FvH4_5g24110

Formin-like protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Forward (+)
15397882 .. 15408474
10593 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g24110.t1

Sequence Viewer

Length: 3612 bp
ATGTCGCTTCTAAGTAGATTCTTTTACAAAAGGCCACCAGATGGATTGCTTGAATTTGTTGAGAGAGTATACGTGTTTGATTCGTGTTTTTCAACCGAGGTCTTGCCTGAGGGAATGTACCAAATCTACTTGCATGAAATCGTTACTGAGTTACATGAAGAATTCCCTGAGTCATCCTTCCTTGCGTTCAATTTCCGTGAGGGTGAGAAGCGTAGTCAGTTTGCTGAGATACTATGCGAATATGATGTTACGGTTATGGATTATCCGCGACAGTATGAGGGTTGTCCACTTCTGCCGTTATCTCTCATTCAACATTTTCTTCGTGTATGTGAGAGTTGGCTGTTGCTTGGCAAGCAACAGAATGTTATTCTTCTCCACTGTGAGAGAGGGGGTTGGCCGCTGTTGGCATTCCTTTTAGCTAGCTTTCTGATATTTAGAAAATTGCATAGTGGTGAACGCAAGACTCTTGACATTGTACATCGTGAAGCTCCTAAAGGTTTCTTGCAGCTATTGTCACCTTTAAATCCACTCCCATCTCAGCTTCGTTACCTACAGTACGTTGCGAGAAGAAATATAGCTCCAGAGTGGCCGCCTCCTGAGCGAGCACTTTCCTTAGATTGTGTCATTCTTCGAGCCATTCCAAACTTTGATTCCCAAAATGGCTGTACTCCAATTATTCGTATTTTTGGTAGGAATTACCTTAGCAAGGGTGGGCTTTCGACCCATATGCTTTTCTCCATGCCCAGGAAGAAGACACTTCGGACCTACCGTCAGGCAGATTGTGATGTTATCAAAATTGACATTCAGTGTTTAGTGCAAGGAGATGTTGTTTTGGAGTGTGTCCACTTGGATTCAGATCCAGAGAGGGAAGTTATGATGTTCCGTGTTATGTTCAACACTGCATTTATTCGTTCCAATATACTAATGCTGAATTCTGAAAACTTGGACATTCTATGGGATTCAAAGGAGTGCTATCCCAAAGGCTTCCGAGCTGAGGTATTGTTTGGGGAAGTTGAGAGCATATCTCCTCCCAGAGCTCCGACCACAATTTTAAATGGTGAGGAGAAAGGTGGATTGCCTATTGAAGCTTTTTCTAGGGTTCAAGAACTTTTCAATGGTGGTGAGTGGGTTGATAGAAATGATGATGCAGCTTTGTGGTTGCTCAAGCAGCTTTCTGTCTTGAGTGACACGAAAGAAATGTCAAGGTTGCAAAACAGAGTGAGTTTATTCACATCACCTGCTGACTCTGAAGAAGAAAATAATGCATCTAGCACTGCTGACAGTTCAGATGAAGCTTGTGATACTGTTTCCAAGGCTTCAGCAGATTCAACAAAAGGAATGATGATCGATACCTTTGACTCAGTCCCCTTATCATTTGAAAATGACAGTCCACCCAATGTGAACCTAGCTTCAGAGTTAGCTGGACCTGTACAGCAATCTCTTCGTCAACAATCATTAGATAAAAGTAAAGAGTCATCACCGTGTTCATCCCCTCAAACAACTCCACCCTTGAAATCAGCATCATTACATCTGGCTTTTCAGCCTCCGCAACTACCACCTCCAGATACCGATGCTATTAAAGGGCCTACACCATCCCCACCGCCTCCACCCAGTGACAGTTCCAATAGAAGTGTACTGGACCCCCTACCTTCCAGTACTAGTAGAGTTCCGCTGCCGCCACCACCGCCGCCACCGCTGACGTCTCTACCTCCCTCTCCTAATGCCTCTAGAAAAGTCCCACCACCACCTCCGCCACCACCACCTCTTTCTTCTAAATCTAGTCAACATTCTTTGCCACCTCCCCCACCGCCTCCTCCATTTTTAGGAAGTACAACCAACAAGCTACTACAGACAGTGGCACCACCACCACCACCACCGCCTCCTCCTCCTCTTCCATCCATTTCTGGTACTGGTTGTGCAGTACTGCCACCTCCTCCACCTCCTCCACCTCCTCCTTTTCCATCCGTTTCTGGTTTTGGTTGTGCGGCACCACCACCCCCACCACCCCCTCCCCTCCCAAACATTTCTGGTCCTGGTTGTGCAGCACCACCCCCTCCTCCACCCCCTCCCCCATTGAGTTGTAGGCCACCACCCCCTCCTCCACCACCAGCACCAAAACTCCCTAATGCTCCACATCTGCCGTCAAGTCGTCCTGCACCACCAGCTCCACCCCCACCACCTGGAGGGAAGGGCCCTAGTGCACCACCACCACCCCCACCACTTGGAGGGAAGGGCCCTAGTGCACTACCGCCACCCCCACCACCTGGAGGAAAGGGCCCTAGTGCACCACCCCCACCCCCACCATCTGCTGGAAGGGGTAAAGCATCTTCTGGACCAACAAGTCTTGAAAGAGATCGTGTTGCTGCTAATGCCCCAAAGAAAACTTCCTTGAAGCCCCTACACTGGGTGAAGGTTACTCGTGCAATGCAAGGGAGCTTATGGGCTGATTCTCAAAAACAGGAAAATCTGTCGAGTGCTCCAGAAATAGATATATCAGAGCTTGAAAGTCTGTTCTCAGCAGCCTCTGCTTCAGATAGGAATGGCAGTAAAGCTGGAGGTAGACGTGGTCCAACCATGACCAAACCAGAGAAAGTGCAATTGGTTGATTTGCGTAGAGCATATAACTGTGAAATTATGCTTTCAAAAATCAAGATCCCTCTGCCGGATATGATTAATGCAGTTATGGCACTGGATTCTTCTGTTCTTGACATTGATCAGGTTGAGAATCTCATTAGATTTTGTCCTACCAAAGAAGAAATGGAAACTTTGAAGAACTATACGGGTGAGAAGGAAATGCTGGGAAAGTGTGAACAGTTTTTCTTAGAGCTGATGAAGGTTCCACGAGTAGAACCCAAGTTGCGAGTATTTGCTTTCAAAATTACCTTTTCTAGTCAGGTGAAAGATTTAAGATCAAATTTGATTACCATCAACAGTGCTACTAAAGAGGTTAAAGAATCTGCGAAGTTGCGACAGGTAATGCAGACAATTCTTACTTTGGGAAATGCCTTAAATCAAGGCACTGCTCGAGGGTCAGCGATAGGATTTAAATTGGACAGCCTTCTTAAATTGTCTGATACCCGTGCAAGAAACAACAAAATGACTTTAATGCACTATTTGTGTAAGCTCATTGCTGAGAAAATGCCTGAGTTGCTGGATTTCGATAAGGATCTTATTCATTTGGAAGCTGCCTCTAAGATTCCATTGAAAGCTTTAGCTGAAGAAATGCAAGCTGTGAGTAAAGGTCTTGAAAAGGTTGAGCAGGAACTTGCTGCTGCCGAAAATGACGGTGTAATCTCTTCTGGTTTTCGAAAGGTGCTGAAGAATTTTCTTGATACTGCTGAAGCTGAAGTTAGGTCACTAATCTCCTTGTACTCTGAAGTGGGAAGAAACGCAGATTCTTTGTCTCAATACTTTGGGGAGGATCCATCTCGGTGTCCTTTCGAACAAGTGACACAGGTGTTGTTCATCTTTGTCAAGATGTTCAGCAAGTCGCGAGAGGAAAATGAAAGACTGGCTGATATTGAAAAGAAGAAGCTTGAAAAGGAAGCCATGAAAGAGCGAACTGTCGCAAATTCATCTGCAAAGAAAGATTCTGTGGATAGAGCAACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1204

Amino Acids

131.54

Weight (kDa)

6.75

Isoelectric Point (pI)

63.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PTEN_C2 PF10409 198 - 337 2.2e-37 C2 domain of PTEN tumour-suppressor protein
FH2 PF02181 791 - 1162 1.6e-120 Formin Homology 2 Domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013558)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G31810 AT1G31810
fragaria_vesca FvH4_5g24110 FvH4_5g24110
malus_domestica MD06G1017200.v1.1
prunus_persica Prupe.5G019200_v2.0.a1
pyrus_communis pycom06g01390
rosa_chinensis RchiOBHm_Chr7g0213641
rosa_laevigata RLG00000002794
rosa_multiflora Rmu_sc0008101.1_g000010
rosa_roxburghii Rroxscaffold_3G00245720
rosa_rugosa Rorug07G0143800 Rorug07G0143900
rosa_samantha Rh7AG276700 Rh7BG270900 Rh7CG295700 Rh7DG283000
rosa_wichuraiana Rw7G023880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1246
AasI GACNNNNNNGTC 1 cut(s) 2340
AatII GACGTC 1 cut(s) 1703
Acc36I ACCTGC 1 cut(s) 1246
AccB1I GGYRCC 2 cut(s) 1858, 1987
AccB7I CCANNNNNTGG 5 cut(s) 41, 2180, 2222, 2264, 2309
AccI GTMKAC 2 cut(s) 69, 2560
AccII CGCG 2 cut(s) 268, 3493
AclWI GGATC 5 cut(s) 851, 2647, 3174, 3416, 3429
AcoI YGGCCR 2 cut(s) 395, 587
AcsI RAATTY 6 cut(s) 53, 161, 931, 2914, 3322, 3571
AcuI CTGAAG 9 cut(s) 1269, 1302, 1395, 2514, 3237, 3338, 3360, 3366, 3396
AcyI GRCGYC 1 cut(s) 1700
AdeI CACNNNGTG 2 cut(s) 1613, 2407
AflIII ACRYGT 1 cut(s) 72
AhdI GACNNNNNGTC 1 cut(s) 768
AhlI ACTAGT 1 cut(s) 1658
AjiI CACGTC 1 cut(s) 2564
AjnI CCWGG 4 cut(s) 743, 2032, 2179, 2263
AjuI GAANNNNNNNTTGG 6 cut(s) 634, 666, 2368, 2400, 2582, 2614
Alw21I GWGCWC 6 cut(s) 607, 1039, 2203, 2245, 2287, 2479
Alw26I GTCTC 2 cut(s) 1707, 3408
Alw44I GTGCAC 3 cut(s) 2199, 2241, 2283
AlwI GGATC 5 cut(s) 851, 2647, 3174, 3416, 3429
AlwNI CAGNNNCTG 1 cut(s) 2525
Ama87I CYCGRG 1 cut(s) 3024
AoxI GGCC 8 cut(s) 32, 395, 587, 1583, 2084, 2191, 2233, 2275
ApaI GGGCCC 3 cut(s) 2195, 2237, 2279
ApaLI GTGCAC 3 cut(s) 2199, 2241, 2283
ApoI RAATTY 6 cut(s) 53, 161, 931, 2914, 3322, 3571
ArsI GACNNNNNNTTYG 2 cut(s) 1184, 1216
AseI ATTAAT 1 cut(s) 2673
AsuII TTCGAA 2 cut(s) 3307, 3441
AsuNHI GCTAGC 1 cut(s) 419
AvaI CYCGRG 1 cut(s) 3024
AvaII GGWCC 6 cut(s) 762, 1424, 1639, 2030, 2333, 2567
AxyI CCTNAGG 1 cut(s) 108
BaeGI GKGCMC 6 cut(s) 2195, 2203, 2237, 2245, 2279, 2287
BamHI GGATCC 1 cut(s) 3421
BanI GGYRCC 2 cut(s) 1858, 1987
BanII GRGCYC 4 cut(s) 1039, 2195, 2237, 2279
BarI GAAGNNNNNNTAC 2 cut(s) 2311, 2343
BauI CACGAG 2 cut(s) 2418, 2841
BbsI GAAGAC 1 cut(s) 758
Bbv12I GWGCWC 6 cut(s) 607, 1039, 2203, 2245, 2287, 2479
BbvCI CCTCAGC 1 cut(s) 993
BccI CCATC 8 cut(s) 35, 541, 1600, 1903, 1969, 2311, 2933, 3433
BceAI ACGGC 2 cut(s) 280, 2125
BcgI CGANNNNNNTGC 4 cut(s) 709, 743, 1424, 1458
BciT130I CCWGG 4 cut(s) 745, 2034, 2181, 2265
BclI TGATCA 1 cut(s) 2713
BcoDI GTCTC 2 cut(s) 1707, 3408
BcuI ACTAGT 1 cut(s) 1658
BfmI CTRYAG 2 cut(s) 551, 1847
BfuAI ACCTGC 1 cut(s) 1246
BmcAI AGTACT 2 cut(s) 1657, 1923
Bme1390I CCNGG 4 cut(s) 745, 2034, 2181, 2265
Bme18I GGWCC 6 cut(s) 762, 1424, 1639, 2030, 2333, 2567
BmeRI GACNNNNNGTC 1 cut(s) 768
BmeT110I CYCGRG 1 cut(s) 3024
BmgBI CACGTC 1 cut(s) 2564
BmiI GGNNCC 8 cut(s) 1641, 1860, 1989, 2193, 2235, 2277, 2838, 3423
BmrFI CCNGG 4 cut(s) 745, 2034, 2181, 2265
BmrI ACTGGG 2 cut(s) 1605, 2413
BmsI GCATC 5 cut(s) 1135, 1274, 1529, 1561, 2333
BmtI GCTAGC 1 cut(s) 423
BmuI ACTGGG 2 cut(s) 1605, 2413
BpiI GAAGAC 1 cut(s) 758
BplI GAGNNNNNCTC 2 cut(s) 1009, 1041
BpmI CTGGAG 6 cut(s) 564, 1545, 2202, 2286, 2463, 2574
Bpu10I CCTNAGC 3 cut(s) 597, 701, 993
Bpu14I TTCGAA 2 cut(s) 3307, 3441
BpuEI CTTGAG 2 cut(s) 1148, 1201
Bsa29I ATCGAT 1 cut(s) 1347
BsaAI YACGTR 1 cut(s) 73
BsaBI GATNNNNATC 3 cut(s) 855, 2924, 3165
BsaHI GRCGYC 1 cut(s) 1700
BsaJI CCNNGG 3 cut(s) 96, 743, 1311
BsaXI ACNNNNNCTCC 4 cut(s) 813, 843, 2103, 2133
Bse1I ACTGG 7 cut(s) 1611, 1641, 1653, 1915, 2408, 2694, 3516
Bse21I CCTNAGG 1 cut(s) 108
Bse3DI GCAATG 2 cut(s) 2430, 3126
Bse8I GATNNNNATC 3 cut(s) 855, 2924, 3165
BseBI CCWGG 4 cut(s) 745, 2034, 2181, 2265
BseCI ATCGAT 1 cut(s) 1347
BseDI CCNNGG 3 cut(s) 96, 743, 1311
BseGI GGATG 5 cut(s) 173, 1487, 1592, 1895, 1961
BseJI GATNNNNATC 3 cut(s) 855, 2924, 3165
BseMI GCAATG 2 cut(s) 2430, 3126
BseNI ACTGG 7 cut(s) 1611, 1641, 1653, 1915, 2408, 2694, 3516
BseSI GKGCMC 6 cut(s) 2195, 2203, 2237, 2245, 2279, 2287
BseYI CCCAGC 1 cut(s) 2797
BsgI GTGCAG 3 cut(s) 1938, 2061, 2139
Bsh1236I CGCG 2 cut(s) 268, 3493
BshFI GGCC 8 cut(s) 34, 397, 589, 1585, 2086, 2193, 2235, 2277
BshNI GGYRCC 2 cut(s) 1858, 1987
BshVI ATCGAT 1 cut(s) 1347
BsiHKAI GWGCWC 6 cut(s) 607, 1039, 2203, 2245, 2287, 2479
BsiHKCI CYCGRG 1 cut(s) 3024
BsiSI CCGG 1 cut(s) 2663
BslFI GGGAC 2 cut(s) 1349, 1721
BsmAI GTCTC 2 cut(s) 1707, 3408
BsmBI CGTCTC 1 cut(s) 1707
BsmFI GGGAC 2 cut(s) 1349, 1721
BsmI GAATGC 1 cut(s) 407
BsnI GGCC 8 cut(s) 34, 397, 589, 1585, 2086, 2193, 2235, 2277
BsoBI CYCGRG 1 cut(s) 3024
Bsp119I TTCGAA 2 cut(s) 3307, 3441
Bsp120I GGGCCC 3 cut(s) 2191, 2233, 2275
Bsp1286I GDGCHC 9 cut(s) 607, 1039, 2195, 2203, 2237, 2245, 2279, 2287, 2479
Bsp1407I TGTACA 2 cut(s) 475, 1429
Bsp143I GATC 8 cut(s) 856, 1344, 2353, 2652, 2713, 2909, 3166, 3421
Bsp68I TCGCGA 1 cut(s) 3493
BspANI GGCC 8 cut(s) 34, 397, 589, 1585, 2086, 2193, 2235, 2277
BspDI ATCGAT 1 cut(s) 1347
BspFNI CGCG 2 cut(s) 268, 3493
BspLI GGNNCC 8 cut(s) 1641, 1860, 1989, 2193, 2235, 2277, 2838, 3423
BspMI ACCTGC 1 cut(s) 1246
BspOI GCTAGC 1 cut(s) 423
BspPI GGATC 5 cut(s) 851, 2647, 3174, 3416, 3429
BspT104I TTCGAA 2 cut(s) 3307, 3441
BspT107I GGYRCC 2 cut(s) 1858, 1987
BsrDI GCAATG 2 cut(s) 2430, 3126
BsrGI TGTACA 2 cut(s) 475, 1429
BsrI ACTGG 7 cut(s) 1611, 1641, 1653, 1915, 2408, 2694, 3516
BssECI CCNNGG 3 cut(s) 96, 743, 1311
BssMI GATC 8 cut(s) 856, 1344, 2353, 2652, 2713, 2909, 3166, 3421
BssNAI GTATAC 1 cut(s) 70
BssNI GRCGYC 1 cut(s) 1700
BssSI CACGAG 2 cut(s) 2418, 2841
BssT1I CCWWGG 1 cut(s) 1311
Bst1107I GTATAC 1 cut(s) 70
Bst2BI CACGAG 2 cut(s) 2418, 2841
Bst2UI CCWGG 4 cut(s) 745, 2034, 2181, 2265
Bst6I CTCTTC 3 cut(s) 1446, 1896, 3301
BstACI GRCGYC 1 cut(s) 1700
BstAPI GCANNNNNTGC 1 cut(s) 2525
BstAUI TGTACA 2 cut(s) 475, 1429
BstBAI YACGTR 1 cut(s) 73
BstBI TTCGAA 2 cut(s) 3307, 3441
BstC8I GCNNGC 4 cut(s) 353, 421, 603, 3228
BstENI CCTNNNNNAGG 1 cut(s) 704
BstF5I GGATG 5 cut(s) 173, 1487, 1592, 1895, 1961
BstFNI CGCG 2 cut(s) 268, 3493
BstKTI GATC 8 cut(s) 859, 1347, 2356, 2655, 2716, 2912, 3169, 3424
BstMAI GTCTC 2 cut(s) 1707, 3408
BstMBI GATC 8 cut(s) 856, 1344, 2353, 2652, 2713, 2909, 3166, 3421
BstNI CCWGG 4 cut(s) 745, 2034, 2181, 2265
BstSCI CCNGG 4 cut(s) 743, 2032, 2179, 2263
BstSFI CTRYAG 2 cut(s) 551, 1847
BstSLI GKGCMC 6 cut(s) 2195, 2203, 2237, 2245, 2279, 2287
BstUI CGCG 2 cut(s) 268, 3493
BstV2I GAAGAC 1 cut(s) 758
BstX2I RGATCY 4 cut(s) 856, 2652, 3166, 3421
BstYI RGATCY 4 cut(s) 856, 2652, 3166, 3421
BstZ17I GTATAC 1 cut(s) 70
Bsu15I ATCGAT 1 cut(s) 1347
Bsu36I CCTNAGG 1 cut(s) 108
BsuRI GGCC 8 cut(s) 34, 397, 589, 1585, 2086, 2193, 2235, 2277
BsuTUI ATCGAT 1 cut(s) 1347
BtrI CACGTC 1 cut(s) 2564
BtsCI GGATG 5 cut(s) 173, 1487, 1592, 1895, 1961
BtsI GCAGTG 3 cut(s) 897, 1272, 3018
BtuMI TCGCGA 1 cut(s) 3493
BveI ACCTGC 1 cut(s) 1246
Cac8I GCNNGC 4 cut(s) 353, 421, 603, 3228
CaiI CAGNNNCTG 1 cut(s) 2525
ClaI ATCGAT 1 cut(s) 1347
CviAII CATG 6 cut(s) 134, 155, 739, 2575, 3550, 3609
DpnI GATC 8 cut(s) 858, 1346, 2355, 2654, 2715, 2911, 3168, 3423
DpnII GATC 8 cut(s) 856, 1344, 2353, 2652, 2713, 2909, 3166, 3421
DraI TTTAAA 3 cut(s) 522, 1053, 3046
DraIII CACNNNGTG 2 cut(s) 1613, 2407
DrdI GACNNNNNNGTC 1 cut(s) 2340
DriI GACNNNNNGTC 1 cut(s) 768
DseDI GACNNNNNNGTC 1 cut(s) 2340
EaeI YGGCCR 2 cut(s) 395, 587
Eam1104I CTCTTC 3 cut(s) 1446, 1896, 3301
Eam1105I GACNNNNNGTC 1 cut(s) 768
EarI CTCTTC 3 cut(s) 1446, 1896, 3301
EciI GGCGGA 1 cut(s) 1740
Ecl136II GAGCTC 1 cut(s) 1037
Eco130I CCWWGG 1 cut(s) 1311
Eco24I GRGCYC 4 cut(s) 1039, 2195, 2237, 2279
Eco47I GGWCC 6 cut(s) 762, 1424, 1639, 2030, 2333, 2567
Eco53kI GAGCTC 1 cut(s) 1037
Eco57I CTGAAG 9 cut(s) 1269, 1302, 1395, 2514, 3237, 3338, 3360, 3366, 3396
Eco81I CCTNAGG 1 cut(s) 108
Eco88I CYCGRG 1 cut(s) 3024
EcoICRI GAGCTC 1 cut(s) 1037
EcoNI CCTNNNNNAGG 1 cut(s) 704
EcoO109I RGGNCCY 7 cut(s) 1583, 2191, 2192, 2233, 2234, 2275, 2276
EcoRI GAATTC 2 cut(s) 161, 931
EcoRII CCWGG 4 cut(s) 743, 2032, 2179, 2263
EcoT14I CCWWGG 1 cut(s) 1311
EcoT22I ATGCAT 1 cut(s) 1267
EcoT38I GRGCYC 4 cut(s) 1039, 2195, 2237, 2279
ErhI CCWWGG 1 cut(s) 1311
Esp3I CGTCTC 1 cut(s) 1707
FaeI CATG 6 cut(s) 137, 158, 742, 2578, 3553, 3612
FaqI GGGAC 2 cut(s) 1349, 1721
FatI CATG 6 cut(s) 133, 154, 738, 2574, 3549, 3608
FauNDI CATATG 1 cut(s) 726
FbaI TGATCA 1 cut(s) 2713
FblI GTMKAC 2 cut(s) 69, 2560
FokI GGATG 5 cut(s) 160, 1474, 1579, 1882, 1948
FriOI GRGCYC 4 cut(s) 1039, 2195, 2237, 2279
GsaI CCCAGC 1 cut(s) 2801
GsuI CTGGAG 6 cut(s) 564, 1545, 2202, 2286, 2463, 2574
HaeIII GGCC 8 cut(s) 34, 397, 589, 1585, 2086, 2193, 2235, 2277
HapII CCGG 1 cut(s) 2663
Hin1I GRCGYC 1 cut(s) 1700
Hin1II CATG 6 cut(s) 137, 158, 742, 2578, 3553, 3612
HincII GTYRAC 2 cut(s) 1448, 1784
HindII GTYRAC 2 cut(s) 1448, 1784
HindIII AAGCTT 4 cut(s) 1086, 1293, 3207, 3533
HpaII CCGG 1 cut(s) 2663
HpyAV CCTTC 9 cut(s) 187, 1659, 2182, 2224, 2307, 2404, 2782, 2827, 3068
HpyCH4IV ACGT 4 cut(s) 72, 558, 1700, 2563
HpySE526I ACGT 4 cut(s) 72, 558, 1700, 2563
Hsp92I GRCGYC 1 cut(s) 1700
Hsp92II CATG 6 cut(s) 137, 158, 742, 2578, 3553, 3612
Ksp22I TGATCA 1 cut(s) 2713
Kzo9I GATC 8 cut(s) 856, 1344, 2353, 2652, 2713, 2909, 3166, 3421
LmnI GCTCC 7 cut(s) 493, 583, 1042, 2134, 2170, 2433, 2482
LweI GCATC 5 cut(s) 1135, 1274, 1529, 1561, 2333
MaeII ACGT 4 cut(s) 72, 558, 1700, 2563
MalI GATC 8 cut(s) 858, 1346, 2355, 2654, 2715, 2911, 3168, 3423
MboI GATC 8 cut(s) 856, 1344, 2353, 2652, 2713, 2909, 3166, 3421
MfeI CAATTG 1 cut(s) 2597
MflI RGATCY 4 cut(s) 856, 2652, 3166, 3421
MhlI GDGCHC 9 cut(s) 607, 1039, 2195, 2203, 2237, 2245, 2279, 2287, 2479
MlyI GAGTC 5 cut(s) 179, 457, 1238, 1352, 1481
MmeI TCCRAC 2 cut(s) 1064, 2594
Mph1103I ATGCAT 1 cut(s) 1267
MslI CAYNNNNRTG 3 cut(s) 450, 1480, 3430
MspA1I CMGCKG 3 cut(s) 400, 1672, 1696
MspI CCGG 1 cut(s) 2663
MspR9I CCNGG 4 cut(s) 745, 2034, 2181, 2265
MunI CAATTG 1 cut(s) 2597
Mva1269I GAATGC 1 cut(s) 407
MvaI CCWGG 4 cut(s) 745, 2034, 2181, 2265
MvnI CGCG 2 cut(s) 268, 3493
NdeI CATATG 1 cut(s) 726
NdeII GATC 8 cut(s) 856, 1344, 2353, 2652, 2713, 2909, 3166, 3421
NheI GCTAGC 1 cut(s) 419
NlaIII CATG 6 cut(s) 137, 158, 742, 2578, 3553, 3612
NlaIV GGNNCC 8 cut(s) 1641, 1860, 1989, 2193, 2235, 2277, 2838, 3423
NmuCI GTSAC 5 cut(s) 513, 1184, 1613, 3354, 3448
NruI TCGCGA 1 cut(s) 3493
NsiI ATGCAT 1 cut(s) 1267
NspV TTCGAA 2 cut(s) 3307, 3441
PaeR7I CTCGAG 1 cut(s) 3024
PaqCI CACCTGC 1 cut(s) 1246
PcsI WCGNNNNNNNCGW 1 cut(s) 766
PctI GAATGC 1 cut(s) 407
PflFI GACNNNGTC 2 cut(s) 1361, 2565
PflMI CCANNNNNTGG 5 cut(s) 41, 2180, 2222, 2264, 2309
PleI GAGTC 5 cut(s) 178, 457, 1238, 1352, 1480
PpsI GAGTC 5 cut(s) 178, 457, 1238, 1352, 1480
Ppu21I YACGTR 1 cut(s) 73
PshBI ATTAAT 1 cut(s) 2673
Psp124BI GAGCTC 1 cut(s) 1039
Psp6I CCWGG 4 cut(s) 743, 2032, 2179, 2263
PspFI CCCAGC 1 cut(s) 2797
PspGI CCWGG 4 cut(s) 743, 2032, 2179, 2263
PspN4I GGNNCC 8 cut(s) 1641, 1860, 1989, 2193, 2235, 2277, 2838, 3423
PspOMI GGGCCC 3 cut(s) 2191, 2233, 2275
PspXI VCTCGAGB 1 cut(s) 3024
PstNI CAGNNNCTG 1 cut(s) 2525
PsuI RGATCY 4 cut(s) 856, 2652, 3166, 3421
PsyI GACNNNGTC 2 cut(s) 1361, 2565
RruI TCGCGA 1 cut(s) 3493
RseI CAYNNNNRTG 3 cut(s) 450, 1480, 3430
SacI GAGCTC 1 cut(s) 1039
Sau3AI GATC 8 cut(s) 856, 1344, 2353, 2652, 2713, 2909, 3166, 3421
ScaI AGTACT 2 cut(s) 1657, 1923
SchI GAGTC 5 cut(s) 179, 457, 1238, 1352, 1481
ScrFI CCNGG 4 cut(s) 745, 2034, 2181, 2265
SduI GDGCHC 9 cut(s) 607, 1039, 2195, 2203, 2237, 2245, 2279, 2287, 2479
SfaNI GCATC 5 cut(s) 1135, 1274, 1529, 1561, 2333
SfcI CTRYAG 2 cut(s) 551, 1847
Sfr274I CTCGAG 1 cut(s) 3024
SfuI TTCGAA 2 cut(s) 3307, 3441
SinI GGWCC 6 cut(s) 762, 1424, 1639, 2030, 2333, 2567
SlaI CTCGAG 1 cut(s) 3024
SmiI ATTTAAAT 1 cut(s) 3046
SmiMI CAYNNNNRTG 3 cut(s) 450, 1480, 3430
SmlI CTYRAG 3 cut(s) 1163, 1180, 3024
SmoI CTYRAG 3 cut(s) 1163, 1180, 3024
SpeI ACTAGT 1 cut(s) 1658
SstI GAGCTC 1 cut(s) 1039
StyD4I CCNGG 4 cut(s) 743, 2032, 2179, 2263
StyI CCWWGG 1 cut(s) 1311
SwaI ATTTAAAT 1 cut(s) 3046
TaiI ACGT 4 cut(s) 75, 561, 1703, 2566
TaqI TCGA 8 cut(s) 631, 719, 1347, 2471, 3025, 3159, 3307, 3441
TatI WGTACW 8 cut(s) 475, 665, 1429, 1633, 1655, 1829, 1921, 3369
TauI GCSGC 5 cut(s) 400, 592, 1678, 1690, 1988
TseFI GTSAC 5 cut(s) 513, 1184, 1613, 3354, 3448
Tsp45I GTSAC 5 cut(s) 513, 1184, 1613, 3354, 3448
TspGWI ACGGA 3 cut(s) 185, 872, 1954
Tth111I GACNNNGTC 2 cut(s) 1361, 2565
Van91I CCANNNNNTGG 5 cut(s) 41, 2180, 2222, 2264, 2309
VneI GTGCAC 3 cut(s) 2199, 2241, 2283
VpaK11BI GGWCC 6 cut(s) 762, 1424, 1639, 2030, 2333, 2567
VspI ATTAAT 1 cut(s) 2673
XagI CCTNNNNNAGG 1 cut(s) 704
XapI RAATTY 6 cut(s) 53, 161, 931, 2914, 3322, 3571
XbaI TCTAGA 1 cut(s) 1727
XcmI CCANNNNNNNNNTGG 1 cut(s) 2755
XhoI CTCGAG 1 cut(s) 3024
XmiI GTMKAC 2 cut(s) 69, 2560
ZraI GACGTC 1 cut(s) 1701
ZrmI AGTACT 2 cut(s) 1657, 1923
Zsp2I ATGCAT 1 cut(s) 1267
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.