FvH4_5g02060

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0012922
Physical Location & Seq
Reverse (-)
1284557 .. 1289662
5106 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g02060.t1

Sequence Viewer

Length: 1989 bp
ATGAGAGCATTTGCCTCGTTACAGCTGCTGGGTTTGGTTTTTGGGGCTGTCTTTCTGGGTTGTGATTCGTTTCCATCAAAGGAAGTTTGGGCTCTTACAAATTTTAAGGAAGCTATATATGAAGACCCACATATGGTATTGTCGGATTGGAATTCCTTGGATTCGGATCCTTGTGCCTGGTCCGGCATTACATGCTCTATGACTCGAGATTATGTTATAAAGATTAACATTTCCGGTTCATCTATAAGGGGGTTTCTCGTACCAGACTTGGGTGAACTCACCCTCTTGCAAGAACTAACTTTGCATGGGAACAGGCTGCTTGGAATATTACCTAAGGAACTGGGTTTATTAAAATACCTGACCATCTTGGATTTGGGGTCAAATGAACTCACTGGTCCAATTCCACCGGAGCTCGGGAACTTGACCAACGTTGTGAAAATAAATCTCCAGTCAAATGGGTTGTCTGGTAAGCTACCTCCTGAACTTGGCAATTTGGGATACCTACAGGAACTTTATTTGGATAGGAATAAGCTTCAAGGAACTGTTCCTGCCGGTGGCAATAAAGGACTCACATCTAATACTTCTAAACTACATGGGATGTATGCCTCAAACGTGACGGGCCTTTGCCGCTCATCTCAGTTAAGAGTAGCAGATTTCTCATACAACTTCTTTGTGGGTAGCATACCTACATGTTTGGAGTATCTTCCCAGGTCAAGCTTTCAAGGAAATTGCCTCCAGAAACAAGAGCCGAAACAGCGTGCTGCAGATATGTGTGTTGGTGCTCCACCTTCAAAAGGCCATCCTGCAGTTAACCCAAAGCACAAACCTACTAAAAATGTCCCTAAACATTCAGATACGTCAAAACCAGCCTGGCTATTGGCTTTGGAAGTAGTGACAGGAACCATGGTGTGCTCTCTTGTTCTAGTTGCTGTTGTCACTGGGCTTCAGAAATGCAATAGCAAATCTTCTATAATAATTCCTTGGAAGAAATCAGGAAGTGTAAAGGACCACCATACTACAGTCTACATAGATTCCGAGATGTTGAAAGATGTTGCTAGATTCAACAGACAGGAGCTTGAAGTAGCTTGTGAAGACTTCAGCAATATTATTGGCTCTTCACCTGATAGTTTGGTTTACAAGGGCAACATGAAAGGTGGGCCAGAGATTGCTGTGATATCCCTTTGCATTAAGGAAGAGCATTGGACAGGCTATCTTGAGCTCTATTTTCAGAGAGAGGTGATAGATTTGTCAAGGTTGACTCACGAGAATACAGGGAAGTTGCTAGGTTATTGTAGTGAGAGCACCCCATTTACAAGGATGCTGGTTTTTGAATATGCTTCAAATGGGACACTGTATGAGCACCTCCATTATGGAGAAGGATGCCAGTTAAGTTGGACTAGGCGCATGAAAATTGTAATAGGTATTGCTCGGGGGCTGAAGTATCTCCACATGGAACTTGAGCCACCATTTACAATATCAGAGTTAAATTCTAGTGCTGTATATCTTACAGATGATTTTTTGCCCAAGCTGGTTGATTTTGAAAGTTGGAAGACAATCATTGCACGGGCAGAACAAAATTCAGGCTCTATTGGCAGCCAGGGTTCTATCTGTGTTATTCCAAATTCTATGGAAGCACGCCACCTGGATATTCAAGGCAATGTTTATGCTTTTGGGGTACTTCTACTGGAAATAATTAGTGGGAGGCCTCCATACTGCAAGGACAAGGGGTGCTTGGTAGACTGGGCCAAAGATTATCTTGAGCTGCCAGACGTGATGTCTCATGTGGTGGATCCTGAATTGAAGCATTTCAGTTGTGATGACCTCAAGGTTCTATGTGATGTGGTAAATCTCTGTATCCATCCAGAACCCTCCAAGCGACCATCGATGCAGGAAGTATGCACCATGTTGGAGAGCAAAATTGACACATCGGTGTCGCTTGAGCTTAAAGCATCTTCTCTGGCATGGGCTGAGCTTGCACTTTCATCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase_Tyr

Protein Analysis

663

Amino Acids

73.07

Weight (kDa)

5.9

Isoelectric Point (pI)

32.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 27 - 66 2.6e-10 Leucine rich repeat N-terminal domain
PK_Tyr_Ser-Thr PF07714 368 - 635 7e-19 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 370 - 634 4.1e-13 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012922)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G63430 AT1G63430 AT1G63430
fragaria_vesca FvH4_5g02060
malus_domestica MD06G1079300.v1.1 MD14G1101900.v1.1
prunus_persica Prupe.5G097500_v2.0.a1
pyrus_communis pycom06g07640 pycom14g09870
rosa_chinensis RchiOBHm_Chr7g0198241
rosa_laevigata RLG00000003881
rosa_multiflora Rmu_sc0001250.1_g000046
rosa_roxburghii Rroxscaffold_3G00257900
rosa_rugosa Rorug07G0046100
rosa_samantha Rh7BG172900 Rh7CG179400 Rh7DG172200
rosa_wichuraiana Rw7G014840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 218
AccBSI CCGCTC 1 cut(s) 630
AccI GTMKAC 2 cut(s) 1023, 1737
AciI CCGC 1 cut(s) 628
AclI AACGTT 1 cut(s) 429
AclWI GGATC 4 cut(s) 161, 174, 1784, 1797
AcsI RAATTY 5 cut(s) 100, 151, 1486, 1576, 1621
AcuI CTGAAG 3 cut(s) 929, 1081, 1457
AfaI GTAC 2 cut(s) 261, 1677
AfiI CCNNNNNNNGG 6 cut(s) 133, 269, 413, 485, 554, 794
AflIII ACRYGT 1 cut(s) 689
AhdI GACNNNNNGTC 1 cut(s) 1774
AjiI CACGTC 1 cut(s) 1771
AjnI CCWGG 5 cut(s) 176, 707, 869, 1596, 1641
AleI CACNNNNGTG 1 cut(s) 1928
Alw21I GWGCWC 6 cut(s) 414, 784, 914, 1221, 1304, 1362
Alw26I GTCTC 1 cut(s) 1782
AlwI GGATC 4 cut(s) 161, 174, 1784, 1797
AlwNI CAGNNNCTG 1 cut(s) 28
Ama87I CYCGRG 3 cut(s) 204, 413, 1428
AoxI GGCC 5 cut(s) 619, 796, 1157, 1703, 1743
ApeKI GCWGC 5 cut(s) 25, 316, 761, 1593, 1762
ApoI RAATTY 5 cut(s) 100, 151, 1486, 1576, 1621
ArsI GACNNNNNNTTYG 2 cut(s) 446, 478
Asp700I GAANNNNTTC 1 cut(s) 1805
AspLEI GCGC 1 cut(s) 1404
AspS9I GGNCC 6 cut(s) 180, 395, 619, 1006, 1157, 1743
AsuHPI GGTGA 4 cut(s) 271, 284, 1110, 1249
AvaI CYCGRG 3 cut(s) 204, 413, 1428
AvaII GGWCC 3 cut(s) 180, 395, 1006
AxyI CCTNAGG 1 cut(s) 333
BamHI GGATCC 2 cut(s) 166, 1789
BanII GRGCYC 3 cut(s) 94, 414, 1221
BauI CACGAG 1 cut(s) 1262
BbsI GAAGAC 3 cut(s) 129, 1098, 1556
Bbv12I GWGCWC 6 cut(s) 414, 784, 914, 1221, 1304, 1362
BbvI GCAGC 5 cut(s) 12, 303, 748, 1605, 1749
BccI CCATC 5 cut(s) 82, 371, 807, 1866, 1888
BcgI CGANNNNNNTGC 1 cut(s) 31
BciT130I CCWGG 5 cut(s) 178, 709, 871, 1598, 1643
BciVI GTATCC 2 cut(s) 491, 1865
BcoDI GTCTC 1 cut(s) 1782
BfaI CTAG 5 cut(s) 923, 1056, 1283, 1398, 1491
BfmI CTRYAG 4 cut(s) 503, 762, 804, 1017
BfuI GTATCC 2 cut(s) 491, 1865
BisI GCNGC 6 cut(s) 26, 317, 628, 762, 1594, 1763
BlpI GCTNAGC 1 cut(s) 1968
BlsI GCNGC 6 cut(s) 27, 318, 629, 763, 1595, 1764
Bme1390I CCNGG 5 cut(s) 178, 709, 871, 1598, 1643
Bme18I GGWCC 3 cut(s) 180, 395, 1006
BmeRI GACNNNNNGTC 1 cut(s) 1774
BmeT110I CYCGRG 3 cut(s) 204, 413, 1428
BmgBI CACGTC 1 cut(s) 1771
BmgT120I GGNCC 6 cut(s) 180, 395, 619, 1006, 1157, 1743
BmiI GGNNCC 3 cut(s) 168, 901, 1791
BmrFI CCNGG 5 cut(s) 178, 709, 871, 1598, 1643
BmrI ACTGGG 3 cut(s) 350, 948, 1750
BmsI GCATC 4 cut(s) 1308, 1370, 1875, 1958
BmuI ACTGGG 3 cut(s) 350, 948, 1750
BpiI GAAGAC 3 cut(s) 129, 1098, 1556
BpmI CTGGAG 2 cut(s) 431, 719
Bpu1102I GCTNAGC 1 cut(s) 1968
BpuEI CTTGAG 5 cut(s) 1235, 1478, 1778, 1808, 1958
Bsa29I ATCGAT 1 cut(s) 1883
BsaBI GATNNNNATC 1 cut(s) 165
BsaJI CCNNGG 5 cut(s) 156, 707, 903, 980, 1597
BsaWI WCCGGW 2 cut(s) 233, 406
Bsc4I CCNNNNNNNGG 6 cut(s) 133, 269, 413, 485, 554, 794
Bse118I RCCGGY 1 cut(s) 551
Bse1I ACTGG 7 cut(s) 345, 397, 448, 943, 1384, 1689, 1745
Bse21I CCTNAGG 1 cut(s) 333
Bse3DI GCAATG 2 cut(s) 1557, 1663
Bse8I GATNNNNATC 1 cut(s) 165
BseBI CCWGG 5 cut(s) 178, 709, 871, 1598, 1643
BseCI ATCGAT 1 cut(s) 1883
BseDI CCNNGG 5 cut(s) 156, 707, 903, 980, 1597
BseGI GGATG 6 cut(s) 603, 799, 1323, 1385, 1858, 1982
BseJI GATNNNNATC 1 cut(s) 165
BseLI CCNNNNNNNGG 6 cut(s) 133, 269, 413, 485, 554, 794
BseMI GCAATG 2 cut(s) 1557, 1663
BseMII CTCAG 2 cut(s) 650, 1959
BseNI ACTGG 7 cut(s) 345, 397, 448, 943, 1384, 1689, 1745
BseXI GCAGC 5 cut(s) 12, 303, 748, 1605, 1749
BseYI CCCAGC 1 cut(s) 28
BshFI GGCC 5 cut(s) 621, 798, 1159, 1705, 1745
BshVI ATCGAT 1 cut(s) 1883
BsiHKAI GWGCWC 6 cut(s) 414, 784, 914, 1221, 1304, 1362
BsiHKCI CYCGRG 3 cut(s) 204, 413, 1428
BsiSI CCGG 4 cut(s) 183, 234, 407, 552
BslFI GGGAC 2 cut(s) 824, 1360
BslI CCNNNNNNNGG 6 cut(s) 133, 269, 413, 485, 554, 794
BsmAI GTCTC 1 cut(s) 1782
BsmFI GGGAC 2 cut(s) 824, 1360
BsnI GGCC 5 cut(s) 621, 798, 1159, 1705, 1745
BsoBI CYCGRG 3 cut(s) 204, 413, 1428
Bsp1286I GDGCHC 7 cut(s) 94, 414, 784, 914, 1221, 1304, 1362
Bsp143I GATC 2 cut(s) 166, 1789
Bsp1720I GCTNAGC 1 cut(s) 1968
Bsp19I CCATGG 1 cut(s) 903
BspACI CCGC 1 cut(s) 628
BspANI GGCC 5 cut(s) 621, 798, 1159, 1705, 1745
BspCNI CTCAG 2 cut(s) 649, 1960
BspDI ATCGAT 1 cut(s) 1883
BspLI GGNNCC 3 cut(s) 168, 901, 1791
BspMAI CTGCAG 2 cut(s) 766, 808
BspPI GGATC 4 cut(s) 161, 174, 1784, 1797
BspQI GCTCTTC 2 cut(s) 1120, 1188
BsrBI CCGCTC 1 cut(s) 630
BsrDI GCAATG 2 cut(s) 1557, 1663
BsrFI RCCGGY 1 cut(s) 551
BsrI ACTGG 7 cut(s) 345, 397, 448, 943, 1384, 1689, 1745
BssAI RCCGGY 1 cut(s) 551
BssECI CCNNGG 5 cut(s) 156, 707, 903, 980, 1597
BssMI GATC 2 cut(s) 166, 1789
BssSI CACGAG 1 cut(s) 1262
BssT1I CCWWGG 3 cut(s) 156, 903, 980
Bst2BI CACGAG 1 cut(s) 1262
Bst2UI CCWGG 5 cut(s) 178, 709, 871, 1598, 1643
Bst4CI ACNGT 3 cut(s) 544, 1021, 1353
Bst6I CTCTTC 2 cut(s) 1120, 1188
BstAPI GCANNNNNTGC 1 cut(s) 192
BstC8I GCNNGC 3 cut(s) 759, 1636, 1974
BstDEI CTNAG 3 cut(s) 333, 636, 1968
BstDSI CCRYGG 1 cut(s) 903
BstENI CCTNNNNNAGG 1 cut(s) 792
BstF5I GGATG 6 cut(s) 603, 799, 1323, 1385, 1858, 1982
BstHHI GCGC 1 cut(s) 1404
BstKTI GATC 2 cut(s) 169, 1792
BstMAI GTCTC 1 cut(s) 1782
BstMBI GATC 2 cut(s) 166, 1789
BstMWI GCNNNNNNNGC 5 cut(s) 192, 627, 754, 1590, 1973
BstNI CCWGG 5 cut(s) 178, 709, 871, 1598, 1643
BstNSI RCATGY 2 cut(s) 195, 693
BstSCI CCNGG 5 cut(s) 176, 707, 869, 1596, 1641
BstSFI CTRYAG 4 cut(s) 503, 762, 804, 1017
BstV1I GCAGC 5 cut(s) 12, 303, 748, 1605, 1749
BstV2I GAAGAC 3 cut(s) 129, 1098, 1556
BstX2I RGATCY 2 cut(s) 166, 1789
BstXI CCANNNNNNTGG 1 cut(s) 455
BstYI RGATCY 2 cut(s) 166, 1789
Bsu15I ATCGAT 1 cut(s) 1883
Bsu36I CCTNAGG 1 cut(s) 333
BsuI GTATCC 2 cut(s) 491, 1865
BsuRI GGCC 5 cut(s) 621, 798, 1159, 1705, 1745
BsuTUI ATCGAT 1 cut(s) 1883
BtgI CCRYGG 1 cut(s) 903
BtrI CACGTC 1 cut(s) 1771
BtsCI GGATG 6 cut(s) 603, 799, 1323, 1385, 1858, 1982
BtsIMutI CAGTG 3 cut(s) 390, 936, 1349
Cac8I GCNNGC 3 cut(s) 759, 1636, 1974
CaiI CAGNNNCTG 1 cut(s) 28
CfoI GCGC 1 cut(s) 1404
Cfr10I RCCGGY 1 cut(s) 551
Cfr13I GGNCC 6 cut(s) 180, 395, 619, 1006, 1157, 1743
ClaI ATCGAT 1 cut(s) 1883
Csp6I GTAC 2 cut(s) 260, 1676
CviQI GTAC 2 cut(s) 260, 1676
DdeI CTNAG 3 cut(s) 333, 636, 1968
DpnI GATC 2 cut(s) 168, 1791
DpnII GATC 2 cut(s) 166, 1789
DriI GACNNNNNGTC 1 cut(s) 1774
Eam1104I CTCTTC 2 cut(s) 1120, 1188
Eam1105I GACNNNNNGTC 1 cut(s) 1774
EarI CTCTTC 2 cut(s) 1120, 1188
Ecl136II GAGCTC 2 cut(s) 412, 1219
Eco130I CCWWGG 3 cut(s) 156, 903, 980
Eco147I AGGCCT 1 cut(s) 1705
Eco24I GRGCYC 3 cut(s) 94, 414, 1221
Eco32I GATATC 1 cut(s) 1176
Eco47I GGWCC 3 cut(s) 180, 395, 1006
Eco53kI GAGCTC 2 cut(s) 412, 1219
Eco57I CTGAAG 3 cut(s) 929, 1081, 1457
Eco81I CCTNAGG 1 cut(s) 333
Eco88I CYCGRG 3 cut(s) 204, 413, 1428
EcoICRI GAGCTC 2 cut(s) 412, 1219
EcoNI CCTNNNNNAGG 1 cut(s) 792
EcoRI GAATTC 1 cut(s) 151
EcoRII CCWGG 5 cut(s) 176, 707, 869, 1596, 1641
EcoRV GATATC 1 cut(s) 1176
EcoT14I CCWWGG 3 cut(s) 156, 903, 980
EcoT38I GRGCYC 3 cut(s) 94, 414, 1221
ErhI CCWWGG 3 cut(s) 156, 903, 980
FalI AAGNNNNNCTT 4 cut(s) 1715, 1747, 1740, 1772
FaqI GGGAC 2 cut(s) 824, 1360
FauNDI CATATG 1 cut(s) 132
FblI GTMKAC 2 cut(s) 1023, 1737
Fnu4HI GCNGC 6 cut(s) 26, 317, 628, 762, 1594, 1763
FokI GGATG 6 cut(s) 610, 786, 1330, 1392, 1845, 1969
FriOI GRGCYC 3 cut(s) 94, 414, 1221
Fsp4HI GCNGC 6 cut(s) 26, 317, 628, 762, 1594, 1763
FspBI CTAG 5 cut(s) 923, 1056, 1283, 1398, 1491
GlaI GCGC 1 cut(s) 1403
GluI GCNGC 6 cut(s) 26, 317, 628, 762, 1594, 1763
GsaI CCCAGC 1 cut(s) 32
GsuI CTGGAG 2 cut(s) 431, 719
HaeIII GGCC 5 cut(s) 621, 798, 1159, 1705, 1745
HapII CCGG 4 cut(s) 183, 234, 407, 552
HhaI GCGC 1 cut(s) 1404
Hin6I GCGC 1 cut(s) 1402
HinP1I GCGC 1 cut(s) 1402
HincII GTYRAC 2 cut(s) 811, 1257
HindII GTYRAC 2 cut(s) 811, 1257
HindIII AAGCTT 2 cut(s) 530, 715
HinfI GANTC 7 cut(s) 65, 161, 202, 567, 1031, 1059, 1258
HpaI GTTAAC 1 cut(s) 811
HpaII CCGG 4 cut(s) 183, 234, 407, 552
HphI GGTGA 4 cut(s) 271, 284, 1110, 1249
Hpy166II GTNNAC 6 cut(s) 275, 811, 1024, 1135, 1257, 1738
Hpy188I TCNGA 7 cut(s) 145, 166, 853, 948, 1036, 1230, 1480
Hpy8I GTNNAC 6 cut(s) 275, 811, 1024, 1135, 1257, 1738
HpyAV CCTTC 2 cut(s) 798, 1370
HpyCH4III ACNGT 3 cut(s) 544, 1021, 1353
HpyCH4IV ACGT 4 cut(s) 429, 612, 857, 1770
HpyF10VI GCNNNNNNNGC 5 cut(s) 192, 627, 754, 1590, 1973
HpyF3I CTNAG 3 cut(s) 333, 636, 1968
HpySE526I ACGT 4 cut(s) 429, 612, 857, 1770
HspAI GCGC 1 cut(s) 1402
KspAI GTTAAC 1 cut(s) 811
Kzo9I GATC 2 cut(s) 166, 1789
LguI GCTCTTC 2 cut(s) 1120, 1188
LmnI GCTCC 3 cut(s) 409, 787, 1072
Lsp1109I GCAGC 5 cut(s) 12, 303, 748, 1605, 1749
LweI GCATC 4 cut(s) 1308, 1370, 1875, 1958
MaeI CTAG 5 cut(s) 923, 1056, 1283, 1398, 1491
MaeII ACGT 4 cut(s) 429, 612, 857, 1770
MaeIII GTNAC 4 cut(s) 18, 613, 892, 934
MalI GATC 2 cut(s) 168, 1791
MbiI CCGCTC 1 cut(s) 630
MboI GATC 2 cut(s) 166, 1789
MboII GAAGA 9 cut(s) 134, 695, 957, 997, 1103, 1107, 1205, 1561, 1944
MflI RGATCY 2 cut(s) 166, 1789
MhlI GDGCHC 7 cut(s) 94, 414, 784, 914, 1221, 1304, 1362
MlyI GAGTC 3 cut(s) 196, 561, 1252
MmeI TCCRAC 4 cut(s) 123, 1373, 1526, 1887
MroXI GAANNNNTTC 1 cut(s) 1805
MseI TTAA 9 cut(s) 105, 225, 350, 641, 810, 1188, 1388, 1484, 1944
MslI CAYNNNNRTG 1 cut(s) 1928
MspA1I CMGCKG 1 cut(s) 25
MspI CCGG 4 cut(s) 183, 234, 407, 552
MspR9I CCNGG 5 cut(s) 178, 709, 871, 1598, 1643
MvaI CCWGG 5 cut(s) 178, 709, 871, 1598, 1643
MwoI GCNNNNNNNGC 5 cut(s) 192, 627, 754, 1590, 1973
NcoI CCATGG 1 cut(s) 903
NdeI CATATG 1 cut(s) 132
NdeII GATC 2 cut(s) 166, 1789
NlaIV GGNNCC 3 cut(s) 168, 901, 1791
NmuCI GTSAC 3 cut(s) 613, 892, 934
NspI RCATGY 2 cut(s) 195, 693
OliI CACNNNNGTG 1 cut(s) 1928
PaeR7I CTCGAG 1 cut(s) 204
PceI AGGCCT 1 cut(s) 1705
PciI ACATGT 1 cut(s) 689
PciSI GCTCTTC 2 cut(s) 1120, 1188
PdmI GAANNNNTTC 1 cut(s) 1805
PfeI GAWTC 4 cut(s) 65, 161, 1031, 1059
PkrI GCNGC 6 cut(s) 27, 318, 629, 763, 1595, 1764
PleI GAGTC 3 cut(s) 196, 561, 1252
PpsI GAGTC 3 cut(s) 196, 561, 1252
PscI ACATGT 1 cut(s) 689
PsiI TTATAA 1 cut(s) 218
Psp124BI GAGCTC 2 cut(s) 414, 1221
Psp1406I AACGTT 1 cut(s) 429
Psp6I CCWGG 5 cut(s) 176, 707, 869, 1596, 1641
PspFI CCCAGC 1 cut(s) 28
PspGI CCWGG 5 cut(s) 176, 707, 869, 1596, 1641
PspN4I GGNNCC 3 cut(s) 168, 901, 1791
PspPI GGNCC 6 cut(s) 180, 395, 619, 1006, 1157, 1743
PstI CTGCAG 2 cut(s) 766, 808
PstNI CAGNNNCTG 1 cut(s) 28
PsuI RGATCY 2 cut(s) 166, 1789
PvuII CAGCTG 1 cut(s) 25
RsaI GTAC 2 cut(s) 261, 1677
RsaNI GTAC 2 cut(s) 260, 1676
RseI CAYNNNNRTG 1 cut(s) 1928
SacI GAGCTC 2 cut(s) 414, 1221
SapI GCTCTTC 2 cut(s) 1120, 1188
SaqAI TTAA 9 cut(s) 105, 225, 350, 641, 810, 1188, 1388, 1484, 1944
SatI GCNGC 6 cut(s) 26, 317, 628, 762, 1594, 1763
Sau3AI GATC 2 cut(s) 166, 1789
Sau96I GGNCC 6 cut(s) 180, 395, 619, 1006, 1157, 1743
SchI GAGTC 3 cut(s) 196, 561, 1252
ScrFI CCNGG 5 cut(s) 178, 709, 871, 1598, 1643
SduI GDGCHC 7 cut(s) 94, 414, 784, 914, 1221, 1304, 1362
SfaNI GCATC 4 cut(s) 1308, 1370, 1875, 1958
SfcI CTRYAG 4 cut(s) 503, 762, 804, 1017
Sfr274I CTCGAG 1 cut(s) 204
SinI GGWCC 3 cut(s) 180, 395, 1006
SlaI CTCGAG 1 cut(s) 204
SmiMI CAYNNNNRTG 1 cut(s) 1928
SmlI CTYRAG 6 cut(s) 204, 1214, 1457, 1757, 1823, 1937
SmoI CTYRAG 6 cut(s) 204, 1214, 1457, 1757, 1823, 1937
SseBI AGGCCT 1 cut(s) 1705
SsiI CCGC 1 cut(s) 628
SspI AATATT 2 cut(s) 327, 1105
SspMI CTAG 5 cut(s) 923, 1056, 1283, 1398, 1491
SstI GAGCTC 2 cut(s) 414, 1221
StuI AGGCCT 1 cut(s) 1705
StyD4I CCNGG 5 cut(s) 176, 707, 869, 1596, 1641
StyI CCWWGG 3 cut(s) 156, 903, 980
TaaI ACNGT 3 cut(s) 544, 1021, 1353
TaiI ACGT 4 cut(s) 432, 615, 860, 1773
TaqI TCGA 2 cut(s) 205, 1883
TauI GCSGC 1 cut(s) 630
TfiI GAWTC 4 cut(s) 65, 161, 1031, 1059
Tru1I TTAA 9 cut(s) 105, 225, 350, 641, 810, 1188, 1388, 1484, 1944
Tru9I TTAA 9 cut(s) 105, 225, 350, 641, 810, 1188, 1388, 1484, 1944
TscAI CASTG 3 cut(s) 397, 943, 1356
TseFI GTSAC 3 cut(s) 613, 892, 934
TseI GCWGC 5 cut(s) 25, 316, 761, 1593, 1762
Tsp45I GTSAC 3 cut(s) 613, 892, 934
TspDTI ATGAA 6 cut(s) 135, 228, 399, 1163, 1421, 1971
TspRI CASTG 3 cut(s) 397, 943, 1356
VpaK11BI GGWCC 3 cut(s) 180, 395, 1006
XagI CCTNNNNNAGG 1 cut(s) 792
XapI RAATTY 5 cut(s) 100, 151, 1486, 1576, 1621
XceI RCATGY 2 cut(s) 195, 693
XcmI CCANNNNNNNNNTGG 1 cut(s) 370
XhoI CTCGAG 1 cut(s) 204
XmiI GTMKAC 2 cut(s) 1023, 1737
XmnI GAANNNNTTC 1 cut(s) 1805
XspI CTAG 5 cut(s) 923, 1056, 1283, 1398, 1491
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.