FvH4_6g03950
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Reverse (-)
2126477 .. 2130952
4476 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g03950.t1

Sequence Viewer

Length: 1899 bp
ATGTTCATTTCTACTGAAAATGAACAGATCTCAGTTCATTTCAACAATGGGTGCTTAGGATCACCTCCCATGGAATCAAACCCGGATTCCATTGATGGGTTGCCGGCTGTTTCTTATTCCAATGATGTCAATGTCGTCCCGGAGCATGAAAAGAATCAGCTTCAGCAGACAGTGTGCAATCTTGAAGGAGAAATTGCACAGTTGAAGCTGAAGCAGAAACTATGGGATGAGAAGAGGAGAGAAGCTTTGAATAAGATCATAGACATCAAAGGCAGTATTCGAGTCTTTTGTCGAGTTAGACCATTCCTAGTGATCAACAAGAGAAGAATCCGCGAACCCATTTCAGCTGGATCAGAGACGATTGTGGTAAAGTCTTCTGGAGCAAGAAAAGAATTTGAGTTTGACAAGGTTTTTCCCCAAGAAACAAGCCAAGAAGATGTATTTGCTGAGGTGGAACCAATTATCAGATCTGCACTTGATGGTCACAATGTGTGTGTTTTTGCTCATGGTCAAACTGGCACTGGCAAGACATTTACCATGGATGGCACAAATGAGGAGCCAGGAATCATTCCTAGAGCTCTCAGAGAGATCTTTAGTCAAGCCTCATTGGATAGCTCATCTTCTTTATCGTTTTCGATGAGCATGTTGGAAGTTTACATGGGCAATCTTAGGGATCTTCTATCCCCAAAAGCAGCCACTAGGCCACATGAAGCTGTAACAAGATGCAATCTCAGTATTCAAACAGACACCAAGGGGTTCATAGAAATCGAGGGTCTTACAGAAGTGCCGGTTCTTGATTTTGCTAAAGCTAGATGGTGGTATAATCGGGGGAAGCGAGTTAGATCTACTGCTTGGACTAATGTGAATGAGGCATCTAGCAGGTCTCACTGCTTAACGAGGATAACCATATTCCGACATGGAGATGCTTTGAAAGCCAAAAGGGAAGTGAGCAAACTGTGGTTGGTTGATCTTGGTGGAAGCGAAAGATTGCTTAAAACAGGAGCAACTGGACTAACACTTGATGAGGGAAGGGCCATAAATCTTTCTCTCTCAGCTTTGGGGGATGTTATTGCTGCTCTAAGAAGGAAACGAGGCCATGTGCCTTACAGGAATAGCAAACTCACACAGATCCTTAAAGATTCCTTAGGTCATGGTTCGAAAGTTTTGATGCTTGTTCATGTCAGCCCATGTGAACAAGATGTTGCTGAGACAATCTGTTCTTTGAGCTTTGCGAAGAGGGCAAGGGCTATAGAGAATAACAGGGAAATATCAGAGGACCTGAAGAAGCAAAAGGAGAAAAGGACCAAGGAGCTTGAAAATGATATGAGAAAAGCCAAAGAAGAATGTCAGAAAGTTAAAAATCAAATACAGAAGGCTGAGTTACTGTTACATGTAAATATTAAGCACTTCTCAACCAGTTATGGACCTTCTGAAGTTGAGGAGGTCCCCATTAGTCCCAAAGAAGTTGTGAAGGAAGTCATAGAAACACCTAGAAAGCGTGAGAAAGCAAGTAGAGGAACTGCTGCTAATTCTTTGCCTCGGTTCATGACTTCCACTGCAGCCAGTCGACATAGACAAACTGCTGCAGAAAGACAAATTGTTGGCAAAGCAAGAAGCTTGAGATCATATGTCACCAAAAGCTCAATTCAATTCTCGGCTTCACAATCAATGAGTTACTCCTCGGATGCTCGTTTCAGAACCATCTTGCAAAACTCAAACAGAAAGTCCAGATACTCACTGGAAACAGATACTGTCCCTGCAGAGAGTCCCAGGTGCCATGTCTCAGAGCTGTCCAAGACAGCAGCCTCACTGCCGCGAAACAAGATGGTCACTTCATCGGATCCAAACTTGAAAGTTATGCTTAATCGTCATAGAAGAAGGATGTCTGATCTAATCTAA

Protein Analysis

633

Amino Acids

70.96

Weight (kDa)

9.55

Isoelectric Point (pI)

52.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Microtub_bd PF16796 77 - 227 4.9e-37 Microtubule binding
Kinesin PF00225 118 - 417 1.6e-100 Kinesin motor domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011297)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 870
AccB1I GGYRCC 1 cut(s) 1773
AccI GTMKAC 1 cut(s) 1567
AccII CGCG 2 cut(s) 333, 1816
AciI CCGC 2 cut(s) 331, 1814
AclWI GGATC 6 cut(s) 67, 358, 681, 1123, 1835, 1848
AcsI RAATTY 1 cut(s) 392
AcuI CTGAAG 4 cut(s) 146, 230, 1301, 1452
AdeI CACNNNGTG 1 cut(s) 490
AfiI CCNNNNNNNGG 1 cut(s) 96
AflIII ACRYGT 1 cut(s) 1390
AgsI TTSAA 9 cut(s) 43, 185, 205, 250, 740, 931, 1316, 1649, 1852
AjnI CCWGG 2 cut(s) 559, 1769
Alw21I GWGCWC 1 cut(s) 580
Alw26I GTCTC 4 cut(s) 350, 888, 1202, 1786
AlwI GGATC 6 cut(s) 67, 358, 681, 1123, 1835, 1848
AlwNI CAGNNNCTG 1 cut(s) 1751
AoxI GGCC 3 cut(s) 701, 1032, 1093
ApeKI GCWGC 6 cut(s) 692, 1073, 1523, 1559, 1583, 1802
ApoI RAATTY 1 cut(s) 392
ArsI GACNNNNNNTTYG 2 cut(s) 1709, 1741
AspS9I GGNCC 5 cut(s) 1032, 1276, 1302, 1424, 1444
AsuC2I CCSGG 2 cut(s) 83, 140
AsuHPI GGTGA 2 cut(s) 54, 1624
AsuII TTCGAA 1 cut(s) 1157
AvaII GGWCC 4 cut(s) 1276, 1302, 1424, 1444
AxyI CCTNAGG 1 cut(s) 1144
BamHI GGATCC 1 cut(s) 1840
BanI GGYRCC 1 cut(s) 1773
BanII GRGCYC 1 cut(s) 580
BbsI GAAGAC 1 cut(s) 366
Bbv12I GWGCWC 1 cut(s) 580
BbvCI CCTCAGC 1 cut(s) 447
BbvI GCAGC 6 cut(s) 704, 1060, 1510, 1570, 1571, 1814
BccI CCATC 6 cut(s) 89, 473, 536, 807, 1709, 1819
BciT130I CCWGG 2 cut(s) 561, 1771
BclI TGATCA 1 cut(s) 312
BcnI CCSGG 2 cut(s) 83, 140
BcoDI GTCTC 4 cut(s) 350, 888, 1202, 1786
BfaI CTAG 6 cut(s) 308, 573, 699, 810, 876, 1491
BfmI CTRYAG 4 cut(s) 1248, 1557, 1584, 1758
BfuAI ACCTGC 1 cut(s) 870
BglII AGATCT 4 cut(s) 27, 467, 588, 842
BisI GCNGC 7 cut(s) 693, 1074, 1524, 1560, 1584, 1803, 1814
BlsI GCNGC 7 cut(s) 694, 1075, 1525, 1561, 1585, 1804, 1815
Bme1390I CCNGG 4 cut(s) 83, 140, 561, 1771
Bme18I GGWCC 4 cut(s) 1276, 1302, 1424, 1444
BmgT120I GGNCC 5 cut(s) 1032, 1276, 1302, 1424, 1444
BmiI GGNNCC 5 cut(s) 456, 558, 1446, 1775, 1842
BmrFI CCNGG 4 cut(s) 83, 140, 561, 1771
BmsI GCATC 5 cut(s) 713, 881, 913, 1158, 1675
BpiI GAAGAC 1 cut(s) 366
BpmI CTGGAG 1 cut(s) 399
Bpu10I CCTNAGC 2 cut(s) 55, 447
Bpu14I TTCGAA 1 cut(s) 1157
BpuEI CTTGAG 1 cut(s) 1639
BpuMI CCSGG 2 cut(s) 83, 140
BsaI GGTCTC 1 cut(s) 888
BsaJI CCNNGG 7 cut(s) 69, 537, 750, 1305, 1538, 1680, 1769
Bsc4I CCNNNNNNNGG 1 cut(s) 96
Bse118I RCCGGY 2 cut(s) 103, 787
Bse1I ACTGG 6 cut(s) 520, 526, 1012, 1416, 1563, 1743
Bse21I CCTNAGG 1 cut(s) 1144
BseBI CCWGG 2 cut(s) 561, 1771
BseDI CCNNGG 7 cut(s) 69, 537, 750, 1305, 1538, 1680, 1769
BseGI GGATG 5 cut(s) 232, 547, 1069, 1690, 1887
BseLI CCNNNNNNNGG 1 cut(s) 96
BseMII CTCAG 8 cut(s) 45, 438, 595, 745, 1065, 1197, 1368, 1797
BseNI ACTGG 6 cut(s) 520, 526, 1012, 1416, 1563, 1743
BseRI GAGGAG 4 cut(s) 250, 569, 1454, 1669
BseXI GCAGC 6 cut(s) 704, 1060, 1510, 1570, 1571, 1814
BsgI GTGCAG 1 cut(s) 456
Bsh1236I CGCG 2 cut(s) 333, 1816
BshFI GGCC 3 cut(s) 703, 1034, 1095
BshNI GGYRCC 1 cut(s) 1773
BsiHKAI GWGCWC 1 cut(s) 580
BsiSI CCGG 4 cut(s) 83, 104, 140, 788
BslFI GGGAC 5 cut(s) 122, 1430, 1440, 1739, 1752
BslI CCNNNNNNNGG 1 cut(s) 96
BsmAI GTCTC 4 cut(s) 350, 888, 1202, 1786
BsmBI CGTCTC 1 cut(s) 350
BsmFI GGGAC 5 cut(s) 122, 1430, 1440, 1739, 1752
BsnI GGCC 3 cut(s) 703, 1034, 1095
Bso31I GGTCTC 1 cut(s) 888
Bsp119I TTCGAA 1 cut(s) 1157
Bsp1286I GDGCHC 1 cut(s) 580
Bsp19I CCATGG 2 cut(s) 69, 537
BspACI CCGC 2 cut(s) 331, 1814
BspANI GGCC 3 cut(s) 703, 1034, 1095
BspCNI CTCAG 8 cut(s) 44, 439, 594, 744, 1064, 1198, 1369, 1796
BspFNI CGCG 2 cut(s) 333, 1816
BspHI TCATGA 1 cut(s) 1545
BspLI GGNNCC 5 cut(s) 456, 558, 1446, 1775, 1842
BspMAI CTGCAG 3 cut(s) 1561, 1588, 1762
BspMI ACCTGC 1 cut(s) 870
BspPI GGATC 6 cut(s) 67, 358, 681, 1123, 1835, 1848
BspT104I TTCGAA 1 cut(s) 1157
BspT107I GGYRCC 1 cut(s) 1773
BspTNI GGTCTC 1 cut(s) 888
BsrFI RCCGGY 2 cut(s) 103, 787
BsrI ACTGG 6 cut(s) 520, 526, 1012, 1416, 1563, 1743
BssAI RCCGGY 2 cut(s) 103, 787
BssECI CCNNGG 7 cut(s) 69, 537, 750, 1305, 1538, 1680, 1769
BssT1I CCWWGG 4 cut(s) 69, 537, 750, 1305
Bst2UI CCWGG 2 cut(s) 561, 1771
Bst4CI ACNGT 5 cut(s) 172, 201, 957, 1386, 1753
Bst6I CTCTTC 2 cut(s) 227, 1229
BstBI TTCGAA 1 cut(s) 1157
BstC8I GCNNGC 1 cut(s) 105
BstDSI CCRYGG 2 cut(s) 69, 537
BstF5I GGATG 5 cut(s) 232, 547, 1069, 1690, 1887
BstFNI CGCG 2 cut(s) 333, 1816
BstMAI GTCTC 4 cut(s) 350, 888, 1202, 1786
BstMWI GCNNNNNNNGC 2 cut(s) 932, 1238
BstNI CCWGG 2 cut(s) 561, 1771
BstNSI RCATGY 2 cut(s) 646, 1394
BstSCI CCNGG 4 cut(s) 81, 138, 559, 1769
BstSFI CTRYAG 4 cut(s) 1248, 1557, 1584, 1758
BstUI CGCG 2 cut(s) 333, 1816
BstV1I GCAGC 6 cut(s) 704, 1060, 1510, 1570, 1571, 1814
BstV2I GAAGAC 1 cut(s) 366
BstX2I RGATCY 7 cut(s) 27, 467, 588, 673, 842, 1128, 1840
BstYI RGATCY 7 cut(s) 27, 467, 588, 673, 842, 1128, 1840
Bsu36I CCTNAGG 1 cut(s) 1144
BsuRI GGCC 3 cut(s) 703, 1034, 1095
BtgI CCRYGG 2 cut(s) 69, 537
BtsCI GGATG 5 cut(s) 232, 547, 1069, 1690, 1887
BtsI GCAGTG 3 cut(s) 886, 1554, 1808
BtsIMutI CAGTG 6 cut(s) 177, 519, 886, 1554, 1736, 1808
BveI ACCTGC 1 cut(s) 870
Cac8I GCNNGC 1 cut(s) 105
CaiI CAGNNNCTG 1 cut(s) 1751
CciI TCATGA 1 cut(s) 1545
Cfr10I RCCGGY 2 cut(s) 103, 787
Cfr13I GGNCC 5 cut(s) 1032, 1276, 1302, 1424, 1444
DraIII CACNNNGTG 1 cut(s) 490
Eam1104I CTCTTC 2 cut(s) 227, 1229
EarI CTCTTC 2 cut(s) 227, 1229
Ecl136II GAGCTC 1 cut(s) 578
Eco130I CCWWGG 4 cut(s) 69, 537, 750, 1305
Eco24I GRGCYC 1 cut(s) 580
Eco31I GGTCTC 1 cut(s) 888
Eco47I GGWCC 4 cut(s) 1276, 1302, 1424, 1444
Eco53kI GAGCTC 1 cut(s) 578
Eco57I CTGAAG 4 cut(s) 146, 230, 1301, 1452
Eco81I CCTNAGG 1 cut(s) 1144
EcoICRI GAGCTC 1 cut(s) 578
EcoO109I RGGNCCY 2 cut(s) 1276, 1444
EcoRII CCWGG 2 cut(s) 559, 1769
EcoT14I CCWWGG 4 cut(s) 69, 537, 750, 1305
EcoT38I GRGCYC 1 cut(s) 580
ErhI CCWWGG 4 cut(s) 69, 537, 750, 1305
Esp3I CGTCTC 1 cut(s) 350
FalI AAGNNNNNCTT 2 cut(s) 1845, 1877
FaqI GGGAC 5 cut(s) 122, 1430, 1440, 1739, 1752
FauNDI CATATG 1 cut(s) 1627
FbaI TGATCA 1 cut(s) 312
FblI GTMKAC 1 cut(s) 1567
Fnu4HI GCNGC 7 cut(s) 693, 1074, 1524, 1560, 1584, 1803, 1814
FokI GGATG 5 cut(s) 239, 554, 1076, 1697, 1894
FriOI GRGCYC 1 cut(s) 580
Fsp4HI GCNGC 7 cut(s) 693, 1074, 1524, 1560, 1584, 1803, 1814
FspBI CTAG 6 cut(s) 308, 573, 699, 810, 876, 1491
GluI GCNGC 7 cut(s) 693, 1074, 1524, 1560, 1584, 1803, 1814
GsuI CTGGAG 1 cut(s) 399
HaeIII GGCC 3 cut(s) 703, 1034, 1095
HapII CCGG 4 cut(s) 83, 104, 140, 788
HincII GTYRAC 1 cut(s) 1568
HindII GTYRAC 1 cut(s) 1568
HindIII AAGCTT 2 cut(s) 243, 1615
HinfI GANTC 8 cut(s) 74, 86, 154, 282, 327, 564, 1139, 1765
HpaII CCGG 4 cut(s) 83, 104, 140, 788
HphI GGTGA 2 cut(s) 54, 1624
Hpy166II GTNNAC 3 cut(s) 655, 1193, 1568
Hpy188III TCNNGA 5 cut(s) 182, 378, 794, 1546, 1728
Hpy8I GTNNAC 3 cut(s) 655, 1193, 1568
HpyAV CCTTC 7 cut(s) 179, 1023, 1077, 1366, 1437, 1465, 1872
HpyCH4III ACNGT 5 cut(s) 172, 201, 957, 1386, 1753
HpyCH4V TGCA 8 cut(s) 177, 197, 473, 726, 1559, 1586, 1708, 1760
HpyF10VI GCNNNNNNNGC 2 cut(s) 932, 1238
KroI GCCGGC 1 cut(s) 103
KroNI GCCGGC 1 cut(s) 105
Ksp22I TGATCA 1 cut(s) 312
LmnI GCTCC 5 cut(s) 142, 380, 556, 1001, 1309
Lsp1109I GCAGC 6 cut(s) 704, 1060, 1510, 1570, 1571, 1814
LweI GCATC 5 cut(s) 713, 881, 913, 1158, 1675
MaeI CTAG 6 cut(s) 308, 573, 699, 810, 876, 1491
MaeIII GTNAC 7 cut(s) 482, 715, 1380, 1386, 1630, 1673, 1828
MflI RGATCY 7 cut(s) 27, 467, 588, 673, 842, 1128, 1840
MhlI GDGCHC 1 cut(s) 580
MluCI AATT 7 cut(s) 192, 392, 459, 1528, 1596, 1644, 1649
MlyI GAGTC 2 cut(s) 291, 1774
MmeI TCCRAC 2 cut(s) 627, 937
MroNI GCCGGC 1 cut(s) 103
MseI TTAA 6 cut(s) 893, 993, 1134, 1356, 1401, 1863
MslI CAYNNNNRTG 1 cut(s) 921
MspA1I CMGCKG 1 cut(s) 347
MspI CCGG 4 cut(s) 83, 104, 140, 788
MspR9I CCNGG 4 cut(s) 83, 140, 561, 1771
MvaI CCWGG 2 cut(s) 561, 1771
MvnI CGCG 2 cut(s) 333, 1816
MwoI GCNNNNNNNGC 2 cut(s) 932, 1238
NaeI GCCGGC 1 cut(s) 105
NciI CCSGG 2 cut(s) 83, 140
NcoI CCATGG 2 cut(s) 69, 537
NdeI CATATG 1 cut(s) 1627
NgoMIV GCCGGC 1 cut(s) 103
NlaIV GGNNCC 5 cut(s) 456, 558, 1446, 1775, 1842
NmeAIII GCCGAG 1 cut(s) 1634
NmuCI GTSAC 3 cut(s) 482, 1630, 1828
NspI RCATGY 2 cut(s) 646, 1394
NspV TTCGAA 1 cut(s) 1157
PagI TCATGA 1 cut(s) 1545
PciI ACATGT 1 cut(s) 1390
PcsI WCGNNNNNNNCGW 1 cut(s) 832
PdiI GCCGGC 1 cut(s) 105
PfeI GAWTC 6 cut(s) 74, 86, 154, 327, 564, 1139
PfoI TCCNGGA 1 cut(s) 138
PkrI GCNGC 7 cut(s) 694, 1075, 1525, 1561, 1585, 1804, 1815
PleI GAGTC 2 cut(s) 290, 1773
PpsI GAGTC 2 cut(s) 290, 1773
PpuMI RGGWCCY 2 cut(s) 1276, 1444
PscI ACATGT 1 cut(s) 1390
Psp124BI GAGCTC 1 cut(s) 580
Psp5II RGGWCCY 2 cut(s) 1276, 1444
Psp6I CCWGG 2 cut(s) 559, 1769
PspGI CCWGG 2 cut(s) 559, 1769
PspN4I GGNNCC 5 cut(s) 456, 558, 1446, 1775, 1842
PspPI GGNCC 5 cut(s) 1032, 1276, 1302, 1424, 1444
PspPPI RGGWCCY 2 cut(s) 1276, 1444
PstI CTGCAG 3 cut(s) 1561, 1588, 1762
PstNI CAGNNNCTG 1 cut(s) 1751
PsuI RGATCY 7 cut(s) 27, 467, 588, 673, 842, 1128, 1840
PvuII CAGCTG 1 cut(s) 347
RseI CAYNNNNRTG 1 cut(s) 921
SacI GAGCTC 1 cut(s) 580
SalI GTCGAC 1 cut(s) 1566
SaqAI TTAA 6 cut(s) 893, 993, 1134, 1356, 1401, 1863
SatI GCNGC 7 cut(s) 693, 1074, 1524, 1560, 1584, 1803, 1814
Sau96I GGNCC 5 cut(s) 1032, 1276, 1302, 1424, 1444
SchI GAGTC 2 cut(s) 291, 1774
ScrFI CCNGG 4 cut(s) 83, 140, 561, 1771
SduI GDGCHC 1 cut(s) 580
SfaNI GCATC 5 cut(s) 713, 881, 913, 1158, 1675
SfcI CTRYAG 4 cut(s) 1248, 1557, 1584, 1758
SfuI TTCGAA 1 cut(s) 1157
SinI GGWCC 4 cut(s) 1276, 1302, 1424, 1444
SmiMI CAYNNNNRTG 1 cut(s) 921
SmlI CTYRAG 1 cut(s) 1618
SmoI CTYRAG 1 cut(s) 1618
Sse9I AATT 7 cut(s) 192, 392, 459, 1528, 1596, 1644, 1649
SsiI CCGC 2 cut(s) 331, 1814
SspI AATATT 1 cut(s) 1399
SspMI CTAG 6 cut(s) 308, 573, 699, 810, 876, 1491
SstI GAGCTC 1 cut(s) 580
StyD4I CCNGG 4 cut(s) 81, 138, 559, 1769
StyI CCWWGG 4 cut(s) 69, 537, 750, 1305
TaaI ACNGT 5 cut(s) 172, 201, 957, 1386, 1753
TaqI TCGA 6 cut(s) 280, 292, 635, 768, 1157, 1567
TasI AATT 7 cut(s) 192, 392, 459, 1528, 1596, 1644, 1649
TauI GCSGC 1 cut(s) 1816
TfiI GAWTC 6 cut(s) 74, 86, 154, 327, 564, 1139
Tru1I TTAA 6 cut(s) 893, 993, 1134, 1356, 1401, 1863
Tru9I TTAA 6 cut(s) 893, 993, 1134, 1356, 1401, 1863
TscAI CASTG 6 cut(s) 177, 526, 893, 1561, 1743, 1815
TseFI GTSAC 3 cut(s) 482, 1630, 1828
TseI GCWGC 6 cut(s) 692, 1073, 1523, 1559, 1583, 1802
Tsp45I GTSAC 3 cut(s) 482, 1630, 1828
TspDTI ATGAA 8 cut(s) 26, 36, 162, 723, 748, 1166, 1534, 1824
TspRI CASTG 6 cut(s) 177, 526, 893, 1561, 1743, 1815
VpaK11BI GGWCC 4 cut(s) 1276, 1302, 1424, 1444
XapI RAATTY 1 cut(s) 392
XceI RCATGY 2 cut(s) 646, 1394
XcmI CCANNNNNNNNNTGG 1 cut(s) 1735
XmiI GTMKAC 1 cut(s) 1567
XspI CTAG 6 cut(s) 308, 573, 699, 810, 876, 1491
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.