MD06G1079300.v1.1

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
OG0012922
Physical Location & Seq
Forward (+)
19520153 .. 19525323
5171 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1079300.v1.1.491

Sequence Viewer

Length: 1986 bp
ATGAGAGGTTTTGCCTCCTTTCAGCTTCTGTGCTGCTTGATAGCTGGGGTTCTTTTTGTGGGATGTGAATCTTTTGGTTCACATGAAGTTTGGGCCCTTACAACGTTTAAGGAAGCGATATATGAAGACCCGCATCTGGTTTTGTCCAATTGGAATGCCTTGGATGCCGATCCTTGTGCCTGGTCCGGCATCACATGTTCTGTGGCTCGAGACCATGTTATAAAAATTAATATTTCCAGTTCATCAATAAGGGGATTTCTTGTACCAGACTTGGGTCAGCTCAGCTTCTTGCAAGAACTAACTCTGCATGGGAACAGGCTGCTTGGGATAATACCTAAAGAGTTGGGCTTGTTAAAATACCTCACGGTCTTGGACTTGGGGGCGAATGAACTCACTGGTCCAATTCCTCCAGAGCTTGGGAATTTAACCAGTGTTGTGAAAATAAATCTTCAGTCAAATGGGTTGTCTGGTCGGCTACCTCCTGAACTTGGCAATTTGGGACACCTTGAGGAACTTTGTTTAGATAGGAATAAGCTTCAAGGAACCGTTCCAGCCAATGGAGATACAGGACTCCCATCTAACTTACATGGAATGTATGCCTCAACTTCAAACATAACAGGCCTCTGTCGATCATCTCAGTTAAAAGTTGCAGACTTCTCGTACAACTTCTTTGTTGGTAGCATACCTGAGTGCTTGGAGTATCTTCCCAGGACAAGTTTTCAAGGAAATTGTCTCCAGAAACAGGATCCCAAGCAGCGTCCTGCAGAACTATGTGCTGGTGTGCCCCCTTCGAAAGGCCATCCCGGAAGTAACCCACAGCATAAACCTGCTAAAGAGGTCTCCAAACATCGGGAGGCTTCAAAACCTGCCTGGCTTTTGGCTCTGGAAATAGTGACTGGAACCATGGTGTGTTCGCTCTTTCTAGTTGCTGTTTTCACTGCTGTTCAGAAATGCAATAGCAAATCATCTATCATAATTCCTTGGAAGAAATCATCAAGTGAAAAGGACCATATCGCAGTCTACATAGATTCCGAGATGTTGAAAGATGTTGCCAGATTCAGCAGGCAAGAGCTAGAGGTTGCGTGTGAAGACTTTAGCAACATTATTGGTTCCTCACCTGACAGTTTGGTATACAAAGGCAACATAAAAGGTGGGCCTGAGATTGCTGTGATATCCTTTTGCATTAAGGAAGAGCATTGGACGAGCTATCTTGAAGTTTATTTTCAGCGAGAGGTGACAGATTTGGCAAGATTAAATCACGAAAATGCAGCAAAATTATTGGGTTATTGTAATGAGAGTGCCCCTTTTACGAGGATGCTGGTTTTTGAATATGCTTCAAATGGGACACTGTATGAGCACCTCCATTTTGGAGAGGGATGCCAGTTAAGTTGGACACGGCGCATGAAAATTATTATAGGCATTGCTCAGGGACTCAAGTATTTTCACTCGGAACTTGAGCCACCATTTACCATATCAGAGTTGAATTCTAGTGCTGTATATCTTACAGAACATTTTTTACCCAAGCTGGTTGATTTTGAAAGTTGGAAGACAATTCTTGCGAGGTCAGAAAAGAAGTTGGGCTCTATTAGCGGCCAAGGTGCTATTTGTGTCCTTCCGAATTCTATGGAAGCACGCCACCTGGATGTTAAAGGCAATGTCTATGCTTTCGGCATTCTTTTACTTGAAATAATAAGCGGGAGGCCTCCATTCTGCAAGGATAAGGGGTGCTTGATAGACTGGGCGAAAGACTATCTTGAGCTGCCAGATGTGATGTCGTACGTTGTTGATCCTGAACTGAAACATTTCAGTTATGATGATCTCAAAGTTCTATGTGATGTGGTGAATCTTTGCACCCATCCTGACCCCACCAAGCGGCCTTCGATGCAGGAACTATGCACCATGTTGGAGAGCAAAATCGACACATCAGTTTCGGCTGAGCTCAAGGCGTCTAATCTAGCATGGGCGGAGCTTGCACTGTCGTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase_Tyr

Protein Analysis

662

Amino Acids

73.0

Weight (kDa)

5.79

Isoelectric Point (pI)

35.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 29 - 67 5.5e-10 Leucine rich repeat N-terminal domain
PK_Tyr_Ser-Thr PF07714 367 - 634 3.3e-19 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 369 - 633 1.2e-15 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012922)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G63430 AT1G63430 AT1G63430
fragaria_vesca FvH4_5g02060
malus_domestica MD06G1079300.v1.1 MD14G1101900.v1.1
prunus_persica Prupe.5G097500_v2.0.a1
pyrus_communis pycom06g07640 pycom14g09870
rosa_chinensis RchiOBHm_Chr7g0198241
rosa_laevigata RLG00000003881
rosa_multiflora Rmu_sc0001250.1_g000046
rosa_roxburghii Rroxscaffold_3G00257900
rosa_rugosa Rorug07G0046100
rosa_samantha Rh7BG172900 Rh7CG179400 Rh7DG172200
rosa_wichuraiana Rw7G014840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 221
Acc36I ACCTGC 2 cut(s) 835, 874
AccB7I CCANNNNNTGG 2 cut(s) 416, 557
AccI GTMKAC 2 cut(s) 1020, 1131
AciI CCGC 5 cut(s) 131, 1590, 1695, 1873, 1964
AclI AACGTT 1 cut(s) 104
AclWI GGATC 4 cut(s) 164, 740, 753, 1781
AcoI YGGCCR 1 cut(s) 1591
AcsI RAATTY 3 cut(s) 421, 1483, 1618
AcuI CTGAAG 1 cut(s) 434
AcyI GRCGYC 1 cut(s) 1946
AfaI GTAC 3 cut(s) 264, 662, 1778
AfiI CCNNNNNNNGG 9 cut(s) 136, 272, 416, 488, 557, 742, 794, 849, 1872
AflIII ACRYGT 1 cut(s) 194
AjnI CCWGG 4 cut(s) 179, 707, 869, 1638
Alw21I GWGCWC 2 cut(s) 1359, 1941
Alw26I GTCTC 3 cut(s) 204, 737, 844
AlwI GGATC 4 cut(s) 164, 740, 753, 1781
AlwNI CAGNNNCTG 1 cut(s) 28
Ama87I CYCGRG 1 cut(s) 207
AoxI GGCC 7 cut(s) 93, 619, 796, 1154, 1591, 1700, 1874
ApaI GGGCCC 1 cut(s) 97
ApeKI GCWGC 5 cut(s) 33, 319, 754, 1268, 1759
ApoI RAATTY 3 cut(s) 421, 1483, 1618
ArsI GACNNNNNNTTYG 2 cut(s) 449, 481
AseI ATTAAT 1 cut(s) 228
Asp700I GAANNNNTTC 1 cut(s) 1802
AspLEI GCGC 1 cut(s) 1401
AspS9I GGNCC 6 cut(s) 93, 94, 183, 398, 1006, 1154
AsuC2I CCSGG 1 cut(s) 804
AsuHPI GGTGA 3 cut(s) 1107, 1246, 1852
AsuII TTCGAA 1 cut(s) 791
AvaI CYCGRG 1 cut(s) 207
AvaII GGWCC 3 cut(s) 183, 398, 1006
BaeGI GKGCMC 3 cut(s) 97, 786, 1303
BamHI GGATCC 1 cut(s) 745
BanII GRGCYC 3 cut(s) 97, 1583, 1941
BbsI GAAGAC 3 cut(s) 132, 1095, 1553
Bbv12I GWGCWC 2 cut(s) 1359, 1941
BbvI GCAGC 5 cut(s) 20, 306, 766, 1280, 1746
BccI CCATC 3 cut(s) 583, 807, 1863
BceAI ACGGC 1 cut(s) 1412
BcgI CGANNNNNNTGC 4 cut(s) 158, 192, 639, 673
BciT130I CCWGG 4 cut(s) 181, 709, 871, 1640
BcnI CCSGG 1 cut(s) 804
BcoDI GTCTC 3 cut(s) 204, 737, 844
BfaI CTAG 4 cut(s) 923, 1073, 1488, 1955
BfmI CTRYAG 1 cut(s) 762
BfuAI ACCTGC 2 cut(s) 835, 874
BisI GCNGC 7 cut(s) 34, 320, 755, 1269, 1591, 1760, 1874
BlpI GCTNAGC 2 cut(s) 281, 1935
BlsI GCNGC 7 cut(s) 35, 321, 756, 1270, 1592, 1761, 1875
Bme1390I CCNGG 5 cut(s) 181, 709, 804, 871, 1640
Bme18I GGWCC 3 cut(s) 183, 398, 1006
BmeT110I CYCGRG 1 cut(s) 207
BmgT120I GGNCC 6 cut(s) 93, 94, 183, 398, 1006, 1154
BmiI GGNNCC 5 cut(s) 95, 544, 747, 901, 1111
BmrFI CCNGG 5 cut(s) 181, 709, 804, 871, 1640
BmrI ACTGGG 1 cut(s) 1747
BmsI GCATC 6 cut(s) 142, 154, 198, 1305, 1367, 1872
BmuI ACTGGG 1 cut(s) 1747
BoxI GACNNNNGTC 1 cut(s) 273
BpiI GAAGAC 3 cut(s) 132, 1095, 1553
BpmI CTGGAG 2 cut(s) 393, 719
Bpu10I CCTNAGC 1 cut(s) 1425
Bpu1102I GCTNAGC 2 cut(s) 281, 1935
Bpu14I TTCGAA 1 cut(s) 791
BpuEI CTTGAG 5 cut(s) 527, 1418, 1475, 1775, 1925
BpuMI CCSGG 1 cut(s) 804
BsaBI GATNNNNATC 2 cut(s) 67, 168
BsaHI GRCGYC 1 cut(s) 1946
BsaI GGTCTC 2 cut(s) 204, 844
BsaJI CCNNGG 5 cut(s) 159, 707, 903, 980, 1594
Bsc4I CCNNNNNNNGG 9 cut(s) 136, 272, 416, 488, 557, 742, 794, 849, 1872
Bse1I ACTGG 6 cut(s) 237, 400, 429, 901, 1381, 1742
Bse3DI GCAATG 2 cut(s) 1419, 1660
Bse8I GATNNNNATC 2 cut(s) 67, 168
BseBI CCWGG 4 cut(s) 181, 709, 871, 1640
BseDI CCNNGG 5 cut(s) 159, 707, 903, 980, 1594
BseGI GGATG 7 cut(s) 68, 169, 799, 1320, 1382, 1648, 1855
BseJI GATNNNNATC 2 cut(s) 67, 168
BseLI CCNNNNNNNGG 9 cut(s) 136, 272, 416, 488, 557, 742, 794, 849, 1872
BseMI GCAATG 2 cut(s) 1419, 1660
BseMII CTCAG 6 cut(s) 295, 650, 678, 1149, 1439, 1926
BseNI ACTGG 6 cut(s) 237, 400, 429, 901, 1381, 1742
BseSI GKGCMC 3 cut(s) 97, 786, 1303
BseXI GCAGC 5 cut(s) 20, 306, 766, 1280, 1746
BseYI CCCAGC 1 cut(s) 44
BshFI GGCC 7 cut(s) 95, 621, 798, 1156, 1593, 1702, 1876
BsiHKAI GWGCWC 2 cut(s) 1359, 1941
BsiHKCI CYCGRG 1 cut(s) 207
BsiSI CCGG 2 cut(s) 186, 804
BsiWI CGTACG 1 cut(s) 1776
BslFI GGGAC 3 cut(s) 513, 1357, 1443
BslI CCNNNNNNNGG 9 cut(s) 136, 272, 416, 488, 557, 742, 794, 849, 1872
BsmAI GTCTC 3 cut(s) 204, 737, 844
BsmFI GGGAC 3 cut(s) 513, 1357, 1443
BsmI GAATGC 2 cut(s) 160, 1671
BsnI GGCC 7 cut(s) 95, 621, 798, 1156, 1593, 1702, 1876
Bso31I GGTCTC 2 cut(s) 204, 844
BsoBI CYCGRG 1 cut(s) 207
Bsp119I TTCGAA 1 cut(s) 791
Bsp120I GGGCCC 1 cut(s) 93
Bsp1286I GDGCHC 6 cut(s) 97, 786, 1303, 1359, 1583, 1941
Bsp143I GATC 5 cut(s) 169, 629, 745, 1786, 1816
Bsp1720I GCTNAGC 2 cut(s) 281, 1935
Bsp19I CCATGG 1 cut(s) 903
BspACI CCGC 5 cut(s) 131, 1590, 1695, 1873, 1964
BspANI GGCC 7 cut(s) 95, 621, 798, 1156, 1593, 1702, 1876
BspCNI CTCAG 6 cut(s) 294, 649, 679, 1150, 1438, 1927
BspLI GGNNCC 5 cut(s) 95, 544, 747, 901, 1111
BspMAI CTGCAG 1 cut(s) 766
BspMI ACCTGC 2 cut(s) 835, 874
BspPI GGATC 4 cut(s) 164, 740, 753, 1781
BspQI GCTCTTC 1 cut(s) 1185
BspT104I TTCGAA 1 cut(s) 791
BspTNI GGTCTC 2 cut(s) 204, 844
BsrDI GCAATG 2 cut(s) 1419, 1660
BsrI ACTGG 6 cut(s) 237, 400, 429, 901, 1381, 1742
BssECI CCNNGG 5 cut(s) 159, 707, 903, 980, 1594
BssMI GATC 5 cut(s) 169, 629, 745, 1786, 1816
BssNAI GTATAC 1 cut(s) 1132
BssNI GRCGYC 1 cut(s) 1946
BssT1I CCWWGG 4 cut(s) 159, 903, 980, 1594
Bst1107I GTATAC 1 cut(s) 1132
Bst2UI CCWGG 4 cut(s) 181, 709, 871, 1640
Bst4CI ACNGT 5 cut(s) 367, 547, 1124, 1350, 1977
Bst6I CTCTTC 1 cut(s) 1185
BstACI GRCGYC 1 cut(s) 1946
BstBI TTCGAA 1 cut(s) 791
BstC8I GCNNGC 3 cut(s) 1064, 1633, 1971
BstDEI CTNAG 6 cut(s) 281, 636, 687, 1158, 1425, 1935
BstDSI CCRYGG 1 cut(s) 903
BstENI CCTNNNNNAGG 1 cut(s) 792
BstF5I GGATG 7 cut(s) 68, 169, 799, 1320, 1382, 1648, 1855
BstHHI GCGC 1 cut(s) 1401
BstKTI GATC 5 cut(s) 172, 632, 748, 1789, 1819
BstMAI GTCTC 3 cut(s) 204, 737, 844
BstMBI GATC 5 cut(s) 169, 629, 745, 1786, 1816
BstMWI GCNNNNNNNGC 4 cut(s) 164, 1587, 1882, 1970
BstNI CCWGG 4 cut(s) 181, 709, 871, 1640
BstNSI RCATGY 1 cut(s) 198
BstPAI GACNNNNGTC 1 cut(s) 273
BstSCI CCNGG 5 cut(s) 179, 707, 802, 869, 1638
BstSFI CTRYAG 1 cut(s) 762
BstSLI GKGCMC 3 cut(s) 97, 786, 1303
BstV1I GCAGC 5 cut(s) 20, 306, 766, 1280, 1746
BstV2I GAAGAC 3 cut(s) 132, 1095, 1553
BstX2I RGATCY 1 cut(s) 745
BstYI RGATCY 1 cut(s) 745
BstZ17I GTATAC 1 cut(s) 1132
BsuRI GGCC 7 cut(s) 95, 621, 798, 1156, 1593, 1702, 1876
BtgI CCRYGG 1 cut(s) 903
BtsCI GGATG 7 cut(s) 68, 169, 799, 1320, 1382, 1648, 1855
BtsI GCAGTG 1 cut(s) 936
BtsIMutI CAGTG 5 cut(s) 393, 436, 936, 1346, 1973
BveI ACCTGC 2 cut(s) 835, 874
Cac8I GCNNGC 3 cut(s) 1064, 1633, 1971
CaiI CAGNNNCTG 1 cut(s) 28
CfoI GCGC 1 cut(s) 1401
Cfr13I GGNCC 6 cut(s) 93, 94, 183, 398, 1006, 1154
CseI GACGC 2 cut(s) 746, 1935
Csp6I GTAC 3 cut(s) 263, 661, 1777
CviAII CATG 9 cut(s) 83, 195, 215, 308, 587, 904, 1402, 1900, 1959
CviQI GTAC 3 cut(s) 263, 661, 1777
DdeI CTNAG 6 cut(s) 281, 636, 687, 1158, 1425, 1935
DpnI GATC 5 cut(s) 171, 631, 747, 1788, 1818
DpnII GATC 5 cut(s) 169, 629, 745, 1786, 1816
EaeI YGGCCR 1 cut(s) 1591
Eam1104I CTCTTC 1 cut(s) 1185
EarI CTCTTC 1 cut(s) 1185
EciI GGCGGA 1 cut(s) 1979
Ecl136II GAGCTC 1 cut(s) 1939
Eco130I CCWWGG 4 cut(s) 159, 903, 980, 1594
Eco147I AGGCCT 2 cut(s) 621, 1702
Eco24I GRGCYC 3 cut(s) 97, 1583, 1941
Eco31I GGTCTC 2 cut(s) 204, 844
Eco32I GATATC 1 cut(s) 1173
Eco47I GGWCC 3 cut(s) 183, 398, 1006
Eco53kI GAGCTC 1 cut(s) 1939
Eco57I CTGAAG 1 cut(s) 434
Eco88I CYCGRG 1 cut(s) 207
EcoICRI GAGCTC 1 cut(s) 1939
EcoNI CCTNNNNNAGG 1 cut(s) 792
EcoO109I RGGNCCY 1 cut(s) 94
EcoRI GAATTC 2 cut(s) 1483, 1618
EcoRII CCWGG 4 cut(s) 179, 707, 869, 1638
EcoRV GATATC 1 cut(s) 1173
EcoT14I CCWWGG 4 cut(s) 159, 903, 980, 1594
EcoT38I GRGCYC 3 cut(s) 97, 1583, 1941
ErhI CCWWGG 4 cut(s) 159, 903, 980, 1594
FaeI CATG 9 cut(s) 86, 198, 218, 311, 590, 907, 1405, 1903, 1962
FalI AAGNNNNNCTT 4 cut(s) 1712, 1744, 1737, 1769
FaqI GGGAC 3 cut(s) 513, 1357, 1443
FatI CATG 9 cut(s) 82, 194, 214, 307, 586, 903, 1401, 1899, 1958
FauI CCCGC 2 cut(s) 138, 1688
FblI GTMKAC 2 cut(s) 1020, 1131
Fnu4HI GCNGC 7 cut(s) 34, 320, 755, 1269, 1591, 1760, 1874
FokI GGATG 7 cut(s) 75, 176, 786, 1327, 1389, 1655, 1842
FriOI GRGCYC 3 cut(s) 97, 1583, 1941
Fsp4HI GCNGC 7 cut(s) 34, 320, 755, 1269, 1591, 1760, 1874
FspBI CTAG 4 cut(s) 923, 1073, 1488, 1955
GlaI GCGC 1 cut(s) 1400
GluI GCNGC 7 cut(s) 34, 320, 755, 1269, 1591, 1760, 1874
GsaI CCCAGC 1 cut(s) 48
GsuI CTGGAG 2 cut(s) 393, 719
HaeIII GGCC 7 cut(s) 95, 621, 798, 1156, 1593, 1702, 1876
HapII CCGG 2 cut(s) 186, 804
HgaI GACGC 2 cut(s) 746, 1935
HhaI GCGC 1 cut(s) 1401
Hin1I GRCGYC 1 cut(s) 1946
Hin1II CATG 9 cut(s) 86, 198, 218, 311, 590, 907, 1405, 1903, 1962
Hin6I GCGC 1 cut(s) 1399
HinP1I GCGC 1 cut(s) 1399
HindIII AAGCTT 1 cut(s) 533
HinfI GANTC 6 cut(s) 68, 570, 1028, 1056, 1431, 1843
HpaII CCGG 2 cut(s) 186, 804
HphI GGTGA 3 cut(s) 1107, 1246, 1852
Hpy166II GTNNAC 3 cut(s) 80, 1021, 1132
Hpy188I TCNGA 6 cut(s) 948, 1033, 1450, 1477, 1567, 1617
Hpy8I GTNNAC 3 cut(s) 80, 1021, 1132
HpyAV CCTTC 3 cut(s) 798, 1622, 1887
HpyCH4III ACNGT 5 cut(s) 367, 547, 1124, 1350, 1977
HpyCH4IV ACGT 2 cut(s) 104, 1779
HpyF10VI GCNNNNNNNGC 4 cut(s) 164, 1587, 1882, 1970
HpyF3I CTNAG 6 cut(s) 281, 636, 687, 1158, 1425, 1935
HpySE526I ACGT 2 cut(s) 104, 1779
Hsp92I GRCGYC 1 cut(s) 1946
Hsp92II CATG 9 cut(s) 86, 198, 218, 311, 590, 907, 1405, 1903, 1962
HspAI GCGC 1 cut(s) 1399
Kzo9I GATC 5 cut(s) 169, 629, 745, 1786, 1816
LguI GCTCTTC 1 cut(s) 1185
LmnI GCTCC 1 cut(s) 1966
Lsp1109I GCAGC 5 cut(s) 20, 306, 766, 1280, 1746
LweI GCATC 6 cut(s) 142, 154, 198, 1305, 1367, 1872
MaeI CTAG 4 cut(s) 923, 1073, 1488, 1955
MaeII ACGT 2 cut(s) 104, 1779
MaeIII GTNAC 3 cut(s) 809, 892, 1234
MalI GATC 5 cut(s) 171, 631, 747, 1788, 1818
MboI GATC 5 cut(s) 169, 629, 745, 1786, 1816
MboII GAAGA 7 cut(s) 137, 440, 695, 997, 1100, 1202, 1558
MfeI CAATTG 1 cut(s) 148
MflI RGATCY 1 cut(s) 745
MhlI GDGCHC 6 cut(s) 97, 786, 1303, 1359, 1583, 1941
MlyI GAGTC 2 cut(s) 564, 1425
MmeI TCCRAC 3 cut(s) 1370, 1523, 1884
MroXI GAANNNNTTC 1 cut(s) 1802
MseI TTAA 9 cut(s) 108, 228, 353, 425, 641, 1185, 1253, 1385, 1647
MslI CAYNNNNRTG 2 cut(s) 1263, 1641
MspI CCGG 2 cut(s) 186, 804
MspR9I CCNGG 5 cut(s) 181, 709, 804, 871, 1640
MunI CAATTG 1 cut(s) 148
Mva1269I GAATGC 2 cut(s) 160, 1671
MvaI CCWGG 4 cut(s) 181, 709, 871, 1640
MwoI GCNNNNNNNGC 4 cut(s) 164, 1587, 1882, 1970
NciI CCSGG 1 cut(s) 804
NcoI CCATGG 1 cut(s) 903
NdeII GATC 5 cut(s) 169, 629, 745, 1786, 1816
NlaIII CATG 9 cut(s) 86, 198, 218, 311, 590, 907, 1405, 1903, 1962
NlaIV GGNNCC 5 cut(s) 95, 544, 747, 901, 1111
NmuCI GTSAC 2 cut(s) 892, 1234
NspI RCATGY 1 cut(s) 198
NspV TTCGAA 1 cut(s) 791
PaeR7I CTCGAG 1 cut(s) 207
PceI AGGCCT 2 cut(s) 621, 1702
PciI ACATGT 1 cut(s) 194
PciSI GCTCTTC 1 cut(s) 1185
PctI GAATGC 2 cut(s) 160, 1671
PdmI GAANNNNTTC 1 cut(s) 1802
PfeI GAWTC 4 cut(s) 68, 1028, 1056, 1843
Pfl23II CGTACG 1 cut(s) 1776
PflMI CCANNNNNTGG 2 cut(s) 416, 557
PfoI TCCNGGA 1 cut(s) 802
PkrI GCNGC 7 cut(s) 35, 321, 756, 1270, 1592, 1761, 1875
PleI GAGTC 2 cut(s) 564, 1425
PpsI GAGTC 2 cut(s) 564, 1425
PscI ACATGT 1 cut(s) 194
PshAI GACNNNNGTC 1 cut(s) 273
PshBI ATTAAT 1 cut(s) 228
PsiI TTATAA 1 cut(s) 221
Psp124BI GAGCTC 1 cut(s) 1941
Psp1406I AACGTT 1 cut(s) 104
Psp6I CCWGG 4 cut(s) 179, 707, 869, 1638
PspFI CCCAGC 1 cut(s) 44
PspGI CCWGG 4 cut(s) 179, 707, 869, 1638
PspLI CGTACG 1 cut(s) 1776
PspN4I GGNNCC 5 cut(s) 95, 544, 747, 901, 1111
PspOMI GGGCCC 1 cut(s) 93
PspPI GGNCC 6 cut(s) 93, 94, 183, 398, 1006, 1154
PsrI GAACNNNNNNTAC 2 cut(s) 1500, 1532
PstI CTGCAG 1 cut(s) 766
PstNI CAGNNNCTG 1 cut(s) 28
PsuI RGATCY 1 cut(s) 745
RsaI GTAC 3 cut(s) 264, 662, 1778
RsaNI GTAC 3 cut(s) 263, 661, 1777
RseI CAYNNNNRTG 2 cut(s) 1263, 1641
SacI GAGCTC 1 cut(s) 1941
SapI GCTCTTC 1 cut(s) 1185
SaqAI TTAA 9 cut(s) 108, 228, 353, 425, 641, 1185, 1253, 1385, 1647
SatI GCNGC 7 cut(s) 34, 320, 755, 1269, 1591, 1760, 1874
Sau3AI GATC 5 cut(s) 169, 629, 745, 1786, 1816
Sau96I GGNCC 6 cut(s) 93, 94, 183, 398, 1006, 1154
SchI GAGTC 2 cut(s) 564, 1425
ScrFI CCNGG 5 cut(s) 181, 709, 804, 871, 1640
SduI GDGCHC 6 cut(s) 97, 786, 1303, 1359, 1583, 1941
SfaNI GCATC 6 cut(s) 142, 154, 198, 1305, 1367, 1872
SfcI CTRYAG 1 cut(s) 762
Sfr274I CTCGAG 1 cut(s) 207
SfuI TTCGAA 1 cut(s) 791
SinI GGWCC 3 cut(s) 183, 398, 1006
SlaI CTCGAG 1 cut(s) 207
SmiMI CAYNNNNRTG 2 cut(s) 1263, 1641
SmlI CTYRAG 6 cut(s) 207, 506, 1433, 1454, 1754, 1940
SmoI CTYRAG 6 cut(s) 207, 506, 1433, 1454, 1754, 1940
SseBI AGGCCT 2 cut(s) 621, 1702
SsiI CCGC 5 cut(s) 131, 1590, 1695, 1873, 1964
SspI AATATT 1 cut(s) 232
SspMI CTAG 4 cut(s) 923, 1073, 1488, 1955
SstI GAGCTC 1 cut(s) 1941
StuI AGGCCT 2 cut(s) 621, 1702
StyD4I CCNGG 5 cut(s) 179, 707, 802, 869, 1638
StyI CCWWGG 4 cut(s) 159, 903, 980, 1594
TaaI ACNGT 5 cut(s) 367, 547, 1124, 1350, 1977
TaiI ACGT 2 cut(s) 107, 1782
TaqI TCGA 5 cut(s) 208, 628, 791, 1880, 1917
TauI GCSGC 2 cut(s) 1593, 1876
TfiI GAWTC 4 cut(s) 68, 1028, 1056, 1843
Tru1I TTAA 9 cut(s) 108, 228, 353, 425, 641, 1185, 1253, 1385, 1647
Tru9I TTAA 9 cut(s) 108, 228, 353, 425, 641, 1185, 1253, 1385, 1647
TscAI CASTG 5 cut(s) 400, 436, 943, 1353, 1980
TseFI GTSAC 2 cut(s) 892, 1234
TseI GCWGC 5 cut(s) 33, 319, 754, 1268, 1759
Tsp45I GTSAC 2 cut(s) 892, 1234
TspDTI ATGAA 5 cut(s) 99, 138, 231, 402, 1418
TspRI CASTG 5 cut(s) 400, 436, 943, 1353, 1980
Van91I CCANNNNNTGG 2 cut(s) 416, 557
VpaK11BI GGWCC 3 cut(s) 183, 398, 1006
VspI ATTAAT 1 cut(s) 228
XagI CCTNNNNNAGG 1 cut(s) 792
XapI RAATTY 3 cut(s) 421, 1483, 1618
XceI RCATGY 1 cut(s) 198
XhoI CTCGAG 1 cut(s) 207
XmiI GTMKAC 2 cut(s) 1020, 1131
XmnI GAANNNNTTC 1 cut(s) 1802
XspI CTAG 4 cut(s) 923, 1073, 1488, 1955
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.