvI | GCAGC | 1 cut(s) | 408 |
| BccI | CCATC | 4 cut(s) | 50, 279, 700, 747 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 503, 537 |
| BciT130I | CCWGG | 1 cut(s) | 200 |
| BclI | TGATCA | 2 cut(s) | 289, 681 |
| BcnI | CCSGG | 4 cut(s) | 210, 321, 376, 632 |
| BcoDI | GTCTC | 2 cut(s) | 408, 629 |
| BfaI | CTAG | 2 cut(s) | 737, 1262 |
| BfmI | CTRYAG | 1 cut(s) | 609 |
| BfoI | RGCGCY | 1 cut(s) | 848 |
| BisI | GCNGC | 2 cut(s) | 397, 1062 |
| BlsI | GCNGC | 2 cut(s) | 398, 1063 |
| Bme1390I | CCNGG | 5 cut(s) | 200, 210, 321, 376, 632 |
| BmeT110I | CYCGRG | 1 cut(s) | 391 |
| BmgT120I | GGNCC | 3 cut(s) | 206, 207, 248 |
| BmiI | GGNNCC | 5 cut(s) | 197, 208, 332, 373, 779 |
| BmrFI | CCNGG | 5 cut(s) | 200, 210, 321, 376, 632 |
| BmsI | GCATC | 5 cut(s) | 203, 393, 751, 760, 1168 |
| BmtI | GCTAGC | 1 cut(s) | 740 |
| BpmI | CTGGAG | 1 cut(s) | 182 |
| BpuEI | CTTGAG | 1 cut(s) | 545 |
| BpuMI | CCSGG | 4 cut(s) | 210, 321, 376, 632 |
| BsaAI | YACGTR | 1 cut(s) | 535 |
| BsaBI | GATNNNNATC | 1 cut(s) | 288 |
| BsaHI | GRCGYC | 1 cut(s) | 11 |
| BsaI | GGTCTC | 1 cut(s) | 408 |
| BsaJI | CCNNGG | 3 cut(s) | 199, 251, 319 |
| BsaWI | WCCGGW | 1 cut(s) | 333 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 26 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 320, 327, 424, 545, 774, 787 |
| Bse118I | RCCGGY | 1 cut(s) | 1168 |
| Bse3DI | GCAATG | 5 cut(s) | 444, 1028, 1040, 1141, 1203 |
| Bse8I | GATNNNNATC | 1 cut(s) | 288 |
| BseBI | CCWGG | 1 cut(s) | 200 |
| BseDI | CCNNGG | 3 cut(s) | 199, 251, 319 |
| BseGI | GGATG | 2 cut(s) | 218, 1099 |
| BseJI | GATNNNNATC | 1 cut(s) | 288 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 320, 327, 424, 545, 774, 787 |
| BseMI | GCAATG | 5 cut(s) | 444, 1028, 1040, 1141, 1203 |
| BseMII | CTCAG | 3 cut(s) | 161, 653, 1205 |
| BseRI | GAGGAG | 5 cut(s) | 712, 932, 1033, 1055, 1084 |
| BseSI | GKGCMC | 2 cut(s) | 210, 650 |
| BseXI | GCAGC | 1 cut(s) | 408 |
| BsgI | GTGCAG | 1 cut(s) | 1133 |
| BshFI | GGCC | 2 cut(s) | 208, 250 |
| BshNI | GGYRCC | 1 cut(s) | 777 |
| BsiHKCI | CYCGRG | 1 cut(s) | 391 |
| BsiSI | CCGG | 6 cut(s) | 210, 321, 334, 375, 632, 1169 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 320, 327, 424, 545, 774, 787 |
| BsmAI | GTCTC | 2 cut(s) | 408, 629 |
| BsnI | GGCC | 2 cut(s) | 208, 250 |
| Bso31I | GGTCTC | 1 cut(s) | 408 |
| BsoBI | CYCGRG | 1 cut(s) | 391 |
| Bsp120I | GGGCCC | 1 cut(s) | 206 |
| Bsp1286I | GDGCHC | 2 cut(s) | 210, 650 |
| Bsp143I | GATC | 7 cut(s) | 243, 283, 289, 371, 472, 681, 1200 |
| BspACI | CCGC | 5 cut(s) | 497, 509, 924, 1061, 1064 |
| BspANI | GGCC | 2 cut(s) | 208, 250 |
| BspCNI | CTCAG | 3 cut(s) | 160, 652, 1204 |
| BspLI | GGNNCC | 5 cut(s) | 197, 208, 332, 373, 779 |
| BspOI | GCTAGC | 1 cut(s) | 740 |
| BspPI | GGATC | 3 cut(s) | 366, 379, 467 |
| BspQI | GCTCTTC | 1 cut(s) | 124 |
| BspT107I | GGYRCC | 1 cut(s) | 777 |
| BspTNI | GGTCTC | 1 cut(s) | 408 |
| BsrDI | GCAATG | 5 cut(s) | 444, 1028, 1040, 1141, 1203 |
| BsrFI | RCCGGY | 1 cut(s) | 1168 |
| BssAI | RCCGGY | 1 cut(s) | 1168 |
| BssECI | CCNNGG | 3 cut(s) | 199, 251, 319 |
| BssMI | GATC | 7 cut(s) | 243, 283, 289, 371, 472, 681, 1200 |
| BssNI | GRCGYC | 1 cut(s) | 11 |
| BssT1I | CCWWGG | 1 cut(s) | 251 |
| Bst2UI | CCWGG | 1 cut(s) | 200 |
| Bst4CI | ACNGT | 1 cut(s) | 100 |
| Bst6I | CTCTTC | 4 cut(s) | 124, 567, 1010, 1118 |
| BstACI | GRCGYC | 1 cut(s) | 11 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 662, 770, 1165 |
| BstBAI | YACGTR | 1 cut(s) | 535 |
| BstC8I | GCNNGC | 7 cut(s) | 511, 526, 540, 601, 738, 1101, 1170 |
| BstDEI | CTNAG | 3 cut(s) | 147, 639, 1191 |
| BstF5I | GGATG | 2 cut(s) | 218, 1099 |
| BstH2I | RGCGCY | 1 cut(s) | 848 |
| BstHHI | GCGC | 1 cut(s) | 847 |
| BstKTI | GATC | 7 cut(s) | 246, 286, 292, 374, 475, 684, 1203 |
| BstMAI | GTCTC | 2 cut(s) | 408, 629 |
| BstMBI | GATC | 7 cut(s) | 243, 283, 289, 371, 472, 681, 1200 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 525, 605, 662, 770, 1165 |
| BstNI | CCWGG | 1 cut(s) | 200 |
| BstNSI | RCATGY | 1 cut(s) | 260 |
| BstSCI | CCNGG | 5 cut(s) | 198, 208, 319, 374, 630 |
| BstSFI | CTRYAG | 1 cut(s) | 609 |
| BstSLI | GKGCMC | 2 cut(s) | 210, 650 |
| BstV1I | GCAGC | 1 cut(s) | 408 |
| BstX2I | RGATCY | 1 cut(s) | 371 |
| BstYI | RGATCY | 1 cut(s) | 371 |
| BsuRI | GGCC | 2 cut(s) | 208, 250 |
| BtgZI | GCGATG | 2 cut(s) | 370, 766 |
| BtsCI | GGATG | 2 cut(s) | 218, 1099 |
| BtsI | GCAGTG | 1 cut(s) | 933 |
| BtsIMutI | CAGTG | 2 cut(s) | 870, 933 |
| Cac8I | GCNNGC | 7 cut(s) | 511, 526, 540, 601, 738, 1101, 1170 |
| CfoI | GCGC | 1 cut(s) | 847 |
| Cfr10I | RCCGGY | 1 cut(s) | 1168 |
| Cfr13I | GGNCC | 3 cut(s) | 206, 207, 248 |
| Csp6I | GTAC | 4 cut(s) | 532, 550, 778, 994 |
| CviAII | CATG | 7 cut(s) | 238, 257, 805, 884, 947, 979, 997 |
| CviQI | GTAC | 4 cut(s) | 532, 550, 778, 994 |
| DdeI | CTNAG | 3 cut(s) | 147, 639, 1191 |
| DpnI | GATC | 7 cut(s) | 245, 285, 291, 373, 474, 683, 1202 |
| DpnII | GATC | 7 cut(s) | 243, 283, 289, 371, 472, 681, 1200 |
| Eam1104I | CTCTTC | 4 cut(s) | 124, 567, 1010, 1118 |
| EarI | CTCTTC | 4 cut(s) | 124, 567, 1010, 1118 |
| Eco130I | CCWWGG | 1 cut(s) | 251 |
| Eco24I | GRGCYC | 1 cut(s) | 210 |
| Eco31I | GGTCTC | 1 cut(s) | 408 |
| Eco57I | CTGAAG | 2 cut(s) | 53, 87 |
| Eco88I | CYCGRG | 1 cut(s) | 391 |
| EcoRI | GAATTC | 1 cut(s) | 1186 |
| EcoRII | CCWGG | 1 cut(s) | 198 |
| EcoT14I | CCWWGG | 1 cut(s) | 251 |
| EcoT38I | GRGCYC | 1 cut(s) | 210 |
| ErhI | CCWWGG | 1 cut(s) | 251 |
| FaeI | CATG | 7 cut(s) | 241, 260, 808, 887, 950, 982, 1000 |
| FatI | CATG | 7 cut(s) | 237, 256, 804, 883, 946, 978, 996 |
| FauI | CCCGC | 2 cut(s) | 502, 1057 |
| FbaI | TGATCA | 2 cut(s) | 289, 681 |
| FblI | GTMKAC | 2 cut(s) | 8, 14 |
| Fnu4HI | GCNGC | 2 cut(s) | 397, 1062 |
| FokI | GGATG | 2 cut(s) | 225, 1106 |
| FriOI | GRGCYC | 1 cut(s) | 210 |
| Fsp4HI | GCNGC | 2 cut(s) | 397, 1062 |
| FspBI | CTAG | 2 cut(s) | 737, 1262 |
| GlaI | GCGC | 1 cut(s) | 846 |
| GluI | GCNGC | 2 cut(s) | 397, 1062 |
| GsuI | CTGGAG | 1 cut(s) | 182 |
| HaeII | RGCGCY | 1 cut(s) | 848 |
| HaeIII | GGCC | 2 cut(s) | 208, 250 |
| HapII | CCGG | 6 cut(s) | 210, 321, 334, 375, 632, 1169 |
| HhaI | GCGC | 1 cut(s) | 847 |
| Hin1I | GRCGYC | 1 cut(s) | 11 |
| Hin1II | CATG | 7 cut(s) | 241, 260, 808, 887, 950, 982, 1000 |
| Hin6I | GCGC | 1 cut(s) | 845 |
| HinP1I | GCGC | 1 cut(s) | 845 |
| HincII | GTYRAC | 3 cut(s) | 9, 15, 103 |
| HindII | GTYRAC | 3 cut(s) | 9, 15, 103 |
| HindIII | AAGCTT | 2 cut(s) | 23, 69 |
| HinfI | GANTC | 6 cut(s) | 5, 575, 637, 859, 920, 1045 |
| HpaII | CCGG | 6 cut(s) | 210, 321, 334, 375, 632, 1169 |
| HphI | GGTGA | 2 cut(s) | 31, 1024 |
| Hpy166II | GTNNAC | 5 cut(s) | 9, 15, 103, 262, 1003 |
| Hpy188I | TCNGA | 6 cut(s) | 33, 67, 150, 720, 1050, 1256 |
| Hpy188III | TCNNGA | 6 cut(s) | 281, 287, 562, 898, 1149, 1262 |
| Hpy8I | GTNNAC | 5 cut(s) | 9, 15, 103, 262, 1003 |
| Hpy99I | CGWCG | 2 cut(s) | 13, 16 |
| HpyAV | CCTTC | 2 cut(s) | 229, 1199 |
| HpyCH4III | ACNGT | 1 cut(s) | 100 |
| HpyCH4IV | ACGT | 2 cut(s) | 11, 534 |
| HpyCH4V | TGCA | 6 cut(s) | 764, 773, 955, 1033, 1103, 1114 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 525, 605, 662, 770, 1165 |
| HpyF3I | CTNAG | 3 cut(s) | 147, 639, 1191 |
| HpySE526I | ACGT | 2 cut(s) | 11, 534 |
| Hsp92I | GRCGYC | 1 cut(s) | 11 |
| Hsp92II | CATG | 7 cut(s) | 241, 260, 808, 887, 950, 982, 1000 |
| HspAI | GCGC | 1 cut(s) | 845 |
| KpnI | GGTACC | 1 cut(s) | 781 |
| KroI | GCCGGC | 1 cut(s) | 1168 |
| KroNI | GCCGGC | 1 cut(s) | 1170 |
| Ksp22I | TGATCA | 2 cut(s) | 289, 681 |
| Kzo9I | GATC | 7 cut(s) | 243, 283, 289, 371, 472, 681, 1200 |
| LguI | GCTCTTC | 1 cut(s) | 124 |
| LmnI | GCTCC | 3 cut(s) | 201, 221, 1020 |
| Lsp1109I | GCAGC | 1 cut(s) | 408 |
| LweI | GCATC | 5 cut(s) | 203, 393, 751, 760, 1168 |
| MaeI | CTAG | 2 cut(s) | 737, 1262 |
| MaeII | ACGT | 2 cut(s) | 11, 534 |
| MaeIII | GTNAC | 2 cut(s) | 230, 868 |
| MalI | GATC | 7 cut(s) | 245, 285, 291, 373, 474, 683, 1202 |
| MboI | GATC | 7 cut(s) | 243, 283, 289, 371, 472, 681, 1200 |
| MfeI | CAATTG | 1 cut(s) | 1247 |
| MflI | RGATCY | 1 cut(s) | 371 |
| MhlI | GDGCHC | 2 cut(s) | 210, 650 |
| MluCI | AATT | 8 cut(s) | 136, 189, 420, 592, 903, 937, 1186, 1247 |
| MlyI | GAGTC | 5 cut(s) | 14, 584, 631, 853, 929 |
| MroNI | GCCGGC | 1 cut(s) | 1168 |
| MseI | TTAA | 4 cut(s) | 266, 591, 746, 1270 |
| MslI | CAYNNNNRTG | 2 cut(s) | 279, 1033 |
| MspI | CCGG | 6 cut(s) | 210, 321, 334, 375, 632, 1169 |
| MspR9I | CCNGG | 5 cut(s) | 200, 210, 321, 376, 632 |
| MunI | CAATTG | 1 cut(s) | 1247 |
| MvaI | CCWGG | 1 cut(s) | 200 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 525, 605, 662, 770, 1165 |
| NaeI | GCCGGC | 1 cut(s) | 1170 |
| NciI | CCSGG | 4 cut(s) | 210, 321, 376, 632 |
| NdeII | GATC | 7 cut(s) | 243, 283, 289, 371, 472, 681, 1200 |
| NgoMIV | GCCGGC | 1 cut(s) | 1168 |
| NheI | GCTAGC | 1 cut(s) | 736 |
| NlaIII | CATG | 7 cut(s) | 241, 260, 808, 887, 950, 982, 1000 |
| NlaIV | GGNNCC | 5 cut(s) | 197, 208, 332, 373, 779 |
| NmuCI | GTSAC | 1 cut(s) | 868 |
| NspI | RCATGY | 1 cut(s) | 260 |
| PaeR7I | CTCGAG | 1 cut(s) | 391 |
| PciSI | GCTCTTC | 1 cut(s) | 124 |
| PdiI | GCCGGC | 1 cut(s) | 1170 |
| PfeI | GAWTC | 1 cut(s) | 1045 |
| PkrI | GCNGC | 2 cut(s) | 398, 1063 |
| PleI | GAGTC | 5 cut(s) | 13, 583, 631, 853, 928 |
| PpsI | GAGTC | 5 cut(s) | 13, 583, 631, 853, 928 |
| Ppu21I | YACGTR | 1 cut(s) | 535 |
| PsiI | TTATAA | 2 cut(s) | 188, 455 |
| Psp6I | CCWGG | 1 cut(s) | 198 |
| PspGI | CCWGG | 1 cut(s) | 198 |
| PspN4I | GGNNCC | 5 cut(s) | 197, 208, 332, 373, 779 |
| PspOMI | GGGCCC | 1 cut(s) | 206 |
| PspPI | GGNCC | 3 cut(s) | 206, 207, 248 |
| PspXI | VCTCGAGB | 1 cut(s) | 391 |
| PsuI | RGATCY | 1 cut(s) | 371 |
| RsaI | GTAC | 4 cut(s) | 533, 551, 779, 995 |
| RsaNI | GTAC | 4 cut(s) | 532, 550, 778, 994 |
| RseI | CAYNNNNRTG | 2 cut(s) | 279, 1033 |
| SalI | GTCGAC | 2 cut(s) | 7, 13 |
| SapI | GCTCTTC | 1 cut(s) | 124 |
| SaqAI | TTAA | 4 cut(s) | 266, 591, 746, 1270 |
| SatI | GCNGC | 2 cut(s) | 397, 1062 |
| Sau3AI | GATC | 7 cut(s) | 243, 283, 289, 371, 472, 681, 1200 |
| Sau96I | GGNCC | 3 cut(s) | 206, 207, 248 |
| SchI | GAGTC | 5 cut(s) | 14, 584, 631, 853, 929 |
| ScrFI | CCNGG | 5 cut(s) | 200, 210, 321, 376, 632 |
| SduI | GDGCHC | 2 cut(s) | 210, 650 |
| SfaNI | GCATC | 5 cut(s) | 203, 393, 751, 760, 1168 |
| SfcI | CTRYAG | 1 cut(s) | 609 |
| Sfr274I | CTCGAG | 1 cut(s) | 391 |
| SlaI | CTCGAG | 1 cut(s) | 391 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 279, 1033 |
| SmlI | CTYRAG | 2 cut(s) | 391, 560 |
| SmoI | CTYRAG | 2 cut(s) | 391, 560 |
| Sse9I | AATT | 8 cut(s) | 136, 189, 420, 592, 903, 937, 1186, 1247 |
| SsiI | CCGC | 5 cut(s) | 497, 509, 924, 1061, 1064 |
| SspI | AATATT | 1 cut(s) | 480 |
| SspMI | CTAG | 2 cut(s) | 737, 1262 |
| StyD4I | CCNGG | 5 cut(s) | 198, 208, 319, 374, 630 |
| StyI | CCWWGG | 1 cut(s) | 251 |
| TaaI | ACNGT | 1 cut(s) | 100 |
| TaiI | ACGT | 2 cut(s) | 14, 537 |
| TaqI | TCGA | 4 cut(s) | 8, 14, 392, 1203 |
| TasI | AATT | 8 cut(s) | 136, 189, 420, 592, 903, 937, 1186, 1247 |
| TatI | WGTACW | 1 cut(s) | 993 |
| TauI | GCSGC | 1 cut(s) | 1064 |
| TfiI | GAWTC | 1 cut(s) | 1045 |
| Tru1I | TTAA | 4 cut(s) | 266, 591, 746, 1270 |
| Tru9I | TTAA | 4 cut(s) | 266, 591, 746, 1270 |
| TscAI | CASTG | 2 cut(s) | 877, 933 |
| TseFI | GTSAC | 1 cut(s) | 868 |
| TseI | GCWGC | 1 cut(s) | 396 |
| Tsp45I | GTSAC | 1 cut(s) | 868 |
| TspDTI | ATGAA | 8 cut(s) | 37, 43, 49, 156, 226, 585, 903, 995 |
| TspRI | CASTG | 2 cut(s) | 877, 933 |
| XapI | RAATTY | 2 cut(s) | 420, 1186 |
| XbaI | TCTAGA | 1 cut(s) | 1261 |
| XceI | RCATGY | 1 cut(s) | 260 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 189 |
| XhoI | CTCGAG | 1 cut(s) | 391 |
| XmiI | GTMKAC | 2 cut(s) | 8, 14 |
| XspI | CTAG | 2 cut(s) | 737, 1262 |
| ZraI | GACGTC | 1 cut(s) | 12 |