protein kinase kinase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G32320 |
| fragaria_vesca | FvH4_5g22730 |
| prunus_persica | Prupe.5G031000_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr7g0211301 |
| rosa_laevigata | RLG00000003011 |
| rosa_multiflora | Rmu_sc0000006.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00247940 |
| rosa_rugosa | Rorug07G0124900 |
| rosa_samantha | Rh7AG257300 Rh7BG251400 Rh7CG274100 Rh7DG264500 |
| rosa_wichuraiana | Rw7G021990 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 342 |
| Acc36I | ACCTGC | 1 cut(s) | 433 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 758 |
| AccI | GTMKAC | 2 cut(s) | 150, 273 |
| AccII | CGCG | 1 cut(s) | 245 |
| AccIII | TCCGGA | 1 cut(s) | 334 |
| AciI | CCGC | 5 cut(s) | 219, 243, 254, 596, 813 |
| AclWI | GGATC | 2 cut(s) | 253, 650 |
| AcoI | YGGCCR | 4 cut(s) | 124, 601, 742, 782 |
| AfaI | GTAC | 5 cut(s) | 7, 159, 386, 625, 629 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 238, 268, 758, 763 |
| AgeI | ACCGGT | 1 cut(s) | 224 |
| AgsI | TTSAA | 3 cut(s) | 89, 193, 236 |
| AjiI | CACGTC | 1 cut(s) | 425 |
| AjnI | CCWGG | 1 cut(s) | 76 |
| AluBI | AGCT | 6 cut(s) | 17, 36, 174, 823, 916, 970 |
| AluI | AGCT | 6 cut(s) | 17, 36, 174, 823, 916, 970 |
| Alw21I | GWGCWC | 1 cut(s) | 972 |
| Alw26I | GTCTC | 1 cut(s) | 830 |
| AlwI | GGATC | 2 cut(s) | 253, 650 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 17 |
| Ama87I | CYCGRG | 1 cut(s) | 104 |
| Aor13HI | TCCGGA | 1 cut(s) | 334 |
| AoxI | GGCC | 6 cut(s) | 124, 240, 601, 742, 782, 840 |
| ApeKI | GCWGC | 4 cut(s) | 11, 14, 141, 415 |
| AsiGI | ACCGGT | 1 cut(s) | 224 |
| AspLEI | GCGC | 2 cut(s) | 247, 953 |
| AspS9I | GGNCC | 1 cut(s) | 761 |
| AsuC2I | CCSGG | 1 cut(s) | 44 |
| AsuHPI | GGTGA | 6 cut(s) | 16, 374, 592, 686, 837, 917 |
| AvaI | CYCGRG | 1 cut(s) | 104 |
| AvaII | GGWCC | 1 cut(s) | 761 |
| BalI | TGGCCA | 2 cut(s) | 126, 603 |
| BanII | GRGCYC | 1 cut(s) | 972 |
| Bbv12I | GWGCWC | 1 cut(s) | 972 |
| BbvI | GCAGC | 4 cut(s) | 23, 26, 153, 402 |
| BccI | CCATC | 2 cut(s) | 373, 680 |
| BceAI | ACGGC | 1 cut(s) | 855 |
| BciT130I | CCWGG | 1 cut(s) | 78 |
| BciVI | GTATCC | 1 cut(s) | 239 |
| BclI | TGATCA | 2 cut(s) | 327, 961 |
| BcnI | CCSGG | 1 cut(s) | 44 |
| BcoDI | GTCTC | 1 cut(s) | 830 |
| BfmI | CTRYAG | 1 cut(s) | 9 |
| BfuAI | ACCTGC | 1 cut(s) | 433 |
| BfuI | GTATCC | 1 cut(s) | 239 |
| BisI | GCNGC | 6 cut(s) | 12, 15, 142, 219, 243, 416 |
| BlsI | GCNGC | 6 cut(s) | 13, 16, 143, 220, 244, 417 |
| BmcAI | AGTACT | 1 cut(s) | 7 |
| Bme1390I | CCNGG | 2 cut(s) | 44, 78 |
| Bme18I | GGWCC | 1 cut(s) | 761 |
| BmeT110I | CYCGRG | 1 cut(s) | 104 |
| BmgBI | CACGTC | 1 cut(s) | 425 |
| BmgT120I | GGNCC | 1 cut(s) | 761 |
| BmrFI | CCNGG | 2 cut(s) | 44, 78 |
| BmsI | GCATC | 1 cut(s) | 819 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 827, 859 |
| BpmI | CTGGAG | 2 cut(s) | 60, 845 |
| BpuEI | CTTGAG | 2 cut(s) | 269, 899 |
| BpuMI | CCSGG | 1 cut(s) | 44 |
| BsaAI | YACGTR | 2 cut(s) | 286, 627 |
| BsaJI | CCNNGG | 3 cut(s) | 127, 475, 757 |
| BsaWI | WCCGGW | 8 cut(s) | 30, 201, 224, 334, 436, 763, 775, 847 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 238, 268, 758, 763 |
| Bse118I | RCCGGY | 2 cut(s) | 224, 744 |
| Bse1I | ACTGG | 2 cut(s) | 273, 785 |
| Bse3DI | GCAATG | 1 cut(s) | 737 |
| BseAI | TCCGGA | 1 cut(s) | 334 |
| BseBI | CCWGG | 1 cut(s) | 78 |
| BseDI | CCNNGG | 3 cut(s) | 127, 475, 757 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 238, 268, 758, 763 |
| BseMI | GCAATG | 1 cut(s) | 737 |
| BseMII | CTCAG | 1 cut(s) | 636 |
| BseNI | ACTGG | 2 cut(s) | 273, 785 |
| BseRI | GAGGAG | 1 cut(s) | 527 |
| BseXI | GCAGC | 4 cut(s) | 23, 26, 153, 402 |
| BseYI | CCCAGC | 1 cut(s) | 55 |
| BsgI | GTGCAG | 1 cut(s) | 467 |
| Bsh1236I | CGCG | 1 cut(s) | 245 |
| BshFI | GGCC | 6 cut(s) | 126, 242, 603, 744, 784, 842 |
| BshTI | ACCGGT | 1 cut(s) | 224 |
| BsiHKAI | GWGCWC | 1 cut(s) | 972 |
| BsiHKCI | CYCGRG | 1 cut(s) | 104 |
| BsiWI | CGTACG | 1 cut(s) | 627 |
| BslFI | GGGAC | 2 cut(s) | 37, 530 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 238, 268, 758, 763 |
| BsmAI | GTCTC | 1 cut(s) | 830 |
| BsmBI | CGTCTC | 1 cut(s) | 830 |
| BsmFI | GGGAC | 2 cut(s) | 37, 530 |
| BsnI | GGCC | 6 cut(s) | 126, 242, 603, 744, 784, 842 |
| BsoBI | CYCGRG | 1 cut(s) | 104 |
| Bsp1286I | GDGCHC | 1 cut(s) | 972 |
| Bsp13I | TCCGGA | 1 cut(s) | 334 |
| Bsp143I | GATC | 6 cut(s) | 100, 258, 327, 558, 655, 961 |
| BspACI | CCGC | 5 cut(s) | 219, 243, 254, 596, 813 |
| BspANI | GGCC | 6 cut(s) | 126, 242, 603, 744, 784, 842 |
| BspCNI | CTCAG | 1 cut(s) | 637 |
| BspEI | TCCGGA | 1 cut(s) | 334 |
| BspFNI | CGCG | 1 cut(s) | 245 |
| BspHI | TCATGA | 1 cut(s) | 324 |
| BspMAI | CTGCAG | 1 cut(s) | 13 |
| BspMI | ACCTGC | 1 cut(s) | 433 |
| BspPI | GGATC | 2 cut(s) | 253, 650 |
| BsrDI | GCAATG | 1 cut(s) | 737 |
| BsrFI | RCCGGY | 2 cut(s) | 224, 744 |
| BsrI | ACTGG | 2 cut(s) | 273, 785 |
| BssAI | RCCGGY | 2 cut(s) | 224, 744 |
| BssECI | CCNNGG | 3 cut(s) | 127, 475, 757 |
| BssMI | GATC | 6 cut(s) | 100, 258, 327, 558, 655, 961 |
| BssT1I | CCWWGG | 2 cut(s) | 475, 757 |
| Bst2UI | CCWGG | 1 cut(s) | 78 |
| Bst4CI | ACNGT | 2 cut(s) | 51, 148 |
| Bst6I | CTCTTC | 1 cut(s) | 890 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 412, 508 |
| BstBAI | YACGTR | 2 cut(s) | 286, 627 |
| BstC8I | GCNNGC | 1 cut(s) | 420 |
| BstDEI | CTNAG | 1 cut(s) | 645 |
| BstDSI | CCRYGG | 1 cut(s) | 127 |
| BstEII | GGTNACC | 1 cut(s) | 432 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 236 |
| BstFNI | CGCG | 1 cut(s) | 245 |
| BstHHI | GCGC | 2 cut(s) | 247, 953 |
| BstKTI | GATC | 6 cut(s) | 103, 261, 330, 561, 658, 964 |
| BstMAI | GTCTC | 1 cut(s) | 830 |
| BstMBI | GATC | 6 cut(s) | 100, 258, 327, 558, 655, 961 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 251, 412, 508, 741, 829 |
| BstNI | CCWGG | 1 cut(s) | 78 |
| BstNSI | RCATGY | 1 cut(s) | 497 |
| BstPI | GGTNACC | 1 cut(s) | 432 |
| BstSCI | CCNGG | 2 cut(s) | 42, 76 |
| BstSFI | CTRYAG | 1 cut(s) | 9 |
| BstSNI | TACGTA | 2 cut(s) | 286, 627 |
| BstUI | CGCG | 1 cut(s) | 245 |
| BstV1I | GCAGC | 4 cut(s) | 23, 26, 153, 402 |
| BstX2I | RGATCY | 1 cut(s) | 258 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 666 |
| BstYI | RGATCY | 1 cut(s) | 258 |
| BsuI | GTATCC | 1 cut(s) | 239 |
| BsuRI | GGCC | 6 cut(s) | 126, 242, 603, 744, 784, 842 |
| BtgI | CCRYGG | 1 cut(s) | 127 |
| BtrI | CACGTC | 1 cut(s) | 425 |
| BtsI | GCAGTG | 1 cut(s) | 401 |
| BtsIMutI | CAGTG | 3 cut(s) | 47, 144, 401 |
| BveI | ACCTGC | 1 cut(s) | 433 |
| Cac8I | GCNNGC | 1 cut(s) | 420 |
| CaiI | CAGNNNCTG | 1 cut(s) | 17 |
| CciI | TCATGA | 1 cut(s) | 324 |
| CfoI | GCGC | 2 cut(s) | 247, 953 |
| Cfr10I | RCCGGY | 2 cut(s) | 224, 744 |
| Cfr13I | GGNCC | 1 cut(s) | 761 |
| Csp6I | GTAC | 5 cut(s) | 6, 158, 385, 624, 628 |
| CspAI | ACCGGT | 1 cut(s) | 224 |
| CviAII | CATG | 8 cut(s) | 177, 325, 359, 388, 494, 499, 605, 637 |
| CviQI | GTAC | 5 cut(s) | 6, 158, 385, 624, 628 |
| DdeI | CTNAG | 1 cut(s) | 645 |
| DpnI | GATC | 6 cut(s) | 102, 260, 329, 560, 657, 963 |
| DpnII | GATC | 6 cut(s) | 100, 258, 327, 558, 655, 961 |
| EaeI | YGGCCR | 4 cut(s) | 124, 601, 742, 782 |
| Eam1104I | CTCTTC | 1 cut(s) | 890 |
| EarI | CTCTTC | 1 cut(s) | 890 |
| EciI | GGCGGA | 1 cut(s) | 269 |
| Ecl136II | GAGCTC | 1 cut(s) | 970 |
| Eco105I | TACGTA | 2 cut(s) | 286, 627 |
| Eco130I | CCWWGG | 2 cut(s) | 475, 757 |
| Eco24I | GRGCYC | 1 cut(s) | 972 |
| Eco47I | GGWCC | 1 cut(s) | 761 |
| Eco53kI | GAGCTC | 1 cut(s) | 970 |
| Eco88I | CYCGRG | 1 cut(s) | 104 |
| Eco91I | GGTNACC | 1 cut(s) | 432 |
| EcoICRI | GAGCTC | 1 cut(s) | 970 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 236 |
| EcoO65I | GGTNACC | 1 cut(s) | 432 |
| EcoRII | CCWGG | 1 cut(s) | 76 |
| EcoT14I | CCWWGG | 2 cut(s) | 475, 757 |
| EcoT22I | ATGCAT | 1 cut(s) | 182 |
| EcoT38I | GRGCYC | 1 cut(s) | 972 |
| ErhI | CCWWGG | 2 cut(s) | 475, 757 |
| Esp3I | CGTCTC | 1 cut(s) | 830 |
| FaeI | CATG | 8 cut(s) | 180, 328, 362, 391, 497, 502, 608, 640 |
| FaqI | GGGAC | 2 cut(s) | 37, 530 |
| FatI | CATG | 8 cut(s) | 176, 324, 358, 387, 493, 498, 604, 636 |
| FauI | CCCGC | 2 cut(s) | 589, 806 |
| FbaI | TGATCA | 2 cut(s) | 327, 961 |
| FblI | GTMKAC | 2 cut(s) | 150, 273 |
| Fnu4HI | GCNGC | 6 cut(s) | 12, 15, 142, 219, 243, 416 |
| FriOI | GRGCYC | 1 cut(s) | 972 |
| Fsp4HI | GCNGC | 6 cut(s) | 12, 15, 142, 219, 243, 416 |
| GlaI | GCGC | 2 cut(s) | 246, 952 |
| GluI | GCNGC | 6 cut(s) | 12, 15, 142, 219, 243, 416 |
| GsaI | CCCAGC | 1 cut(s) | 59 |
| GsuI | CTGGAG | 2 cut(s) | 60, 845 |
| HaeIII | GGCC | 6 cut(s) | 126, 242, 603, 744, 784, 842 |
| HhaI | GCGC | 2 cut(s) | 247, 953 |
| Hin1II | CATG | 8 cut(s) | 180, 328, 362, 391, 497, 502, 608, 640 |
| Hin6I | GCGC | 2 cut(s) | 245, 951 |
| HinP1I | GCGC | 2 cut(s) | 245, 951 |
| HincII | GTYRAC | 1 cut(s) | 274 |
| HindII | GTYRAC | 1 cut(s) | 274 |
| HinfI | GANTC | 4 cut(s) | 71, 275, 583, 640 |
| HphI | GGTGA | 6 cut(s) | 16, 374, 592, 686, 837, 917 |
| Hpy166II | GTNNAC | 3 cut(s) | 151, 274, 925 |
| Hpy188I | TCNGA | 3 cut(s) | 100, 429, 858 |
| Hpy8I | GTNNAC | 3 cut(s) | 151, 274, 925 |
| Hpy99I | CGWCG | 1 cut(s) | 790 |
| HpyAV | CCTTC | 4 cut(s) | 242, 347, 386, 877 |
| HpyCH4III | ACNGT | 2 cut(s) | 51, 148 |
| HpyCH4IV | ACGT | 6 cut(s) | 160, 285, 424, 626, 738, 788 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 251, 412, 508, 741, 829 |
| HpyF3I | CTNAG | 1 cut(s) | 645 |
| HpySE526I | ACGT | 6 cut(s) | 160, 285, 424, 626, 738, 788 |
| Hsp92II | CATG | 8 cut(s) | 180, 328, 362, 391, 497, 502, 608, 640 |
| HspAI | GCGC | 2 cut(s) | 245, 951 |
| Kpn2I | TCCGGA | 1 cut(s) | 334 |
| Ksp22I | TGATCA | 2 cut(s) | 327, 961 |
| Kzo9I | GATC | 6 cut(s) | 100, 258, 327, 558, 655, 961 |
| LmnI | GCTCC | 3 cut(s) | 33, 439, 766 |
| Lsp1109I | GCAGC | 4 cut(s) | 23, 26, 153, 402 |
| LweI | GCATC | 1 cut(s) | 819 |
| MaeII | ACGT | 6 cut(s) | 160, 285, 424, 626, 738, 788 |
| MaeIII | GTNAC | 6 cut(s) | 161, 296, 432, 584, 674, 708 |
| MalI | GATC | 6 cut(s) | 102, 260, 329, 560, 657, 963 |
| MboI | GATC | 6 cut(s) | 100, 258, 327, 558, 655, 961 |
| MboII | GAAGA | 2 cut(s) | 31, 907 |
| MflI | RGATCY | 1 cut(s) | 258 |
| MhlI | GDGCHC | 1 cut(s) | 972 |
| MlsI | TGGCCA | 2 cut(s) | 126, 603 |
| MluCI | AATT | 1 cut(s) | 975 |
| MluNI | TGGCCA | 2 cut(s) | 126, 603 |
| MlyI | GAGTC | 4 cut(s) | 65, 269, 592, 649 |
| MmeI | TCCRAC | 1 cut(s) | 289 |
| Mox20I | TGGCCA | 2 cut(s) | 126, 603 |
| Mph1103I | ATGCAT | 1 cut(s) | 182 |
| MroI | TCCGGA | 1 cut(s) | 334 |
| MscI | TGGCCA | 2 cut(s) | 126, 603 |
| MseI | TTAA | 1 cut(s) | 207 |
| Msp20I | TGGCCA | 2 cut(s) | 126, 603 |
| MspA1I | CMGCKG | 1 cut(s) | 17 |
| MspR9I | CCNGG | 2 cut(s) | 44, 78 |
| MvaI | CCWGG | 1 cut(s) | 78 |
| MvnI | CGCG | 1 cut(s) | 245 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 251, 412, 508, 741, 829 |
| NciI | CCSGG | 1 cut(s) | 44 |
| NdeII | GATC | 6 cut(s) | 100, 258, 327, 558, 655, 961 |
| NlaIII | CATG | 8 cut(s) | 180, 328, 362, 391, 497, 502, 608, 640 |
| NmuCI | GTSAC | 5 cut(s) | 161, 296, 584, 674, 708 |
| NsiI | ATGCAT | 1 cut(s) | 182 |
| NspI | RCATGY | 1 cut(s) | 497 |
| PaeR7I | CTCGAG | 1 cut(s) | 104 |
| PagI | TCATGA | 1 cut(s) | 324 |
| Pfl23II | CGTACG | 1 cut(s) | 627 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 758 |
| PinAI | ACCGGT | 1 cut(s) | 224 |
| PkrI | GCNGC | 6 cut(s) | 13, 16, 143, 220, 244, 417 |
| PleI | GAGTC | 4 cut(s) | 65, 269, 591, 648 |
| PpsI | GAGTC | 4 cut(s) | 65, 269, 591, 648 |
| Ppu21I | YACGTR | 2 cut(s) | 286, 627 |
| PsiI | TTATAA | 1 cut(s) | 342 |
| Psp124BI | GAGCTC | 1 cut(s) | 972 |
| Psp6I | CCWGG | 1 cut(s) | 76 |
| PspEI | GGTNACC | 1 cut(s) | 432 |
| PspFI | CCCAGC | 1 cut(s) | 55 |
| PspGI | CCWGG | 1 cut(s) | 76 |
| PspLI | CGTACG | 1 cut(s) | 627 |
| PspPI | GGNCC | 1 cut(s) | 761 |
| PstI | CTGCAG | 1 cut(s) | 13 |
| PstNI | CAGNNNCTG | 1 cut(s) | 17 |
| PsuI | RGATCY | 1 cut(s) | 258 |
| PvuII | CAGCTG | 1 cut(s) | 17 |
| RsaI | GTAC | 5 cut(s) | 7, 159, 386, 625, 629 |
| RsaNI | GTAC | 5 cut(s) | 6, 158, 385, 624, 628 |
| SacI | GAGCTC | 1 cut(s) | 972 |
| SalI | GTCGAC | 1 cut(s) | 272 |
| SaqAI | TTAA | 1 cut(s) | 207 |
| SatI | GCNGC | 6 cut(s) | 12, 15, 142, 219, 243, 416 |
| Sau3AI | GATC | 6 cut(s) | 100, 258, 327, 558, 655, 961 |
| Sau96I | GGNCC | 1 cut(s) | 761 |
| ScaI | AGTACT | 1 cut(s) | 7 |
| SchI | GAGTC | 4 cut(s) | 65, 269, 592, 649 |
| ScrFI | CCNGG | 2 cut(s) | 44, 78 |
| SduI | GDGCHC | 1 cut(s) | 972 |
| SfaNI | GCATC | 1 cut(s) | 819 |
| SfcI | CTRYAG | 1 cut(s) | 9 |
| Sfr274I | CTCGAG | 1 cut(s) | 104 |
| SinI | GGWCC | 1 cut(s) | 761 |
| SlaI | CTCGAG | 1 cut(s) | 104 |
| SmlI | CTYRAG | 3 cut(s) | 104, 248, 878 |
| SmoI | CTYRAG | 3 cut(s) | 104, 248, 878 |
| SnaBI | TACGTA | 2 cut(s) | 286, 627 |
| Sse9I | AATT | 1 cut(s) | 975 |
| SsiI | CCGC | 5 cut(s) | 219, 243, 254, 596, 813 |
| SstI | GAGCTC | 1 cut(s) | 972 |
| StyD4I | CCNGG | 2 cut(s) | 42, 76 |
| StyI | CCWWGG | 2 cut(s) | 475, 757 |
| TaaI | ACNGT | 2 cut(s) | 51, 148 |
| TaiI | ACGT | 6 cut(s) | 163, 288, 427, 629, 741, 791 |
| TaqI | TCGA | 3 cut(s) | 105, 273, 530 |
| TasI | AATT | 1 cut(s) | 975 |
| TatI | WGTACW | 2 cut(s) | 5, 384 |
| TauI | GCSGC | 2 cut(s) | 221, 245 |
| Tru1I | TTAA | 1 cut(s) | 207 |
| Tru9I | TTAA | 1 cut(s) | 207 |
| TscAI | CASTG | 3 cut(s) | 54, 151, 408 |
| TseFI | GTSAC | 5 cut(s) | 161, 296, 584, 674, 708 |
| TseI | GCWGC | 4 cut(s) | 11, 14, 141, 415 |
| Tsp45I | GTSAC | 5 cut(s) | 161, 296, 584, 674, 708 |
| TspDTI | ATGAA | 3 cut(s) | 313, 366, 853 |
| TspRI | CASTG | 3 cut(s) | 54, 151, 408 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 758 |
| VpaK11BI | GGWCC | 1 cut(s) | 761 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 236 |
| XceI | RCATGY | 1 cut(s) | 497 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 134 |
| XhoI | CTCGAG | 1 cut(s) | 104 |
| XmiI | GTMKAC | 2 cut(s) | 150, 273 |
| ZrmI | AGTACT | 1 cut(s) | 7 |
| Zsp2I | ATGCAT | 1 cut(s) | 182 |