RchiOBHm_Chr7g0213641

Formin-like protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
30703497 .. 30714127
10631 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ19122

Sequence Viewer

Length: 3522 bp
ATGTCGCTTCTAAGTAGATTTTTTTACAAAAGGCCCCCAGATGGATTGCTTGAATTTGTAGAGAGAGTATATGTGTTTGATTCTTGTTTTTCCACCGAGGTATTGCCTGAGGAAATGTACCAAATCTACTTGCATGAAATCGTTACTGAGTTACATGAAGAATTCCCAGAATCATCGTTCCTTGCATTCAATTTTCGTGAGGGTGAGAAACGTAGTCAGTTTGCTGAGATACTATGCGAATATGATGTTACAGTTATGGATTATCCACGACAGTATGAGGGTTGTCCACTCCTTCCATTATCTCTCATTCAACATTTTCTTCGTGTTTGTGAGAGTTGGCTGTTGCTTGGCAAGCAACAGAATGTTATTCTTCTCCACTGTGAGAGGGGGGGTTGGCCACTGTTGGCATTCCTTTTAGCTAGCTTTTTGATATTTAGAAAATTGCATAGTGGTGAACGCAAGACTCTGGACATTGTACATCGTGAAGCTCCTAAAGGTTTCTTGCAGCTGTTGTCACCTTTAAATCCGCTCCCATCTCAGCTTCGTTACCTTCAATACGTTGCGAGAAGAAATATAGCTCCAGAGTGGCCACCTCCTGAGCGAGCACTTTCTTTAGATTGTGTCATTCTTCGAGCTATTCCAAACTTTGATTCCCAAAATGGCTGCACTCCAATTATTCGTATTTTTGGTAGGAATTACCTTAGCAAGGGTGGGCTTTCGACCCAAATGCTTTTTTCCATGCCTAGGAAGAAGACACTTCGAAACTACCGTCAGGCAGATTGTGATGTCATCAAAATTGACATTCAGTGTTTAGTGCAAGGAGATGTTGTGTTGGAGTGTGTCCACTTGGATTCCGATCCAGAAAGGGAAGTCATGATGTTCCGTGTTATGTTCAACACTGCATTTATTCGTTCCAATATACTGATGCTGAATTCTGAAAACTTAGACATTCTATGGGATTCAAAGGAGTGCTATCCCAAAGGCTTCCGAGCTGAGGTATTGTTTGGGGAAGTTGAGAGCATCTCTCCTCCCAGAGCTCCAACCACAATTTTAAATGGTGAGGAGAAAGGTGGATTGCCTATTGAAGCTTTTTCTAGGGTTCAAGAACTTTTCAATGGTGGTGAGTGGGTTGATAGAAATGATGATGCAGCGTTATGGTTGCTTAAGCAGCTTTCTGTCTTAAGTGACGCGAAAGAAATGTCAAGGTTGCAAAACAAAGTGAGTTTATTCACATCACCTGCTGACTCTGAAGAAGAAAATAATGCATCTAGCACTGCTGACAGTTCGGATGAAGCATGTGATACTGTTTCCAAGGCTTCAGCAGATTCAATGAAAGGACTGATGATCGATACATTTGACTCAGTCCCCTTATCATTTGAAAATGACAGTCCACGCAATGCGAACCTTGCTCCAGAGTCTCCTAATCAAGAGTTAGTTGGACCTGTACAGCAATCTCTTCATCAACAATCATTAGGAAAAAGTAAAGAATCCTCACCATGTTCATCCCCTCGAACGTTGCCTCCTCCACCCCTGACATCAGCATCATTACATCCTGCTGTTCAGCCTCCACCACCACCTCCAGATTCTGATGCTAATACAGGGCCTACATTATCCCTGCCACCTCCACCCAGTAGCATTTCCAATAGAAGTATTCTGAACCCCCTACCTTCCACTACTAGTAGGGTTCTGTCACCGCCGCCGCCACCACCACCCCCGCCGTCTCTTCCTCCCTCTCCTAATGTGTCTAGAAAAGGCCCACCAGCACCTCCTCCTCCGCCGCCACCACCACCTCTTTCTTCTAATTCTCGTCAACAATGTTTGCCACCTCCCCCACCTCCGCCTCCTCCATTTTTGGGAAGTACAACTAACAAGCTAATACCAACAGTGGCACCGCCACCACCACCACCACCACCACCGCCGCCTCCTCCTCCTCTTCCATCCATTTCTGGTACTGGTTCACCGCCACCTCCTCCACCCCCTCCCCCAATGAATTGTAGGCCACCACCCCCTCCTCCACCTCCTGCAGGACCTGGAAGGCCAACCCCACCTCCTCCACCACCAGCACCAAAGCTCCCTAATGCTCCACCTCTGCCGTCAAGTCGTCCTGCAACACCAGCTCCACCCCCACCACCTGGAGGAAAGGGCCCTAGTGCACCACCGCCGCCCCCACCACCTGGAGGAAAGGGCCCTAGTGCACCGCCGCCACCCCCACCATCTGCTGGAAGGGGTAAAGCTTCTTCTGGACCAACAAGTATTGGAAGAGGTCGTGGTGCTGCTAATGCCCCAAAGAAAAATTCGTTGAAGCCTCTACACTGGGTGAAGGTTACTCGTGCAATGCAAGGGAGCTTGTGGGCTGATTCTCAAAAACAGGAAAATGTGTCGAGCGCTCCAGAAATAGATATATCAGAACTTGAAAGTCTATTCTCAGCAGCCTCTGCTTCAGATGGGAAGGGCGTTAAAGCTGGAGGTAGACGTGGGCCAACCATGACCAAACCTGAGAAAGTGCAATTGGTCGACCTGCGTAGAGCATATAACTGTGAAATTATGCTTTCAAAAATAAAGATCCCCCTGCCAGATATGATTAATGCAGTTCTGGCACTGGATTCTTCTGTTCTTGACATTGATCAGGTTGAGAATCTCATTAGATTTTGTCCTACCAAAGAAGAAATGGAAACTTTGAAGAACTATACAGGTGAGAAGGAAATGCTGGGGAAGTGTGAACAGTTTTTCTTAGAGCTGATGAAGGTTCCACGAGTAGAACCCAAGTTGCGAGTATTTGCTTTCAAAATTACCTTTTCTAGTCAGGTGAAAGATTTAAGATTAAACTTGATTACCATCAATAGTGCTGCTAGAGAGGTTAAAGAATCTGCGAAGTTGCGACAGGTAATGCAGACAATTCTTACTTTGGGAAATGCCTTAAATCAAGGCACTGCTCGAGGGTCAGCCATAGGATTTAAATTGGACAGCCTTCTTAAATTGTCTGACACCCGTGCAAGAAACAACAAAATGACTTTAATGCACTATTTGTGTAAGCTTATTGCTGAGAAAATGCCAGAGTTGCTGGATTTTGATAAGGATCTTATTCATTTGGAAGCTGCCTCTAAGATTCCATTGAAAGCTTTAGCTGAAGAAATGCAAGCCGTGAGTAAAGGTCTTGAAAAGGTTGAGCAAGAACTTGCTGCTGCTGAAAACGACGGTGTAATCTCTTCTGGTTTTCGAAAGGTGCTGAAGAGTTTTCTTGATACGGCTGAAGCTGAAGTAAGGTCACTAATCTCCTTGTACTCTGAAGTGGGAAGAAATGCAGATTCTTTGTCTCAATACTTTGGGGAGGATCCATCTCGGTGTCCTTTTGAACAAGTGACACAGGTATTGTTCGTCTTTGTCAAGATGTTCAGCAAGTCGCGAGAGGAAAATGAAAGACTTGCTGATATTGAAAAGAAGAAGCTTGAAAAGGAAGCCATGAAAGAGCGAACTGTAGCTAATTCATCTGCAAAGAAAGATGCTGTGGATAGAGCAACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1173

Amino Acids

128.48

Weight (kDa)

7.14

Isoelectric Point (pI)

62.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PTEN_C2 PF10409 198 - 337 1.9e-37 C2 domain of PTEN tumour-suppressor protein
FH2 PF02181 761 - 1132 1.5e-119 Formin Homology 2 Domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013558)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G31810 AT1G31810
fragaria_vesca FvH4_5g24110 FvH4_5g24110
malus_domestica MD06G1017200.v1.1
prunus_persica Prupe.5G019200_v2.0.a1
pyrus_communis pycom06g01390
rosa_chinensis RchiOBHm_Chr7g0213641
rosa_laevigata RLG00000002794
rosa_multiflora Rmu_sc0008101.1_g000010
rosa_roxburghii Rroxscaffold_3G00245720
rosa_rugosa Rorug07G0143800 Rorug07G0143900
rosa_samantha Rh7AG276700 Rh7BG270900 Rh7CG295700 Rh7DG283000
rosa_wichuraiana Rw7G023880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1246
Acc36I ACCTGC 2 cut(s) 1246, 2526
AccB1I GGYRCC 1 cut(s) 1888
AccB7I CCANNNNNTGG 3 cut(s) 2132, 2174, 2219
AccBSI CCGCTC 1 cut(s) 529
AccI GTMKAC 2 cut(s) 2470, 2514
AccII CGCG 2 cut(s) 1190, 3403
AclI AACGTT 1 cut(s) 1514
AclWI GGATC 5 cut(s) 851, 2557, 3084, 3326, 3339
AcoI YGGCCR 2 cut(s) 395, 587
AcsI RAATTY 4 cut(s) 53, 161, 931, 2293
AcuI CTGAAG 8 cut(s) 1269, 1302, 2424, 3147, 3248, 3270, 3276, 3306
AdeI CACNNNGTG 1 cut(s) 2317
AfaI GTAC 6 cut(s) 119, 477, 1446, 1861, 1951, 3281
AfeI AGCGCT 1 cut(s) 2386
AflII CTTAAG 2 cut(s) 1163, 1180
AhlI ACTAGT 1 cut(s) 1676
AjiI CACGTC 1 cut(s) 2474
AjnI CCWGG 3 cut(s) 2029, 2131, 2173
AjuI GAANNNNNNNTTGG 6 cut(s) 634, 666, 2278, 2310, 2492, 2524
AloI GAACNNNNNNTCC 2 cut(s) 1504, 1536
Alw21I GWGCWC 4 cut(s) 607, 1039, 2155, 2197
Alw26I GTCTC 3 cut(s) 1422, 1725, 3318
Alw44I GTGCAC 2 cut(s) 2151, 2193
AlwI GGATC 5 cut(s) 851, 2557, 3084, 3326, 3339
AlwNI CAGNNNCTG 3 cut(s) 1586, 2030, 2435
Ama87I CYCGRG 1 cut(s) 2934
Aor51HI AGCGCT 1 cut(s) 2386
ApaI GGGCCC 2 cut(s) 2147, 2189
ApaLI GTGCAC 2 cut(s) 2151, 2193
ApoI RAATTY 4 cut(s) 53, 161, 931, 2293
ArsI GACNNNNNNTTYG 4 cut(s) 754, 786, 1184, 1216
AseI ATTAAT 1 cut(s) 2583
AspA2I CCTAGG 1 cut(s) 743
AspLEI GCGC 1 cut(s) 2387
AsuII TTCGAA 2 cut(s) 760, 3217
AsuNHI GCTAGC 1 cut(s) 419
AvaI CYCGRG 1 cut(s) 2934
AvaII GGWCC 3 cut(s) 1439, 2027, 2243
AvrII CCTAGG 1 cut(s) 743
AxyI CCTNAGG 1 cut(s) 108
BaeGI GKGCMC 4 cut(s) 2147, 2155, 2189, 2197
BalI TGGCCA 2 cut(s) 397, 589
BamHI GGATCC 1 cut(s) 3331
BanI GGYRCC 1 cut(s) 1888
BanII GRGCYC 3 cut(s) 1039, 2147, 2189
BarI GAAGNNNNNNTAC 2 cut(s) 2221, 2253
BauI CACGAG 2 cut(s) 2328, 2751
BbsI GAAGAC 1 cut(s) 758
Bbv12I GWGCWC 4 cut(s) 607, 1039, 2155, 2197
BbvCI CCTCAGC 1 cut(s) 993
BccI CCATC 7 cut(s) 35, 541, 1945, 2221, 2438, 2843, 3343
BceAI ACGGC 4 cut(s) 1702, 2077, 3125, 3261
BcgI CGANNNNNNTGC 2 cut(s) 709, 743
BciT130I CCWGG 3 cut(s) 2031, 2133, 2175
BclI TGATCA 1 cut(s) 2623
BcoDI GTCTC 3 cut(s) 1422, 1725, 3318
BcuI ACTAGT 1 cut(s) 1676
BfmI CTRYAG 2 cut(s) 2022, 3474
BfoI RGCGCY 1 cut(s) 2388
BfrI CTTAAG 2 cut(s) 1163, 1180
BfuAI ACCTGC 2 cut(s) 1246, 2526
BlnI CCTAGG 1 cut(s) 743
Bme1390I CCNGG 3 cut(s) 2031, 2133, 2175
Bme18I GGWCC 3 cut(s) 1439, 2027, 2243
BmeT110I CYCGRG 1 cut(s) 2934
BmgBI CACGTC 1 cut(s) 2474
BmiI GGNNCC 6 cut(s) 35, 1890, 2145, 2187, 2748, 3333
BmrFI CCNGG 3 cut(s) 2031, 2133, 2175
BmrI ACTGGG 2 cut(s) 1623, 2323
BmsI GCATC 7 cut(s) 915, 1029, 1135, 1274, 1550, 1579, 3490
BmtI GCTAGC 1 cut(s) 423
BmuI ACTGGG 2 cut(s) 1623, 2323
BpiI GAAGAC 1 cut(s) 758
BplI GAGNNNNNCTC 4 cut(s) 1007, 1039, 1009, 1041
BpmI CTGGAG 7 cut(s) 564, 1395, 1563, 2154, 2196, 2373, 2484
Bpu10I CCTNAGC 3 cut(s) 597, 701, 993
Bpu14I TTCGAA 2 cut(s) 760, 3217
Bsa29I ATCGAT 1 cut(s) 1347
BsaBI GATNNNNATC 3 cut(s) 855, 2834, 3075
BsaJI CCNNGG 3 cut(s) 96, 743, 1311
Bse1I ACTGG 4 cut(s) 1629, 1957, 2318, 2604
Bse21I CCTNAGG 1 cut(s) 108
Bse3DI GCAATG 2 cut(s) 1402, 2340
Bse8I GATNNNNATC 3 cut(s) 855, 2834, 3075
BseBI CCWGG 3 cut(s) 2031, 2133, 2175
BseCI ATCGAT 1 cut(s) 1347
BseDI CCNNGG 3 cut(s) 96, 743, 1311
BseGI GGATG 4 cut(s) 1294, 1502, 1549, 1937
BseJI GATNNNNATC 3 cut(s) 855, 2834, 3075
BseMI GCAATG 2 cut(s) 1402, 2340
BseNI ACTGG 4 cut(s) 1629, 1957, 2318, 2604
BseSI GKGCMC 4 cut(s) 2147, 2155, 2189, 2197
BseYI CCCAGC 1 cut(s) 2707
BsgI GTGCAG 1 cut(s) 649
Bsh1236I CGCG 2 cut(s) 1190, 3403
BshNI GGYRCC 1 cut(s) 1888
BshVI ATCGAT 1 cut(s) 1347
BsiHKAI GWGCWC 4 cut(s) 607, 1039, 2155, 2197
BsiHKCI CYCGRG 1 cut(s) 2934
BslFI GGGAC 1 cut(s) 1349
BsmAI GTCTC 3 cut(s) 1422, 1725, 3318
BsmBI CGTCTC 1 cut(s) 1725
BsmFI GGGAC 1 cut(s) 1349
BsmI GAATGC 2 cut(s) 185, 407
BsoBI CYCGRG 1 cut(s) 2934
Bsp119I TTCGAA 2 cut(s) 760, 3217
Bsp120I GGGCCC 2 cut(s) 2143, 2185
Bsp1286I GDGCHC 6 cut(s) 607, 1039, 2147, 2155, 2189, 2197
Bsp1407I TGTACA 2 cut(s) 475, 1444
Bsp143I GATC 6 cut(s) 856, 1344, 2562, 2623, 3076, 3331
Bsp68I TCGCGA 1 cut(s) 3403
BspDI ATCGAT 1 cut(s) 1347
BspFNI CGCG 2 cut(s) 1190, 3403
BspHI TCATGA 1 cut(s) 873
BspLI GGNNCC 6 cut(s) 35, 1890, 2145, 2187, 2748, 3333
BspMAI CTGCAG 1 cut(s) 2026
BspMI ACCTGC 2 cut(s) 1246, 2526
BspOI GCTAGC 1 cut(s) 423
BspPI GGATC 5 cut(s) 851, 2557, 3084, 3326, 3339
BspT104I TTCGAA 2 cut(s) 760, 3217
BspT107I GGYRCC 1 cut(s) 1888
BspTI CTTAAG 2 cut(s) 1163, 1180
BsrBI CCGCTC 1 cut(s) 529
BsrDI GCAATG 2 cut(s) 1402, 2340
BsrGI TGTACA 2 cut(s) 475, 1444
BsrI ACTGG 4 cut(s) 1629, 1957, 2318, 2604
BssECI CCNNGG 3 cut(s) 96, 743, 1311
BssMI GATC 6 cut(s) 856, 1344, 2562, 2623, 3076, 3331
BssSI CACGAG 2 cut(s) 2328, 2751
BssT1I CCWWGG 2 cut(s) 743, 1311
Bst2BI CACGAG 2 cut(s) 2328, 2751
Bst2UI CCWGG 3 cut(s) 2031, 2133, 2175
Bst6I CTCTTC 6 cut(s) 1461, 1728, 1938, 2254, 3211, 3224
BstAFI CTTAAG 2 cut(s) 1163, 1180
BstAPI GCANNNNNTGC 1 cut(s) 2435
BstAUI TGTACA 2 cut(s) 475, 1444
BstBI TTCGAA 2 cut(s) 760, 3217
BstC8I GCNNGC 4 cut(s) 353, 421, 603, 3138
BstENI CCTNNNNNAGG 2 cut(s) 704, 2022
BstF5I GGATG 4 cut(s) 1294, 1502, 1549, 1937
BstFNI CGCG 2 cut(s) 1190, 3403
BstH2I RGCGCY 1 cut(s) 2388
BstHHI GCGC 1 cut(s) 2387
BstKTI GATC 6 cut(s) 859, 1347, 2565, 2626, 3079, 3334
BstMAI GTCTC 3 cut(s) 1422, 1725, 3318
BstMBI GATC 6 cut(s) 856, 1344, 2562, 2623, 3076, 3331
BstMWI GCNNNNNNNGC 8 cut(s) 352, 1168, 1406, 2114, 2279, 2435, 2594, 3058
BstNI CCWGG 3 cut(s) 2031, 2133, 2175
BstNSI RCATGY 1 cut(s) 1299
BstSCI CCNGG 3 cut(s) 2029, 2131, 2173
BstSFI CTRYAG 2 cut(s) 2022, 3474
BstSLI GKGCMC 4 cut(s) 2147, 2155, 2189, 2197
BstUI CGCG 2 cut(s) 1190, 3403
BstV2I GAAGAC 1 cut(s) 758
BstX2I RGATCY 3 cut(s) 2562, 3076, 3331
BstYI RGATCY 3 cut(s) 2562, 3076, 3331
Bsu15I ATCGAT 1 cut(s) 1347
Bsu36I CCTNAGG 1 cut(s) 108
BsuTUI ATCGAT 1 cut(s) 1347
BtrI CACGTC 1 cut(s) 2474
BtsCI GGATG 4 cut(s) 1294, 1502, 1549, 1937
BtsI GCAGTG 3 cut(s) 897, 1272, 2928
BtsIMutI CAGTG 9 cut(s) 376, 398, 812, 897, 1272, 1890, 2311, 2597, 2928
BtuMI TCGCGA 1 cut(s) 3403
BveI ACCTGC 2 cut(s) 1246, 2526
Cac8I GCNNGC 4 cut(s) 353, 421, 603, 3138
CaiI CAGNNNCTG 3 cut(s) 1586, 2030, 2435
CciI TCATGA 1 cut(s) 873
CfoI GCGC 1 cut(s) 2387
ClaI ATCGAT 1 cut(s) 1347
CseI GACGC 1 cut(s) 1196
Csp6I GTAC 6 cut(s) 118, 476, 1445, 1860, 1950, 3280
CviAII CATG 9 cut(s) 134, 155, 739, 874, 1296, 1497, 2485, 3460, 3519
CviQI GTAC 6 cut(s) 118, 476, 1445, 1860, 1950, 3280
DpnI GATC 6 cut(s) 858, 1346, 2564, 2625, 3078, 3333
DpnII GATC 6 cut(s) 856, 1344, 2562, 2623, 3076, 3331
DraI TTTAAA 3 cut(s) 522, 1053, 2956
DraIII CACNNNGTG 1 cut(s) 2317
EaeI YGGCCR 2 cut(s) 395, 587
Eam1104I CTCTTC 6 cut(s) 1461, 1728, 1938, 2254, 3211, 3224
EarI CTCTTC 6 cut(s) 1461, 1728, 1938, 2254, 3211, 3224
EciI GGCGGA 2 cut(s) 1764, 1827
Ecl136II GAGCTC 1 cut(s) 1037
Eco130I CCWWGG 2 cut(s) 743, 1311
Eco24I GRGCYC 3 cut(s) 1039, 2147, 2189
Eco47I GGWCC 3 cut(s) 1439, 2027, 2243
Eco47III AGCGCT 1 cut(s) 2386
Eco53kI GAGCTC 1 cut(s) 1037
Eco57I CTGAAG 8 cut(s) 1269, 1302, 2424, 3147, 3248, 3270, 3276, 3306
Eco81I CCTNAGG 1 cut(s) 108
Eco88I CYCGRG 1 cut(s) 2934
EcoICRI GAGCTC 1 cut(s) 1037
EcoNI CCTNNNNNAGG 2 cut(s) 704, 2022
EcoO109I RGGNCCY 7 cut(s) 33, 1601, 2027, 2143, 2144, 2185, 2186
EcoRI GAATTC 2 cut(s) 161, 931
EcoRII CCWGG 3 cut(s) 2029, 2131, 2173
EcoT14I CCWWGG 2 cut(s) 743, 1311
EcoT22I ATGCAT 1 cut(s) 1267
EcoT38I GRGCYC 3 cut(s) 1039, 2147, 2189
ErhI CCWWGG 2 cut(s) 743, 1311
Esp3I CGTCTC 1 cut(s) 1725
FaeI CATG 9 cut(s) 137, 158, 742, 877, 1299, 1500, 2488, 3463, 3522
FaqI GGGAC 1 cut(s) 1349
FatI CATG 9 cut(s) 133, 154, 738, 873, 1295, 1496, 2484, 3459, 3518
FauI CCCGC 1 cut(s) 1722
FbaI TGATCA 1 cut(s) 2623
FblI GTMKAC 2 cut(s) 2470, 2514
FokI GGATG 4 cut(s) 1301, 1489, 1536, 1924
FriOI GRGCYC 3 cut(s) 1039, 2147, 2189
GlaI GCGC 1 cut(s) 2386
GsaI CCCAGC 1 cut(s) 2711
GsuI CTGGAG 7 cut(s) 564, 1395, 1563, 2154, 2196, 2373, 2484
HaeII RGCGCY 1 cut(s) 2388
HgaI GACGC 1 cut(s) 1196
HhaI GCGC 1 cut(s) 2387
Hin1II CATG 9 cut(s) 137, 158, 742, 877, 1299, 1500, 2488, 3463, 3522
Hin6I GCGC 1 cut(s) 2385
HinP1I GCGC 1 cut(s) 2385
HincII GTYRAC 2 cut(s) 1811, 2515
HindII GTYRAC 2 cut(s) 1811, 2515
HindIII AAGCTT 5 cut(s) 1086, 2232, 3032, 3117, 3443
Hpy99I CGWCG 1 cut(s) 3197
HpyCH4IV ACGT 4 cut(s) 211, 558, 1514, 2473
HpyF10VI GCNNNNNNNGC 8 cut(s) 352, 1168, 1406, 2114, 2279, 2435, 2594, 3058
HpySE526I ACGT 4 cut(s) 211, 558, 1514, 2473
Hsp92II CATG 9 cut(s) 137, 158, 742, 877, 1299, 1500, 2488, 3463, 3522
HspAI GCGC 1 cut(s) 2385
Ksp22I TGATCA 1 cut(s) 2623
Kzo9I GATC 6 cut(s) 856, 1344, 2562, 2623, 3076, 3331
LweI GCATC 7 cut(s) 915, 1029, 1135, 1274, 1550, 1579, 3490
MaeII ACGT 4 cut(s) 211, 558, 1514, 2473
MalI GATC 6 cut(s) 858, 1346, 2564, 2625, 3078, 3333
MbiI CCGCTC 1 cut(s) 529
MboI GATC 6 cut(s) 856, 1344, 2562, 2623, 3076, 3331
MfeI CAATTG 1 cut(s) 2507
MflI RGATCY 3 cut(s) 2562, 3076, 3331
MhlI GDGCHC 6 cut(s) 607, 1039, 2147, 2155, 2189, 2197
MlsI TGGCCA 2 cut(s) 397, 589
MluNI TGGCCA 2 cut(s) 397, 589
MlyI GAGTC 4 cut(s) 457, 1238, 1352, 1424
MmeI TCCRAC 3 cut(s) 813, 1064, 1417
Mox20I TGGCCA 2 cut(s) 397, 589
Mph1103I ATGCAT 1 cut(s) 1267
MscI TGGCCA 2 cut(s) 397, 589
MslI CAYNNNNRTG 2 cut(s) 450, 3340
Msp20I TGGCCA 2 cut(s) 397, 589
MspA1I CMGCKG 1 cut(s) 508
MspCI CTTAAG 2 cut(s) 1163, 1180
MspR9I CCNGG 3 cut(s) 2031, 2133, 2175
MunI CAATTG 1 cut(s) 2507
Mva1269I GAATGC 2 cut(s) 185, 407
MvaI CCWGG 3 cut(s) 2031, 2133, 2175
MvnI CGCG 2 cut(s) 1190, 3403
MwoI GCNNNNNNNGC 8 cut(s) 352, 1168, 1406, 2114, 2279, 2435, 2594, 3058
NdeII GATC 6 cut(s) 856, 1344, 2562, 2623, 3076, 3331
NheI GCTAGC 1 cut(s) 419
NlaIII CATG 9 cut(s) 137, 158, 742, 877, 1299, 1500, 2488, 3463, 3522
NlaIV GGNNCC 6 cut(s) 35, 1890, 2145, 2187, 2748, 3333
NmuCI GTSAC 5 cut(s) 513, 1184, 1689, 3264, 3358
NruI TCGCGA 1 cut(s) 3403
NsiI ATGCAT 1 cut(s) 1267
NspI RCATGY 1 cut(s) 1299
NspV TTCGAA 2 cut(s) 760, 3217
PaeR7I CTCGAG 1 cut(s) 2934
PagI TCATGA 1 cut(s) 873
PaqCI CACCTGC 1 cut(s) 1246
PcsI WCGNNNNNNNCGW 1 cut(s) 766
PctI GAATGC 2 cut(s) 185, 407
PflFI GACNNNGTC 1 cut(s) 1361
PflMI CCANNNNNTGG 3 cut(s) 2132, 2174, 2219
PleI GAGTC 4 cut(s) 457, 1238, 1352, 1423
PpsI GAGTC 4 cut(s) 457, 1238, 1352, 1423
PpuMI RGGWCCY 1 cut(s) 2027
PshBI ATTAAT 1 cut(s) 2583
Psp124BI GAGCTC 1 cut(s) 1039
Psp1406I AACGTT 1 cut(s) 1514
Psp5II RGGWCCY 1 cut(s) 2027
Psp6I CCWGG 3 cut(s) 2029, 2131, 2173
PspFI CCCAGC 1 cut(s) 2707
PspGI CCWGG 3 cut(s) 2029, 2131, 2173
PspN4I GGNNCC 6 cut(s) 35, 1890, 2145, 2187, 2748, 3333
PspOMI GGGCCC 2 cut(s) 2143, 2185
PspPPI RGGWCCY 1 cut(s) 2027
PspXI VCTCGAGB 1 cut(s) 2934
PstI CTGCAG 1 cut(s) 2026
PstNI CAGNNNCTG 3 cut(s) 1586, 2030, 2435
PsuI RGATCY 3 cut(s) 2562, 3076, 3331
PsyI GACNNNGTC 1 cut(s) 1361
PvuII CAGCTG 1 cut(s) 508
RruI TCGCGA 1 cut(s) 3403
RsaI GTAC 6 cut(s) 119, 477, 1446, 1861, 1951, 3281
RsaNI GTAC 6 cut(s) 118, 476, 1445, 1860, 1950, 3280
RseI CAYNNNNRTG 2 cut(s) 450, 3340
SacI GAGCTC 1 cut(s) 1039
SalI GTCGAC 1 cut(s) 2513
Sau3AI GATC 6 cut(s) 856, 1344, 2562, 2623, 3076, 3331
SbfI CCTGCAGG 1 cut(s) 2026
SchI GAGTC 4 cut(s) 457, 1238, 1352, 1424
ScrFI CCNGG 3 cut(s) 2031, 2133, 2175
SdaI CCTGCAGG 1 cut(s) 2026
SduI GDGCHC 6 cut(s) 607, 1039, 2147, 2155, 2189, 2197
SfaNI GCATC 7 cut(s) 915, 1029, 1135, 1274, 1550, 1579, 3490
SfcI CTRYAG 2 cut(s) 2022, 3474
Sfr274I CTCGAG 1 cut(s) 2934
SfuI TTCGAA 2 cut(s) 760, 3217
SinI GGWCC 3 cut(s) 1439, 2027, 2243
SlaI CTCGAG 1 cut(s) 2934
SmiI ATTTAAAT 1 cut(s) 2956
SmiMI CAYNNNNRTG 2 cut(s) 450, 3340
SmlI CTYRAG 3 cut(s) 1163, 1180, 2934
SmoI CTYRAG 3 cut(s) 1163, 1180, 2934
SpeI ACTAGT 1 cut(s) 1676
Sse8387I CCTGCAGG 1 cut(s) 2026
SstI GAGCTC 1 cut(s) 1039
StyD4I CCNGG 3 cut(s) 2029, 2131, 2173
StyI CCWWGG 2 cut(s) 743, 1311
SwaI ATTTAAAT 1 cut(s) 2956
TaiI ACGT 4 cut(s) 214, 561, 1517, 2476
TaqI TCGA 9 cut(s) 631, 719, 760, 1347, 1510, 2381, 2514, 2935, 3217
TatI WGTACW 4 cut(s) 475, 1444, 1859, 3279
TauI GCSGC 6 cut(s) 1699, 1702, 1780, 1921, 2164, 2203
TscAI CASTG 9 cut(s) 383, 405, 812, 904, 1279, 1890, 2318, 2604, 2935
TseFI GTSAC 5 cut(s) 513, 1184, 1689, 3264, 3358
Tsp45I GTSAC 5 cut(s) 513, 1184, 1689, 3264, 3358
TspGWI ACGGA 1 cut(s) 872
TspRI CASTG 9 cut(s) 383, 405, 812, 904, 1279, 1890, 2318, 2604, 2935
Tth111I GACNNNGTC 1 cut(s) 1361
Van91I CCANNNNNTGG 3 cut(s) 2132, 2174, 2219
Vha464I CTTAAG 2 cut(s) 1163, 1180
VneI GTGCAC 2 cut(s) 2151, 2193
VpaK11BI GGWCC 3 cut(s) 1439, 2027, 2243
VspI ATTAAT 1 cut(s) 2583
XagI CCTNNNNNAGG 2 cut(s) 704, 2022
XapI RAATTY 4 cut(s) 53, 161, 931, 2293
XbaI TCTAGA 1 cut(s) 1745
XceI RCATGY 1 cut(s) 1299
XcmI CCANNNNNNNNNTGG 1 cut(s) 2665
XhoI CTCGAG 1 cut(s) 2934
XmaJI CCTAGG 1 cut(s) 743
XmiI GTMKAC 2 cut(s) 2470, 2514
Zsp2I ATGCAT 1 cut(s) 1267
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.