Rorug02G0641200
ERF Family

Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000152
Physical Location & Seq
Forward (+)
75335664 .. 75346033
10370 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0641200.1

Sequence Viewer

Length: 840 bp
ATGGCTCTGCGCAGTTTAGCTTTTTGCATGGTGATGGTTTTGGTTTTGGTGGTTGCACTTGCGCCTGGTGCGGTGGAGGGCTCGAGTCGGAAGCTTTTGGCTCAGGCAAATGCGGCTGTGGCTGCACAGGCGTACGGTATATGCAACGCCTTGGTAACTGTGCATGGTTACCCATGCCAAGAGATAACTGTGACTACCGACGATGGTTACATACTGAGCGTGCAGAGAATTGGTGGTGGTGGCACCGGGAAACCACCGGTGATAATTCAGCATGGTGTTCTTGTGGATGCAGCAGCCTGGCTGATGAACTCTCCGGATAAAAATCTGCCGTTGATTCTAGCTGATAGTGGATTTGATGTGTGGATGGCTAACACCCGAGGGACCAGATTTAGCCGACGTCATACCTCCATGGACCCCAGCGATCCGAAATTTTGGAATTGGTCTTGGGATGAACTGGTGGCTCATGACCTACCAGCTGTTTTTAATTACGTGCATGGCCAAACAAAACAGAAGATTAACTACGTCGGTCATTCCCTGGGGACTTTGTTAGCATTGGCTTCGCTTTCAGAAGGGAAGCTAGTGGATCAGCTGAAATCAGTAGCTTTGCTAACTCCCATTGCTTACCTGACTCACATGAGTACACCAATCTGTGCGGTTGGGGCCAGACTCTTTGCTGGCGAGATCATAACAGCATTTCGTTTTGCAGAGTTCGATCCAAAAGGAGAGCCCGTGGCTGAATTCTTAGATCATCTATGTGCCACTCCAGGAGTTCCATGTTACGACATATTCTCAGTACTCACCGGCAAAAATTCTTGTCTCAATGCTTCCACGTACTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

279

Amino Acids

29.94

Weight (kDa)

6.22

Isoelectric Point (pI)

28.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydro_lipase PF04083 51 - 103 2.6e-16 Partial alpha/beta-hydrolase lipase region
Abhydrolase_1 PF00561 85 - 214 7.3e-10 alpha/beta hydrolase fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000152)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G17950
fragaria_vesca FvH4_1g11910 FvH4_3g04400
malus_domestica MD02G1133000.v1.1 MD15G1245600.v1.1
prunus_persica Prupe.7G167700_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0314921 RchiOBHm_Chr1g0319941 RchiOBHm_Chr1g0321251 RchiOBHm_Chr1g0323021 RchiOBHm_Chr1g0324491 RchiOBHm_Chr1g0325171 RchiOBHm_Chr1g0360601 RchiOBHm_Chr1g0365451 RchiOBHm_Chr1g0381201 RchiOBHm_Chr2g0085401 RchiOBHm_Chr2g0099501 RchiOBHm_Chr2g0106981 RchiOBHm_Chr2g0130271 RchiOBHm_Chr2g0155121 RchiOBHm_Chr3g0455971 RchiOBHm_Chr3g0459501 RchiOBHm_Chr3g0478111 RchiOBHm_Chr3g0480661 RchiOBHm_Chr4g0388561 RchiOBHm_Chr4g0394421 RchiOBHm_Chr4g0424371 RchiOBHm_Chr5g0028631 RchiOBHm_Chr5g0069751 RchiOBHm_Chr5g0076691 RchiOBHm_Chr5g0076711 RchiOBHm_Chr5g0076721 RchiOBHm_Chr5g0079671 RchiOBHm_Chr5g0079731 RchiOBHm_Chr5g0079911 RchiOBHm_Chr5g0081741 RchiOBHm_Chr6g0255231 RchiOBHm_Chr6g0283251 RchiOBHm_Chr6g0300091 RchiOBHm_Chr7g0190751 RchiOBHm_Chr7g0240241
rosa_multiflora Rmu_co8441375.1_g000001 Rmu_sc0000110.1_g000027 Rmu_sc0000187.1_g000008 Rmu_sc0000240.1_g000065 Rmu_sc0000251.1_g000004 Rmu_sc0000272.1_g000025 Rmu_sc0000276.1_g000074 Rmu_sc0000284.1_g000010 Rmu_sc0000285.1_g000021 Rmu_sc0000360.1_g000034 Rmu_sc0000365.1_g000038 Rmu_sc0000368.1_g000013 Rmu_sc0000368.1_g000025 Rmu_sc0000770.1_g000044 Rmu_sc0000770.1_g000052 Rmu_sc0000795.1_g000098 Rmu_sc0000945.1_g000037 Rmu_sc0000949.1_g000023 Rmu_sc0000982.1_g000002 Rmu_sc0001424.1_g000004 Rmu_sc0001775.1_g000004 Rmu_sc0001952.1_g000010 Rmu_sc0002080.1_g000046 Rmu_sc0002141.1_g000016 Rmu_sc0002183.1_g000004 Rmu_sc0002187.1_g000040 Rmu_sc0002263.1_g000057 Rmu_sc0002351.1_g000061 Rmu_sc0002542.1_g000017 Rmu_sc0002751.1_g000003 Rmu_sc0002792.1_g000029 Rmu_sc0002798.1_g000020 Rmu_sc0002985.1_g000010 Rmu_sc0003124.1_g000019 Rmu_sc0003207.1_g000019 Rmu_sc0003237.1_g000003 Rmu_sc0003363.1_g000050 Rmu_sc0003443.1_g000025 Rmu_sc0003465.1_g000032 Rmu_sc0003500.1_g000012 Rmu_sc0003809.1_g000026 Rmu_sc0003859.1_g000032 Rmu_sc0004085.1_g000003 Rmu_sc0004085.1_g000008 Rmu_sc0004571.1_g000019 Rmu_sc0004753.1_g000006 Rmu_sc0004865.1_g000017 Rmu_sc0004881.1_g000007 Rmu_sc0005697.1_g000023 Rmu_sc0005812.1_g000020 Rmu_sc0007076.1_g000001 Rmu_sc0007801.1_g000003 Rmu_sc0008355.1_g000007 Rmu_sc0009380.1_g000006 Rmu_sc0010191.1_g000004 Rmu_sc0010252.1_g000006 Rmu_sc0011026.1_g000001 Rmu_sc0011824.1_g000003 Rmu_sc0012533.1_g000006 Rmu_sc0012640.1_g000006 Rmu_sc0014032.1_g000001 Rmu_sc0014545.1_g000001 Rmu_sc0014840.1_g000008 Rmu_sc0015060.1_g000013 Rmu_sc0018122.1_g000003 Rmu_sc0026563.1_g000004 Rmu_ssc0000213.1_g000057 Rmu_ssc0000213.1_g000091 Rmu_ssc0000262.1_g000021 Rmu_ssc0000282.1_g000021 Rmu_ssc0000295.1_g000041 Rmu_ssc0000438.1_g000002 Rmu_ssc0000472.1_g000015
rosa_roxburghii Rroxscaffold_1G00020080 Rroxscaffold_2G00084980 Rroxscaffold_2G00143020 Rroxscaffold_3G00261750 Rroxscaffold_3G00268610 Rroxscaffold_4G00312950 Rroxscaffold_7G00156650 Rroxscaffold_7G00215160
rosa_rugosa Rorug01G0077100 Rorug01G0201100 Rorug01G0246900 Rorug01G0256600 Rorug02G0080200 Rorug02G0089300 Rorug02G0090700 Rorug02G0177200 Rorug02G0187000 Rorug02G0192600 Rorug02G0232700 Rorug02G0262100 Rorug02G0328300 Rorug02G0408300 Rorug02G0641200 Rorug03G0155000 Rorug03G0185500 Rorug03G0256500 Rorug03G0291000 Rorug03G0299400 Rorug03G0317000 Rorug03G0326700 Rorug03G0330800 Rorug03G0339700 Rorug03G0352900 Rorug04G0029800 Rorug04G0029900 Rorug04G0048100 Rorug04G0075800 Rorug04G0124400 Rorug04G0212100 Rorug04G0212400 Rorug04G0253200 Rorug05G0116700 Rorug05G0146500 Rorug05G0211900 Rorug05G0215700 Rorug05G0216100 Rorug05G0220500 Rorug05G0339400 Rorug05G0352000 Rorug05G0356500.1 Rorug05G0398900 Rorug05G0474700 Rorug05G0511400 Rorug05G0540200 Rorug05G0541000 Rorug05G0572900.1 Rorug05G0584000 Rorug06G0000900 Rorug06G0014600 Rorug06G0018800 Rorug06G0026100 Rorug06G0042900 Rorug06G0082600 Rorug06G0133900 Rorug06G0229100 Rorug07G0321400 Rorug07G0326400 Rorug07G0326600.1
rosa_wichuraiana Rw0G017710 Rw1G012170 Rw1G039350 Rw2G010030 Rw3G024430 Rw5G045720 Rw7G025340 Rw7G040870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 400
Acc16I TGCGCA 1 cut(s) 11
AccB1I GGYRCC 1 cut(s) 242
AccIII TCCGGA 1 cut(s) 313
AciI CCGC 3 cut(s) 71, 113, 653
AclWI GGATC 3 cut(s) 416, 591, 707
AcoI YGGCCR 1 cut(s) 496
AcsI RAATTY 3 cut(s) 428, 737, 808
AcyI GRCGYC 1 cut(s) 397
AfaI GTAC 4 cut(s) 134, 640, 795, 833
AgeI ACCGGT 1 cut(s) 256
AjnI CCWGG 4 cut(s) 64, 296, 534, 763
AluBI AGCT 7 cut(s) 20, 94, 341, 476, 577, 589, 602
AluI AGCT 7 cut(s) 20, 94, 341, 476, 577, 589, 602
Alw26I GTCTC 1 cut(s) 821
AlwI GGATC 3 cut(s) 416, 591, 707
Ama87I CYCGRG 2 cut(s) 82, 375
Aor13HI TCCGGA 1 cut(s) 313
AoxI GGCC 2 cut(s) 496, 660
ApeKI GCWGC 3 cut(s) 122, 290, 293
ApoI RAATTY 3 cut(s) 428, 737, 808
AsiGI ACCGGT 1 cut(s) 256
AspLEI GCGC 2 cut(s) 12, 64
AspS9I GGNCC 3 cut(s) 381, 412, 660
AsuC2I CCSGG 1 cut(s) 247
AsuHPI GGTGA 3 cut(s) 43, 271, 790
AvaI CYCGRG 2 cut(s) 82, 375
AvaII GGWCC 2 cut(s) 381, 412
BalI TGGCCA 1 cut(s) 498
BanI GGYRCC 1 cut(s) 242
BanII GRGCYC 2 cut(s) 83, 729
BarI GAAGNNNNNNTAC 2 cut(s) 503, 535
BbvI GCAGC 3 cut(s) 109, 302, 305
BccI CCATC 3 cut(s) 28, 197, 358
BceAI ACGGC 1 cut(s) 313
BcgI CGANNNNNNTGC 2 cut(s) 540, 574
BciT130I CCWGG 4 cut(s) 66, 298, 536, 765
BcnI CCSGG 1 cut(s) 247
BcoDI GTCTC 1 cut(s) 821
BfaI CTAG 2 cut(s) 338, 578
BisI GCNGC 4 cut(s) 114, 123, 291, 294
BlsI GCNGC 4 cut(s) 115, 124, 292, 295
BmcAI AGTACT 1 cut(s) 795
Bme1390I CCNGG 5 cut(s) 66, 247, 298, 536, 765
Bme18I GGWCC 2 cut(s) 381, 412
BmeT110I CYCGRG 2 cut(s) 82, 375
BmgT120I GGNCC 3 cut(s) 381, 412, 660
BmiI GGNNCC 4 cut(s) 244, 382, 414, 661
BmrFI CCNGG 5 cut(s) 66, 247, 298, 536, 765
BmsI GCATC 1 cut(s) 277
BpmI CTGGAG 1 cut(s) 747
Bpu10I CCTNAGC 1 cut(s) 102
BpuMI CCSGG 1 cut(s) 247
BsaAI YACGTR 2 cut(s) 490, 831
BsaBI GATNNNNATC 1 cut(s) 321
BsaHI GRCGYC 1 cut(s) 397
BsaJI CCNNGG 6 cut(s) 150, 376, 408, 534, 535, 729
BsaWI WCCGGW 2 cut(s) 256, 313
BsaXI ACNNNNNCTCC 2 cut(s) 714, 744
Bse118I RCCGGY 2 cut(s) 256, 800
Bse1I ACTGG 1 cut(s) 459
Bse3DI GCAATG 1 cut(s) 615
Bse8I GATNNNNATC 1 cut(s) 321
BseAI TCCGGA 1 cut(s) 313
BseBI CCWGG 4 cut(s) 66, 298, 536, 765
BseDI CCNNGG 6 cut(s) 150, 376, 408, 534, 535, 729
BseGI GGATG 3 cut(s) 292, 369, 454
BseJI GATNNNNATC 1 cut(s) 321
BseMI GCAATG 1 cut(s) 615
BseMII CTCAG 3 cut(s) 116, 206, 804
BseNI ACTGG 1 cut(s) 459
BseXI GCAGC 3 cut(s) 109, 302, 305
BseYI CCCAGC 1 cut(s) 416
BsgI GTGCAG 2 cut(s) 108, 242
BshFI GGCC 2 cut(s) 498, 662
BshNI GGYRCC 1 cut(s) 242
BshTI ACCGGT 1 cut(s) 256
BsiHKCI CYCGRG 2 cut(s) 82, 375
BsiSI CCGG 4 cut(s) 246, 257, 314, 801
BsiWI CGTACG 1 cut(s) 132
BslFI GGGAC 2 cut(s) 394, 553
BsmAI GTCTC 1 cut(s) 821
BsmFI GGGAC 2 cut(s) 394, 553
BsnI GGCC 2 cut(s) 498, 662
BsoBI CYCGRG 2 cut(s) 82, 375
Bsp1286I GDGCHC 2 cut(s) 83, 729
Bsp13I TCCGGA 1 cut(s) 313
Bsp143I GATC 5 cut(s) 421, 583, 681, 712, 745
Bsp19I CCATGG 1 cut(s) 408
BspACI CCGC 3 cut(s) 71, 113, 653
BspANI GGCC 2 cut(s) 498, 662
BspCNI CTCAG 3 cut(s) 115, 207, 803
BspEI TCCGGA 1 cut(s) 313
BspHI TCATGA 1 cut(s) 463
BspLI GGNNCC 4 cut(s) 244, 382, 414, 661
BspPI GGATC 3 cut(s) 416, 591, 707
BspT107I GGYRCC 1 cut(s) 242
BsrDI GCAATG 1 cut(s) 615
BsrFI RCCGGY 2 cut(s) 256, 800
BsrI ACTGG 1 cut(s) 459
BssAI RCCGGY 2 cut(s) 256, 800
BssECI CCNNGG 6 cut(s) 150, 376, 408, 534, 535, 729
BssMI GATC 5 cut(s) 421, 583, 681, 712, 745
BssNI GRCGYC 1 cut(s) 397
BssT1I CCWWGG 2 cut(s) 150, 408
Bst2UI CCWGG 4 cut(s) 66, 298, 536, 765
Bst4CI ACNGT 4 cut(s) 137, 160, 190, 836
BstACI GRCGYC 1 cut(s) 397
BstBAI YACGTR 2 cut(s) 490, 831
BstC8I GCNNGC 2 cut(s) 221, 676
BstDEI CTNAG 4 cut(s) 102, 215, 742, 790
BstDSI CCRYGG 2 cut(s) 408, 729
BstEII GGTNACC 1 cut(s) 167
BstF5I GGATG 3 cut(s) 292, 369, 454
BstHHI GCGC 2 cut(s) 12, 64
BstKTI GATC 5 cut(s) 424, 586, 684, 715, 748
BstMAI GTCTC 1 cut(s) 821
BstMBI GATC 5 cut(s) 421, 583, 681, 712, 745
BstMWI GCNNNNNNNGC 6 cut(s) 68, 113, 119, 122, 128, 659
BstNI CCWGG 4 cut(s) 66, 298, 536, 765
BstPI GGTNACC 1 cut(s) 167
BstSCI CCNGG 5 cut(s) 64, 245, 296, 534, 763
BstV1I GCAGC 3 cut(s) 109, 302, 305
BsuRI GGCC 2 cut(s) 498, 662
BtgI CCRYGG 2 cut(s) 408, 729
BtsCI GGATG 3 cut(s) 292, 369, 454
Cac8I GCNNGC 2 cut(s) 221, 676
CciI TCATGA 1 cut(s) 463
CfoI GCGC 2 cut(s) 12, 64
Cfr10I RCCGGY 2 cut(s) 256, 800
Cfr13I GGNCC 3 cut(s) 381, 412, 660
Csp6I GTAC 4 cut(s) 133, 639, 794, 832
CspAI ACCGGT 1 cut(s) 256
CviAII CATG 9 cut(s) 28, 164, 174, 272, 409, 464, 494, 634, 774
CviQI GTAC 4 cut(s) 133, 639, 794, 832
DdeI CTNAG 4 cut(s) 102, 215, 742, 790
DpnI GATC 5 cut(s) 423, 585, 683, 714, 747
DpnII GATC 5 cut(s) 421, 583, 681, 712, 745
EaeI YGGCCR 1 cut(s) 496
Eco130I CCWWGG 2 cut(s) 150, 408
Eco24I GRGCYC 2 cut(s) 83, 729
Eco47I GGWCC 2 cut(s) 381, 412
Eco88I CYCGRG 2 cut(s) 82, 375
Eco91I GGTNACC 1 cut(s) 167
EcoO65I GGTNACC 1 cut(s) 167
EcoRI GAATTC 1 cut(s) 737
EcoRII CCWGG 4 cut(s) 64, 296, 534, 763
EcoT14I CCWWGG 2 cut(s) 150, 408
EcoT38I GRGCYC 2 cut(s) 83, 729
ErhI CCWWGG 2 cut(s) 150, 408
FaeI CATG 9 cut(s) 31, 167, 177, 275, 412, 467, 497, 637, 777
FaqI GGGAC 2 cut(s) 394, 553
FatI CATG 9 cut(s) 27, 163, 173, 271, 408, 463, 493, 633, 773
Fnu4HI GCNGC 4 cut(s) 114, 123, 291, 294
FokI GGATG 3 cut(s) 299, 376, 461
FriOI GRGCYC 2 cut(s) 83, 729
Fsp4HI GCNGC 4 cut(s) 114, 123, 291, 294
FspBI CTAG 2 cut(s) 338, 578
FspI TGCGCA 1 cut(s) 11
GlaI GCGC 2 cut(s) 11, 63
GluI GCNGC 4 cut(s) 114, 123, 291, 294
GsaI CCCAGC 1 cut(s) 420
GsuI CTGGAG 1 cut(s) 747
HaeIII GGCC 2 cut(s) 498, 662
HapII CCGG 4 cut(s) 246, 257, 314, 801
HhaI GCGC 2 cut(s) 12, 64
Hin1I GRCGYC 1 cut(s) 397
Hin1II CATG 9 cut(s) 31, 167, 177, 275, 412, 467, 497, 637, 777
Hin6I GCGC 2 cut(s) 10, 62
HinP1I GCGC 2 cut(s) 10, 62
HindIII AAGCTT 1 cut(s) 92
HinfI GANTC 4 cut(s) 85, 334, 628, 666
HpaII CCGG 4 cut(s) 246, 257, 314, 801
HphI GGTGA 3 cut(s) 43, 271, 790
Hpy166II GTNNAC 1 cut(s) 641
Hpy188I TCNGA 3 cut(s) 90, 426, 568
Hpy188III TCNNGA 2 cut(s) 314, 464
Hpy8I GTNNAC 1 cut(s) 641
Hpy99I CGWCG 3 cut(s) 203, 399, 527
HpyAV CCTTC 1 cut(s) 563
HpyCH4III ACNGT 4 cut(s) 137, 160, 190, 836
HpyCH4IV ACGT 4 cut(s) 397, 489, 522, 830
HpyCH4V TGCA 9 cut(s) 27, 56, 125, 144, 163, 223, 290, 493, 704
HpyF10VI GCNNNNNNNGC 6 cut(s) 68, 113, 119, 122, 128, 659
HpyF3I CTNAG 4 cut(s) 102, 215, 742, 790
HpySE526I ACGT 4 cut(s) 397, 489, 522, 830
Hsp92I GRCGYC 1 cut(s) 397
Hsp92II CATG 9 cut(s) 31, 167, 177, 275, 412, 467, 497, 637, 777
HspAI GCGC 2 cut(s) 10, 62
Kpn2I TCCGGA 1 cut(s) 313
Kzo9I GATC 5 cut(s) 421, 583, 681, 712, 745
Lsp1109I GCAGC 3 cut(s) 109, 302, 305
LweI GCATC 1 cut(s) 277
MaeI CTAG 2 cut(s) 338, 578
MaeII ACGT 4 cut(s) 397, 489, 522, 830
MaeIII GTNAC 5 cut(s) 154, 167, 190, 206, 776
MalI GATC 5 cut(s) 423, 585, 683, 714, 747
MboI GATC 5 cut(s) 421, 583, 681, 712, 745
MboII GAAGA 1 cut(s) 523
MhlI GDGCHC 2 cut(s) 83, 729
MlsI TGGCCA 1 cut(s) 498
MluCI AATT 7 cut(s) 228, 264, 428, 436, 484, 737, 808
MluNI TGGCCA 1 cut(s) 498
MlyI GAGTC 3 cut(s) 94, 622, 660
MmeI TCCRAC 1 cut(s) 68
MnlI CCTC 3 cut(s) 70, 371, 415
Mox20I TGGCCA 1 cut(s) 498
MroI TCCGGA 1 cut(s) 313
MscI TGGCCA 1 cut(s) 498
MseI TTAA 2 cut(s) 483, 516
MslI CAYNNNNRTG 2 cut(s) 32, 753
Msp20I TGGCCA 1 cut(s) 498
MspA1I CMGCKG 2 cut(s) 476, 589
MspI CCGG 4 cut(s) 246, 257, 314, 801
MspR9I CCNGG 5 cut(s) 66, 247, 298, 536, 765
MvaI CCWGG 4 cut(s) 66, 298, 536, 765
MwoI GCNNNNNNNGC 6 cut(s) 68, 113, 119, 122, 128, 659
NciI CCSGG 1 cut(s) 247
NcoI CCATGG 1 cut(s) 408
NdeII GATC 5 cut(s) 421, 583, 681, 712, 745
NlaIII CATG 9 cut(s) 31, 167, 177, 275, 412, 467, 497, 637, 777
NlaIV GGNNCC 4 cut(s) 244, 382, 414, 661
NmuCI GTSAC 1 cut(s) 190
NsbI TGCGCA 1 cut(s) 11
PaeR7I CTCGAG 1 cut(s) 82
PagI TCATGA 1 cut(s) 463
PasI CCCWGGG 1 cut(s) 535
PfeI GAWTC 1 cut(s) 334
Pfl23II CGTACG 1 cut(s) 132
PfoI TCCNGGA 1 cut(s) 763
PinAI ACCGGT 1 cut(s) 256
PkrI GCNGC 4 cut(s) 115, 124, 292, 295
PleI GAGTC 3 cut(s) 93, 622, 660
PpsI GAGTC 3 cut(s) 93, 622, 660
Ppu21I YACGTR 2 cut(s) 490, 831
Psp6I CCWGG 4 cut(s) 64, 296, 534, 763
PspEI GGTNACC 1 cut(s) 167
PspFI CCCAGC 1 cut(s) 416
PspGI CCWGG 4 cut(s) 64, 296, 534, 763
PspLI CGTACG 1 cut(s) 132
PspN4I GGNNCC 4 cut(s) 244, 382, 414, 661
PspPI GGNCC 3 cut(s) 381, 412, 660
PspXI VCTCGAGB 1 cut(s) 82
PvuII CAGCTG 2 cut(s) 476, 589
RsaI GTAC 4 cut(s) 134, 640, 795, 833
RsaNI GTAC 4 cut(s) 133, 639, 794, 832
RseI CAYNNNNRTG 2 cut(s) 32, 753
SaqAI TTAA 2 cut(s) 483, 516
SatI GCNGC 4 cut(s) 114, 123, 291, 294
Sau3AI GATC 5 cut(s) 421, 583, 681, 712, 745
Sau96I GGNCC 3 cut(s) 381, 412, 660
ScaI AGTACT 1 cut(s) 795
SchI GAGTC 3 cut(s) 94, 622, 660
ScrFI CCNGG 5 cut(s) 66, 247, 298, 536, 765
SduI GDGCHC 2 cut(s) 83, 729
SfaNI GCATC 1 cut(s) 277
Sfr274I CTCGAG 1 cut(s) 82
SgrAI CRCCGGYG 1 cut(s) 256
SinI GGWCC 2 cut(s) 381, 412
SlaI CTCGAG 1 cut(s) 82
SmiMI CAYNNNNRTG 2 cut(s) 32, 753
SmlI CTYRAG 1 cut(s) 82
SmoI CTYRAG 1 cut(s) 82
Sse9I AATT 7 cut(s) 228, 264, 428, 436, 484, 737, 808
SsiI CCGC 3 cut(s) 71, 113, 653
SspMI CTAG 2 cut(s) 338, 578
StyD4I CCNGG 5 cut(s) 64, 245, 296, 534, 763
StyI CCWWGG 2 cut(s) 150, 408
TaaI ACNGT 4 cut(s) 137, 160, 190, 836
TaiI ACGT 4 cut(s) 400, 492, 525, 833
TaqI TCGA 2 cut(s) 83, 711
TaqII GACCGA 1 cut(s) 515
TasI AATT 7 cut(s) 228, 264, 428, 436, 484, 737, 808
TatI WGTACW 2 cut(s) 638, 793
TauI GCSGC 1 cut(s) 116
TfiI GAWTC 1 cut(s) 334
Tru1I TTAA 2 cut(s) 483, 516
Tru9I TTAA 2 cut(s) 483, 516
TseFI GTSAC 1 cut(s) 190
TseI GCWGC 3 cut(s) 122, 290, 293
Tsp45I GTSAC 1 cut(s) 190
TspDTI ATGAA 2 cut(s) 320, 465
VpaK11BI GGWCC 2 cut(s) 381, 412
XapI RAATTY 3 cut(s) 428, 737, 808
XhoI CTCGAG 1 cut(s) 82
XspI CTAG 2 cut(s) 338, 578
ZraI GACGTC 1 cut(s) 398
ZrmI AGTACT 1 cut(s) 795
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.