Formin-like protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G31810 AT1G31810 |
| fragaria_vesca | FvH4_5g24110 FvH4_5g24110 |
| malus_domestica | MD06G1017200.v1.1 |
| prunus_persica | Prupe.5G019200_v2.0.a1 |
| pyrus_communis | pycom06g01390 |
| rosa_chinensis | RchiOBHm_Chr7g0213641 |
| rosa_laevigata | RLG00000002794 |
| rosa_multiflora | Rmu_sc0008101.1_g000010 |
| rosa_roxburghii | Rroxscaffold_3G00245720 |
| rosa_rugosa | Rorug07G0143800 Rorug07G0143900 |
| rosa_samantha | Rh7AG276700 Rh7BG270900 Rh7CG295700 Rh7DG283000 |
| rosa_wichuraiana | Rw7G023880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1111 |
| Acc36I | ACCTGC | 2 cut(s) | 1111, 2427 |
| AccB1I | GGYRCC | 1 cut(s) | 1759 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 2033, 2075, 2120 |
| AccBSI | CCGCTC | 1 cut(s) | 394 |
| AccI | GTMKAC | 2 cut(s) | 2371, 2415 |
| AccII | CGCG | 1 cut(s) | 3514 |
| AclI | AACGTT | 1 cut(s) | 1379 |
| AclWI | GGATC | 8 cut(s) | 716, 729, 1936, 2458, 2985, 3137, 3437, 3450 |
| AcoI | YGGCCR | 3 cut(s) | 260, 452, 3208 |
| AcsI | RAATTY | 3 cut(s) | 28, 796, 2194 |
| AcuI | CTGAAG | 8 cut(s) | 1134, 1167, 2325, 3048, 3359, 3381, 3387, 3417 |
| AdeI | CACNNNGTG | 2 cut(s) | 2218, 3334 |
| AfaI | GTAC | 4 cut(s) | 342, 1311, 1732, 3392 |
| AfeI | AGCGCT | 1 cut(s) | 2287 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 571, 609, 859, 1724, 2033, 2036, 2075, 2078, 2120 |
| AflII | CTTAAG | 2 cut(s) | 1028, 1045 |
| AhlI | ACTAGT | 1 cut(s) | 1541 |
| AjnI | CCWGG | 3 cut(s) | 608, 2032, 2074 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 499, 531, 2179, 2211, 2393, 2425 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1369, 1401 |
| Alw21I | GWGCWC | 4 cut(s) | 472, 904, 2056, 2098 |
| Alw26I | GTCTC | 3 cut(s) | 1287, 1602, 3429 |
| Alw44I | GTGCAC | 2 cut(s) | 2052, 2094 |
| AlwI | GGATC | 8 cut(s) | 716, 729, 1936, 2458, 2985, 3137, 3437, 3450 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1432, 1451, 2336 |
| Ama87I | CYCGRG | 1 cut(s) | 2835 |
| Aor51HI | AGCGCT | 1 cut(s) | 2287 |
| AoxI | GGCC | 9 cut(s) | 260, 452, 1466, 1630, 1937, 2044, 2086, 2378, 3208 |
| ApaI | GGGCCC | 2 cut(s) | 2048, 2090 |
| ApaLI | GTGCAC | 2 cut(s) | 2052, 2094 |
| ApoI | RAATTY | 3 cut(s) | 28, 796, 2194 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 619, 651, 1049, 1081 |
| AseI | ATTAAT | 1 cut(s) | 2484 |
| AspLEI | GCGC | 1 cut(s) | 2288 |
| AspS9I | GGNCC | 9 cut(s) | 1304, 1466, 1631, 2044, 2045, 2086, 2087, 2144, 2378 |
| AsuII | TTCGAA | 1 cut(s) | 625 |
| AsuNHI | GCTAGC | 1 cut(s) | 284 |
| AvaI | CYCGRG | 1 cut(s) | 2835 |
| AvaII | GGWCC | 2 cut(s) | 1304, 2144 |
| BaeGI | GKGCMC | 4 cut(s) | 2048, 2056, 2090, 2098 |
| BalI | TGGCCA | 2 cut(s) | 262, 454 |
| BamHI | GGATCC | 2 cut(s) | 721, 3442 |
| BanI | GGYRCC | 1 cut(s) | 1759 |
| BanII | GRGCYC | 3 cut(s) | 904, 2048, 2090 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2122, 2154 |
| BauI | CACGAG | 2 cut(s) | 2229, 2652 |
| BbsI | GAAGAC | 1 cut(s) | 623 |
| Bbv12I | GWGCWC | 4 cut(s) | 472, 904, 2056, 2098 |
| BbvCI | CCTCAGC | 1 cut(s) | 858 |
| BccI | CCATC | 9 cut(s) | 406, 1804, 1864, 1924, 2122, 2339, 2744, 3317, 3454 |
| BceAI | ACGGC | 3 cut(s) | 541, 1978, 3372 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 574, 608 |
| BciT130I | CCWGG | 3 cut(s) | 610, 2034, 2076 |
| BclI | TGATCA | 1 cut(s) | 2524 |
| BcoDI | GTCTC | 3 cut(s) | 1287, 1602, 3429 |
| BcuI | ACTAGT | 1 cut(s) | 1541 |
| BfaI | CTAG | 9 cut(s) | 285, 960, 1134, 1542, 1623, 2049, 2091, 2700, 2751 |
| BfmI | CTRYAG | 1 cut(s) | 3585 |
| BfoI | RGCGCY | 1 cut(s) | 2289 |
| BfrI | CTTAAG | 2 cut(s) | 1028, 1045 |
| BfuAI | ACCTGC | 2 cut(s) | 1111, 2427 |
| Bme1390I | CCNGG | 3 cut(s) | 610, 2034, 2076 |
| Bme18I | GGWCC | 2 cut(s) | 1304, 2144 |
| BmeT110I | CYCGRG | 1 cut(s) | 2835 |
| BmgT120I | GGNCC | 9 cut(s) | 1304, 1466, 1631, 2044, 2045, 2086, 2087, 2144, 2378 |
| BmiI | GGNNCC | 7 cut(s) | 723, 1551, 1761, 2046, 2088, 2649, 3444 |
| BmrFI | CCNGG | 3 cut(s) | 610, 2034, 2076 |
| BmrI | ACTGGG | 2 cut(s) | 1488, 2224 |
| BmsI | GCATC | 9 cut(s) | 780, 894, 1000, 1042, 1139, 1415, 1444, 3236, 3601 |
| BmtI | GCTAGC | 1 cut(s) | 288 |
| BmuI | ACTGGG | 2 cut(s) | 1488, 2224 |
| BpiI | GAAGAC | 1 cut(s) | 623 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 872, 904, 874, 906 |
| BpmI | CTGGAG | 7 cut(s) | 429, 1260, 1428, 2055, 2097, 2274, 2385 |
| Bpu10I | CCTNAGC | 3 cut(s) | 462, 566, 858 |
| Bpu14I | TTCGAA | 1 cut(s) | 625 |
| Bsa29I | ATCGAT | 1 cut(s) | 1212 |
| BsaBI | GATNNNNATC | 3 cut(s) | 720, 2735, 2976 |
| BsaJI | CCNNGG | 2 cut(s) | 608, 1176 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 678, 708, 1369, 1399, 1956, 1986, 2002, 2032 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 571, 609, 859, 1724, 2033, 2036, 2075, 2078, 2120 |
| Bse1I | ACTGG | 3 cut(s) | 1494, 2219, 2505 |
| Bse3DI | GCAATG | 3 cut(s) | 1267, 2241, 2937 |
| Bse8I | GATNNNNATC | 3 cut(s) | 720, 2735, 2976 |
| BseBI | CCWGG | 3 cut(s) | 610, 2034, 2076 |
| BseCI | ATCGAT | 1 cut(s) | 1212 |
| BseDI | CCNNGG | 2 cut(s) | 608, 1176 |
| BseGI | GGATG | 8 cut(s) | 1159, 1367, 1414, 1475, 1796, 1856, 1916, 3227 |
| BseJI | GATNNNNATC | 3 cut(s) | 720, 2735, 2976 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 571, 609, 859, 1724, 2033, 2036, 2075, 2078, 2120 |
| BseMI | GCAATG | 3 cut(s) | 1267, 2241, 2937 |
| BseMII | CTCAG | 9 cut(s) | 5, 83, 416, 453, 849, 1239, 2340, 2388, 2934 |
| BseNI | ACTGG | 3 cut(s) | 1494, 2219, 2505 |
| BseSI | GKGCMC | 4 cut(s) | 2048, 2056, 2090, 2098 |
| BseYI | CCCAGC | 1 cut(s) | 2608 |
| BsgI | GTGCAG | 3 cut(s) | 514, 1839, 1899 |
| Bsh1236I | CGCG | 1 cut(s) | 3514 |
| BshFI | GGCC | 9 cut(s) | 262, 454, 1468, 1632, 1939, 2046, 2088, 2380, 3210 |
| BshNI | GGYRCC | 1 cut(s) | 1759 |
| BshVI | ATCGAT | 1 cut(s) | 1212 |
| BsiHKAI | GWGCWC | 4 cut(s) | 472, 904, 2056, 2098 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2835 |
| BsiSI | CCGG | 1 cut(s) | 3211 |
| BslFI | GGGAC | 2 cut(s) | 1214, 3173 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 571, 609, 859, 1724, 2033, 2036, 2075, 2078, 2120 |
| BsmAI | GTCTC | 3 cut(s) | 1287, 1602, 3429 |
| BsmFI | GGGAC | 2 cut(s) | 1214, 3173 |
| BsmI | GAATGC | 2 cut(s) | 52, 272 |
| BsnI | GGCC | 9 cut(s) | 262, 454, 1468, 1632, 1939, 2046, 2088, 2380, 3210 |
| BsoBI | CYCGRG | 1 cut(s) | 2835 |
| Bsp119I | TTCGAA | 1 cut(s) | 625 |
| Bsp120I | GGGCCC | 2 cut(s) | 2044, 2086 |
| Bsp1286I | GDGCHC | 6 cut(s) | 472, 904, 2048, 2056, 2090, 2098 |
| Bsp1407I | TGTACA | 2 cut(s) | 340, 1309 |
| Bsp143I | GATC | 8 cut(s) | 721, 1209, 1928, 2463, 2524, 2977, 3129, 3442 |
| Bsp68I | TCGCGA | 1 cut(s) | 3514 |
| BspANI | GGCC | 9 cut(s) | 262, 454, 1468, 1632, 1939, 2046, 2088, 2380, 3210 |
| BspCNI | CTCAG | 9 cut(s) | 6, 84, 415, 454, 850, 1238, 2339, 2389, 2935 |
| BspDI | ATCGAT | 1 cut(s) | 1212 |
| BspFNI | CGCG | 1 cut(s) | 3514 |
| BspLI | GGNNCC | 7 cut(s) | 723, 1551, 1761, 2046, 2088, 2649, 3444 |
| BspMI | ACCTGC | 2 cut(s) | 1111, 2427 |
| BspOI | GCTAGC | 1 cut(s) | 288 |
| BspPI | GGATC | 8 cut(s) | 716, 729, 1936, 2458, 2985, 3137, 3437, 3450 |
| BspT104I | TTCGAA | 1 cut(s) | 625 |
| BspT107I | GGYRCC | 1 cut(s) | 1759 |
| BspTI | CTTAAG | 2 cut(s) | 1028, 1045 |
| BsrBI | CCGCTC | 1 cut(s) | 394 |
| BsrDI | GCAATG | 3 cut(s) | 1267, 2241, 2937 |
| BsrGI | TGTACA | 2 cut(s) | 340, 1309 |
| BsrI | ACTGG | 3 cut(s) | 1494, 2219, 2505 |
| BssECI | CCNNGG | 2 cut(s) | 608, 1176 |
| BssMI | GATC | 8 cut(s) | 721, 1209, 1928, 2463, 2524, 2977, 3129, 3442 |
| BssSI | CACGAG | 2 cut(s) | 2229, 2652 |
| BssT1I | CCWWGG | 1 cut(s) | 1176 |
| Bst2BI | CACGAG | 2 cut(s) | 2229, 2652 |
| Bst2UI | CCWGG | 3 cut(s) | 610, 2034, 2076 |
| Bst6I | CTCTTC | 9 cut(s) | 1326, 1605, 1615, 1797, 1857, 1917, 2155, 3112, 3335 |
| BstAFI | CTTAAG | 2 cut(s) | 1028, 1045 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 2336, 3233 |
| BstAUI | TGTACA | 2 cut(s) | 340, 1309 |
| BstBI | TTCGAA | 1 cut(s) | 625 |
| BstC8I | GCNNGC | 4 cut(s) | 220, 286, 468, 3039 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 569 |
| BstF5I | GGATG | 8 cut(s) | 1159, 1367, 1414, 1475, 1796, 1856, 1916, 3227 |
| BstFNI | CGCG | 1 cut(s) | 3514 |
| BstH2I | RGCGCY | 1 cut(s) | 2289 |
| BstHHI | GCGC | 1 cut(s) | 2288 |
| BstKTI | GATC | 8 cut(s) | 724, 1212, 1931, 2466, 2527, 2980, 3132, 3445 |
| BstMAI | GTCTC | 3 cut(s) | 1287, 1602, 3429 |
| BstMBI | GATC | 8 cut(s) | 721, 1209, 1928, 2463, 2524, 2977, 3129, 3442 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 219, 1033, 1591, 1817, 2015, 2336, 2495, 2959, 3233 |
| BstNI | CCWGG | 3 cut(s) | 610, 2034, 2076 |
| BstNSI | RCATGY | 1 cut(s) | 1164 |
| BstSCI | CCNGG | 3 cut(s) | 608, 2032, 2074 |
| BstSFI | CTRYAG | 1 cut(s) | 3585 |
| BstSLI | GKGCMC | 4 cut(s) | 2048, 2056, 2090, 2098 |
| BstUI | CGCG | 1 cut(s) | 3514 |
| BstV2I | GAAGAC | 1 cut(s) | 623 |
| BstX2I | RGATCY | 5 cut(s) | 721, 1928, 2463, 2977, 3442 |
| BstYI | RGATCY | 5 cut(s) | 721, 1928, 2463, 2977, 3442 |
| Bsu15I | ATCGAT | 1 cut(s) | 1212 |
| BsuRI | GGCC | 9 cut(s) | 262, 454, 1468, 1632, 1939, 2046, 2088, 2380, 3210 |
| BsuTUI | ATCGAT | 1 cut(s) | 1212 |
| BtsCI | GGATG | 8 cut(s) | 1159, 1367, 1414, 1475, 1796, 1856, 1916, 3227 |
| BtsI | GCAGTG | 4 cut(s) | 762, 1137, 1562, 2829 |
| BtsIMutI | CAGTG | 9 cut(s) | 263, 677, 762, 1137, 1562, 1761, 2212, 2498, 2829 |
| BtuMI | TCGCGA | 1 cut(s) | 3514 |
| BveI | ACCTGC | 2 cut(s) | 1111, 2427 |
| Cac8I | GCNNGC | 4 cut(s) | 220, 286, 468, 3039 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1432, 1451, 2336 |
| CfoI | GCGC | 1 cut(s) | 2288 |
| Cfr13I | GGNCC | 9 cut(s) | 1304, 1466, 1631, 2044, 2045, 2086, 2087, 2144, 2378 |
| ClaI | ATCGAT | 1 cut(s) | 1212 |
| CseI | GACGC | 1 cut(s) | 628 |
| Csp6I | GTAC | 4 cut(s) | 341, 1310, 1731, 3391 |
| CviAII | CATG | 7 cut(s) | 22, 604, 1161, 1362, 2386, 3571, 3630 |
| CviQI | GTAC | 4 cut(s) | 341, 1310, 1731, 3391 |
| DpnI | GATC | 8 cut(s) | 723, 1211, 1930, 2465, 2526, 2979, 3131, 3444 |
| DpnII | GATC | 8 cut(s) | 721, 1209, 1928, 2463, 2524, 2977, 3129, 3442 |
| DraI | TTTAAA | 3 cut(s) | 387, 918, 2857 |
| DraIII | CACNNNGTG | 2 cut(s) | 2218, 3334 |
| EaeI | YGGCCR | 3 cut(s) | 260, 452, 3208 |
| Eam1104I | CTCTTC | 9 cut(s) | 1326, 1605, 1615, 1797, 1857, 1917, 2155, 3112, 3335 |
| EarI | CTCTTC | 9 cut(s) | 1326, 1605, 1615, 1797, 1857, 1917, 2155, 3112, 3335 |
| EciI | GGCGGA | 2 cut(s) | 1638, 1698 |
| Ecl136II | GAGCTC | 1 cut(s) | 902 |
| Eco130I | CCWWGG | 1 cut(s) | 1176 |
| Eco24I | GRGCYC | 3 cut(s) | 904, 2048, 2090 |
| Eco47I | GGWCC | 2 cut(s) | 1304, 2144 |
| Eco47III | AGCGCT | 1 cut(s) | 2287 |
| Eco53kI | GAGCTC | 1 cut(s) | 902 |
| Eco57I | CTGAAG | 8 cut(s) | 1134, 1167, 2325, 3048, 3359, 3381, 3387, 3417 |
| Eco88I | CYCGRG | 1 cut(s) | 2835 |
| EcoICRI | GAGCTC | 1 cut(s) | 902 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 569 |
| EcoO109I | RGGNCCY | 5 cut(s) | 1466, 2044, 2045, 2086, 2087 |
| EcoRI | GAATTC | 2 cut(s) | 28, 796 |
| EcoRII | CCWGG | 3 cut(s) | 608, 2032, 2074 |
| EcoT14I | CCWWGG | 1 cut(s) | 1176 |
| EcoT22I | ATGCAT | 1 cut(s) | 1132 |
| EcoT38I | GRGCYC | 3 cut(s) | 904, 2048, 2090 |
| ErhI | CCWWGG | 1 cut(s) | 1176 |
| FaeI | CATG | 7 cut(s) | 25, 607, 1164, 1365, 2389, 3574, 3633 |
| FaqI | GGGAC | 2 cut(s) | 1214, 3173 |
| FatI | CATG | 7 cut(s) | 21, 603, 1160, 1361, 2385, 3570, 3629 |
| FauI | CCCGC | 1 cut(s) | 1590 |
| FbaI | TGATCA | 1 cut(s) | 2524 |
| FblI | GTMKAC | 2 cut(s) | 2371, 2415 |
| FokI | GGATG | 8 cut(s) | 1166, 1354, 1401, 1462, 1783, 1843, 1903, 3214 |
| FriOI | GRGCYC | 3 cut(s) | 904, 2048, 2090 |
| FspBI | CTAG | 9 cut(s) | 285, 960, 1134, 1542, 1623, 2049, 2091, 2700, 2751 |
| GlaI | GCGC | 1 cut(s) | 2287 |
| GsaI | CCCAGC | 1 cut(s) | 2612 |
| GsuI | CTGGAG | 7 cut(s) | 429, 1260, 1428, 2055, 2097, 2274, 2385 |
| HaeII | RGCGCY | 1 cut(s) | 2289 |
| HaeIII | GGCC | 9 cut(s) | 262, 454, 1468, 1632, 1939, 2046, 2088, 2380, 3210 |
| HapII | CCGG | 1 cut(s) | 3211 |
| HgaI | GACGC | 1 cut(s) | 628 |
| HhaI | GCGC | 1 cut(s) | 2288 |
| Hin1II | CATG | 7 cut(s) | 25, 607, 1164, 1365, 2389, 3574, 3633 |
| Hin6I | GCGC | 1 cut(s) | 2286 |
| HinP1I | GCGC | 1 cut(s) | 2286 |
| HincII | GTYRAC | 1 cut(s) | 2416 |
| HindII | GTYRAC | 1 cut(s) | 2416 |
| HindIII | AAGCTT | 4 cut(s) | 951, 2133, 3018, 3554 |
| HpaII | CCGG | 1 cut(s) | 3211 |
| Hpy99I | CGWCG | 1 cut(s) | 3098 |
| HpyCH4IV | ACGT | 3 cut(s) | 78, 423, 1379 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 219, 1033, 1591, 1817, 2015, 2336, 2495, 2959, 3233 |
| HpySE526I | ACGT | 3 cut(s) | 78, 423, 1379 |
| Hsp92II | CATG | 7 cut(s) | 25, 607, 1164, 1365, 2389, 3574, 3633 |
| HspAI | GCGC | 1 cut(s) | 2286 |
| Ksp22I | TGATCA | 1 cut(s) | 2524 |
| Kzo9I | GATC | 8 cut(s) | 721, 1209, 1928, 2463, 2524, 2977, 3129, 3442 |
| LweI | GCATC | 9 cut(s) | 780, 894, 1000, 1042, 1139, 1415, 1444, 3236, 3601 |
| MaeI | CTAG | 9 cut(s) | 285, 960, 1134, 1542, 1623, 2049, 2091, 2700, 2751 |
| MaeII | ACGT | 3 cut(s) | 78, 423, 1379 |
| MaeIII | GTNAC | 9 cut(s) | 9, 17, 114, 378, 410, 1554, 2224, 3375, 3469 |
| MalI | GATC | 8 cut(s) | 723, 1211, 1930, 2465, 2526, 2979, 3131, 3444 |
| MbiI | CCGCTC | 1 cut(s) | 394 |
| MboI | GATC | 8 cut(s) | 721, 1209, 1928, 2463, 2524, 2977, 3129, 3442 |
| MfeI | CAATTG | 1 cut(s) | 2408 |
| MflI | RGATCY | 5 cut(s) | 721, 1928, 2463, 2977, 3442 |
| MhlI | GDGCHC | 6 cut(s) | 472, 904, 2048, 2056, 2090, 2098 |
| MlsI | TGGCCA | 2 cut(s) | 262, 454 |
| MluNI | TGGCCA | 2 cut(s) | 262, 454 |
| MlyI | GAGTC | 4 cut(s) | 322, 1103, 1217, 1289 |
| MmeI | TCCRAC | 3 cut(s) | 678, 929, 1282 |
| Mox20I | TGGCCA | 2 cut(s) | 262, 454 |
| Mph1103I | ATGCAT | 1 cut(s) | 1132 |
| MscI | TGGCCA | 2 cut(s) | 262, 454 |
| MslI | CAYNNNNRTG | 2 cut(s) | 315, 3451 |
| Msp20I | TGGCCA | 2 cut(s) | 262, 454 |
| MspA1I | CMGCKG | 2 cut(s) | 373, 1594 |
| MspCI | CTTAAG | 2 cut(s) | 1028, 1045 |
| MspI | CCGG | 1 cut(s) | 3211 |
| MspR9I | CCNGG | 3 cut(s) | 610, 2034, 2076 |
| MunI | CAATTG | 1 cut(s) | 2408 |
| Mva1269I | GAATGC | 2 cut(s) | 52, 272 |
| MvaI | CCWGG | 3 cut(s) | 610, 2034, 2076 |
| MvnI | CGCG | 1 cut(s) | 3514 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 219, 1033, 1591, 1817, 2015, 2336, 2495, 2959, 3233 |
| NdeII | GATC | 8 cut(s) | 721, 1209, 1928, 2463, 2524, 2977, 3129, 3442 |
| NheI | GCTAGC | 1 cut(s) | 284 |
| NlaIII | CATG | 7 cut(s) | 25, 607, 1164, 1365, 2389, 3574, 3633 |
| NlaIV | GGNNCC | 7 cut(s) | 723, 1551, 1761, 2046, 2088, 2649, 3444 |
| NmuCI | GTSAC | 4 cut(s) | 378, 1554, 3375, 3469 |
| NruI | TCGCGA | 1 cut(s) | 3514 |
| NsiI | ATGCAT | 1 cut(s) | 1132 |
| NspI | RCATGY | 1 cut(s) | 1164 |
| NspV | TTCGAA | 1 cut(s) | 625 |
| PaeR7I | CTCGAG | 1 cut(s) | 2835 |
| PaqCI | CACCTGC | 1 cut(s) | 1111 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 631 |
| PctI | GAATGC | 2 cut(s) | 52, 272 |
| PflFI | GACNNNGTC | 1 cut(s) | 1226 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 2033, 2075, 2120 |
| PleI | GAGTC | 4 cut(s) | 322, 1103, 1217, 1288 |
| PpsI | GAGTC | 4 cut(s) | 322, 1103, 1217, 1288 |
| PshBI | ATTAAT | 1 cut(s) | 2484 |
| Psp124BI | GAGCTC | 1 cut(s) | 904 |
| Psp1406I | AACGTT | 1 cut(s) | 1379 |
| Psp6I | CCWGG | 3 cut(s) | 608, 2032, 2074 |
| PspFI | CCCAGC | 1 cut(s) | 2608 |
| PspGI | CCWGG | 3 cut(s) | 608, 2032, 2074 |
| PspN4I | GGNNCC | 7 cut(s) | 723, 1551, 1761, 2046, 2088, 2649, 3444 |
| PspOMI | GGGCCC | 2 cut(s) | 2044, 2086 |
| PspPI | GGNCC | 9 cut(s) | 1304, 1466, 1631, 2044, 2045, 2086, 2087, 2144, 2378 |
| PspXI | VCTCGAGB | 1 cut(s) | 2835 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1432, 1451, 2336 |
| PsuI | RGATCY | 5 cut(s) | 721, 1928, 2463, 2977, 3442 |
| PsyI | GACNNNGTC | 1 cut(s) | 1226 |
| PvuII | CAGCTG | 1 cut(s) | 373 |
| RruI | TCGCGA | 1 cut(s) | 3514 |
| RsaI | GTAC | 4 cut(s) | 342, 1311, 1732, 3392 |
| RsaNI | GTAC | 4 cut(s) | 341, 1310, 1731, 3391 |
| RseI | CAYNNNNRTG | 2 cut(s) | 315, 3451 |
| SacI | GAGCTC | 1 cut(s) | 904 |
| SalI | GTCGAC | 1 cut(s) | 2414 |
| Sau3AI | GATC | 8 cut(s) | 721, 1209, 1928, 2463, 2524, 2977, 3129, 3442 |
| Sau96I | GGNCC | 9 cut(s) | 1304, 1466, 1631, 2044, 2045, 2086, 2087, 2144, 2378 |
| SchI | GAGTC | 4 cut(s) | 322, 1103, 1217, 1289 |
| ScrFI | CCNGG | 3 cut(s) | 610, 2034, 2076 |
| SduI | GDGCHC | 6 cut(s) | 472, 904, 2048, 2056, 2090, 2098 |
| SfaNI | GCATC | 9 cut(s) | 780, 894, 1000, 1042, 1139, 1415, 1444, 3236, 3601 |
| SfcI | CTRYAG | 1 cut(s) | 3585 |
| Sfr274I | CTCGAG | 1 cut(s) | 2835 |
| SfuI | TTCGAA | 1 cut(s) | 625 |
| SinI | GGWCC | 2 cut(s) | 1304, 2144 |
| SlaI | CTCGAG | 1 cut(s) | 2835 |
| SmiI | ATTTAAAT | 1 cut(s) | 2857 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 315, 3451 |
| SmlI | CTYRAG | 3 cut(s) | 1028, 1045, 2835 |
| SmoI | CTYRAG | 3 cut(s) | 1028, 1045, 2835 |
| SpeI | ACTAGT | 1 cut(s) | 1541 |
| SspMI | CTAG | 9 cut(s) | 285, 960, 1134, 1542, 1623, 2049, 2091, 2700, 2751 |
| SstI | GAGCTC | 1 cut(s) | 904 |
| StyD4I | CCNGG | 3 cut(s) | 608, 2032, 2074 |
| StyI | CCWWGG | 1 cut(s) | 1176 |
| SwaI | ATTTAAAT | 1 cut(s) | 2857 |
| TaiI | ACGT | 3 cut(s) | 81, 426, 1382 |
| TaqI | TCGA | 8 cut(s) | 496, 584, 625, 1212, 1375, 2282, 2415, 2836 |
| TatI | WGTACW | 4 cut(s) | 340, 1309, 1730, 3390 |
| TauI | GCSGC | 4 cut(s) | 1588, 1783, 2065, 2104 |
| TscAI | CASTG | 9 cut(s) | 270, 677, 769, 1144, 1569, 1761, 2219, 2505, 2836 |
| TseFI | GTSAC | 4 cut(s) | 378, 1554, 3375, 3469 |
| Tsp45I | GTSAC | 4 cut(s) | 378, 1554, 3375, 3469 |
| TspGWI | ACGGA | 3 cut(s) | 737, 1542, 3149 |
| TspRI | CASTG | 9 cut(s) | 270, 677, 769, 1144, 1569, 1761, 2219, 2505, 2836 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1226 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 2033, 2075, 2120 |
| Vha464I | CTTAAG | 2 cut(s) | 1028, 1045 |
| VneI | GTGCAC | 2 cut(s) | 2052, 2094 |
| VpaK11BI | GGWCC | 2 cut(s) | 1304, 2144 |
| VspI | ATTAAT | 1 cut(s) | 2484 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 569 |
| XapI | RAATTY | 3 cut(s) | 28, 796, 2194 |
| XbaI | TCTAGA | 1 cut(s) | 1622 |
| XceI | RCATGY | 1 cut(s) | 1164 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2566 |
| XhoI | CTCGAG | 1 cut(s) | 2835 |
| XmiI | GTMKAC | 2 cut(s) | 2371, 2415 |
| XspI | CTAG | 9 cut(s) | 285, 960, 1134, 1542, 1623, 2049, 2091, 2700, 2751 |
| Zsp2I | ATGCAT | 1 cut(s) | 1132 |