Rh7BG053200

UDP-glucoronosyl and UDP-glucosyl transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0013674
Physical Location & Seq
Reverse (-)
3455339 .. 3456902
1564 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG053200.1

Sequence Viewer

Length: 918 bp
ATGGAAGAAGGACAGCTATCCCGCTCTAATCTGGAAAGTTCAGATCAAGAAAATGCTATCCATATGTTGCTTGTTCCATACCCTTTACAAGGACATATTACACCATTCATAAAGTTGGCATACCTAATTTCTGGTCGTGGAATCATGGTCACACTTGTCATCACAGAGTTTGCACATGCACGTATGATGGCTGCAGAGCCAGAATTGGATAATGAGCGGTATAAGGTCAGGTACATCACAGTTCCTGATGGATTGTCAGAAGATGATGCACGGAATGATGAAGGTAAGCTGGCTCAGAGTATATCCAAAGTCATGCCTGGTCATTTGAGAGAAGTGTTAGAGAAGGTCAACATGGAGGGTAATCGGGTGACTTGTGTCATAGCTGATCCAATGTTTGGGTGGGCTTTGGAGATTGCTGAGACGATGAAGGTCAAGTTGGCAATGTTCTGGCCTTCTGCCCCAGGAATTCTGGCCTTGATACTTAACATTCCAAAGCTTATTGAGGATGGGATTATTGACACAAAGGGATCTTCGAAAATTGATGGGAAGGTTCAACTGTCACCAGACCTGCCACCTCTGACTAGTACCGACTTCCTGTGGAATTTTTCAGGAAACCAGTCTGCCGAGGCCATGTTCCAATATTTCTTAGGCATTCAACAAAACATGAAGCGTTCTGGCTGGCTTCTGTGCAACTGGTTTCATGAGCTTAACCCCCTTGTTGTTGGTCTGTCCTTAAGCCCAGATGAATATGGAATTATTACAAGGCATGAAATCAGAAGGAAATTGGATAGTTTGGTTGCCGATGATGGTATAAGAGCCAATGCATTAAAGCTCAAAGAAATGGCTGAACAGAGTATCAATGAAGGAGGATCTTCTGTAAGGAATTTGGACAACTTCATTCTACAGATGAAGCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

305

Amino Acids

34.17

Weight (kDa)

5.18

Isoelectric Point (pI)

41.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013674)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g14061 FvH4_5g14161 FvH4_5g14161
malus_domestica MD06G1200500.v1.1
prunus_persica Prupe.5G203300_v2.0.a1
pyrus_communis pycom06g17710
rosa_chinensis RchiOBHm_Chr7g0182751
rosa_laevigata RLG00000005103
rosa_multiflora Rmu_sc0000014.1_g000032 Rmu_sc0024464.1_g000002
rosa_roxburghii Rroxscaffold_3G00271000 Rroxscaffold_5G00344510
rosa_rugosa Rorug06G0449900
rosa_samantha Rh7AG053700 Rh7BG053200 Rh7CG054800 Rh7DG053000
rosa_wichuraiana Rw7G004370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 576
AccB7I CCANNNNNTGG 1 cut(s) 395
AccBSI CCGCTC 2 cut(s) 24, 217
AciI CCGC 2 cut(s) 22, 217
AclWI GGATC 3 cut(s) 380, 535, 877
AcsI RAATTY 3 cut(s) 465, 601, 883
AfaI GTAC 2 cut(s) 233, 586
AfiI CCNNNNNNNGG 2 cut(s) 89, 395
AflII CTTAAG 1 cut(s) 733
AgsI TTSAA 2 cut(s) 554, 656
AhlI ACTAGT 1 cut(s) 581
AjnI CCWGG 2 cut(s) 316, 460
AjuI GAANNNNNNNTTGG 2 cut(s) 419, 451
AluBI AGCT 6 cut(s) 16, 289, 383, 496, 706, 832
AluI AGCT 6 cut(s) 16, 289, 383, 496, 706, 832
Alw26I GTCTC 1 cut(s) 413
AlwI GGATC 3 cut(s) 380, 535, 877
AlwNI CAGNNNCTG 1 cut(s) 245
AoxI GGCC 3 cut(s) 449, 471, 627
ApeKI GCWGC 1 cut(s) 191
ApoI RAATTY 3 cut(s) 465, 601, 883
AsuHPI GGTGA 2 cut(s) 379, 552
AsuII TTCGAA 1 cut(s) 533
BbvI GCAGC 1 cut(s) 178
BccI CCATC 5 cut(s) 181, 242, 500, 536, 800
BciT130I CCWGG 2 cut(s) 318, 462
BcoDI GTCTC 1 cut(s) 413
BcuI ACTAGT 1 cut(s) 581
BfaI CTAG 1 cut(s) 582
BfmI CTRYAG 2 cut(s) 192, 902
BfrI CTTAAG 1 cut(s) 733
BfuAI ACCTGC 1 cut(s) 576
BisI GCNGC 1 cut(s) 192
BlsI GCNGC 1 cut(s) 193
Bme1390I CCNGG 2 cut(s) 318, 462
BmrFI CCNGG 2 cut(s) 318, 462
BmsI GCATC 1 cut(s) 256
BoxI GACNNNNGTC 1 cut(s) 374
Bpu14I TTCGAA 1 cut(s) 533
BsaAI YACGTR 1 cut(s) 182
BsaJI CCNNGG 2 cut(s) 460, 624
Bsc4I CCNNNNNNNGG 2 cut(s) 89, 395
Bse1I ACTGG 2 cut(s) 616, 698
Bse3DI GCAATG 1 cut(s) 447
BseBI CCWGG 2 cut(s) 318, 462
BseDI CCNNGG 2 cut(s) 460, 624
BseGI GGATG 1 cut(s) 511
BseLI CCNNNNNNNGG 2 cut(s) 89, 395
BseMI GCAATG 1 cut(s) 447
BseMII CTCAG 2 cut(s) 308, 408
BseNI ACTGG 2 cut(s) 616, 698
BseXI GCAGC 1 cut(s) 178
BshFI GGCC 3 cut(s) 451, 473, 629
BslI CCNNNNNNNGG 2 cut(s) 89, 395
BsmAI GTCTC 1 cut(s) 413
BsmBI CGTCTC 1 cut(s) 413
BsmI GAATGC 1 cut(s) 651
BsnI GGCC 3 cut(s) 451, 473, 629
Bsp119I TTCGAA 1 cut(s) 533
Bsp143I GATC 4 cut(s) 43, 385, 527, 869
BspACI CCGC 2 cut(s) 22, 217
BspANI GGCC 3 cut(s) 451, 473, 629
BspCNI CTCAG 2 cut(s) 307, 409
BspHI TCATGA 1 cut(s) 700
BspMAI CTGCAG 1 cut(s) 196
BspMI ACCTGC 1 cut(s) 576
BspPI GGATC 3 cut(s) 380, 535, 877
BspT104I TTCGAA 1 cut(s) 533
BspTI CTTAAG 1 cut(s) 733
BsrBI CCGCTC 2 cut(s) 24, 217
BsrDI GCAATG 1 cut(s) 447
BsrI ACTGG 2 cut(s) 616, 698
BssECI CCNNGG 2 cut(s) 460, 624
BssMI GATC 4 cut(s) 43, 385, 527, 869
Bst2UI CCWGG 2 cut(s) 318, 462
Bst4CI ACNGT 2 cut(s) 241, 558
BstAFI CTTAAG 1 cut(s) 733
BstBAI YACGTR 1 cut(s) 182
BstBI TTCGAA 1 cut(s) 533
BstC8I GCNNGC 2 cut(s) 291, 680
BstDEI CTNAG 3 cut(s) 294, 417, 646
BstENI CCTNNNNNAGG 1 cut(s) 87
BstF5I GGATG 1 cut(s) 511
BstKTI GATC 4 cut(s) 46, 388, 530, 872
BstMAI GTCTC 1 cut(s) 413
BstMBI GATC 4 cut(s) 43, 385, 527, 869
BstNI CCWGG 2 cut(s) 318, 462
BstNSI RCATGY 1 cut(s) 179
BstPAI GACNNNNGTC 1 cut(s) 374
BstSCI CCNGG 2 cut(s) 316, 460
BstSFI CTRYAG 2 cut(s) 192, 902
BstV1I GCAGC 1 cut(s) 178
BstX2I RGATCY 2 cut(s) 527, 869
BstYI RGATCY 2 cut(s) 527, 869
BsuRI GGCC 3 cut(s) 451, 473, 629
BtsCI GGATG 1 cut(s) 511
BveI ACCTGC 1 cut(s) 576
Cac8I GCNNGC 2 cut(s) 291, 680
CaiI CAGNNNCTG 1 cut(s) 245
CciI TCATGA 1 cut(s) 700
Csp6I GTAC 2 cut(s) 232, 585
CviAII CATG 8 cut(s) 145, 176, 313, 352, 631, 664, 701, 767
CviQI GTAC 2 cut(s) 232, 585
DdeI CTNAG 3 cut(s) 294, 417, 646
DpnI GATC 4 cut(s) 45, 387, 529, 871
DpnII GATC 4 cut(s) 43, 385, 527, 869
EcoNI CCTNNNNNAGG 1 cut(s) 87
EcoRI GAATTC 1 cut(s) 465
EcoRII CCWGG 2 cut(s) 316, 460
EcoT22I ATGCAT 1 cut(s) 826
Esp3I CGTCTC 1 cut(s) 413
FaeI CATG 8 cut(s) 148, 179, 316, 355, 634, 667, 704, 770
FatI CATG 8 cut(s) 144, 175, 312, 351, 630, 663, 700, 766
FauI CCCGC 1 cut(s) 29
FauNDI CATATG 1 cut(s) 63
Fnu4HI GCNGC 1 cut(s) 192
FokI GGATG 1 cut(s) 518
Fsp4HI GCNGC 1 cut(s) 192
FspBI CTAG 1 cut(s) 582
GluI GCNGC 1 cut(s) 192
HaeIII GGCC 3 cut(s) 451, 473, 629
Hin1II CATG 8 cut(s) 148, 179, 316, 355, 634, 667, 704, 770
HincII GTYRAC 1 cut(s) 349
HindII GTYRAC 1 cut(s) 349
HindIII AAGCTT 1 cut(s) 494
HinfI GANTC 1 cut(s) 141
HphI GGTGA 2 cut(s) 379, 552
Hpy166II GTNNAC 1 cut(s) 349
Hpy188I TCNGA 5 cut(s) 43, 259, 297, 579, 776
Hpy188III TCNNGA 5 cut(s) 32, 47, 245, 609, 701
Hpy8I GTNNAC 1 cut(s) 349
HpyAV CCTTC 7 cut(s) 275, 337, 421, 462, 541, 771, 857
HpyCH4III ACNGT 2 cut(s) 241, 558
HpyCH4IV ACGT 1 cut(s) 181
HpyCH4V TGCA 6 cut(s) 173, 179, 194, 269, 690, 824
HpyF3I CTNAG 3 cut(s) 294, 417, 646
HpySE526I ACGT 1 cut(s) 181
Hsp92II CATG 8 cut(s) 148, 179, 316, 355, 634, 667, 704, 770
Kzo9I GATC 4 cut(s) 43, 385, 527, 869
Lsp1109I GCAGC 1 cut(s) 178
LweI GCATC 1 cut(s) 256
MaeI CTAG 1 cut(s) 582
MaeII ACGT 1 cut(s) 181
MaeIII GTNAC 3 cut(s) 148, 367, 558
MalI GATC 4 cut(s) 45, 387, 529, 871
MbiI CCGCTC 2 cut(s) 24, 217
MboI GATC 4 cut(s) 43, 385, 527, 869
MboII GAAGA 4 cut(s) 17, 272, 522, 864
MflI RGATCY 2 cut(s) 527, 869
MluCI AATT 8 cut(s) 126, 203, 465, 537, 601, 753, 782, 883
MnlI CCTC 5 cut(s) 349, 496, 585, 619, 860
Mph1103I ATGCAT 1 cut(s) 826
MseI TTAA 4 cut(s) 483, 708, 734, 827
MspCI CTTAAG 1 cut(s) 733
MspR9I CCNGG 2 cut(s) 318, 462
Mva1269I GAATGC 1 cut(s) 651
MvaI CCWGG 2 cut(s) 318, 462
NdeI CATATG 1 cut(s) 63
NdeII GATC 4 cut(s) 43, 385, 527, 869
NlaIII CATG 8 cut(s) 148, 179, 316, 355, 634, 667, 704, 770
NmeAIII GCCGAG 1 cut(s) 649
NmuCI GTSAC 3 cut(s) 148, 367, 558
NsiI ATGCAT 1 cut(s) 826
NspI RCATGY 1 cut(s) 179
NspV TTCGAA 1 cut(s) 533
PagI TCATGA 1 cut(s) 700
PctI GAATGC 1 cut(s) 651
PfeI GAWTC 1 cut(s) 141
PflMI CCANNNNNTGG 1 cut(s) 395
PkrI GCNGC 1 cut(s) 193
Ppu21I YACGTR 1 cut(s) 182
PshAI GACNNNNGTC 1 cut(s) 374
Psp6I CCWGG 2 cut(s) 316, 460
PspGI CCWGG 2 cut(s) 316, 460
PstI CTGCAG 1 cut(s) 196
PstNI CAGNNNCTG 1 cut(s) 245
PsuI RGATCY 2 cut(s) 527, 869
RsaI GTAC 2 cut(s) 233, 586
RsaNI GTAC 2 cut(s) 232, 585
SaqAI TTAA 4 cut(s) 483, 708, 734, 827
SatI GCNGC 1 cut(s) 192
Sau3AI GATC 4 cut(s) 43, 385, 527, 869
ScrFI CCNGG 2 cut(s) 318, 462
SfaNI GCATC 1 cut(s) 256
SfcI CTRYAG 2 cut(s) 192, 902
SfuI TTCGAA 1 cut(s) 533
SmlI CTYRAG 1 cut(s) 733
SmoI CTYRAG 1 cut(s) 733
SpeI ACTAGT 1 cut(s) 581
Sse9I AATT 8 cut(s) 126, 203, 465, 537, 601, 753, 782, 883
SsiI CCGC 2 cut(s) 22, 217
SspI AATATT 1 cut(s) 641
SspMI CTAG 1 cut(s) 582
StyD4I CCNGG 2 cut(s) 316, 460
TaaI ACNGT 2 cut(s) 241, 558
TaiI ACGT 1 cut(s) 184
TaqI TCGA 1 cut(s) 533
TasI AATT 8 cut(s) 126, 203, 465, 537, 601, 753, 782, 883
TfiI GAWTC 1 cut(s) 141
Tru1I TTAA 4 cut(s) 483, 708, 734, 827
Tru9I TTAA 4 cut(s) 483, 708, 734, 827
TseFI GTSAC 3 cut(s) 148, 367, 558
TseI GCWGC 1 cut(s) 191
Tsp45I GTSAC 3 cut(s) 148, 367, 558
TspDTI ATGAA 9 cut(s) 97, 294, 440, 680, 689, 759, 783, 876, 886
TspGWI ACGGA 1 cut(s) 286
Van91I CCANNNNNTGG 1 cut(s) 395
Vha464I CTTAAG 1 cut(s) 733
XagI CCTNNNNNAGG 1 cut(s) 87
XapI RAATTY 3 cut(s) 465, 601, 883
XceI RCATGY 1 cut(s) 179
XcmI CCANNNNNNNNNTGG 1 cut(s) 396
XspI CTAG 1 cut(s) 582
Zsp2I ATGCAT 1 cut(s) 826
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.