RLG00000004795

Serine hydrolase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
62334396 .. 62337379
2984 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000004795

Sequence Viewer

Length: 1386 bp
ATGGGAAAAACCAGAACGGTTCTAACATTGACAGGAAGATTCATAAACGAGGCTGTGAGCTTCTTTGTCTTCTCCATTCTCGACCTTTTCGATTTCCTCCTGTGCTTTCTCTACAAAGTTGCGGACCTTTTCTTTGAAGCCGAATGGAAGCCTTGCTACTGCTCATCTTCCAAAGAGGCCATTACGAACAGCGGCAAGATCTTGCTGTCAGAGCAAGGCGAGTCGAAAATCGTCTGCCTTAGCTCGACGAAGCTACAGCTCGAGGAGATCTCAGACACACTCTACACGCGCCCTTCGCTCTTATCCGAGGTCTCCAAGATGACTACGAGGGAGAACAAGAGAGGTTCGGCCGTTCGATCCACGTTCACGGTCAACTCCACCATCGTCGAAATGCTTCAGGGAAAGATTGGAGGCCAAATATGTCACCCTATCCCGAGGTGGTCGGATTGTGACTGTAAATTCTGCACTTCTTGGACCTCTTCTTGCAAAGAAATCCTCTATGTTAAAGCTGAAGGACCCAAAGATCATGATGCACGAGAAGATGTGCTATTCATTCATGGGTTTATTTCATCATCGGCATTCTGGACGGAGACGGTGTTCCCAAACCTTTCAAGCGCTGCAAAATCAAATTTTAGGCTTTTTGCTATTGATCTTTTGGGGTTTGGAAGGAGTCCAAAGCCAGCCGACTCCATGTACACCCTCAGAGAACACTTGGAAATGATTGAACAGTCCGTGCTTGAACCTCATAAAGTTAAATCCTTCCACATTGTGGCTCATTCGTTAGGCTGCATTTTGGCCCTTGCCCTTGCCGTTAAACACCCCAACTCCATCAAATCCCTCACTTTACTCGCCCCGCCATACTTCCCTATACCAAAAGGGGCACAAGCAACACAACATACGATGAGGATGGTGGCTCCGAGACGTGTTTGGCCGGTGATTGCATTTGGTGCGTCAATTGCGTGTTGGTACGAGCACATCTCACGGACGGTGTGCCTTCTCATTTGCAAGAACCACCGTTTTGTTGAGTTTGTTGCCAAACTTGTGACTAGAAACAGGATGAGAACTTTTTTGCTTGAAGGGTTCTTCTGCCACACGCACAACGCAGCATGGCACACTCTGCACAACGTTATATGCGGCACCGCGGGCAAGATGGACGCCTACTTAGACACTGTTCGAGACCATCTAAAATGCGACGTTAATGTGTTCCATGGTAGAGATGATGAACTGATCCCAGTTGAATGCAGCTACAATGTGCAATCGAGAGTTCCTCGTGCTCGCGTTAAGGTGATTGAGAAGAAAGATCACATCACGATTGTCGTTGGGAGACAGAGGGCTTTCGCTAGAGAGCTAGAGGCGATTTGGAACAATTCATCTCCAAGTGGTTAA

Protein Analysis

462

Amino Acids

52.07

Weight (kDa)

8.82

Isoelectric Point (pI)

43.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hydrolase_4 PF12146 178 - 434 6.2e-12 Serine aminopeptidase, S33
Abhydrolase_1 PF00561 182 - 302 2.1e-25 alpha/beta hydrolase fold
Abhydrolase_6 PF12697 182 - 447 1.3e-17 Alpha/beta hydrolase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011322)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1136
AccB7I CCANNNNNTGG 1 cut(s) 769
AccII CGCG 3 cut(s) 289, 1142, 1278
AciI CCGC 6 cut(s) 122, 192, 854, 1134, 1140, 1142
AclI AACGTT 1 cut(s) 1125
AclWI GGATC 2 cut(s) 351, 1222
AcoI YGGCCR 2 cut(s) 348, 929
AcsI RAATTY 2 cut(s) 458, 628
AcuI CTGAAG 2 cut(s) 380, 531
AcyI GRCGYC 1 cut(s) 1155
AdeI CACNNNGTG 1 cut(s) 769
AfaI GTAC 2 cut(s) 695, 968
AfeI AGCGCT 1 cut(s) 616
AfiI CCNNNNNNNGG 1 cut(s) 769
AflIII ACRYGT 1 cut(s) 922
AgsI TTSAA 6 cut(s) 137, 612, 725, 740, 1076, 1238
AjiI CACGTC 1 cut(s) 923
AloI GAACNNNNNNTCC 2 cut(s) 581, 613
AluBI AGCT 7 cut(s) 60, 243, 253, 259, 509, 1245, 1348
AluI AGCT 7 cut(s) 60, 243, 253, 259, 509, 1245, 1348
Alw21I GWGCWC 2 cut(s) 975, 1276
Alw26I GTCTC 5 cut(s) 316, 584, 913, 1170, 1318
AlwI GGATC 2 cut(s) 351, 1222
Ama87I CYCGRG 2 cut(s) 260, 433
Aor51HI AGCGCT 1 cut(s) 616
AoxI GGCC 5 cut(s) 177, 348, 412, 795, 929
ApeKI GCWGC 4 cut(s) 617, 786, 1103, 1242
ApoI RAATTY 2 cut(s) 458, 628
ArsI GACNNNNNNTTYG 2 cut(s) 116, 148
Asp700I GAANNNNTTC 1 cut(s) 393
AspLEI GCGC 2 cut(s) 291, 617
AspS9I GGNCC 4 cut(s) 124, 474, 515, 796
AsuHPI GGTGA 3 cut(s) 416, 946, 1297
AvaI CYCGRG 2 cut(s) 260, 433
AvaII GGWCC 3 cut(s) 124, 474, 515
BaeGI GKGCMC 1 cut(s) 883
BanI GGYRCC 1 cut(s) 1136
BarI GAAGNNNNNNTAC 2 cut(s) 140, 172
BauI CACGAG 2 cut(s) 534, 1269
BbsI GAAGAC 1 cut(s) 61
Bbv12I GWGCWC 2 cut(s) 975, 1276
BbvI GCAGC 4 cut(s) 604, 773, 1115, 1254
BccI CCATC 5 cut(s) 389, 836, 901, 1144, 1188
BceAI ACGGC 2 cut(s) 335, 794
BcoDI GTCTC 5 cut(s) 316, 584, 913, 1170, 1318
BfaI CTAG 3 cut(s) 1047, 1341, 1349
BfmI CTRYAG 1 cut(s) 254
BfoI RGCGCY 1 cut(s) 618
BglII AGATCT 2 cut(s) 198, 267
BisI GCNGC 6 cut(s) 193, 618, 787, 1104, 1135, 1243
BlsI GCNGC 6 cut(s) 194, 619, 788, 1105, 1136, 1244
Bme18I GGWCC 3 cut(s) 124, 474, 515
BmeT110I CYCGRG 2 cut(s) 260, 433
BmgBI CACGTC 1 cut(s) 923
BmgT120I GGNCC 4 cut(s) 124, 474, 515, 796
BmiI GGNNCC 3 cut(s) 517, 915, 1138
BmrI ACTGGG 1 cut(s) 1226
BmsI GCATC 1 cut(s) 520
BmuI ACTGGG 1 cut(s) 1226
BpiI GAAGAC 1 cut(s) 61
BplI GAGNNNNNCTC 6 cut(s) 254, 286, 962, 994, 1252, 1284
Bpu10I CCTNAGC 1 cut(s) 239
BsaHI GRCGYC 1 cut(s) 1155
BsaI GGTCTC 2 cut(s) 316, 1170
BsaJI CCNNGG 4 cut(s) 306, 434, 1140, 1207
BsaXI ACNNNNNCTCC 4 cut(s) 581, 611, 809, 839
Bsc4I CCNNNNNNNGG 1 cut(s) 769
Bse118I RCCGGY 1 cut(s) 931
Bse1I ACTGG 1 cut(s) 1232
BseDI CCNNGG 4 cut(s) 306, 434, 1140, 1207
BseGI GGATG 2 cut(s) 912, 1062
BseLI CCNNNNNNNGG 1 cut(s) 769
BseMII CTCAG 2 cut(s) 285, 715
BseNI ACTGG 1 cut(s) 1232
BseRI GAGGAG 1 cut(s) 278
BseSI GKGCMC 1 cut(s) 883
BseX3I CGGCCG 1 cut(s) 348
BseXI GCAGC 4 cut(s) 604, 773, 1115, 1254
BsgI GTGCAG 2 cut(s) 448, 1103
Bsh1236I CGCG 3 cut(s) 289, 1142, 1278
Bsh1285I CGRYCG 1 cut(s) 351
BshFI GGCC 5 cut(s) 179, 350, 414, 797, 931
BshNI GGYRCC 1 cut(s) 1136
BsiEI CGRYCG 1 cut(s) 351
BsiHKAI GWGCWC 2 cut(s) 975, 1276
BsiHKCI CYCGRG 2 cut(s) 260, 433
BsiSI CCGG 1 cut(s) 932
BslI CCNNNNNNNGG 1 cut(s) 769
BsmAI GTCTC 5 cut(s) 316, 584, 913, 1170, 1318
BsmBI CGTCTC 2 cut(s) 584, 913
BsmI GAATGC 2 cut(s) 578, 1244
BsnI GGCC 5 cut(s) 179, 350, 414, 797, 931
Bso31I GGTCTC 2 cut(s) 316, 1170
BsoBI CYCGRG 2 cut(s) 260, 433
Bsp1286I GDGCHC 3 cut(s) 883, 975, 1276
Bsp1407I TGTACA 1 cut(s) 693
Bsp143I GATC 7 cut(s) 198, 267, 356, 523, 649, 1227, 1300
Bsp19I CCATGG 1 cut(s) 1207
BspACI CCGC 6 cut(s) 122, 192, 854, 1134, 1140, 1142
BspANI GGCC 5 cut(s) 179, 350, 414, 797, 931
BspCNI CTCAG 2 cut(s) 284, 714
BspFNI CGCG 3 cut(s) 289, 1142, 1278
BspHI TCATGA 1 cut(s) 526
BspLI GGNNCC 3 cut(s) 517, 915, 1138
BspPI GGATC 2 cut(s) 351, 1222
BspT107I GGYRCC 1 cut(s) 1136
BspTNI GGTCTC 2 cut(s) 316, 1170
BsrFI RCCGGY 1 cut(s) 931
BsrGI TGTACA 1 cut(s) 693
BsrI ACTGG 1 cut(s) 1232
BssAI RCCGGY 1 cut(s) 931
BssECI CCNNGG 4 cut(s) 306, 434, 1140, 1207
BssMI GATC 7 cut(s) 198, 267, 356, 523, 649, 1227, 1300
BssNI GRCGYC 1 cut(s) 1155
BssSI CACGAG 2 cut(s) 534, 1269
BssT1I CCWWGG 1 cut(s) 1207
Bst2BI CACGAG 2 cut(s) 534, 1269
Bst4CI ACNGT 8 cut(s) 19, 370, 455, 595, 729, 988, 1016, 1171
Bst6I CTCTTC 1 cut(s) 484
BstACI GRCGYC 1 cut(s) 1155
BstAPI GCANNNNNTGC 2 cut(s) 947, 1117
BstAUI TGTACA 1 cut(s) 693
BstC8I GCNNGC 3 cut(s) 681, 1144, 1276
BstDEI CTNAG 4 cut(s) 239, 271, 701, 1162
BstDSI CCRYGG 2 cut(s) 1140, 1207
BstF5I GGATG 2 cut(s) 912, 1062
BstFNI CGCG 3 cut(s) 289, 1142, 1278
BstH2I RGCGCY 1 cut(s) 618
BstHHI GCGC 2 cut(s) 291, 617
BstKTI GATC 7 cut(s) 201, 270, 359, 526, 652, 1230, 1303
BstMAI GTCTC 5 cut(s) 316, 584, 913, 1170, 1318
BstMBI GATC 7 cut(s) 198, 267, 356, 523, 649, 1227, 1300
BstMCI CGRYCG 1 cut(s) 351
BstMWI GCNNNNNNNGC 6 cut(s) 211, 295, 947, 956, 1117, 1143
BstSFI CTRYAG 1 cut(s) 254
BstSLI GKGCMC 1 cut(s) 883
BstUI CGCG 3 cut(s) 289, 1142, 1278
BstV1I GCAGC 4 cut(s) 604, 773, 1115, 1254
BstV2I GAAGAC 1 cut(s) 61
BstX2I RGATCY 2 cut(s) 198, 267
BstYI RGATCY 2 cut(s) 198, 267
BstZI CGGCCG 1 cut(s) 348
BsuRI GGCC 5 cut(s) 179, 350, 414, 797, 931
BtgI CCRYGG 2 cut(s) 1140, 1207
BtrI CACGTC 1 cut(s) 923
BtsCI GGATG 2 cut(s) 912, 1062
BtsIMutI CAGTG 1 cut(s) 1167
Cac8I GCNNGC 3 cut(s) 681, 1144, 1276
CciI TCATGA 1 cut(s) 526
CfoI GCGC 2 cut(s) 291, 617
Cfr10I RCCGGY 1 cut(s) 931
Cfr13I GGNCC 4 cut(s) 124, 474, 515, 796
Cfr42I CCGCGG 1 cut(s) 1143
CseI GACGC 2 cut(s) 939, 1163
Csp6I GTAC 2 cut(s) 694, 967
CviAII CATG 5 cut(s) 527, 557, 691, 1107, 1208
CviQI GTAC 2 cut(s) 694, 967
DdeI CTNAG 4 cut(s) 239, 271, 701, 1162
DpnI GATC 7 cut(s) 200, 269, 358, 525, 651, 1229, 1302
DpnII GATC 7 cut(s) 198, 267, 356, 523, 649, 1227, 1300
DraIII CACNNNGTG 1 cut(s) 769
EaeI YGGCCR 2 cut(s) 348, 929
EagI CGGCCG 1 cut(s) 348
Eam1104I CTCTTC 1 cut(s) 484
EarI CTCTTC 1 cut(s) 484
EclXI CGGCCG 1 cut(s) 348
Eco130I CCWWGG 1 cut(s) 1207
Eco31I GGTCTC 2 cut(s) 316, 1170
Eco47I GGWCC 3 cut(s) 124, 474, 515
Eco47III AGCGCT 1 cut(s) 616
Eco52I CGGCCG 1 cut(s) 348
Eco57I CTGAAG 2 cut(s) 380, 531
Eco88I CYCGRG 2 cut(s) 260, 433
EcoO109I RGGNCCY 1 cut(s) 515
EcoT14I CCWWGG 1 cut(s) 1207
ErhI CCWWGG 1 cut(s) 1207
Esp3I CGTCTC 2 cut(s) 584, 913
FaeI CATG 5 cut(s) 530, 560, 694, 1110, 1211
FatI CATG 5 cut(s) 526, 556, 690, 1106, 1207
FauI CCCGC 2 cut(s) 861, 1135
Fnu4HI GCNGC 6 cut(s) 193, 618, 787, 1104, 1135, 1243
FokI GGATG 2 cut(s) 919, 1069
Fsp4HI GCNGC 6 cut(s) 193, 618, 787, 1104, 1135, 1243
FspBI CTAG 3 cut(s) 1047, 1341, 1349
GlaI GCGC 2 cut(s) 290, 616
GluI GCNGC 6 cut(s) 193, 618, 787, 1104, 1135, 1243
HaeII RGCGCY 1 cut(s) 618
HaeIII GGCC 5 cut(s) 179, 350, 414, 797, 931
HapII CCGG 1 cut(s) 932
HgaI GACGC 2 cut(s) 939, 1163
HhaI GCGC 2 cut(s) 291, 617
Hin1I GRCGYC 1 cut(s) 1155
Hin1II CATG 5 cut(s) 530, 560, 694, 1110, 1211
Hin6I GCGC 2 cut(s) 289, 615
HinP1I GCGC 2 cut(s) 289, 615
HincII GTYRAC 1 cut(s) 373
HindII GTYRAC 1 cut(s) 373
HinfI GANTC 4 cut(s) 39, 221, 670, 686
HpaII CCGG 1 cut(s) 932
HphI GGTGA 3 cut(s) 416, 946, 1297
Hpy166II GTNNAC 3 cut(s) 366, 373, 696
Hpy188I TCNGA 6 cut(s) 211, 274, 307, 445, 704, 918
Hpy188III TCNNGA 7 cut(s) 80, 433, 527, 583, 1175, 1260, 1309
Hpy8I GTNNAC 3 cut(s) 366, 373, 696
Hpy99I CGWCG 3 cut(s) 250, 389, 1196
HpyAV CCTTC 6 cut(s) 303, 506, 660, 769, 1004, 1070
HpyCH4III ACNGT 8 cut(s) 19, 370, 455, 595, 729, 988, 1016, 1171
HpyCH4IV ACGT 4 cut(s) 362, 922, 1125, 1194
HpyF10VI GCNNNNNNNGC 6 cut(s) 211, 295, 947, 956, 1117, 1143
HpyF3I CTNAG 4 cut(s) 239, 271, 701, 1162
HpySE526I ACGT 4 cut(s) 362, 922, 1125, 1194
Hsp92I GRCGYC 1 cut(s) 1155
Hsp92II CATG 5 cut(s) 530, 560, 694, 1110, 1211
HspAI GCGC 2 cut(s) 289, 615
KspI CCGCGG 1 cut(s) 1143
Kzo9I GATC 7 cut(s) 198, 267, 356, 523, 649, 1227, 1300
LmnI GCTCC 1 cut(s) 919
LpnPI CCDG 9 cut(s) 18, 25, 113, 383, 568, 693, 945, 1039, 1245
Lsp1109I GCAGC 4 cut(s) 604, 773, 1115, 1254
LweI GCATC 1 cut(s) 520
MaeI CTAG 3 cut(s) 1047, 1341, 1349
MaeII ACGT 4 cut(s) 362, 922, 1125, 1194
MaeIII GTNAC 3 cut(s) 422, 449, 1042
MalI GATC 7 cut(s) 200, 269, 358, 525, 651, 1229, 1302
MboI GATC 7 cut(s) 198, 267, 356, 523, 649, 1227, 1300
MboII GAAGA 7 cut(s) 48, 61, 159, 471, 551, 1075, 1306
MfeI CAATTG 1 cut(s) 954
MflI RGATCY 2 cut(s) 198, 267
MhlI GDGCHC 3 cut(s) 883, 975, 1276
MluCI AATT 4 cut(s) 458, 628, 954, 1366
MlyI GAGTC 3 cut(s) 230, 679, 680
MmeI TCCRAC 1 cut(s) 423
MroXI GAANNNNTTC 1 cut(s) 393
MseI TTAA 6 cut(s) 504, 753, 813, 1197, 1281, 1384
MspA1I CMGCKG 2 cut(s) 192, 1142
MspI CCGG 1 cut(s) 932
MunI CAATTG 1 cut(s) 954
Mva1269I GAATGC 2 cut(s) 578, 1244
MvnI CGCG 3 cut(s) 289, 1142, 1278
MwoI GCNNNNNNNGC 6 cut(s) 211, 295, 947, 956, 1117, 1143
NcoI CCATGG 1 cut(s) 1207
NdeII GATC 7 cut(s) 198, 267, 356, 523, 649, 1227, 1300
NlaIII CATG 5 cut(s) 530, 560, 694, 1110, 1211
NlaIV GGNNCC 3 cut(s) 517, 915, 1138
NmuCI GTSAC 3 cut(s) 422, 449, 1042
PaeR7I CTCGAG 1 cut(s) 260
PagI TCATGA 1 cut(s) 526
PcsI WCGNNNNNNNCGW 1 cut(s) 87
PctI GAATGC 2 cut(s) 578, 1244
PdmI GAANNNNTTC 1 cut(s) 393
PfeI GAWTC 1 cut(s) 39
PflMI CCANNNNNTGG 1 cut(s) 769
PkrI GCNGC 6 cut(s) 194, 619, 788, 1105, 1136, 1244
PleI GAGTC 3 cut(s) 229, 678, 680
PpsI GAGTC 3 cut(s) 229, 678, 680
PpuMI RGGWCCY 1 cut(s) 515
Psp1406I AACGTT 1 cut(s) 1125
Psp5II RGGWCCY 1 cut(s) 515
PspN4I GGNNCC 3 cut(s) 517, 915, 1138
PspPI GGNCC 4 cut(s) 124, 474, 515, 796
PspPPI RGGWCCY 1 cut(s) 515
PspXI VCTCGAGB 1 cut(s) 260
PsuI RGATCY 2 cut(s) 198, 267
RsaI GTAC 2 cut(s) 695, 968
RsaNI GTAC 2 cut(s) 694, 967
SacII CCGCGG 1 cut(s) 1143
SaqAI TTAA 6 cut(s) 504, 753, 813, 1197, 1281, 1384
SatI GCNGC 6 cut(s) 193, 618, 787, 1104, 1135, 1243
Sau3AI GATC 7 cut(s) 198, 267, 356, 523, 649, 1227, 1300
Sau96I GGNCC 4 cut(s) 124, 474, 515, 796
SchI GAGTC 3 cut(s) 230, 679, 680
SduI GDGCHC 3 cut(s) 883, 975, 1276
SfaNI GCATC 1 cut(s) 520
SfcI CTRYAG 1 cut(s) 254
Sfr274I CTCGAG 1 cut(s) 260
Sfr303I CCGCGG 1 cut(s) 1143
SgrBI CCGCGG 1 cut(s) 1143
SinI GGWCC 3 cut(s) 124, 474, 515
SlaI CTCGAG 1 cut(s) 260
SmlI CTYRAG 1 cut(s) 260
SmoI CTYRAG 1 cut(s) 260
Sse9I AATT 4 cut(s) 458, 628, 954, 1366
SsiI CCGC 6 cut(s) 122, 192, 854, 1134, 1140, 1142
SspMI CTAG 3 cut(s) 1047, 1341, 1349
StyI CCWWGG 1 cut(s) 1207
TaaI ACNGT 8 cut(s) 19, 370, 455, 595, 729, 988, 1016, 1171
TaiI ACGT 4 cut(s) 365, 925, 1128, 1197
TaqI TCGA 9 cut(s) 81, 90, 224, 245, 261, 355, 387, 1174, 1259
TasI AATT 4 cut(s) 458, 628, 954, 1366
TatI WGTACW 1 cut(s) 693
TauI GCSGC 2 cut(s) 195, 1137
TfiI GAWTC 1 cut(s) 39
Tru1I TTAA 6 cut(s) 504, 753, 813, 1197, 1281, 1384
Tru9I TTAA 6 cut(s) 504, 753, 813, 1197, 1281, 1384
TscAI CASTG 1 cut(s) 1174
TseFI GTSAC 3 cut(s) 422, 449, 1042
TseI GCWGC 4 cut(s) 617, 786, 1103, 1242
Tsp45I GTSAC 3 cut(s) 422, 449, 1042
TspDTI ATGAA 6 cut(s) 31, 541, 545, 558, 1236, 1359
TspGWI ACGGA 3 cut(s) 602, 721, 997
TspRI CASTG 1 cut(s) 1174
Van91I CCANNNNNTGG 1 cut(s) 769
VpaK11BI GGWCC 3 cut(s) 124, 474, 515
XapI RAATTY 2 cut(s) 458, 628
XhoI CTCGAG 1 cut(s) 260
XmnI GAANNNNTTC 1 cut(s) 393
XspI CTAG 3 cut(s) 1047, 1341, 1349
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.