FvH4_5g10840

Serine hydrolase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Forward (+)
6125909 .. 6129330
3422 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g10840.t1

Sequence Viewer

Length: 1383 bp
ATGGATGCAATGGGAAAAACCAGATCGGTTCTTACATTGACAGGAAGATTCATAAACGAGGCTGTTAGCTTCTTCGTCTTCTCCATTCTCGACCTCGTCGATTTCCTCCTGTGTTTTCTCTACAAAGTTGCGGACCTTTTCTTTGAAGCCGAATGGAAGCCTTGCTACTGTTCATCTTCCAAAGAGGTCATTACGAACAGCGGCAAGATCTTGGTCTCAGAGCAGGGCGAGTCGAAAATCGTCTGCCTTAGCTCGACGAAGCTACAGCTCGAGGAGATCTCAGATACACTCTACACTCGCCCTTCGCTCTTGTCCGAGGTCTCCAAGATGACTACGAGGGAGACCAAGAGAGGTTCCGCCGTTCGATCCTCGTTCACGGTCAACTCCACCATCGTCGAAATGCTTCAGGGAAAGATCGGCGGCCAAATATGCCATCCTATCTCGAGGTGGTCGGATTGTGACTGTAAATTCTGCACTTCTTGGACCTCTTCTTGCAAAGAAACCCTCTACGTTCGAGCTGAAGGACCCAAAGATCATGATGCACGAGAGGATGTGCTATTCATTCATGGGTTTATTTCATCATCGGCATTCTGGACGGAGACGGTGTTCCCGAACTTGTCAAGCGCTGCAAAATCAAATTTTAGGTTTTTTGCTATTGATCTTTTGGGGTTTGGAAGGAGTCCAAAGCCAGCCGACTCTATGTACACCCTCAGAGAACACTTAGAAATGATCGAGCAGTCCGTGCTTGAGCCTCATAAAGTTAAATCCTTCCACATTGTTGCTCATTCATTAGGCTGCATTTTGGCCCTTGCCCTTGCCGTTAAGCACCCCAACTCTATCAAATCCCTCACCTTACTCGCCCCGCCATACTTCCCTGTACCAAAAGGGGTACAAGCAACACAACATGTGATGAGGATGGTAGCGCCGAGGCGTGTTTGGCCCGTGATTGGCTTCGGTGCGTCCATTGCGTGCTGGTACGAGCACATCTCACGGACGATCTGCCTTCTCATTTGCAAGAACCACCGTTTTATTGAGTTTGTTGCCAAATTTGTGACTAGAAACAGGATGAGAACGTTTTTGCTTGAAGGGTTCTTCTGCCACACACACAACGCAGCATGGCACACTCTGCACAACATAATATGCGGCACTGCGGGCAAGATGGACGTCTACTTAGACACTGTTCGAGACCAACTAAAATGCGATGTCAATGTGTTCCATGGCAGAGATGATGAGCTTATCCCAGTTGAATGCAGCTACAATGTGCAATCGAGGGTTCCTCGGGCTCGCGTTAAGGTGATTGAGAAGAAAGATCACATCACGATTGTCGTTGGGAGACAGAAGGCTTTCACTAGAGAGCTGGAGGCGATTTGGAACAATTCATAA

Protein Analysis

461

Amino Acids

52.11

Weight (kDa)

8.75

Isoelectric Point (pI)

44.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hydrolase_4 PF12146 181 - 436 2.5e-12 Serine aminopeptidase, S33
Abhydrolase_1 PF00561 185 - 291 2.6e-25 alpha/beta hydrolase fold
Abhydrolase_6 PF12697 185 - 438 1.3e-16 Alpha/beta hydrolase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011322)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1167
AccI GTMKAC 1 cut(s) 1167
AccII CGCG 1 cut(s) 1287
AciI CCGC 7 cut(s) 131, 201, 357, 420, 863, 1143, 1151
AclI AACGTT 1 cut(s) 1073
AclWI GGATC 1 cut(s) 360
AcoI YGGCCR 1 cut(s) 421
AcsI RAATTY 3 cut(s) 467, 637, 1046
AcuI CTGAAG 2 cut(s) 389, 540
AcyI GRCGYC 1 cut(s) 1164
AfaI GTAC 4 cut(s) 704, 879, 891, 977
AfeI AGCGCT 1 cut(s) 625
AfiI CCNNNNNNNGG 1 cut(s) 947
AflIII ACRYGT 1 cut(s) 904
AgsI TTSAA 3 cut(s) 146, 1085, 1247
AloI GAACNNNNNNTCC 2 cut(s) 590, 622
AluBI AGCT 8 cut(s) 69, 252, 262, 268, 518, 1234, 1254, 1357
AluI AGCT 8 cut(s) 69, 252, 262, 268, 518, 1234, 1254, 1357
Alw21I GWGCWC 1 cut(s) 984
Alw26I GTCTC 6 cut(s) 220, 325, 335, 593, 1179, 1327
AlwI GGATC 1 cut(s) 360
Ama87I CYCGRG 3 cut(s) 269, 442, 1278
Aor51HI AGCGCT 1 cut(s) 625
AoxI GGCC 3 cut(s) 421, 804, 938
ApeKI GCWGC 4 cut(s) 626, 795, 1112, 1251
ApoI RAATTY 3 cut(s) 467, 637, 1046
ArsI GACNNNNNNTTYG 2 cut(s) 125, 157
Asp700I GAANNNNTTC 2 cut(s) 402, 1343
AspLEI GCGC 2 cut(s) 626, 925
AspS9I GGNCC 5 cut(s) 133, 483, 524, 805, 939
AsuHPI GGTGA 2 cut(s) 841, 1306
AvaI CYCGRG 3 cut(s) 269, 442, 1278
AvaII GGWCC 3 cut(s) 133, 483, 524
BanII GRGCYC 1 cut(s) 1285
BarI GAAGNNNNNNTAC 2 cut(s) 149, 181
BauI CACGAG 1 cut(s) 543
BbsI GAAGAC 1 cut(s) 70
Bbv12I GWGCWC 1 cut(s) 984
BbvI GCAGC 4 cut(s) 613, 782, 1124, 1263
BccI CCATC 4 cut(s) 398, 441, 910, 1153
BceAI ACGGC 2 cut(s) 344, 803
BcoDI GTCTC 6 cut(s) 220, 325, 335, 593, 1179, 1327
BfaI CTAG 2 cut(s) 1056, 1350
BfmI CTRYAG 1 cut(s) 263
BfoI RGCGCY 2 cut(s) 627, 926
BglII AGATCT 2 cut(s) 207, 276
BisI GCNGC 7 cut(s) 202, 421, 627, 796, 1113, 1144, 1252
BlsI GCNGC 7 cut(s) 203, 422, 628, 797, 1114, 1145, 1253
Bme18I GGWCC 3 cut(s) 133, 483, 524
BmeT110I CYCGRG 3 cut(s) 269, 442, 1278
BmgT120I GGNCC 5 cut(s) 133, 483, 524, 805, 939
BmiI GGNNCC 3 cut(s) 355, 526, 1275
BmrI ACTGGG 1 cut(s) 1235
BmsI GCATC 1 cut(s) 529
BmuI ACTGGG 1 cut(s) 1235
BpiI GAAGAC 1 cut(s) 70
BplI GAGNNNNNCTC 6 cut(s) 263, 295, 971, 1003, 1261, 1293
BpmI CTGGAG 1 cut(s) 1379
Bpu10I CCTNAGC 1 cut(s) 248
BpuEI CTTGAG 1 cut(s) 767
BsaHI GRCGYC 1 cut(s) 1164
BsaI GGTCTC 4 cut(s) 220, 325, 335, 1179
BsaJI CCNNGG 4 cut(s) 315, 926, 1216, 1277
BsaXI ACNNNNNCTCC 2 cut(s) 590, 620
Bsc4I CCNNNNNNNGG 1 cut(s) 947
Bse1I ACTGG 1 cut(s) 1241
Bse3DI GCAATG 2 cut(s) 15, 963
BseDI CCNNGG 4 cut(s) 315, 926, 1216, 1277
BseGI GGATG 5 cut(s) 10, 433, 556, 921, 1071
BseLI CCNNNNNNNGG 1 cut(s) 947
BseMI GCAATG 2 cut(s) 15, 963
BseMII CTCAG 3 cut(s) 231, 294, 724
BseNI ACTGG 1 cut(s) 1241
BseRI GAGGAG 1 cut(s) 287
BseXI GCAGC 4 cut(s) 613, 782, 1124, 1263
BsgI GTGCAG 2 cut(s) 457, 1112
Bsh1236I CGCG 1 cut(s) 1287
BshFI GGCC 3 cut(s) 423, 806, 940
BsiHKAI GWGCWC 1 cut(s) 984
BsiHKCI CYCGRG 3 cut(s) 269, 442, 1278
BslI CCNNNNNNNGG 1 cut(s) 947
BsmAI GTCTC 6 cut(s) 220, 325, 335, 593, 1179, 1327
BsmBI CGTCTC 1 cut(s) 593
BsmI GAATGC 2 cut(s) 587, 1253
BsnI GGCC 3 cut(s) 423, 806, 940
Bso31I GGTCTC 4 cut(s) 220, 325, 335, 1179
BsoBI CYCGRG 3 cut(s) 269, 442, 1278
Bsp1286I GDGCHC 2 cut(s) 984, 1285
Bsp1407I TGTACA 1 cut(s) 702
Bsp19I CCATGG 1 cut(s) 1216
BspACI CCGC 7 cut(s) 131, 201, 357, 420, 863, 1143, 1151
BspANI GGCC 3 cut(s) 423, 806, 940
BspCNI CTCAG 3 cut(s) 230, 293, 723
BspFNI CGCG 1 cut(s) 1287
BspHI TCATGA 1 cut(s) 535
BspLI GGNNCC 3 cut(s) 355, 526, 1275
BspPI GGATC 1 cut(s) 360
BspTNI GGTCTC 4 cut(s) 220, 325, 335, 1179
BsrDI GCAATG 2 cut(s) 15, 963
BsrGI TGTACA 1 cut(s) 702
BsrI ACTGG 1 cut(s) 1241
BssECI CCNNGG 4 cut(s) 315, 926, 1216, 1277
BssNI GRCGYC 1 cut(s) 1164
BssSI CACGAG 1 cut(s) 543
BssT1I CCWWGG 1 cut(s) 1216
Bst2BI CACGAG 1 cut(s) 543
Bst4CI ACNGT 6 cut(s) 170, 379, 464, 604, 1025, 1180
Bst6I CTCTTC 1 cut(s) 493
BstACI GRCGYC 1 cut(s) 1164
BstAPI GCANNNNNTGC 2 cut(s) 742, 1126
BstAUI TGTACA 1 cut(s) 702
BstC8I GCNNGC 4 cut(s) 690, 970, 1153, 1285
BstDEI CTNAG 6 cut(s) 217, 248, 280, 710, 721, 1171
BstDSI CCRYGG 1 cut(s) 1216
BstF5I GGATG 5 cut(s) 10, 433, 556, 921, 1071
BstFNI CGCG 1 cut(s) 1287
BstH2I RGCGCY 2 cut(s) 627, 926
BstHHI GCGC 2 cut(s) 626, 925
BstMAI GTCTC 6 cut(s) 220, 325, 335, 593, 1179, 1327
BstMWI GCNNNNNNNGC 6 cut(s) 429, 742, 937, 965, 1126, 1152
BstNSI RCATGY 1 cut(s) 908
BstSFI CTRYAG 1 cut(s) 263
BstUI CGCG 1 cut(s) 1287
BstV1I GCAGC 4 cut(s) 613, 782, 1124, 1263
BstV2I GAAGAC 1 cut(s) 70
BstX2I RGATCY 2 cut(s) 207, 276
BstYI RGATCY 2 cut(s) 207, 276
BsuRI GGCC 3 cut(s) 423, 806, 940
BtgI CCRYGG 1 cut(s) 1216
BtgZI GCGATG 1 cut(s) 1215
BtsCI GGATG 5 cut(s) 10, 433, 556, 921, 1071
BtsI GCAGTG 1 cut(s) 1146
BtsIMutI CAGTG 2 cut(s) 1146, 1176
Cac8I GCNNGC 4 cut(s) 690, 970, 1153, 1285
CciI TCATGA 1 cut(s) 535
CfoI GCGC 2 cut(s) 626, 925
Cfr13I GGNCC 5 cut(s) 133, 483, 524, 805, 939
CseI GACGC 1 cut(s) 948
Csp6I GTAC 4 cut(s) 703, 878, 890, 976
CviAII CATG 5 cut(s) 536, 566, 905, 1116, 1217
CviQI GTAC 4 cut(s) 703, 878, 890, 976
DdeI CTNAG 6 cut(s) 217, 248, 280, 710, 721, 1171
EaeI YGGCCR 1 cut(s) 421
Eam1104I CTCTTC 1 cut(s) 493
EarI CTCTTC 1 cut(s) 493
EciI GGCGGA 1 cut(s) 346
Eco130I CCWWGG 1 cut(s) 1216
Eco24I GRGCYC 1 cut(s) 1285
Eco31I GGTCTC 4 cut(s) 220, 325, 335, 1179
Eco47I GGWCC 3 cut(s) 133, 483, 524
Eco47III AGCGCT 1 cut(s) 625
Eco57I CTGAAG 2 cut(s) 389, 540
Eco88I CYCGRG 3 cut(s) 269, 442, 1278
EcoO109I RGGNCCY 1 cut(s) 524
EcoT14I CCWWGG 1 cut(s) 1216
EcoT38I GRGCYC 1 cut(s) 1285
ErhI CCWWGG 1 cut(s) 1216
Esp3I CGTCTC 1 cut(s) 593
FaeI CATG 5 cut(s) 539, 569, 908, 1119, 1220
FatI CATG 5 cut(s) 535, 565, 904, 1115, 1216
FauI CCCGC 2 cut(s) 870, 1144
FblI GTMKAC 1 cut(s) 1167
Fnu4HI GCNGC 7 cut(s) 202, 421, 627, 796, 1113, 1144, 1252
FokI GGATG 5 cut(s) 17, 420, 563, 928, 1078
FriOI GRGCYC 1 cut(s) 1285
Fsp4HI GCNGC 7 cut(s) 202, 421, 627, 796, 1113, 1144, 1252
FspBI CTAG 2 cut(s) 1056, 1350
GlaI GCGC 2 cut(s) 625, 924
GluI GCNGC 7 cut(s) 202, 421, 627, 796, 1113, 1144, 1252
GsuI CTGGAG 1 cut(s) 1379
HaeII RGCGCY 2 cut(s) 627, 926
HaeIII GGCC 3 cut(s) 423, 806, 940
HgaI GACGC 1 cut(s) 948
HhaI GCGC 2 cut(s) 626, 925
Hin1I GRCGYC 1 cut(s) 1164
Hin1II CATG 5 cut(s) 539, 569, 908, 1119, 1220
Hin6I GCGC 2 cut(s) 624, 923
HinP1I GCGC 2 cut(s) 624, 923
HincII GTYRAC 1 cut(s) 382
HindII GTYRAC 1 cut(s) 382
HinfI GANTC 4 cut(s) 48, 230, 679, 695
HphI GGTGA 2 cut(s) 841, 1306
Hpy166II GTNNAC 4 cut(s) 375, 382, 705, 1168
Hpy188I TCNGA 5 cut(s) 220, 283, 316, 454, 713
Hpy188III TCNNGA 7 cut(s) 89, 442, 536, 592, 610, 1184, 1318
Hpy8I GTNNAC 4 cut(s) 375, 382, 705, 1168
Hpy99I CGWCG 3 cut(s) 101, 259, 398
HpyAV CCTTC 7 cut(s) 312, 515, 669, 778, 1013, 1079, 1333
HpyCH4III ACNGT 6 cut(s) 170, 379, 464, 604, 1025, 1180
HpyCH4IV ACGT 3 cut(s) 510, 1073, 1164
HpyF10VI GCNNNNNNNGC 6 cut(s) 429, 742, 937, 965, 1126, 1152
HpyF3I CTNAG 6 cut(s) 217, 248, 280, 710, 721, 1171
HpySE526I ACGT 3 cut(s) 510, 1073, 1164
Hsp92I GRCGYC 1 cut(s) 1164
Hsp92II CATG 5 cut(s) 539, 569, 908, 1119, 1220
HspAI GCGC 2 cut(s) 624, 923
Lsp1109I GCAGC 4 cut(s) 613, 782, 1124, 1263
LweI GCATC 1 cut(s) 529
MaeI CTAG 2 cut(s) 1056, 1350
MaeII ACGT 3 cut(s) 510, 1073, 1164
MaeIII GTNAC 2 cut(s) 458, 1051
MboII GAAGA 7 cut(s) 57, 64, 70, 168, 480, 1084, 1315
MflI RGATCY 2 cut(s) 207, 276
MhlI GDGCHC 2 cut(s) 984, 1285
MluCI AATT 4 cut(s) 467, 637, 1046, 1375
MlyI GAGTC 3 cut(s) 239, 688, 689
MmeI TCCRAC 1 cut(s) 432
MroXI GAANNNNTTC 2 cut(s) 402, 1343
MseI TTAA 3 cut(s) 762, 822, 1290
MspA1I CMGCKG 1 cut(s) 201
Mva1269I GAATGC 2 cut(s) 587, 1253
MvnI CGCG 1 cut(s) 1287
MwoI GCNNNNNNNGC 6 cut(s) 429, 742, 937, 965, 1126, 1152
NcoI CCATGG 1 cut(s) 1216
NlaIII CATG 5 cut(s) 539, 569, 908, 1119, 1220
NlaIV GGNNCC 3 cut(s) 355, 526, 1275
NmeAIII GCCGAG 1 cut(s) 951
NmuCI GTSAC 2 cut(s) 458, 1051
NspI RCATGY 1 cut(s) 908
PaeR7I CTCGAG 2 cut(s) 269, 442
PagI TCATGA 1 cut(s) 535
PciI ACATGT 1 cut(s) 904
PcsI WCGNNNNNNNCGW 3 cut(s) 96, 608, 738
PctI GAATGC 2 cut(s) 587, 1253
PdmI GAANNNNTTC 2 cut(s) 402, 1343
PfeI GAWTC 1 cut(s) 48
PflFI GACNNNGTC 1 cut(s) 95
PkrI GCNGC 7 cut(s) 203, 422, 628, 797, 1114, 1145, 1253
PleI GAGTC 3 cut(s) 238, 687, 689
PpsI GAGTC 3 cut(s) 238, 687, 689
PpuMI RGGWCCY 1 cut(s) 524
PscI ACATGT 1 cut(s) 904
Psp1406I AACGTT 1 cut(s) 1073
Psp5II RGGWCCY 1 cut(s) 524
PspN4I GGNNCC 3 cut(s) 355, 526, 1275
PspPI GGNCC 5 cut(s) 133, 483, 524, 805, 939
PspPPI RGGWCCY 1 cut(s) 524
PspXI VCTCGAGB 1 cut(s) 269
PsuI RGATCY 2 cut(s) 207, 276
PsyI GACNNNGTC 1 cut(s) 95
RsaI GTAC 4 cut(s) 704, 879, 891, 977
RsaNI GTAC 4 cut(s) 703, 878, 890, 976
SaqAI TTAA 3 cut(s) 762, 822, 1290
SatI GCNGC 7 cut(s) 202, 421, 627, 796, 1113, 1144, 1252
Sau96I GGNCC 5 cut(s) 133, 483, 524, 805, 939
SchI GAGTC 3 cut(s) 239, 688, 689
SduI GDGCHC 2 cut(s) 984, 1285
SfaNI GCATC 1 cut(s) 529
SfcI CTRYAG 1 cut(s) 263
Sfr274I CTCGAG 2 cut(s) 269, 442
SinI GGWCC 3 cut(s) 133, 483, 524
SlaI CTCGAG 2 cut(s) 269, 442
SmlI CTYRAG 3 cut(s) 269, 442, 746
SmoI CTYRAG 3 cut(s) 269, 442, 746
Sse9I AATT 4 cut(s) 467, 637, 1046, 1375
SsiI CCGC 7 cut(s) 131, 201, 357, 420, 863, 1143, 1151
SspMI CTAG 2 cut(s) 1056, 1350
StyI CCWWGG 1 cut(s) 1216
TaaI ACNGT 6 cut(s) 170, 379, 464, 604, 1025, 1180
TaiI ACGT 3 cut(s) 513, 1076, 1167
TasI AATT 4 cut(s) 467, 637, 1046, 1375
TatI WGTACW 1 cut(s) 702
TauI GCSGC 3 cut(s) 204, 423, 1146
TfiI GAWTC 1 cut(s) 48
Tru1I TTAA 3 cut(s) 762, 822, 1290
Tru9I TTAA 3 cut(s) 762, 822, 1290
TscAI CASTG 2 cut(s) 1153, 1183
TseFI GTSAC 2 cut(s) 458, 1051
TseI GCWGC 4 cut(s) 626, 795, 1112, 1251
Tsp45I GTSAC 2 cut(s) 458, 1051
TspDTI ATGAA 7 cut(s) 40, 162, 550, 554, 567, 777, 1368
TspGWI ACGGA 3 cut(s) 611, 730, 1006
TspRI CASTG 2 cut(s) 1153, 1183
Tth111I GACNNNGTC 1 cut(s) 95
VpaK11BI GGWCC 3 cut(s) 133, 483, 524
XapI RAATTY 3 cut(s) 467, 637, 1046
XceI RCATGY 1 cut(s) 908
XhoI CTCGAG 2 cut(s) 269, 442
XmiI GTMKAC 1 cut(s) 1167
XmnI GAANNNNTTC 2 cut(s) 402, 1343
XspI CTAG 2 cut(s) 1056, 1350
ZraI GACGTC 1 cut(s) 1165
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.