FvH4_5g11030
ERF Family

Major facilitator superfamily domain-containing protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Forward (+)
6229986 .. 6233706
3721 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g11030.t3

Sequence Viewer

Length: 1395 bp
ATGGAGTTGTTCTACTTTCTTCTGTTCGGTGCTCTCTCGGCCGTGGTGGCAGCTTTGGAGCTGAGCAAGAGGAACAAGGATCGCATTATTACCTCCTCCACTTTCACACTCTTCAAGAACAATTATCTCCTCGTTTATTCTCTCATGATGGCCGGGGATTGGTTGCAGGGTCCATATGTTTACTACCTCTACAGCACTTATGGGTTTACAAAGGGCGATATTGGACAACTCTTTATTGCTGGGTTTGGTTCGTCTATGTTGTTTGGGACAATTGTAGGGTCTCTAGCTGACAAACAGGGTCGGAAGAGGGCATGTGTTACGTACTGCATAACTTACATCCTAAGTTGCTTCACCAAGCATTTTCCTGACTACAAAGTTTTAATGTTGGGACGCGTACTAGGAGGCATTGCAACTTCTCTACTTTTTTCAGCTTTTGAGTCTTGGCTTGTTGCAGAACACAATAAGAGGGGCTTTGAACAACAATGGCTTTCACTCACATTCTCTAAGGCCATTTTTCTTGGTAACGGTCTGATTGCTATTGTATCTGGGTTATTGGGGAATCTTCTGGTAGATACTCTGGCATTCGGTCCAGTTGCTCCATTTGATGCTGCTGCCTGCATTTTGGCAATTGGCATGGCAATCATATTGGCAACATGGGGTGAAAACTATGGAGACTCATCAGATAACAAGAACTTGCTGACCCAGTTCAGGGGTGCTGCTATAGCCATTGCTTGTGATGAGAAAATCGCTTTGCTGGGTGCCATACAGTCCTTATTTGAAGGCTCAATGTATACCTTTGTGTTTCTCTGGACTCCTGCTCTGAGCCCAAATGATGAGGAGATTCCACATGGTTTCATTTTTGCAACATTCATGCTAGCGTCAATGTTGGGGAGCTCTATTGCATCTCGATTGATGGCCAGCTCAGCCCCCAGAGTCGAGAGCTACATGCAGATTGTATTTGCAGTTTCTGCAGCATCCCTTCTGTGCCCCATTGTGACTAGTTTCTTGATTGCACCTTCCAATGTGAGAGGTGGGGGCATCTCGTTCTCAGGGTATTTTCAAATTTTTGGATTCTGCACATTTGAGGCCTGTGTGGGGATATTCTGGCCATCTATCATGAAAATGAGATCACAATACATCCCAGAGGAGGCACGAAGCACCATCATGAACTTCTTTCGCATTCCTCTCAACATTTTTGTGTGTGTAGTGCTGTACAATGTCAATGCATTTCCCATCACCATCATGTTCGGTATGTGCTCGATTTTCCTCGGTACGGCTGCTGTGTTGCAGAGACGGCTCTTTGTGATAACTGAGGGTGGCAGCCATAAGTCAAAATCATCACTAGAATGGATACCAATGGAGATGGACACTGAAGCGGAGCCATTAAATGACTGA

Protein Analysis

465

Amino Acids

51.01

Weight (kDa)

6.14

Isoelectric Point (pI)

38.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_5 PF05631 4 - 358 2.6e-180 Sugar-tranasporters, 12 TM
MFS_1 PF07690 43 - 393 7.6e-16 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013892)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64650 AT1G64650
fragaria_vesca FvH4_5g11030 FvH4_5g11030 FvH4_5g11030
malus_domestica MD06G1117300.v1.1
prunus_persica Prupe.5G128400_v2.0.a1 Prupe.5G128400_v2.0.a1
pyrus_communis pycom06g10920
rosa_chinensis RchiOBHm_Chr7g0186771
rosa_laevigata RLG00000004817
rosa_multiflora Rmu_sc0009734.1_g000002
rosa_roxburghii Rroxscaffold_3G00267840
rosa_rugosa Rorug06G0476500
rosa_samantha Rh7BG080500 Rh7CG083500
rosa_wichuraiana Rw7G007240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 758
AccI GTMKAC 1 cut(s) 791
AccII CGCG 1 cut(s) 393
AciI CCGC 1 cut(s) 1376
AclWI GGATC 1 cut(s) 87
AcoI YGGCCR 4 cut(s) 39, 150, 915, 1106
AcsI RAATTY 1 cut(s) 1062
AcuI CTGAAG 1 cut(s) 1392
AfaI GTAC 4 cut(s) 323, 396, 1214, 1273
AfiI CCNNNNNNNGG 6 cut(s) 159, 708, 709, 1095, 1147, 1273
AflIII ACRYGT 1 cut(s) 391
AgsI TTSAA 4 cut(s) 115, 476, 779, 1061
AhlI ACTAGT 1 cut(s) 998
AluBI AGCT 7 cut(s) 53, 61, 287, 431, 894, 921, 942
AluI AGCT 7 cut(s) 53, 61, 287, 431, 894, 921, 942
Alw21I GWGCWC 3 cut(s) 34, 896, 1259
Alw26I GTCTC 3 cut(s) 285, 666, 1285
AlwI GGATC 1 cut(s) 87
AlwNI CAGNNNCTG 1 cut(s) 968
AoxI GGCC 6 cut(s) 39, 150, 507, 915, 1086, 1106
ApeKI GCWGC 7 cut(s) 50, 608, 611, 716, 971, 1277, 1320
ApoI RAATTY 1 cut(s) 1062
AspS9I GGNCC 2 cut(s) 170, 587
AsuC2I CCSGG 1 cut(s) 154
AsuHPI GGTGA 3 cut(s) 343, 671, 1228
AsuNHI GCTAGC 1 cut(s) 874
AvaII GGWCC 2 cut(s) 170, 587
BaeGI GKGCMC 1 cut(s) 989
BalI TGGCCA 2 cut(s) 917, 1108
BanI GGYRCC 1 cut(s) 758
BanII GRGCYC 2 cut(s) 827, 896
Bbv12I GWGCWC 3 cut(s) 34, 896, 1259
BbvI GCAGC 7 cut(s) 62, 595, 598, 703, 983, 1264, 1332
BccI CCATC 7 cut(s) 142, 907, 1117, 1169, 1241, 1247, 1357
BceAI ACGGC 3 cut(s) 26, 1290, 1310
BciVI GTATCC 1 cut(s) 1344
BcnI CCSGG 1 cut(s) 154
BcoDI GTCTC 3 cut(s) 285, 666, 1285
BcuI ACTAGT 1 cut(s) 998
BfaI CTAG 5 cut(s) 284, 398, 875, 999, 1343
BfmI CTRYAG 3 cut(s) 190, 720, 969
BfuI GTATCC 1 cut(s) 1344
BglI GCCNNNNNGGC 1 cut(s) 47
BisI GCNGC 7 cut(s) 51, 609, 612, 717, 972, 1278, 1321
BlpI GCTNAGC 2 cut(s) 62, 922
BlsI GCNGC 7 cut(s) 52, 610, 613, 718, 973, 1279, 1322
Bme1390I CCNGG 1 cut(s) 154
Bme18I GGWCC 2 cut(s) 170, 587
BmgT120I GGNCC 2 cut(s) 170, 587
BmiI GGNNCC 3 cut(s) 171, 760, 1380
BmrFI CCNGG 1 cut(s) 154
BmrI ACTGGG 1 cut(s) 697
BmsI GCATC 4 cut(s) 595, 911, 983, 1047
BmtI GCTAGC 1 cut(s) 878
BmuI ACTGGG 1 cut(s) 697
Bpu1102I GCTNAGC 2 cut(s) 62, 922
BpuMI CCSGG 1 cut(s) 154
BsaAI YACGTR 1 cut(s) 321
BsaI GGTCTC 1 cut(s) 285
BsaJI CCNNGG 3 cut(s) 42, 153, 1267
Bsc4I CCNNNNNNNGG 6 cut(s) 159, 708, 709, 1095, 1147, 1273
Bse1I ACTGG 2 cut(s) 590, 703
Bse3DI GCAATG 2 cut(s) 405, 726
BseDI CCNNGG 3 cut(s) 42, 153, 1267
BseGI GGATG 3 cut(s) 336, 974, 1137
BseLI CCNNNNNNNGG 6 cut(s) 159, 708, 709, 1095, 1147, 1273
BseMI GCAATG 2 cut(s) 405, 726
BseMII CTCAG 5 cut(s) 53, 812, 936, 1062, 1302
BseNI ACTGG 2 cut(s) 590, 703
BseRI GAGGAG 4 cut(s) 85, 119, 851, 1160
BseSI GKGCMC 1 cut(s) 989
BseX3I CGGCCG 1 cut(s) 39
BseXI GCAGC 7 cut(s) 62, 595, 598, 703, 983, 1264, 1332
BseYI CCCAGC 2 cut(s) 239, 754
BsgI GTGCAG 1 cut(s) 1060
Bsh1236I CGCG 1 cut(s) 393
Bsh1285I CGRYCG 1 cut(s) 42
BshFI GGCC 6 cut(s) 41, 152, 509, 917, 1088, 1108
BshNI GGYRCC 1 cut(s) 758
BsiEI CGRYCG 1 cut(s) 42
BsiHKAI GWGCWC 3 cut(s) 34, 896, 1259
BsiSI CCGG 1 cut(s) 153
BslFI GGGAC 2 cut(s) 280, 402
BslI CCNNNNNNNGG 6 cut(s) 159, 708, 709, 1095, 1147, 1273
BsmAI GTCTC 3 cut(s) 285, 666, 1285
BsmBI CGTCTC 1 cut(s) 1285
BsmFI GGGAC 2 cut(s) 280, 402
BsmI GAATGC 2 cut(s) 581, 1179
BsnI GGCC 6 cut(s) 41, 152, 509, 917, 1088, 1108
Bso31I GGTCTC 1 cut(s) 285
Bsp1286I GDGCHC 5 cut(s) 34, 827, 896, 989, 1259
Bsp1407I TGTACA 1 cut(s) 1212
Bsp143I GATC 2 cut(s) 79, 1127
Bsp1720I GCTNAGC 2 cut(s) 62, 922
BspACI CCGC 1 cut(s) 1376
BspANI GGCC 6 cut(s) 41, 152, 509, 917, 1088, 1108
BspCNI CTCAG 5 cut(s) 54, 813, 935, 1061, 1303
BspFNI CGCG 1 cut(s) 393
BspHI TCATGA 3 cut(s) 144, 1116, 1164
BspLI GGNNCC 3 cut(s) 171, 760, 1380
BspMAI CTGCAG 1 cut(s) 973
BspOI GCTAGC 1 cut(s) 878
BspPI GGATC 1 cut(s) 87
BspT107I GGYRCC 1 cut(s) 758
BspTNI GGTCTC 1 cut(s) 285
BsrDI GCAATG 2 cut(s) 405, 726
BsrGI TGTACA 1 cut(s) 1212
BsrI ACTGG 2 cut(s) 590, 703
BssECI CCNNGG 3 cut(s) 42, 153, 1267
BssMI GATC 2 cut(s) 79, 1127
BssNAI GTATAC 1 cut(s) 792
Bst1107I GTATAC 1 cut(s) 792
Bst4CI ACNGT 2 cut(s) 527, 768
Bst6I CTCTTC 2 cut(s) 116, 299
BstAPI GCANNNNNTGC 1 cut(s) 968
BstAUI TGTACA 1 cut(s) 1212
BstBAI YACGTR 1 cut(s) 321
BstC8I GCNNGC 3 cut(s) 616, 876, 919
BstDEI CTNAG 7 cut(s) 62, 341, 504, 821, 922, 1048, 1311
BstDSI CCRYGG 1 cut(s) 42
BstF5I GGATG 3 cut(s) 336, 974, 1137
BstFNI CGCG 1 cut(s) 393
BstKTI GATC 2 cut(s) 82, 1130
BstMAI GTCTC 3 cut(s) 285, 666, 1285
BstMBI GATC 2 cut(s) 79, 1127
BstMCI CGRYCG 1 cut(s) 42
BstMWI GCNNNNNNNGC 6 cut(s) 38, 47, 722, 923, 968, 1294
BstNSI RCATGY 2 cut(s) 315, 949
BstSCI CCNGG 1 cut(s) 152
BstSFI CTRYAG 3 cut(s) 190, 720, 969
BstSLI GKGCMC 1 cut(s) 989
BstSNI TACGTA 1 cut(s) 321
BstUI CGCG 1 cut(s) 393
BstV1I GCAGC 7 cut(s) 62, 595, 598, 703, 983, 1264, 1332
BstZ17I GTATAC 1 cut(s) 792
BstZI CGGCCG 1 cut(s) 39
BsuI GTATCC 1 cut(s) 1344
BsuRI GGCC 6 cut(s) 41, 152, 509, 917, 1088, 1108
BtgI CCRYGG 1 cut(s) 42
BtsCI GGATG 3 cut(s) 336, 974, 1137
BtsIMutI CAGTG 1 cut(s) 1368
Cac8I GCNNGC 3 cut(s) 616, 876, 919
CaiI CAGNNNCTG 1 cut(s) 968
CciI TCATGA 3 cut(s) 144, 1116, 1164
Cfr13I GGNCC 2 cut(s) 170, 587
CseI GACGC 2 cut(s) 399, 867
Csp6I GTAC 4 cut(s) 322, 395, 1213, 1272
CviQI GTAC 4 cut(s) 322, 395, 1213, 1272
DdeI CTNAG 7 cut(s) 62, 341, 504, 821, 922, 1048, 1311
DpnI GATC 2 cut(s) 81, 1129
DpnII GATC 2 cut(s) 79, 1127
EaeI YGGCCR 4 cut(s) 39, 150, 915, 1106
EagI CGGCCG 1 cut(s) 39
Eam1104I CTCTTC 2 cut(s) 116, 299
EarI CTCTTC 2 cut(s) 116, 299
Ecl136II GAGCTC 1 cut(s) 894
EclXI CGGCCG 1 cut(s) 39
Eco105I TACGTA 1 cut(s) 321
Eco147I AGGCCT 1 cut(s) 1088
Eco24I GRGCYC 2 cut(s) 827, 896
Eco31I GGTCTC 1 cut(s) 285
Eco47I GGWCC 2 cut(s) 170, 587
Eco52I CGGCCG 1 cut(s) 39
Eco53kI GAGCTC 1 cut(s) 894
Eco57I CTGAAG 1 cut(s) 1392
EcoICRI GAGCTC 1 cut(s) 894
EcoT22I ATGCAT 1 cut(s) 1228
EcoT38I GRGCYC 2 cut(s) 827, 896
Esp3I CGTCTC 1 cut(s) 1285
FalI AAGNNNNNCTT 2 cut(s) 455, 487
FaqI GGGAC 2 cut(s) 280, 402
FauNDI CATATG 1 cut(s) 175
FblI GTMKAC 1 cut(s) 791
Fnu4HI GCNGC 7 cut(s) 51, 609, 612, 717, 972, 1278, 1321
FokI GGATG 3 cut(s) 323, 961, 1124
FriOI GRGCYC 2 cut(s) 827, 896
Fsp4HI GCNGC 7 cut(s) 51, 609, 612, 717, 972, 1278, 1321
FspBI CTAG 5 cut(s) 284, 398, 875, 999, 1343
GluI GCNGC 7 cut(s) 51, 609, 612, 717, 972, 1278, 1321
GsaI CCCAGC 2 cut(s) 243, 758
HaeIII GGCC 6 cut(s) 41, 152, 509, 917, 1088, 1108
HapII CCGG 1 cut(s) 153
HgaI GACGC 2 cut(s) 399, 867
HinfI GANTC 7 cut(s) 437, 559, 674, 811, 841, 933, 1071
HpaII CCGG 1 cut(s) 153
HphI GGTGA 3 cut(s) 343, 671, 1228
Hpy166II GTNNAC 3 cut(s) 181, 207, 792
Hpy188I TCNGA 4 cut(s) 303, 531, 682, 822
Hpy188III TCNNGA 9 cut(s) 115, 145, 365, 808, 906, 937, 1006, 1117, 1165
Hpy8I GTNNAC 3 cut(s) 181, 207, 792
HpyAV CCTTC 3 cut(s) 773, 989, 1026
HpyCH4III ACNGT 2 cut(s) 527, 768
HpyCH4IV ACGT 1 cut(s) 320
HpyF10VI GCNNNNNNNGC 6 cut(s) 38, 47, 722, 923, 968, 1294
HpyF3I CTNAG 7 cut(s) 62, 341, 504, 821, 922, 1048, 1311
HpySE526I ACGT 1 cut(s) 320
Kzo9I GATC 2 cut(s) 79, 1127
LmnI GCTCC 4 cut(s) 58, 601, 891, 1378
Lsp1109I GCAGC 7 cut(s) 62, 595, 598, 703, 983, 1264, 1332
LweI GCATC 4 cut(s) 595, 911, 983, 1047
MaeI CTAG 5 cut(s) 284, 398, 875, 999, 1343
MaeII ACGT 1 cut(s) 320
MaeIII GTNAC 3 cut(s) 316, 521, 994
MalI GATC 2 cut(s) 81, 1129
MboI GATC 2 cut(s) 79, 1127
MboII GAAGA 4 cut(s) 11, 103, 316, 554
MfeI CAATTG 2 cut(s) 270, 627
MhlI GDGCHC 5 cut(s) 34, 827, 896, 989, 1259
MlsI TGGCCA 2 cut(s) 917, 1108
MluCI AATT 4 cut(s) 121, 270, 627, 1062
MluI ACGCGT 1 cut(s) 391
MluNI TGGCCA 2 cut(s) 917, 1108
MlyI GAGTC 4 cut(s) 446, 668, 805, 942
MmeI TCCRAC 1 cut(s) 281
Mox20I TGGCCA 2 cut(s) 917, 1108
Mph1103I ATGCAT 1 cut(s) 1228
MscI TGGCCA 2 cut(s) 917, 1108
MseI TTAA 2 cut(s) 380, 1385
MslI CAYNNNNRTG 5 cut(s) 1121, 1163, 1196, 1241, 1345
Msp20I TGGCCA 2 cut(s) 917, 1108
MspI CCGG 1 cut(s) 153
MspR9I CCNGG 1 cut(s) 154
MunI CAATTG 2 cut(s) 270, 627
Mva1269I GAATGC 2 cut(s) 581, 1179
MvnI CGCG 1 cut(s) 393
MwoI GCNNNNNNNGC 6 cut(s) 38, 47, 722, 923, 968, 1294
NciI CCSGG 1 cut(s) 154
NdeI CATATG 1 cut(s) 175
NdeII GATC 2 cut(s) 79, 1127
NheI GCTAGC 1 cut(s) 874
NlaIV GGNNCC 3 cut(s) 171, 760, 1380
NmeAIII GCCGAG 1 cut(s) 17
NmuCI GTSAC 1 cut(s) 994
NsiI ATGCAT 1 cut(s) 1228
NspI RCATGY 2 cut(s) 315, 949
PagI TCATGA 3 cut(s) 144, 1116, 1164
PceI AGGCCT 1 cut(s) 1088
PctI GAATGC 2 cut(s) 581, 1179
PfeI GAWTC 3 cut(s) 559, 841, 1071
PkrI GCNGC 7 cut(s) 52, 610, 613, 718, 973, 1279, 1322
PleI GAGTC 4 cut(s) 445, 668, 805, 941
PpsI GAGTC 4 cut(s) 445, 668, 805, 941
Ppu21I YACGTR 1 cut(s) 321
Psp124BI GAGCTC 1 cut(s) 896
PspFI CCCAGC 2 cut(s) 239, 754
PspN4I GGNNCC 3 cut(s) 171, 760, 1380
PspPI GGNCC 2 cut(s) 170, 587
PstI CTGCAG 1 cut(s) 973
PstNI CAGNNNCTG 1 cut(s) 968
RsaI GTAC 4 cut(s) 323, 396, 1214, 1273
RsaNI GTAC 4 cut(s) 322, 395, 1213, 1272
RseI CAYNNNNRTG 5 cut(s) 1121, 1163, 1196, 1241, 1345
SacI GAGCTC 1 cut(s) 896
SaqAI TTAA 2 cut(s) 380, 1385
SatI GCNGC 7 cut(s) 51, 609, 612, 717, 972, 1278, 1321
Sau3AI GATC 2 cut(s) 79, 1127
Sau96I GGNCC 2 cut(s) 170, 587
SchI GAGTC 4 cut(s) 446, 668, 805, 942
ScrFI CCNGG 1 cut(s) 154
SduI GDGCHC 5 cut(s) 34, 827, 896, 989, 1259
SfaNI GCATC 4 cut(s) 595, 911, 983, 1047
SfcI CTRYAG 3 cut(s) 190, 720, 969
SinI GGWCC 2 cut(s) 170, 587
SmiMI CAYNNNNRTG 5 cut(s) 1121, 1163, 1196, 1241, 1345
SnaBI TACGTA 1 cut(s) 321
SpeI ACTAGT 1 cut(s) 998
Sse9I AATT 4 cut(s) 121, 270, 627, 1062
SseBI AGGCCT 1 cut(s) 1088
SsiI CCGC 1 cut(s) 1376
SspMI CTAG 5 cut(s) 284, 398, 875, 999, 1343
SstI GAGCTC 1 cut(s) 896
StuI AGGCCT 1 cut(s) 1088
StyD4I CCNGG 1 cut(s) 152
TaaI ACNGT 2 cut(s) 527, 768
TaiI ACGT 1 cut(s) 323
TaqI TCGA 3 cut(s) 907, 936, 1259
TaqII GACCGA 1 cut(s) 575
TasI AATT 4 cut(s) 121, 270, 627, 1062
TatI WGTACW 1 cut(s) 1212
TfiI GAWTC 3 cut(s) 559, 841, 1071
Tru1I TTAA 2 cut(s) 380, 1385
Tru9I TTAA 2 cut(s) 380, 1385
TscAI CASTG 1 cut(s) 1375
TseFI GTSAC 1 cut(s) 994
TseI GCWGC 7 cut(s) 50, 608, 611, 716, 971, 1277, 1320
Tsp45I GTSAC 1 cut(s) 994
TspDTI ATGAA 4 cut(s) 844, 859, 1133, 1181
TspRI CASTG 1 cut(s) 1375
VpaK11BI GGWCC 2 cut(s) 170, 587
XapI RAATTY 1 cut(s) 1062
XceI RCATGY 2 cut(s) 315, 949
XmiI GTMKAC 1 cut(s) 791
XspI CTAG 5 cut(s) 284, 398, 875, 999, 1343
Zsp2I ATGCAT 1 cut(s) 1228
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.