FvH4_5g14061

UDP-glucoronosyl and UDP-glucosyl transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0013674
Physical Location & Seq
Forward (+)
7968530 .. 7969947
1418 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g14061.t1

Sequence Viewer

Length: 1155 bp
ATGGTCACATTTGTCATAACAGAGTTTGCACATGCACGTCTGATGGCTGCGGAGCCAGACTTGGATAATGAGAGGAATAAGGTCAGGTACATCGCAGTGCCTGATGGATTGTCAGAAGATGATGCACGGAATGATGAAGCTGATCCAATGTTTGGGTGGGCTTTGGAGATTGCCGAAATGCTGAAGCTGAAGTTGGCGATCTTCTGGACTTCTGCTCCAGGAGTTTTGGCCTTGATACTTAACATTCCAAAGCTTATTGAGGATGGGATTATTGACGCCAAGGGATCTTCAAAAATTGATGGGAAGGTTCAACTGTCCACAGACCTGCCACCACTGACTAGTGCAGACTTTCTGTGGAATTATTCAGGAAAGCAGTCTGGGGAGACCAACTTCCAATATTTCTCTGGCATTCAACGAAACATGAAGCGTTGTGGCTGGCTTCTGTGCAACTGGTTTCATGAGCTTAACCCCCATGTTGCTAATTTAGTCCCAAACATGTTTCCACTTGGCCCATTACTGGCAAATGGAAAACCTGCTGCATACCTTTGGCCAGAGGACTTGACTTGCTTAAGCTGGCTCCACAAACAACCTGCTAGATCAGTCATTTATGTTGCATTTGGGAGCATCTCAGTATTCAGCCAGCACCAGATGGATGAACTTGCATTAGGCCTTGAACTTGTTGGTCGACCATTCTTATGGGTTAAACGTTCAGACGTCATCAAATGCGGTTCTTCCAAATACCCGGATGGGTATGAAGAGAGAGTGGCGAACCAAGGCAAGATTGTTCAGTGGGCACCCCAAGAACAGGTGTTGGCTCACCCATCAGTTGCTTGTTTTCTGACTCATTGTGGTTGGAACTCGATTATGGATGGCTTAAGCATGGGCGTCCCCTTCCTCTGTTGGCCATACTTTGCCGATCAGTTTTACAACCGGAGTTGCATCTGTAATGGCTATAAAGTTGGTCTGGCCTTGAGCCCAGATGAGTATGGAATTGTTACTAGGCATGAAATCAGAAGGAAACTGGACAGTTTGGTTGCCGATGATGGTATACGAGCCAATGCATTAAAGCTGAAGGAAATGGCTCTTCAGAGTATTAGTGAAGGAGGATCTTCTGCAAAGAATCTGGACAACTTCATTTCACAGATGAAGCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

385

Amino Acids

42.92

Weight (kDa)

5.67

Isoelectric Point (pI)

40.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 184 - 359 1.8e-23 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013674)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g14061 FvH4_5g14161 FvH4_5g14161
malus_domestica MD06G1200500.v1.1
prunus_persica Prupe.5G203300_v2.0.a1
pyrus_communis pycom06g17710
rosa_chinensis RchiOBHm_Chr7g0182751
rosa_laevigata RLG00000005103
rosa_multiflora Rmu_sc0000014.1_g000032 Rmu_sc0024464.1_g000002
rosa_roxburghii Rroxscaffold_3G00271000 Rroxscaffold_5G00344510
rosa_rugosa Rorug06G0449900
rosa_samantha Rh7AG053700 Rh7BG053200 Rh7CG054800 Rh7DG053000
rosa_wichuraiana Rw7G004370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 717
Acc36I ACCTGC 3 cut(s) 333, 541, 598
AccB1I GGYRCC 1 cut(s) 793
AccB7I CCANNNNNTGG 1 cut(s) 152
AccI GTMKAC 2 cut(s) 685, 1048
AciI CCGC 2 cut(s) 50, 726
AclI AACGTT 1 cut(s) 706
AclWI GGATC 3 cut(s) 137, 292, 1114
AcoI YGGCCR 2 cut(s) 548, 902
AcuI CTGAAG 4 cut(s) 203, 209, 1070, 1091
AcyI GRCGYC 3 cut(s) 276, 714, 885
AfaI GTAC 1 cut(s) 89
AfiI CCNNNNNNNGG 3 cut(s) 152, 517, 805
AflII CTTAAG 2 cut(s) 568, 874
AflIII ACRYGT 1 cut(s) 495
AgsI TTSAA 4 cut(s) 291, 311, 413, 674
AhlI ACTAGT 1 cut(s) 338
AjiI CACGTC 1 cut(s) 38
AjnI CCWGG 1 cut(s) 217
AjuI GAANNNNNNNTTGG 2 cut(s) 176, 208
AluBI AGCT 6 cut(s) 140, 187, 253, 463, 573, 1069
AluI AGCT 6 cut(s) 140, 187, 253, 463, 573, 1069
Alw26I GTCTC 1 cut(s) 377
AlwI GGATC 3 cut(s) 137, 292, 1114
AlwNI CAGNNNCTG 1 cut(s) 101
AoxI GGCC 6 cut(s) 228, 508, 548, 667, 902, 966
ApeKI GCWGC 2 cut(s) 47, 536
AspS9I GGNCC 1 cut(s) 509
AsuC2I CCSGG 1 cut(s) 743
AsuHPI GGTGA 1 cut(s) 809
BaeGI GKGCMC 1 cut(s) 796
BalI TGGCCA 2 cut(s) 550, 904
BanI GGYRCC 1 cut(s) 793
BanII GRGCYC 1 cut(s) 977
BbvI GCAGC 2 cut(s) 34, 523
BccI CCATC 9 cut(s) 37, 98, 257, 293, 643, 740, 829, 863, 1037
BciT130I CCWGG 1 cut(s) 219
BcnI CCSGG 1 cut(s) 743
BcoDI GTCTC 1 cut(s) 377
BcuI ACTAGT 1 cut(s) 338
BfaI CTAG 3 cut(s) 339, 594, 999
BfrI CTTAAG 2 cut(s) 568, 874
BfuAI ACCTGC 3 cut(s) 333, 541, 598
BisI GCNGC 2 cut(s) 48, 537
BlsI GCNGC 2 cut(s) 49, 538
Bme1390I CCNGG 2 cut(s) 219, 743
BmgBI CACGTC 1 cut(s) 38
BmgT120I GGNCC 1 cut(s) 509
BmiI GGNNCC 3 cut(s) 54, 578, 795
BmrFI CCNGG 2 cut(s) 219, 743
BmsI GCATC 3 cut(s) 112, 633, 948
BpmI CTGGAG 1 cut(s) 201
BpuEI CTTGAG 1 cut(s) 991
BpuMI CCSGG 1 cut(s) 743
BsaHI GRCGYC 3 cut(s) 276, 714, 885
BsaI GGTCTC 1 cut(s) 377
BsaJI CCNNGG 2 cut(s) 279, 772
BsaWI WCCGGW 1 cut(s) 930
BsaXI ACNNNNNCTCC 2 cut(s) 199, 229
Bsc4I CCNNNNNNNGG 3 cut(s) 152, 517, 805
Bse1I ACTGG 3 cut(s) 455, 522, 1026
BseBI CCWGG 1 cut(s) 219
BseDI CCNNGG 2 cut(s) 279, 772
BseGI GGATG 4 cut(s) 268, 658, 751, 874
BseLI CCNNNNNNNGG 3 cut(s) 152, 517, 805
BseMII CTCAG 1 cut(s) 642
BseNI ACTGG 3 cut(s) 455, 522, 1026
BseSI GKGCMC 1 cut(s) 796
BseXI GCAGC 2 cut(s) 34, 523
BsgI GTGCAG 1 cut(s) 363
BshFI GGCC 6 cut(s) 230, 510, 550, 669, 904, 968
BshNI GGYRCC 1 cut(s) 793
BsiSI CCGG 2 cut(s) 743, 931
BslFI GGGAC 2 cut(s) 473, 872
BslI CCNNNNNNNGG 3 cut(s) 152, 517, 805
BsmAI GTCTC 1 cut(s) 377
BsmFI GGGAC 2 cut(s) 473, 872
BsmI GAATGC 1 cut(s) 408
BsnI GGCC 6 cut(s) 230, 510, 550, 669, 904, 968
Bso31I GGTCTC 1 cut(s) 377
Bsp1286I GDGCHC 2 cut(s) 796, 977
Bsp143I GATC 6 cut(s) 142, 198, 284, 596, 916, 1106
BspACI CCGC 2 cut(s) 50, 726
BspANI GGCC 6 cut(s) 230, 510, 550, 669, 904, 968
BspCNI CTCAG 1 cut(s) 641
BspHI TCATGA 1 cut(s) 457
BspLI GGNNCC 3 cut(s) 54, 578, 795
BspMI ACCTGC 3 cut(s) 333, 541, 598
BspPI GGATC 3 cut(s) 137, 292, 1114
BspQI GCTCTTC 1 cut(s) 1089
BspT107I GGYRCC 1 cut(s) 793
BspTI CTTAAG 2 cut(s) 568, 874
BspTNI GGTCTC 1 cut(s) 377
BsrI ACTGG 3 cut(s) 455, 522, 1026
BssECI CCNNGG 2 cut(s) 279, 772
BssMI GATC 6 cut(s) 142, 198, 284, 596, 916, 1106
BssNAI GTATAC 1 cut(s) 1049
BssNI GRCGYC 3 cut(s) 276, 714, 885
BssT1I CCWWGG 2 cut(s) 279, 772
Bst1107I GTATAC 1 cut(s) 1049
Bst2UI CCWGG 1 cut(s) 219
Bst4CI ACNGT 2 cut(s) 315, 1028
Bst6I CTCTTC 2 cut(s) 750, 1089
BstACI GRCGYC 3 cut(s) 276, 714, 885
BstAFI CTTAAG 2 cut(s) 568, 874
BstC8I GCNNGC 3 cut(s) 437, 575, 641
BstDEI CTNAG 1 cut(s) 628
BstF5I GGATG 4 cut(s) 268, 658, 751, 874
BstKTI GATC 6 cut(s) 145, 201, 287, 599, 919, 1109
BstMAI GTCTC 1 cut(s) 377
BstMBI GATC 6 cut(s) 142, 198, 284, 596, 916, 1106
BstNI CCWGG 1 cut(s) 219
BstNSI RCATGY 2 cut(s) 35, 499
BstSCI CCNGG 2 cut(s) 217, 741
BstSLI GKGCMC 1 cut(s) 796
BstV1I GCAGC 2 cut(s) 34, 523
BstX2I RGATCY 2 cut(s) 284, 1106
BstXI CCANNNNNNTGG 1 cut(s) 696
BstYI RGATCY 2 cut(s) 284, 1106
BstZ17I GTATAC 1 cut(s) 1049
BsuRI GGCC 6 cut(s) 230, 510, 550, 669, 904, 968
BtgZI GCGATG 1 cut(s) 76
BtrI CACGTC 1 cut(s) 38
BtsCI GGATG 4 cut(s) 268, 658, 751, 874
BtsI GCAGTG 1 cut(s) 102
BtsIMutI CAGTG 3 cut(s) 102, 332, 794
BveI ACCTGC 3 cut(s) 333, 541, 598
Cac8I GCNNGC 3 cut(s) 437, 575, 641
CaiI CAGNNNCTG 1 cut(s) 101
CciI TCATGA 1 cut(s) 457
Cfr13I GGNCC 1 cut(s) 509
CseI GACGC 2 cut(s) 284, 874
Csp6I GTAC 1 cut(s) 88
CviAII CATG 7 cut(s) 32, 421, 458, 473, 496, 880, 1004
CviQI GTAC 1 cut(s) 88
DdeI CTNAG 1 cut(s) 628
DpnI GATC 6 cut(s) 144, 200, 286, 598, 918, 1108
DpnII GATC 6 cut(s) 142, 198, 284, 596, 916, 1106
EaeI YGGCCR 2 cut(s) 548, 902
Eam1104I CTCTTC 2 cut(s) 750, 1089
EarI CTCTTC 2 cut(s) 750, 1089
Eco130I CCWWGG 2 cut(s) 279, 772
Eco147I AGGCCT 1 cut(s) 669
Eco24I GRGCYC 1 cut(s) 977
Eco31I GGTCTC 1 cut(s) 377
Eco57I CTGAAG 4 cut(s) 203, 209, 1070, 1091
EcoRII CCWGG 1 cut(s) 217
EcoT14I CCWWGG 2 cut(s) 279, 772
EcoT22I ATGCAT 1 cut(s) 1063
EcoT38I GRGCYC 1 cut(s) 977
ErhI CCWWGG 2 cut(s) 279, 772
FaeI CATG 7 cut(s) 35, 424, 461, 476, 499, 883, 1007
FaqI GGGAC 2 cut(s) 473, 872
FatI CATG 7 cut(s) 31, 420, 457, 472, 495, 879, 1003
FblI GTMKAC 2 cut(s) 685, 1048
Fnu4HI GCNGC 2 cut(s) 48, 537
FokI GGATG 4 cut(s) 275, 665, 758, 881
FriOI GRGCYC 1 cut(s) 977
Fsp4HI GCNGC 2 cut(s) 48, 537
FspBI CTAG 3 cut(s) 339, 594, 999
GluI GCNGC 2 cut(s) 48, 537
GsuI CTGGAG 1 cut(s) 201
HaeIII GGCC 6 cut(s) 230, 510, 550, 669, 904, 968
HapII CCGG 2 cut(s) 743, 931
HgaI GACGC 2 cut(s) 284, 874
Hin1I GRCGYC 3 cut(s) 276, 714, 885
Hin1II CATG 7 cut(s) 35, 424, 461, 476, 499, 883, 1007
HincII GTYRAC 1 cut(s) 686
HindII GTYRAC 1 cut(s) 686
HindIII AAGCTT 1 cut(s) 251
HinfI GANTC 2 cut(s) 841, 1120
HpaII CCGG 2 cut(s) 743, 931
HphI GGTGA 1 cut(s) 809
Hpy166II GTNNAC 3 cut(s) 318, 686, 1049
Hpy188I TCNGA 6 cut(s) 42, 115, 712, 840, 1013, 1089
Hpy188III TCNNGA 4 cut(s) 205, 366, 458, 1124
Hpy8I GTNNAC 3 cut(s) 318, 686, 1049
HpyAV CCTTC 5 cut(s) 298, 901, 1008, 1066, 1094
HpyCH4III ACNGT 2 cut(s) 315, 1028
HpyCH4IV ACGT 3 cut(s) 37, 706, 714
HpyF3I CTNAG 1 cut(s) 628
HpySE526I ACGT 3 cut(s) 37, 706, 714
Hsp92I GRCGYC 3 cut(s) 276, 714, 885
Hsp92II CATG 7 cut(s) 35, 424, 461, 476, 499, 883, 1007
Kzo9I GATC 6 cut(s) 142, 198, 284, 596, 916, 1106
LguI GCTCTTC 1 cut(s) 1089
LmnI GCTCC 4 cut(s) 52, 220, 582, 621
Lsp1109I GCAGC 2 cut(s) 34, 523
LweI GCATC 3 cut(s) 112, 633, 948
MaeI CTAG 3 cut(s) 339, 594, 999
MaeII ACGT 3 cut(s) 37, 706, 714
MaeIII GTNAC 2 cut(s) 4, 994
MalI GATC 6 cut(s) 144, 200, 286, 598, 918, 1108
MboI GATC 6 cut(s) 142, 198, 284, 596, 916, 1106
MboII GAAGA 7 cut(s) 128, 193, 279, 723, 767, 1076, 1101
MflI RGATCY 2 cut(s) 284, 1106
MhlI GDGCHC 2 cut(s) 796, 977
MlsI TGGCCA 2 cut(s) 550, 904
MluCI AATT 4 cut(s) 294, 358, 481, 990
MluNI TGGCCA 2 cut(s) 550, 904
MlyI GAGTC 1 cut(s) 835
MmeI TCCRAC 1 cut(s) 833
MnlI CCTC 5 cut(s) 66, 253, 547, 905, 1097
Mox20I TGGCCA 2 cut(s) 550, 904
Mph1103I ATGCAT 1 cut(s) 1063
MscI TGGCCA 2 cut(s) 550, 904
MseI TTAA 6 cut(s) 240, 465, 569, 702, 875, 1064
MslI CAYNNNNRTG 2 cut(s) 95, 694
Msp20I TGGCCA 2 cut(s) 550, 904
MspCI CTTAAG 2 cut(s) 568, 874
MspI CCGG 2 cut(s) 743, 931
MspR9I CCNGG 2 cut(s) 219, 743
Mva1269I GAATGC 1 cut(s) 408
MvaI CCWGG 1 cut(s) 219
NciI CCSGG 1 cut(s) 743
NdeII GATC 6 cut(s) 142, 198, 284, 596, 916, 1106
NlaIII CATG 7 cut(s) 35, 424, 461, 476, 499, 883, 1007
NlaIV GGNNCC 3 cut(s) 54, 578, 795
NmuCI GTSAC 1 cut(s) 4
NsiI ATGCAT 1 cut(s) 1063
NspI RCATGY 2 cut(s) 35, 499
PagI TCATGA 1 cut(s) 457
PceI AGGCCT 1 cut(s) 669
PciI ACATGT 1 cut(s) 495
PciSI GCTCTTC 1 cut(s) 1089
PctI GAATGC 1 cut(s) 408
PfeI GAWTC 1 cut(s) 1120
PflMI CCANNNNNTGG 1 cut(s) 152
PfoI TCCNGGA 1 cut(s) 217
PkrI GCNGC 2 cut(s) 49, 538
PleI GAGTC 1 cut(s) 835
PpsI GAGTC 1 cut(s) 835
PscI ACATGT 1 cut(s) 495
Psp1406I AACGTT 1 cut(s) 706
Psp6I CCWGG 1 cut(s) 217
PspGI CCWGG 1 cut(s) 217
PspN4I GGNNCC 3 cut(s) 54, 578, 795
PspPI GGNCC 1 cut(s) 509
PstNI CAGNNNCTG 1 cut(s) 101
PsuI RGATCY 2 cut(s) 284, 1106
RsaI GTAC 1 cut(s) 89
RsaNI GTAC 1 cut(s) 88
RseI CAYNNNNRTG 2 cut(s) 95, 694
SalI GTCGAC 1 cut(s) 684
SapI GCTCTTC 1 cut(s) 1089
SaqAI TTAA 6 cut(s) 240, 465, 569, 702, 875, 1064
SatI GCNGC 2 cut(s) 48, 537
Sau3AI GATC 6 cut(s) 142, 198, 284, 596, 916, 1106
Sau96I GGNCC 1 cut(s) 509
SchI GAGTC 1 cut(s) 835
ScrFI CCNGG 2 cut(s) 219, 743
SduI GDGCHC 2 cut(s) 796, 977
SfaNI GCATC 3 cut(s) 112, 633, 948
SmiMI CAYNNNNRTG 2 cut(s) 95, 694
SmlI CTYRAG 3 cut(s) 568, 874, 970
SmoI CTYRAG 3 cut(s) 568, 874, 970
SpeI ACTAGT 1 cut(s) 338
Sse9I AATT 4 cut(s) 294, 358, 481, 990
SseBI AGGCCT 1 cut(s) 669
SsiI CCGC 2 cut(s) 50, 726
SspI AATATT 1 cut(s) 398
SspMI CTAG 3 cut(s) 339, 594, 999
StuI AGGCCT 1 cut(s) 669
StyD4I CCNGG 2 cut(s) 217, 741
StyI CCWWGG 2 cut(s) 279, 772
TaaI ACNGT 2 cut(s) 315, 1028
TaiI ACGT 3 cut(s) 40, 709, 717
TaqI TCGA 2 cut(s) 685, 860
TasI AATT 4 cut(s) 294, 358, 481, 990
TfiI GAWTC 1 cut(s) 1120
Tru1I TTAA 6 cut(s) 240, 465, 569, 702, 875, 1064
Tru9I TTAA 6 cut(s) 240, 465, 569, 702, 875, 1064
TscAI CASTG 3 cut(s) 102, 339, 794
TseFI GTSAC 1 cut(s) 4
TseI GCWGC 2 cut(s) 47, 536
Tsp45I GTSAC 1 cut(s) 4
TspDTI ATGAA 7 cut(s) 150, 437, 446, 669, 768, 1020, 1123
TspGWI ACGGA 1 cut(s) 142
TspRI CASTG 3 cut(s) 102, 339, 794
Van91I CCANNNNNTGG 1 cut(s) 152
Vha464I CTTAAG 2 cut(s) 568, 874
XceI RCATGY 2 cut(s) 35, 499
XcmI CCANNNNNNNNNTGG 2 cut(s) 153, 401
XmiI GTMKAC 2 cut(s) 685, 1048
XspI CTAG 3 cut(s) 339, 594, 999
ZraI GACGTC 1 cut(s) 715
Zsp2I ATGCAT 1 cut(s) 1063
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.