Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0015312

Physical Location & Seq

Genomic Coordinates Reverse (-)

18489451 .. 18492843

Gene Structure 3393 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g27210.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3393 bp

ATGCAGAAGACTAATCCACTTCAGCTTTTTCTTCATCTTTCACTGATCATACTTGTTTCCACAGCTGAACAAGTCGTTCCTTCAATCAAAACCGATGCCGAGTCGCTTCTGAAGTTCAAACAGATGATTGACAAGGACCCGAATGGAGTCTTATCAGGTTGGCAGCTTGGTAAGAATCCATGCACCTGGTTTGGAATCACATGCACTGCAGGCAGAGCAACTCAGCTCAATCTCAACGGTGGTTCACTAGTTGGGACAATCTCTCTCGACCCTTTCTCTTCTCTTGATAGGCTCTCTGTCTTGAAACTCTCTGCCAACTCGTTCAATGTAAATTCCACTTCTTTGCTTCAGCTTCCAAATAGTCTCAAACAGCTTGATCTGTCCTTCACCGGAATCTCCGGTGTTGTCCCTGAGAGCCTTTTCTCAAGGTGTCCCAATCTCGAAGTGGTAAATCTTGGTTTCAACAATTTAACAGGTCCTTTGCCTAAGGACTTGTTGTTGAACTCTGATAAACTACAAGCTCTAGACTTGTCTTATAACAACCTAACCGGGTTCATGTCCGGTTTCAAAATCGACAAATATTCTTGTTCTTCATTAGCTCAGCTTGATTTCTCAGGAAACCGCATCAATGGTTCTCTTCCTATGTCCTTGTCGAACTGCACTGCTCTCAAAACCATAAACTTAGCATATAATATGCTTTCTGGGGAAATCCCAAGATCTTTTGGGCAACTCAGCAGTCTACAAAGACTGGACCTTTCTCACAATCAAATCACAGGTTGGATCCCTCCTGAACTAGGAAATGCATGCAACTCACTTCTAGAGCTTAAGCTTTCATACAACAACTTCACTGGCCCAATCCCATCAGCTTTCTCCTCTTGTTCTTGGCTCCAACTTCTTGATCTTTCCAACAACAACATATCAGGCCCCTTGCCAGATTCTCTCTTCCAGAATCTAACCTCCTTGGAGAGCTTGCTTTTGAGTAACAACATCATATCTGGATCTTTTCCGGGTTCCATTTCAGCTTGCAAAAGCCTGCAGGTTTTAGACTTGAGCTCTAACAAAATATCTGGTGTGATCCCGGCTGATTTATGTCCTGGAGCTGCTTCACTTCAGGAGCTGAGGATGCCGGATAACCTTATCATAGGAGAAATCCCTGCTCAACTTTCGCAATGTTCGCAGCTCAAGACTATTGATCTGAGCTTGAACTATCTCAACGGTTCGATTCCTGCTGAGCTTGGGAAGCTGGAGAACCTGCAGCAGCTGATAGCATGGTACAATGGCTTGGAGGGGAAAATCCCACCAGACTTGGGAAAGTGCAAGAATCTCAAGGATCTCATTCTCAATAATAACCGCCTCATCGGAGAAATCCCCACTGAATTGTTCAGTTGCAGTAATCTTGAGTGGATATCATTGACAAGCAATAGAATCAGTGGCGAAATCCCAAGGGAGTTTGGTGTCTTGACAAGGCTGGCTGTCCTGCAACTTGGGAATAATAGCCTGAGTGGGCAGATACCAGGAGAGTTGGCAAATTGTAGCAGTTTGGTTTGGTTGGATTTGAACAGCAACAGGCTAACTGGAGAAATCCCAGCAAGACTAGGAAGACAGCTCGGCGCGGAATCATTGAGTGGAATTCTGTCTGGCAACACTTTGGTGTTCGTTCGCAATGTGGGGAATTCATGTAAAGGTGTAGGAGGTTTGTTAGAGTTCGCTGGAATCAGACCTGAAAGGCTTTTGCAGGATCCAACTCTTAAGACTTGTGATTTCACCAGATTGTACTCTGGCCCTGTCCTCAGTCTGTTTACAAAGTACCAAACACTTGAATATCTTGATCTTTCTTATAATCAGCTCCGGGGGAAAATCCCAGAGGAATTCGGAGAAATGATTGCGCTGCAAGTTCTTGAGTTAGCTCACAACCAGTTATCAGGTGAGATTCCTGCATCGCTTGGCCAGCTTAAAAATTTAGGTGTGTTTGATGCATCACATAACAGACTGCAGGGTCATATCCCAGATTCATTCTCCAACTTATCATTTTTGGTTCAAATTGATTTGTCCTACAATGAATTGACTGGGGAGATCCCCACAAGGGGACAGCTGAGTACACTTCCTGCTACCCAATATGCTAACAATCCAGGACTTTGTGGGGTACCATTGCCAGAGTGTTCAAGCAGCAATAACCAACCAAGCATCACTCCAAGTGATGAGGATGCAGGCAAAGCAAGTCGAAAATCATCAGTTGCTTCATGGGCCAATAGCATTGTTGTGGGGATTTTTGTTTCTGTTGCTTCAGTGTGTGTTCTGATTGTGTGGGGTATTGCAATGCGTTCAAGGCGGAAGGAAGCGCAAGAGGTGAAGATGCTTAACCGCTTGCAGGCATCTCGTGCAGCAACCACATGGAAAATTGACAAAGAGAAAGAACCATTGAGCATCAACGTTGCTACTTTTCAGAGACAACTAAGGAAGCTCAAGTTCTCCCAACTCATTGAGGCAACCAATGGTTTCTCGGCAGATAGTCTTATAGGTTCTGGAGGTTTTGGAGAAGTGTTCAAGGCGACACTGAAGGATGGTTCGAGTGTTGCAATCAAGAAACTCATACGATTGAGTTGCCAAGGTGACCGCGAATTCATGGCGGAGATGGAAACTCTTGGAAAGATTAAGCATAGAAATCTTGTGCCATTATTGGGCTACTGCAAAATCGGTGAAGAGAGGCTGCTAGTCTATGAGTTCATGGAGTATGGAAGCCTCGAAGAAATGCTGCATGGGAGAACAAGGACGCGCGACAAAAAGATCCTATCATGGGAGGAAAGGAAAAAAATTGCAAGAGGTGCAGCTAAAGGATTGTGTTTCCTTCACCACAATTGCATCCCTCACATCATACACAGAGACATGAAGTCGAGCAACGTATTGTTGGACAATGAAATGGAAGCAAGAGTTTCGGATTTTGGAATGGCAAGGCTCATAAGTGCACTTGATACACACTTGAGTGTAAGCACATTAGCAGGCACCCCTGGCTATGTTCCACCAGAATACTACCAAAGTTTCCGGTGCACTGCAAAAGGCGATGTTTATTCATTTGGGGTTGTCCTATTGGAGCTTGTGACAGGAAAGCGCCCAACAGACAAGGAGGACTTTGGAGATACTAATCTAGTTGGATGGGCGAAAATGAAAGTGAGAGAAGGGAAACAGATGGAAGTGATAGACCAGGAATTAGTTTCGGCAGCCAAAGGAAGTGACCAAGCAGAAGCCGAAGAAGTGAAAGAGATGGTGAGGTATTTGGAAGTAACACTTCGGTGTGTTGATGATTTCCCTTCCAGAAGGCCAAACATGTTGCAGGTGGTGGCCTTGCTCCGCGAGCTGATGCCCGAATCAGCAAGTGGAAGCAGCAACAGCGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009741 GO:0009742 GO:0009755 GO:0009987 GO:0010033 GO:0010051 GO:0010232 GO:0010233 GO:0010305 GO:0014070 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0036211 GO:0038023 GO:0042221 GO:0043170 GO:0043401 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0048545 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0060089 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

1131

Amino Acids

123.49

Weight (kDa)

6.28

Isoelectric Point (pI)

32.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	30 - 69	9.8e-11	Leucine rich repeat N-terminal domain
LRR_8	PF13855	121 - 182	4e-06	Leucine rich repeat
LRR_8	PF13855	198 - 257	4.8e-09	Leucine rich repeat
LRR_14	PF23598	289 - 423	8.6e-06	Leucine-rich repeat region
LRR_8	PF13855	310 - 355	1.1e-07	Leucine rich repeat
LRR_4	PF12799	319 - 356	5.3e-06	Leucine Rich repeats (2 copies)
LRR_8	PF13855	441 - 500	1.2e-07	Leucine rich repeat
Island	PF20141	542 - 601	3.9e-19	Brassinosteroid receptor island domain
LRR_14	PF23598	597 - 683	4.2e-06	Leucine-rich repeat region
LRR_8	PF13855	599 - 640	4.5e-06	Leucine rich repeat
Pkinase	PF00069	835 - 1046	3.4e-43	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	836 - 1113	7.2e-44	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0015312)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G01950
fragaria_vesca	FvH4_5g27210
malus_domestica	MD13G1014800.v1.1
prunus_persica	Prupe.1G338800_v2.0.a1
pyrus_communis	pycom13g01260 pycom16g01160
rosa_chinensis	RchiOBHm_Chr7g0218311
rosa_laevigata	RLG00000002379
rosa_multiflora	Rmu_sc0009526.1_g000007
rosa_roxburghii	Rroxscaffold_3G00241060
rosa_rugosa	Rorug07G0176700
rosa_samantha	Rh7AG318000 Rh7BG309700 Rh7CG334800 Rh7DG317000
rosa_wichuraiana	Rw7G027020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	537, 1839
AarI	CACCTGC	1 cut(s)	3319
AasI	GACNNNNNNGTC	1 cut(s)	1995
Acc36I	ACCTGC	3 cut(s)	1027, 1260, 3319
Acc65I	GGTACC	1 cut(s)	2143
AccB1I	GGYRCC	2 cut(s)	2143, 2999
AccI	GTMKAC	1 cut(s)	739
AccII	CGCG	5 cut(s)	1613, 2616, 2773, 2775, 3348
AciI	CCGC	8 cut(s)	622, 1351, 1613, 2329, 2362, 2614, 2627, 3346
AclI	AACGTT	1 cut(s)	2430
AclWI	GGATC	9 cut(s)	775, 788, 1006, 1069, 1338, 1733, 1746, 2068, 2779
AcoI	YGGCCR	1 cut(s)	1945
AcsI	RAATTY	6 cut(s)	331, 1629, 1672, 1868, 1957, 2618
AcuI	CTGAAG	6 cut(s)	5, 131, 332, 1094, 2268, 2576
AfaI	GTAC	5 cut(s)	1274, 1775, 1808, 2098, 2145
AfeI	AGCGCT	1 cut(s)	3388
AfiI	CCNNNNNNNGG	7 cut(s)	794, 1307, 2083, 2084, 2368, 2678, 2794
AflII	CTTAAG	2 cut(s)	824, 1748
AflIII	ACRYGT	1 cut(s)	3321
AhdI	GACNNNNNGTC	1 cut(s)	2887
AhlI	ACTAGT	1 cut(s)	247
AjnI	CCWGG	6 cut(s)	185, 1093, 1513, 2128, 3004, 3198
AleI	CACNNNNGTG	3 cut(s)	1649, 2979, 3286
Alw21I	GWGCWC	3 cut(s)	1055, 2965, 3047
Alw26I	GTCTC	3 cut(s)	368, 2440, 2874
Alw44I	GTGCAC	2 cut(s)	2961, 3043
AlwI	GGATC	9 cut(s)	775, 788, 1006, 1069, 1338, 1733, 1746, 2068, 2779
AlwNI	CAGNNNCTG	2 cut(s)	1117, 1261
Aor51HI	AGCGCT	1 cut(s)	3388
AoxI	GGCC	7 cut(s)	850, 922, 1780, 1945, 2244, 3314, 3336
ApaLI	GTGCAC	2 cut(s)	2961, 3043
ApoI	RAATTY	6 cut(s)	331, 1629, 1672, 1868, 1957, 2618
Asp718I	GGTACC	1 cut(s)	2143
AspLEI	GCGC	6 cut(s)	1613, 1888, 2341, 2775, 3108, 3389
AspS9I	GGNCC	7 cut(s)	136, 476, 751, 851, 923, 1781, 2244
AsuC2I	CCSGG	4 cut(s)	550, 1008, 1079, 1850
AsuHPI	GGTGA	8 cut(s)	379, 1756, 1937, 2359, 2621, 2708, 2840, 3274
AvaII	GGWCC	3 cut(s)	136, 476, 751
AxyI	CCTNAGG	1 cut(s)	486
BaeGI	GKGCMC	2 cut(s)	2965, 3047
BalI	TGGCCA	1 cut(s)	1947
BamHI	GGATCC	2 cut(s)	780, 1738
BanI	GGYRCC	2 cut(s)	2143, 2999
BanII	GRGCYC	1 cut(s)	1055
BauI	CACGAG	1 cut(s)	2376
BbsI	GAAGAC	2 cut(s)	14, 1606
Bbv12I	GWGCWC	3 cut(s)	1055, 2965, 3047
BbvCI	CCTCAGC	1 cut(s)	1118
BccI	CCATC	6 cut(s)	868, 2555, 2626, 3144, 3178, 3253
BcgI	CGANNNNNNTGC	6 cut(s)	2357, 2391, 2583, 2617, 2913, 2947
BciT130I	CCWGG	6 cut(s)	187, 1095, 1515, 2130, 3006, 3200
BclI	TGATCA	1 cut(s)	45
BcnI	CCSGG	4 cut(s)	550, 1008, 1079, 1850
BcoDI	GTCTC	3 cut(s)	368, 2440, 2874
BcuI	ACTAGT	1 cut(s)	247
BfaI	CTAG	7 cut(s)	248, 524, 794, 818, 1595, 2711, 3143
BfmI	CTRYAG	4 cut(s)	207, 1034, 1253, 1991
BfoI	RGCGCY	2 cut(s)	3109, 3390
BfrI	CTTAAG	2 cut(s)	824, 1748
BfuAI	ACCTGC	3 cut(s)	1027, 1260, 3319
BglII	AGATCT	1 cut(s)	716
BlpI	GCTNAGC	2 cut(s)	600, 1230
Bme18I	GGWCC	3 cut(s)	136, 476, 751
BmeRI	GACNNNNNGTC	1 cut(s)	2887
BmgT120I	GGNCC	7 cut(s)	136, 476, 751, 851, 923, 1781, 2244
BmiI	GGNNCC	8 cut(s)	138, 782, 887, 925, 1012, 1740, 2145, 3001
BmrI	ACTGGG	1 cut(s)	2076
BmuI	ACTGGG	1 cut(s)	2076
BpiI	GAAGAC	2 cut(s)	14, 1606
BpmI	CTGGAG	4 cut(s)	1116, 1265, 1596, 2544
Bpu10I	CCTNAGC	1 cut(s)	1118
Bpu1102I	GCTNAGC	2 cut(s)	600, 1230
BpuEI	CTTGAG	8 cut(s)	409, 1069, 1166, 1310, 1418, 1919, 2447, 2998
BpuMI	CCSGG	4 cut(s)	550, 1008, 1079, 1850
BsaBI	GATNNNNATC	1 cut(s)	3138
BsaJI	CCNNGG	5 cut(s)	960, 1442, 1849, 2605, 3004
BsaWI	WCCGGW	4 cut(s)	389, 398, 560, 3039
Bsc4I	CCNNNNNNNGG	7 cut(s)	794, 1307, 2083, 2084, 2368, 2678, 2794
Bse1I	ACTGG	5 cut(s)	753, 853, 1579, 1915, 2071
Bse21I	CCTNAGG	1 cut(s)	486
Bse3DI	GCAATG	4 cut(s)	1175, 1669, 2147, 2322
Bse8I	GATNNNNATC	1 cut(s)	3138
BseBI	CCWGG	6 cut(s)	187, 1095, 1515, 2130, 3006, 3200
BseDI	CCNNGG	5 cut(s)	960, 1442, 1849, 2605, 3004
BseGI	GGATG	5 cut(s)	1128, 2209, 2566, 2859, 3155
BseJI	GATNNNNATC	1 cut(s)	3138
BseLI	CCNNNNNNNGG	7 cut(s)	794, 1307, 2083, 2084, 2368, 2678, 2794
BseMI	GCAATG	4 cut(s)	1175, 1669, 2147, 2322
BseNI	ACTGG	5 cut(s)	753, 853, 1579, 1915, 2071
BseRI	GAGGAG	1 cut(s)	862
BseSI	GKGCMC	2 cut(s)	2965, 3047
BseYI	CCCAGC	1 cut(s)	1585
BsgI	GTGCAG	3 cut(s)	643, 2400, 2844
Bsh1236I	CGCG	5 cut(s)	1613, 2616, 2773, 2775, 3348
BshFI	GGCC	7 cut(s)	852, 924, 1782, 1947, 2246, 3316, 3338
BshNI	GGYRCC	2 cut(s)	2143, 2999
BsiHKAI	GWGCWC	3 cut(s)	1055, 2965, 3047
BsiSI	CCGG	9 cut(s)	390, 399, 549, 561, 1007, 1079, 1127, 1849, 3040
BslFI	GGGAC	4 cut(s)	268, 392, 417, 2100
BslI	CCNNNNNNNGG	7 cut(s)	794, 1307, 2083, 2084, 2368, 2678, 2794
BsmAI	GTCTC	3 cut(s)	368, 2440, 2874
BsmFI	GGGAC	4 cut(s)	268, 392, 417, 2100
BsnI	GGCC	7 cut(s)	852, 924, 1782, 1947, 2246, 3316, 3338
Bsp1286I	GDGCHC	3 cut(s)	1055, 2965, 3047
Bsp1720I	GCTNAGC	2 cut(s)	600, 1230
BspACI	CCGC	8 cut(s)	622, 1351, 1613, 2329, 2362, 2614, 2627, 3346
BspANI	GGCC	7 cut(s)	852, 924, 1782, 1947, 2246, 3316, 3338
BspFNI	CGCG	5 cut(s)	1613, 2616, 2773, 2775, 3348
BspLI	GGNNCC	8 cut(s)	138, 782, 887, 925, 1012, 1740, 2145, 3001
BspMAI	CTGCAG	4 cut(s)	211, 1038, 1257, 1995
BspMI	ACCTGC	3 cut(s)	1027, 1260, 3319
BspPI	GGATC	9 cut(s)	775, 788, 1006, 1069, 1338, 1733, 1746, 2068, 2779
BspT107I	GGYRCC	2 cut(s)	2143, 2999
BspTI	CTTAAG	2 cut(s)	824, 1748
BsrDI	GCAATG	4 cut(s)	1175, 1669, 2147, 2322
BsrI	ACTGG	5 cut(s)	753, 853, 1579, 1915, 2071
BssECI	CCNNGG	5 cut(s)	960, 1442, 1849, 2605, 3004
BssSI	CACGAG	1 cut(s)	2376
BssT1I	CCWWGG	3 cut(s)	960, 1442, 2605
Bst2BI	CACGAG	1 cut(s)	2376
Bst2UI	CCWGG	6 cut(s)	187, 1095, 1515, 2130, 3006, 3200
Bst4CI	ACNGT	2 cut(s)	239, 1217
Bst6I	CTCTTC	4 cut(s)	283, 642, 947, 2694
BstAFI	CTTAAG	2 cut(s)	824, 1748
BstAPI	GCANNNNNTGC	2 cut(s)	2378, 2822
BstEII	GGTNACC	1 cut(s)	2609
BstENI	CCTNNNNNAGG	1 cut(s)	792
BstF5I	GGATG	5 cut(s)	1128, 2209, 2566, 2859, 3155
BstFNI	CGCG	5 cut(s)	1613, 2616, 2773, 2775, 3348
BstH2I	RGCGCY	2 cut(s)	3109, 3390
BstHHI	GCGC	6 cut(s)	1613, 1888, 2341, 2775, 3108, 3389
BstMAI	GTCTC	3 cut(s)	368, 2440, 2874
BstNI	CCWGG	6 cut(s)	187, 1095, 1515, 2130, 3006, 3200
BstNSI	RCATGY	3 cut(s)	204, 807, 3325
BstPI	GGTNACC	1 cut(s)	2609
BstSFI	CTRYAG	4 cut(s)	207, 1034, 1253, 1991
BstSLI	GKGCMC	2 cut(s)	2965, 3047
BstUI	CGCG	5 cut(s)	1613, 2616, 2773, 2775, 3348
BstV2I	GAAGAC	2 cut(s)	14, 1606
BstX2I	RGATCY	7 cut(s)	716, 780, 998, 1330, 1738, 2073, 2784
BstXI	CCANNNNNNTGG	1 cut(s)	186
BstYI	RGATCY	7 cut(s)	716, 780, 998, 1330, 1738, 2073, 2784
Bsu36I	CCTNAGG	1 cut(s)	486
BsuRI	GGCC	7 cut(s)	852, 924, 1782, 1947, 2246, 3316, 3338
BtgZI	GCGATG	2 cut(s)	1923, 3072
BtsCI	GGATG	5 cut(s)	1128, 2209, 2566, 2859, 3155
BtsI	GCAGTG	3 cut(s)	204, 660, 3045
BtsIMutI	CAGTG	9 cut(s)	41, 204, 660, 846, 1371, 1435, 2292, 2552, 3045
BveI	ACCTGC	3 cut(s)	1027, 1260, 3319
CaiI	CAGNNNCTG	2 cut(s)	1117, 1261
CfoI	GCGC	6 cut(s)	1613, 1888, 2341, 2775, 3108, 3389
Cfr13I	GGNCC	7 cut(s)	136, 476, 751, 851, 923, 1781, 2244
CseI	GACGC	1 cut(s)	2779
CsiI	ACCWGGT	1 cut(s)	185
Csp6I	GTAC	5 cut(s)	1273, 1774, 1807, 2097, 2144
CspCI	CAANNNNNGTGG	2 cut(s)	1287, 1322
CviQI	GTAC	5 cut(s)	1273, 1774, 1807, 2097, 2144
DrdI	GACNNNNNNGTC	1 cut(s)	1995
DriI	GACNNNNNGTC	1 cut(s)	2887
DseDI	GACNNNNNNGTC	1 cut(s)	1995
EaeI	YGGCCR	1 cut(s)	1945
Eam1104I	CTCTTC	4 cut(s)	283, 642, 947, 2694
Eam1105I	GACNNNNNGTC	1 cut(s)	2887
EarI	CTCTTC	4 cut(s)	283, 642, 947, 2694
EciI	GGCGGA	2 cut(s)	2344, 2642
Ecl136II	GAGCTC	1 cut(s)	1053
Eco130I	CCWWGG	3 cut(s)	960, 1442, 2605
Eco24I	GRGCYC	1 cut(s)	1055
Eco32I	GATATC	1 cut(s)	1407
Eco47I	GGWCC	3 cut(s)	136, 476, 751
Eco47III	AGCGCT	1 cut(s)	3388
Eco53kI	GAGCTC	1 cut(s)	1053
Eco57I	CTGAAG	6 cut(s)	5, 131, 332, 1094, 2268, 2576
Eco81I	CCTNAGG	1 cut(s)	486
Eco91I	GGTNACC	1 cut(s)	2609
EcoICRI	GAGCTC	1 cut(s)	1053
EcoNI	CCTNNNNNAGG	1 cut(s)	792
EcoO109I	RGGNCCY	3 cut(s)	136, 476, 923
EcoO65I	GGTNACC	1 cut(s)	2609
EcoRI	GAATTC	4 cut(s)	1629, 1672, 1868, 2618
EcoRII	CCWGG	6 cut(s)	185, 1093, 1513, 2128, 3004, 3198
EcoRV	GATATC	1 cut(s)	1407
EcoT14I	CCWWGG	3 cut(s)	960, 1442, 2605
EcoT22I	ATGCAT	2 cut(s)	805, 1978
EcoT38I	GRGCYC	1 cut(s)	1055
ErhI	CCWWGG	3 cut(s)	960, 1442, 2605
FalI	AAGNNNNNCTT	4 cut(s)	3110, 3142, 3267, 3299
FaqI	GGGAC	4 cut(s)	268, 392, 417, 2100
FbaI	TGATCA	1 cut(s)	45
FblI	GTMKAC	1 cut(s)	739
FokI	GGATG	5 cut(s)	1135, 2216, 2573, 2846, 3162
FriOI	GRGCYC	1 cut(s)	1055
FspBI	CTAG	7 cut(s)	248, 524, 794, 818, 1595, 2711, 3143
GlaI	GCGC	6 cut(s)	1612, 1887, 2340, 2774, 3107, 3388
GsaI	CCCAGC	1 cut(s)	1589
GsuI	CTGGAG	4 cut(s)	1116, 1265, 1596, 2544
HaeII	RGCGCY	2 cut(s)	3109, 3390
HaeIII	GGCC	7 cut(s)	852, 924, 1782, 1947, 2246, 3316, 3338
HapII	CCGG	9 cut(s)	390, 399, 549, 561, 1007, 1079, 1127, 1849, 3040
HgaI	GACGC	1 cut(s)	2779
HhaI	GCGC	6 cut(s)	1613, 1888, 2341, 2775, 3108, 3389
Hin6I	GCGC	6 cut(s)	1611, 1886, 2339, 2773, 3106, 3387
HinP1I	GCGC	6 cut(s)	1611, 1886, 2339, 2773, 3106, 3387
HindIII	AAGCTT	1 cut(s)	827
HpaII	CCGG	9 cut(s)	390, 399, 549, 561, 1007, 1079, 1127, 1849, 3040
HphI	GGTGA	8 cut(s)	379, 1756, 1937, 2359, 2621, 2708, 2840, 3274
Hpy166II	GTNNAC	6 cut(s)	245, 740, 1800, 2099, 2963, 3045
Hpy188I	TCNGA	9 cut(s)	111, 508, 1197, 1361, 1718, 1874, 2298, 2445, 2935
Hpy8I	GTNNAC	6 cut(s)	245, 740, 1800, 2099, 2963, 3045
HpyAV	CCTTC	8 cut(s)	90, 394, 2326, 2551, 2855, 3167, 3306, 3315
HpyCH4III	ACNGT	2 cut(s)	239, 1217
HpyCH4IV	ACGT	2 cut(s)	2430, 2898
HpySE526I	ACGT	2 cut(s)	2430, 2898
HspAI	GCGC	6 cut(s)	1611, 1886, 2339, 2773, 3106, 3387
KpnI	GGTACC	1 cut(s)	2147
Ksp22I	TGATCA	1 cut(s)	45
LmnI	GCTCC	6 cut(s)	891, 1097, 1114, 1851, 3088, 3348
MabI	ACCWGGT	1 cut(s)	185
MaeI	CTAG	7 cut(s)	248, 524, 794, 818, 1595, 2711, 3143
MaeII	ACGT	2 cut(s)	2430, 2898
MaeIII	GTNAC	5 cut(s)	980, 2609, 3094, 3227, 3277
MfeI	CAATTG	1 cut(s)	2854
MflI	RGATCY	7 cut(s)	716, 780, 998, 1330, 1738, 2073, 2784
MhlI	GDGCHC	3 cut(s)	1055, 2965, 3047
MlsI	TGGCCA	1 cut(s)	1947
MluNI	TGGCCA	1 cut(s)	1947
MlyI	GAGTC	2 cut(s)	110, 156
MmeI	TCCRAC	8 cut(s)	758, 913, 930, 1530, 1766, 2043, 2886, 3127
Mox20I	TGGCCA	1 cut(s)	1947
Mph1103I	ATGCAT	2 cut(s)	805, 1978
MscI	TGGCCA	1 cut(s)	1947
MseI	TTAA	6 cut(s)	470, 825, 1749, 1953, 2358, 2652
MslI	CAYNNNNRTG	4 cut(s)	1649, 2258, 2979, 3286
Msp20I	TGGCCA	1 cut(s)	1947
MspA1I	CMGCKG	3 cut(s)	65, 1261, 2092
MspCI	CTTAAG	2 cut(s)	824, 1748
MspI	CCGG	9 cut(s)	390, 399, 549, 561, 1007, 1079, 1127, 1849, 3040
MunI	CAATTG	1 cut(s)	2854
MvaI	CCWGG	6 cut(s)	187, 1095, 1515, 2130, 3006, 3200
MvnI	CGCG	5 cut(s)	1613, 2616, 2773, 2775, 3348
NciI	CCSGG	4 cut(s)	550, 1008, 1079, 1850
NlaIV	GGNNCC	8 cut(s)	138, 782, 887, 925, 1012, 1740, 2145, 3001
NmeAIII	GCCGAG	3 cut(s)	124, 1587, 2480
NmuCI	GTSAC	3 cut(s)	2609, 3094, 3227
NsiI	ATGCAT	2 cut(s)	805, 1978
NspI	RCATGY	3 cut(s)	204, 807, 3325
OliI	CACNNNNGTG	3 cut(s)	1649, 2979, 3286
PaeI	GCATGC	1 cut(s)	807
PaqCI	CACCTGC	1 cut(s)	3319
PciI	ACATGT	1 cut(s)	3321
PfoI	TCCNGGA	2 cut(s)	1093, 2128
PleI	GAGTC	2 cut(s)	109, 155
PpsI	GAGTC	2 cut(s)	109, 155
PpuMI	RGGWCCY	2 cut(s)	136, 476
PscI	ACATGT	1 cut(s)	3321
PsiI	TTATAA	2 cut(s)	537, 1839
Psp124BI	GAGCTC	1 cut(s)	1055
Psp1406I	AACGTT	1 cut(s)	2430
Psp5II	RGGWCCY	2 cut(s)	136, 476
Psp6I	CCWGG	6 cut(s)	185, 1093, 1513, 2128, 3004, 3198
PspEI	GGTNACC	1 cut(s)	2609
PspFI	CCCAGC	1 cut(s)	1585
PspGI	CCWGG	6 cut(s)	185, 1093, 1513, 2128, 3004, 3198
PspN4I	GGNNCC	8 cut(s)	138, 782, 887, 925, 1012, 1740, 2145, 3001
PspPI	GGNCC	7 cut(s)	136, 476, 751, 851, 923, 1781, 2244
PspPPI	RGGWCCY	2 cut(s)	136, 476
PstI	CTGCAG	4 cut(s)	211, 1038, 1257, 1995
PstNI	CAGNNNCTG	2 cut(s)	1117, 1261
PsuI	RGATCY	7 cut(s)	716, 780, 998, 1330, 1738, 2073, 2784
PvuII	CAGCTG	3 cut(s)	65, 1261, 2092
RsaI	GTAC	5 cut(s)	1274, 1775, 1808, 2098, 2145
RsaNI	GTAC	5 cut(s)	1273, 1774, 1807, 2097, 2144
RseI	CAYNNNNRTG	4 cut(s)	1649, 2258, 2979, 3286
SacI	GAGCTC	1 cut(s)	1055
SaqAI	TTAA	6 cut(s)	470, 825, 1749, 1953, 2358, 2652
Sau96I	GGNCC	7 cut(s)	136, 476, 751, 851, 923, 1781, 2244
SbfI	CCTGCAGG	1 cut(s)	1038
SchI	GAGTC	2 cut(s)	110, 156
SdaI	CCTGCAGG	1 cut(s)	1038
SduI	GDGCHC	3 cut(s)	1055, 2965, 3047
SexAI	ACCWGGT	1 cut(s)	185
SfcI	CTRYAG	4 cut(s)	207, 1034, 1253, 1991
SinI	GGWCC	3 cut(s)	136, 476, 751
SmiMI	CAYNNNNRTG	4 cut(s)	1649, 2258, 2979, 3286
SpeI	ACTAGT	1 cut(s)	247
SphI	GCATGC	1 cut(s)	807
Sse8387I	CCTGCAGG	1 cut(s)	1038
SsiI	CCGC	8 cut(s)	622, 1351, 1613, 2329, 2362, 2614, 2627, 3346
SspI	AATATT	1 cut(s)	581
SspMI	CTAG	7 cut(s)	248, 524, 794, 818, 1595, 2711, 3143
SstI	GAGCTC	1 cut(s)	1055
StyI	CCWWGG	3 cut(s)	960, 1442, 2605
TaaI	ACNGT	2 cut(s)	239, 1217
TaiI	ACGT	2 cut(s)	2433, 2901
TaqI	TCGA	9 cut(s)	267, 441, 573, 653, 1220, 2221, 2567, 2742, 2891
TatI	WGTACW	2 cut(s)	1773, 2096
Tru1I	TTAA	6 cut(s)	470, 825, 1749, 1953, 2358, 2652
Tru9I	TTAA	6 cut(s)	470, 825, 1749, 1953, 2358, 2652
TscAI	CASTG	9 cut(s)	48, 211, 667, 853, 1378, 1435, 2292, 2559, 3052
TseFI	GTSAC	3 cut(s)	2609, 3094, 3227
Tsp45I	GTSAC	3 cut(s)	2609, 3094, 3227
TspRI	CASTG	9 cut(s)	48, 211, 667, 853, 1378, 1435, 2292, 2559, 3052
Vha464I	CTTAAG	2 cut(s)	824, 1748
VneI	GTGCAC	2 cut(s)	2961, 3043
VpaK11BI	GGWCC	3 cut(s)	136, 476, 751
XagI	CCTNNNNNAGG	1 cut(s)	792
XapI	RAATTY	6 cut(s)	331, 1629, 1672, 1868, 1957, 2618
XbaI	TCTAGA	2 cut(s)	523, 817
XceI	RCATGY	3 cut(s)	204, 807, 3325
XcmI	CCANNNNNNNNNTGG	1 cut(s)	442
XmiI	GTMKAC	1 cut(s)	739
XspI	CTAG	7 cut(s)	248, 524, 794, 818, 1595, 2711, 3143
Zsp2I	ATGCAT	2 cut(s)	805, 1978

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.