Prupe.5G031000_v2.0.a1

protein kinase kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0017119
Physical Location & Seq
Reverse (-)
3540131 .. 3541165
1035 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G031000.1

Sequence Viewer

Length: 1035 bp
ATGACACTGGTGAGAGAGAGAAGGCACCAACAAGCACTAAGGCTCTCCCCACTGCCACCGGATGTTACTCCGGTAGCAGCTGATCATTTCAGGCAGCAGAGGACTACTGCTCCTACTTCTACTCCTGACTCTCCAGCCAATGTGGAAAACCTCTCTGACCTTGAGAAACTGGAAGTTCTTGGACATGGCAATGGCGGCACTGTTTATAAAGTGTGTCACATGAAAACCTCAACCATTTACGCGTTGAAAGTCCTCCGTTTCGACCACAATGGCACCGGTATCTTGCAACAAGCGGCCCGTGAGGCGGAGATCCTTAAGCTAGTGGACTCACCCTATGTCATTAGATGCCATGGGGTTTTTGACAATAATGGCTTCATGAGTAGTACTAGTGATCACAATGATGGTGGGGGTGATTTGTGTTTTGTGATGGAGTATATGGAAGGAGGCTCGCTGCTCGATGTGCTGCGAGCACGCCAGAGATTGCCTGAGCACGTAATCTCTAGCGTGGCAAAGCGTGTCCTTCAAGGACTGCACTATCTGCATGCCATGCAGATAGTGCATAGGGACATAAAGCCCTCAAACCTGCTCATAAATGGTAGAGGCCAAGTGAAAATTGCAGATTTCGGGGTGAGCCATGTTGTGGCAGGTGCCCGTGAGGCGTGCGACTCCTACATGGGCACTTACGCTTACATGAGCCCCGAAAGGTTTGATCCAGAGCGGTGGGGCGGTGATAATGCGGATGGGTTTGCCGGTGATGTGTGGTCACTTGGATTGGTGGCGTTGCAATGTCACATGGGTCATTTCCCACTGATTACTCCTGAGCAGAAACCAGATTGGGCAACTTTAATGTGTGTGATATGCTTTGGAGAGGAGGTGGAGATGCCGGAGACGGCATCCCCGGAATTTCGGAGTTTCATTTGGAGATGTGTGGAGAAGGATTGGAGGAAGAGAGCAACTGTTGATGAGCTTCTTGACCACCCTTTTGTCAATAAAACTTGCTGCTCTTCCACTGACGACTTGGTTGATTATGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000165 GO:0000187 GO:0001932 GO:0001934 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004708 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006521 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007275 GO:0007346 GO:0008150 GO:0008152 GO:0008219 GO:0009605 GO:0009607 GO:0009626 GO:0009791 GO:0009814 GO:0009838 GO:0009889 GO:0009891 GO:0009893 GO:0009908 GO:0009966 GO:0009967 GO:0009987 GO:0010227 GO:0010229 GO:0010364 GO:0010365 GO:0010562 GO:0010565 GO:0010604 GO:0010646 GO:0010647 GO:0010817 GO:0012501 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0022414 GO:0023014 GO:0023051 GO:0023052 GO:0023056 GO:0031098 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031335 GO:0031337 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0032350 GO:0032352 GO:0032501 GO:0032502 GO:0033238 GO:0033240 GO:0033554 GO:0033674 GO:0034050 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0042762 GO:0043085 GO:0043170 GO:0043207 GO:0043405 GO:0043406 GO:0043408 GO:0043410 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045087 GO:0045764 GO:0045859 GO:0045860 GO:0045937 GO:0046885 GO:0046886 GO:0048367 GO:0048437 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051176 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051704 GO:0051707 GO:0051716 GO:0051726 GO:0060255 GO:0061458 GO:0062012 GO:0062013 GO:0065007 GO:0065008 GO:0065009 GO:0071704 GO:0071900 GO:0071902 GO:0080090 GO:0090567 GO:0098542 GO:0099402 GO:0140096 GO:1900908 GO:1900910 GO:1900911 GO:1900913 GO:1901564 GO:1902531 GO:1902533
KEGG Pathways
Metabolic & Signaling
ko04016 map04016
Pfam Domains
Protein Families
Pkinase

Protein Analysis

345

Amino Acids

38.44

Weight (kDa)

5.74

Isoelectric Point (pI)

51.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017119)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32320
fragaria_vesca FvH4_5g22730
prunus_persica Prupe.5G031000_v2.0.a1
rosa_chinensis RchiOBHm_Chr7g0211301
rosa_laevigata RLG00000003011
rosa_multiflora Rmu_sc0000006.1_g000001
rosa_roxburghii Rroxscaffold_3G00247940
rosa_rugosa Rorug07G0124900
rosa_samantha Rh7AG257300 Rh7BG251400 Rh7CG274100 Rh7DG264500
rosa_wichuraiana Rw7G021990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 207
AarI CACCTGC 1 cut(s) 635
Acc36I ACCTGC 2 cut(s) 591, 635
AccB1I GGYRCC 3 cut(s) 24, 272, 647
AccB7I CCANNNNNTGG 1 cut(s) 640
AccBSI CCGCTC 1 cut(s) 718
AccII CGCG 1 cut(s) 242
AciI CCGC 6 cut(s) 195, 293, 305, 718, 726, 737
AclWI GGATC 2 cut(s) 304, 704
AcsI RAATTY 1 cut(s) 902
AfaI GTAC 1 cut(s) 385
AfiI CCNNNNNNNGG 2 cut(s) 304, 640
AflII CTTAAG 1 cut(s) 314
AflIII ACRYGT 1 cut(s) 240
AgeI ACCGGT 1 cut(s) 275
AgsI TTSAA 2 cut(s) 247, 524
AhlI ACTAGT 1 cut(s) 386
AluBI AGCT 3 cut(s) 80, 319, 967
AluI AGCT 3 cut(s) 80, 319, 967
Alw21I GWGCWC 2 cut(s) 472, 492
Alw26I GTCTC 1 cut(s) 881
AlwI GGATC 2 cut(s) 304, 704
AoxI GGCC 2 cut(s) 294, 601
ApeKI GCWGC 5 cut(s) 77, 94, 451, 463, 999
ApoI RAATTY 1 cut(s) 902
ArsI GACNNNNNNTTYG 2 cut(s) 965, 997
AsiGI ACCGGT 1 cut(s) 275
AspS9I GGNCC 1 cut(s) 295
AsuC2I CCSGG 1 cut(s) 899
AsuHPI GGTGA 6 cut(s) 22, 321, 422, 640, 740, 764
BaeGI GKGCMC 2 cut(s) 652, 680
BanI GGYRCC 3 cut(s) 24, 272, 647
BanII GRGCYC 1 cut(s) 698
Bbv12I GWGCWC 2 cut(s) 472, 492
BbvI GCAGC 5 cut(s) 89, 106, 438, 450, 986
BccI CCATC 3 cut(s) 395, 421, 734
BceAI ACGGC 1 cut(s) 906
BclI TGATCA 2 cut(s) 82, 391
BcnI CCSGG 1 cut(s) 899
BcoDI GTCTC 1 cut(s) 881
BcuI ACTAGT 1 cut(s) 386
BfaI CTAG 3 cut(s) 320, 387, 501
BfrI CTTAAG 1 cut(s) 314
BfuAI ACCTGC 2 cut(s) 591, 635
BglI GCCNNNNNGGC 2 cut(s) 302, 656
BisI GCNGC 7 cut(s) 78, 95, 196, 294, 452, 464, 1000
BlsI GCNGC 7 cut(s) 79, 96, 197, 295, 453, 465, 1001
BmcAI AGTACT 1 cut(s) 385
Bme1390I CCNGG 1 cut(s) 899
BmgT120I GGNCC 1 cut(s) 295
BmiI GGNNCC 3 cut(s) 26, 274, 649
BmrFI CCNGG 1 cut(s) 899
BmsI GCATC 3 cut(s) 335, 870, 902
BpmI CTGGAG 1 cut(s) 117
Bpu10I CCTNAGC 2 cut(s) 486, 819
BpuEI CTTGAG 1 cut(s) 182
BpuMI CCSGG 1 cut(s) 899
BsaAI YACGTR 1 cut(s) 493
BsaJI CCNNGG 2 cut(s) 349, 897
BsaWI WCCGGW 3 cut(s) 58, 70, 275
BsaXI ACNNNNNCTCC 6 cut(s) 94, 106, 124, 136, 858, 888
Bsc4I CCNNNNNNNGG 2 cut(s) 304, 640
Bse118I RCCGGY 2 cut(s) 275, 749
Bse1I ACTGG 2 cut(s) 12, 174
Bse3DI GCAATG 2 cut(s) 196, 791
BseDI CCNNGG 2 cut(s) 349, 897
BseGI GGATG 3 cut(s) 67, 745, 893
BseLI CCNNNNNNNGG 2 cut(s) 304, 640
BseMI GCAATG 2 cut(s) 196, 791
BseMII CTCAG 2 cut(s) 477, 810
BseNI ACTGG 2 cut(s) 12, 174
BseRI GAGGAG 1 cut(s) 884
BseSI GKGCMC 2 cut(s) 652, 680
BseXI GCAGC 5 cut(s) 89, 106, 438, 450, 986
BsgI GTGCAG 1 cut(s) 515
Bsh1236I CGCG 1 cut(s) 242
BshFI GGCC 2 cut(s) 296, 603
BshNI GGYRCC 3 cut(s) 24, 272, 647
BshTI ACCGGT 1 cut(s) 275
BsiHKAI GWGCWC 2 cut(s) 472, 492
BsiSI CCGG 6 cut(s) 59, 71, 276, 750, 884, 899
BslFI GGGAC 1 cut(s) 578
BslI CCNNNNNNNGG 2 cut(s) 304, 640
BsmAI GTCTC 1 cut(s) 881
BsmBI CGTCTC 1 cut(s) 881
BsmFI GGGAC 1 cut(s) 578
BsnI GGCC 2 cut(s) 296, 603
Bsp1286I GDGCHC 5 cut(s) 472, 492, 652, 680, 698
Bsp143I GATC 4 cut(s) 82, 309, 391, 709
Bsp19I CCATGG 1 cut(s) 349
BspACI CCGC 6 cut(s) 195, 293, 305, 718, 726, 737
BspANI GGCC 2 cut(s) 296, 603
BspCNI CTCAG 2 cut(s) 478, 811
BspFNI CGCG 1 cut(s) 242
BspHI TCATGA 1 cut(s) 375
BspLI GGNNCC 3 cut(s) 26, 274, 649
BspMI ACCTGC 2 cut(s) 591, 635
BspPI GGATC 2 cut(s) 304, 704
BspQI GCTCTTC 1 cut(s) 1009
BspT107I GGYRCC 3 cut(s) 24, 272, 647
BspTI CTTAAG 1 cut(s) 314
BsrBI CCGCTC 1 cut(s) 718
BsrDI GCAATG 2 cut(s) 196, 791
BsrFI RCCGGY 2 cut(s) 275, 749
BsrI ACTGG 2 cut(s) 12, 174
BssAI RCCGGY 2 cut(s) 275, 749
BssECI CCNNGG 2 cut(s) 349, 897
BssMI GATC 4 cut(s) 82, 309, 391, 709
BssT1I CCWWGG 1 cut(s) 349
Bst4CI ACNGT 2 cut(s) 202, 958
Bst6I CTCTTC 2 cut(s) 941, 1009
BstAFI CTTAAG 1 cut(s) 314
BstAPI GCANNNNNTGC 3 cut(s) 538, 547, 556
BstBAI YACGTR 1 cut(s) 493
BstC8I GCNNGC 5 cut(s) 449, 468, 472, 543, 661
BstDEI CTNAG 3 cut(s) 38, 486, 819
BstDSI CCRYGG 1 cut(s) 349
BstF5I GGATG 3 cut(s) 67, 745, 893
BstFNI CGCG 1 cut(s) 242
BstKTI GATC 4 cut(s) 85, 312, 394, 712
BstMAI GTCTC 1 cut(s) 881
BstMBI GATC 4 cut(s) 82, 309, 391, 709
BstMWI GCNNNNNNNGC 7 cut(s) 195, 302, 460, 538, 547, 556, 656
BstNSI RCATGY 1 cut(s) 545
BstSCI CCNGG 1 cut(s) 897
BstSLI GKGCMC 2 cut(s) 652, 680
BstUI CGCG 1 cut(s) 242
BstV1I GCAGC 5 cut(s) 89, 106, 438, 450, 986
BstX2I RGATCY 1 cut(s) 309
BstXI CCANNNNNNTGG 1 cut(s) 720
BstYI RGATCY 1 cut(s) 309
BsuRI GGCC 2 cut(s) 296, 603
BtgI CCRYGG 1 cut(s) 349
BtsCI GGATG 3 cut(s) 67, 745, 893
BtsI GCAGTG 1 cut(s) 50
BtsIMutI CAGTG 5 cut(s) 5, 50, 198, 806, 1008
BveI ACCTGC 2 cut(s) 591, 635
Cac8I GCNNGC 5 cut(s) 449, 468, 472, 543, 661
CciI TCATGA 1 cut(s) 375
Cfr10I RCCGGY 2 cut(s) 275, 749
Cfr13I GGNCC 1 cut(s) 295
Csp6I GTAC 1 cut(s) 384
CspAI ACCGGT 1 cut(s) 275
CspCI CAANNNNNGTGG 2 cut(s) 385, 420
CviQI GTAC 1 cut(s) 384
DdeI CTNAG 3 cut(s) 38, 486, 819
DpnI GATC 4 cut(s) 84, 311, 393, 711
DpnII GATC 4 cut(s) 82, 309, 391, 709
Eam1104I CTCTTC 2 cut(s) 941, 1009
EarI CTCTTC 2 cut(s) 941, 1009
EciI GGCGGA 1 cut(s) 320
Eco130I CCWWGG 1 cut(s) 349
Eco24I GRGCYC 1 cut(s) 698
EcoT14I CCWWGG 1 cut(s) 349
EcoT38I GRGCYC 1 cut(s) 698
ErhI CCWWGG 1 cut(s) 349
Esp3I CGTCTC 1 cut(s) 881
FaqI GGGAC 1 cut(s) 578
FbaI TGATCA 2 cut(s) 82, 391
Fnu4HI GCNGC 7 cut(s) 78, 95, 196, 294, 452, 464, 1000
FokI GGATG 3 cut(s) 74, 752, 880
FriOI GRGCYC 1 cut(s) 698
Fsp4HI GCNGC 7 cut(s) 78, 95, 196, 294, 452, 464, 1000
FspBI CTAG 3 cut(s) 320, 387, 501
GluI GCNGC 7 cut(s) 78, 95, 196, 294, 452, 464, 1000
GsuI CTGGAG 1 cut(s) 117
HaeIII GGCC 2 cut(s) 296, 603
HapII CCGG 6 cut(s) 59, 71, 276, 750, 884, 899
HinfI GANTC 3 cut(s) 128, 326, 665
HpaII CCGG 6 cut(s) 59, 71, 276, 750, 884, 899
HphI GGTGA 6 cut(s) 22, 321, 422, 640, 740, 764
Hpy166II GTNNAC 1 cut(s) 325
Hpy188I TCNGA 2 cut(s) 157, 909
Hpy188III TCNNGA 5 cut(s) 125, 376, 713, 818, 971
Hpy8I GTNNAC 1 cut(s) 325
HpyAV CCTTC 4 cut(s) 15, 434, 530, 928
HpyCH4III ACNGT 2 cut(s) 202, 958
HpyCH4IV ACGT 1 cut(s) 492
HpyCH4V TGCA 7 cut(s) 286, 532, 541, 550, 559, 617, 784
HpyF10VI GCNNNNNNNGC 7 cut(s) 195, 302, 460, 538, 547, 556, 656
HpyF3I CTNAG 3 cut(s) 38, 486, 819
HpySE526I ACGT 1 cut(s) 492
Ksp22I TGATCA 2 cut(s) 82, 391
Kzo9I GATC 4 cut(s) 82, 309, 391, 709
LguI GCTCTTC 1 cut(s) 1009
LmnI GCTCC 1 cut(s) 115
Lsp1109I GCAGC 5 cut(s) 89, 106, 438, 450, 986
LweI GCATC 3 cut(s) 335, 870, 902
MaeI CTAG 3 cut(s) 320, 387, 501
MaeII ACGT 1 cut(s) 492
MaeIII GTNAC 4 cut(s) 64, 215, 762, 788
MalI GATC 4 cut(s) 84, 311, 393, 711
MbiI CCGCTC 1 cut(s) 718
MboI GATC 4 cut(s) 82, 309, 391, 709
MboII GAAGA 2 cut(s) 958, 996
MflI RGATCY 1 cut(s) 309
MhlI GDGCHC 5 cut(s) 472, 492, 652, 680, 698
MluCI AATT 2 cut(s) 612, 902
MluI ACGCGT 1 cut(s) 240
MlyI GAGTC 3 cut(s) 122, 320, 659
MseI TTAA 3 cut(s) 315, 845, 1033
MslI CAYNNNNRTG 2 cut(s) 189, 399
MspA1I CMGCKG 1 cut(s) 80
MspCI CTTAAG 1 cut(s) 314
MspI CCGG 6 cut(s) 59, 71, 276, 750, 884, 899
MspR9I CCNGG 1 cut(s) 899
MvnI CGCG 1 cut(s) 242
MwoI GCNNNNNNNGC 7 cut(s) 195, 302, 460, 538, 547, 556, 656
NciI CCSGG 1 cut(s) 899
NcoI CCATGG 1 cut(s) 349
NdeII GATC 4 cut(s) 82, 309, 391, 709
NlaIV GGNNCC 3 cut(s) 26, 274, 649
NmuCI GTSAC 3 cut(s) 215, 762, 788
NspI RCATGY 1 cut(s) 545
PaeI GCATGC 1 cut(s) 545
PagI TCATGA 1 cut(s) 375
PaqCI CACCTGC 1 cut(s) 635
PciSI GCTCTTC 1 cut(s) 1009
PflMI CCANNNNNTGG 1 cut(s) 640
PinAI ACCGGT 1 cut(s) 275
PkrI GCNGC 7 cut(s) 79, 96, 197, 295, 453, 465, 1001
PleI GAGTC 3 cut(s) 122, 320, 659
PpsI GAGTC 3 cut(s) 122, 320, 659
Ppu21I YACGTR 1 cut(s) 493
PsiI TTATAA 1 cut(s) 207
PspN4I GGNNCC 3 cut(s) 26, 274, 649
PspPI GGNCC 1 cut(s) 295
PsuI RGATCY 1 cut(s) 309
PvuII CAGCTG 1 cut(s) 80
RsaI GTAC 1 cut(s) 385
RsaNI GTAC 1 cut(s) 384
RseI CAYNNNNRTG 2 cut(s) 189, 399
SapI GCTCTTC 1 cut(s) 1009
SaqAI TTAA 3 cut(s) 315, 845, 1033
SatI GCNGC 7 cut(s) 78, 95, 196, 294, 452, 464, 1000
Sau3AI GATC 4 cut(s) 82, 309, 391, 709
Sau96I GGNCC 1 cut(s) 295
ScaI AGTACT 1 cut(s) 385
SchI GAGTC 3 cut(s) 122, 320, 659
ScrFI CCNGG 1 cut(s) 899
SduI GDGCHC 5 cut(s) 472, 492, 652, 680, 698
SfaNI GCATC 3 cut(s) 335, 870, 902
SmiMI CAYNNNNRTG 2 cut(s) 189, 399
SmlI CTYRAG 2 cut(s) 161, 314
SmoI CTYRAG 2 cut(s) 161, 314
SpeI ACTAGT 1 cut(s) 386
SphI GCATGC 1 cut(s) 545
Sse9I AATT 2 cut(s) 612, 902
SsiI CCGC 6 cut(s) 195, 293, 305, 718, 726, 737
SspMI CTAG 3 cut(s) 320, 387, 501
StyD4I CCNGG 1 cut(s) 897
StyI CCWWGG 1 cut(s) 349
TaaI ACNGT 2 cut(s) 202, 958
TaiI ACGT 1 cut(s) 495
TaqI TCGA 2 cut(s) 261, 456
TasI AATT 2 cut(s) 612, 902
TatI WGTACW 1 cut(s) 383
TauI GCSGC 2 cut(s) 198, 296
Tru1I TTAA 3 cut(s) 315, 845, 1033
Tru9I TTAA 3 cut(s) 315, 845, 1033
TscAI CASTG 5 cut(s) 12, 57, 205, 813, 1015
TseFI GTSAC 3 cut(s) 215, 762, 788
TseI GCWGC 5 cut(s) 77, 94, 451, 463, 999
Tsp45I GTSAC 3 cut(s) 215, 762, 788
TspDTI ATGAA 3 cut(s) 236, 364, 904
TspGWI ACGGA 1 cut(s) 245
TspRI CASTG 5 cut(s) 12, 57, 205, 813, 1015
Van91I CCANNNNNTGG 1 cut(s) 640
Vha464I CTTAAG 1 cut(s) 314
XapI RAATTY 1 cut(s) 902
XceI RCATGY 1 cut(s) 545
XcmI CCANNNNNNNNNTGG 1 cut(s) 1015
XspI CTAG 3 cut(s) 320, 387, 501
ZrmI AGTACT 1 cut(s) 385
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.