Rorug04G0075800

2Fe-2S iron-sulfur cluster binding domain

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Reverse (-)
11636170 .. 11642268
6099 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0075800.1

Sequence Viewer

Length: 2196 bp
ATGAAAGCTAAGAAGTGGATGAATAAAAGAAGATTCAGCATCAGAGGAAGGTTGCAAAAGATGCTGAAGTGTATGCGCTCAGGGGAGCAATTTAGGGTAGAGGATATACCTCATTCATCTGACTCCCTGGCTACTAGAGACTATTCAGCCAGCGGGTACTCATCTCGAACAGGTGAGGTAGAAACAAAGGTGGATAATAGCAATATTGAAGAAGCCGAGTCCTCTCTGCGTGAAAGTGGCTATCTGAACTATGAGGAAGCAAGAGCTCTATTAGGAAGGCTCGAGTATCAAAAAGGTAACACACAAGCTGCTCTTCAAGTATTTGAAGGAATAGACATTGGTGCTGTGATACCCAAGATAAAAGTCTCCATTTCTAGAAGATGTGAGTCCAACAGACGTCGTTCTCAAAGTGATGCTGTTCCACCCATGTCTATGCATGCTGTTAGTTTGCTCCTTGAAGCTGTTTTGCTCAAAGCGAAATCGTTACAGGGACTTGGAAGGTTTGAAGAAGCTGCTCAATCATGCAAACTTATTTTGGACACTGTTGAAACTGCATTACCAGAGGGCTTGCCTGTAAATTTTGCTTCTGATTGTAAATTACAAGAGACTGTTGGTAAAGCCGTTGAGTTACTTCCAGAGTTGTGGATACTTTCTGGTGCTCCCCAAGAAGCTATCTTATCTTACCGTCAGGCTCTCCTCTATCAATGGAGTCTTGACGTTGAAACTACTTCAAAGATTGAAAAAGACTTTGCAGTTTTTCTACTGTACAGTGGTTGTGATGCAAACCCTCCGAATCTCCGTTCACAGATGGAAAGCTCCTTTGTGCCAAGAAATAATACAGAAGAGGCTGTTCTGCTGCTGCTGATTCTACTAAGGAAATTTATTGTTGGAAGGATTAGATGGGATCCATCAATCATTGAGCATCTTTCCTTTGCCTTGTCTGTTTCAGGGAAATTAAGGGATCTAGCCCATCAGATTGAAGAATTGATCCCTGGTATTATGGGAAGGAAAGAAAGATATTTGACTCTAGCTCTGTGTTACTATGGGGAGGGTGAGAACTTGGTTGCTTTGAATCTTTTAAGGAATATTTTAAATGATCGAGAGAGCACAGACTGCATTCTGGAATTATTACTTGCCTCCAAGATTTGCAGTGAAAATTTGGCTTGCATTGAGGATGGAATAAAATTCGCATGTAAAGCACTTTCAGAGTTGGATGGAAAATGCAACCAACTGCTAAGTATTGCAAATTGCTTACTGGGTGTTTCCCTGTCGGTTAAATCCAGATCAGTTTCTTCTGATTCTGAAAGGATTTTGAAGCAGTCTGAAGCATTACAAGCACTGGAAACTGCTGAGACAATCATGAAAGAGAGGAATCCATACATTGTATCTCATCTTTGTCTGGAACATGCCGAGCAAAGGAAGTTGGATATTGCACTTTATTATGCAAAGGAGCTATTAAAACTTGAGGCCGGGTCTAGCATAAAAGCATATATTCTTTTGGCACGAATATTGTCAGCTCAAAAAAGATTCATTGATGCTGAGACTGTAATCAATGCTGCTCTCGATCAGACAGGGAAGTGGGATCAAGGAGACCTGTTGCGAACTAAAGCAAAACTCCAGATTGCACAGGGCCAGTTGAAGAATGCCATAGAAACATATACACATCTTCTGGCTGTTCTTCAAGTTCGGAATAAAAACTTGGGTGTTGAGAAGAGGCTTCTAAAGACTAGGAGAAACCATAATCGAAGCTTGGAAATGGAGACATGGCACGATTTAGCTAATTTGTACACAAATATGTCACAATGGCGGGATGCTGAGGTCTGTCTTTCAAAATCCCAAGCTATCAATCCTCATTCTGCTTCCAGATGGCATTGTACAGGTTTACTCTATGAAGCCAAGGGTCTTCACCAAGAAGCTTTGAAATCATTCAGGAAAGCTTTAGATGTTGAACCCACCCATGTCCCAAGCTTGATATCTACTGCATGTATTCTCAGAAAATTTGGTGGTCAATCATTGCCAGTTGTCAGAAGCTTTCTCATGGACGCGCTACGACTTGACAGAGCAAACCCTTCCGCCTGGTACAATCTTGGGCTGCTCTACAAAGCTGATCCCCGGTCATCGCCATTAGAAACTGCCGAGTGCTTCGAAGCAGCAGCTTATCTAGAAGAACATGCACCGATTGAATCCTTCCGATGA

Protein Analysis

731

Amino Acids

82.09

Weight (kDa)

8.01

Isoelectric Point (pI)

56.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000152)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G17950
fragaria_vesca FvH4_1g11910 FvH4_3g04400
malus_domestica MD02G1133000.v1.1 MD15G1245600.v1.1
prunus_persica Prupe.7G167700_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0314921 RchiOBHm_Chr1g0319941 RchiOBHm_Chr1g0321251 RchiOBHm_Chr1g0323021 RchiOBHm_Chr1g0324491 RchiOBHm_Chr1g0325171 RchiOBHm_Chr1g0360601 RchiOBHm_Chr1g0365451 RchiOBHm_Chr1g0381201 RchiOBHm_Chr2g0085401 RchiOBHm_Chr2g0099501 RchiOBHm_Chr2g0106981 RchiOBHm_Chr2g0130271 RchiOBHm_Chr2g0155121 RchiOBHm_Chr3g0455971 RchiOBHm_Chr3g0459501 RchiOBHm_Chr3g0478111 RchiOBHm_Chr3g0480661 RchiOBHm_Chr4g0388561 RchiOBHm_Chr4g0394421 RchiOBHm_Chr4g0424371 RchiOBHm_Chr5g0028631 RchiOBHm_Chr5g0069751 RchiOBHm_Chr5g0076691 RchiOBHm_Chr5g0076711 RchiOBHm_Chr5g0076721 RchiOBHm_Chr5g0079671 RchiOBHm_Chr5g0079731 RchiOBHm_Chr5g0079911 RchiOBHm_Chr5g0081741 RchiOBHm_Chr6g0255231 RchiOBHm_Chr6g0283251 RchiOBHm_Chr6g0300091 RchiOBHm_Chr7g0190751 RchiOBHm_Chr7g0240241
rosa_multiflora Rmu_co8441375.1_g000001 Rmu_sc0000110.1_g000027 Rmu_sc0000187.1_g000008 Rmu_sc0000240.1_g000065 Rmu_sc0000251.1_g000004 Rmu_sc0000272.1_g000025 Rmu_sc0000276.1_g000074 Rmu_sc0000284.1_g000010 Rmu_sc0000285.1_g000021 Rmu_sc0000360.1_g000034 Rmu_sc0000365.1_g000038 Rmu_sc0000368.1_g000013 Rmu_sc0000368.1_g000025 Rmu_sc0000770.1_g000044 Rmu_sc0000770.1_g000052 Rmu_sc0000795.1_g000098 Rmu_sc0000945.1_g000037 Rmu_sc0000949.1_g000023 Rmu_sc0000982.1_g000002 Rmu_sc0001424.1_g000004 Rmu_sc0001775.1_g000004 Rmu_sc0001952.1_g000010 Rmu_sc0002080.1_g000046 Rmu_sc0002141.1_g000016 Rmu_sc0002183.1_g000004 Rmu_sc0002187.1_g000040 Rmu_sc0002263.1_g000057 Rmu_sc0002351.1_g000061 Rmu_sc0002542.1_g000017 Rmu_sc0002751.1_g000003 Rmu_sc0002792.1_g000029 Rmu_sc0002798.1_g000020 Rmu_sc0002985.1_g000010 Rmu_sc0003124.1_g000019 Rmu_sc0003207.1_g000019 Rmu_sc0003237.1_g000003 Rmu_sc0003363.1_g000050 Rmu_sc0003443.1_g000025 Rmu_sc0003465.1_g000032 Rmu_sc0003500.1_g000012 Rmu_sc0003809.1_g000026 Rmu_sc0003859.1_g000032 Rmu_sc0004085.1_g000003 Rmu_sc0004085.1_g000008 Rmu_sc0004571.1_g000019 Rmu_sc0004753.1_g000006 Rmu_sc0004865.1_g000017 Rmu_sc0004881.1_g000007 Rmu_sc0005697.1_g000023 Rmu_sc0005812.1_g000020 Rmu_sc0007076.1_g000001 Rmu_sc0007801.1_g000003 Rmu_sc0008355.1_g000007 Rmu_sc0009380.1_g000006 Rmu_sc0010191.1_g000004 Rmu_sc0010252.1_g000006 Rmu_sc0011026.1_g000001 Rmu_sc0011824.1_g000003 Rmu_sc0012533.1_g000006 Rmu_sc0012640.1_g000006 Rmu_sc0014032.1_g000001 Rmu_sc0014545.1_g000001 Rmu_sc0014840.1_g000008 Rmu_sc0015060.1_g000013 Rmu_sc0018122.1_g000003 Rmu_sc0026563.1_g000004 Rmu_ssc0000213.1_g000057 Rmu_ssc0000213.1_g000091 Rmu_ssc0000262.1_g000021 Rmu_ssc0000282.1_g000021 Rmu_ssc0000295.1_g000041 Rmu_ssc0000438.1_g000002 Rmu_ssc0000472.1_g000015
rosa_roxburghii Rroxscaffold_1G00020080 Rroxscaffold_2G00084980 Rroxscaffold_2G00143020 Rroxscaffold_3G00261750 Rroxscaffold_3G00268610 Rroxscaffold_4G00312950 Rroxscaffold_7G00156650 Rroxscaffold_7G00215160
rosa_rugosa Rorug01G0077100 Rorug01G0201100 Rorug01G0246900 Rorug01G0256600 Rorug02G0080200 Rorug02G0089300 Rorug02G0090700 Rorug02G0177200 Rorug02G0187000 Rorug02G0192600 Rorug02G0232700 Rorug02G0262100 Rorug02G0328300 Rorug02G0408300 Rorug02G0641200 Rorug03G0155000 Rorug03G0185500 Rorug03G0256500 Rorug03G0291000 Rorug03G0299400 Rorug03G0317000 Rorug03G0326700 Rorug03G0330800 Rorug03G0339700 Rorug03G0352900 Rorug04G0029800 Rorug04G0029900 Rorug04G0048100 Rorug04G0075800 Rorug04G0124400 Rorug04G0212100 Rorug04G0212400 Rorug04G0253200 Rorug05G0116700 Rorug05G0146500 Rorug05G0211900 Rorug05G0215700 Rorug05G0216100 Rorug05G0220500 Rorug05G0339400 Rorug05G0352000 Rorug05G0356500.1 Rorug05G0398900 Rorug05G0474700 Rorug05G0511400 Rorug05G0540200 Rorug05G0541000 Rorug05G0572900.1 Rorug05G0584000 Rorug06G0000900 Rorug06G0014600 Rorug06G0018800 Rorug06G0026100 Rorug06G0042900 Rorug06G0082600 Rorug06G0133900 Rorug06G0229100 Rorug07G0321400 Rorug07G0326400 Rorug07G0326600.1
rosa_wichuraiana Rw0G017710 Rw1G012170 Rw1G039350 Rw2G010030 Rw3G024430 Rw5G045720 Rw7G025340 Rw7G040870

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 400
AccII CGCG 1 cut(s) 2045
AciI CCGC 3 cut(s) 153, 1807, 2073
AclWI GGATC 6 cut(s) 899, 912, 969, 982, 1590, 2102
AcsI RAATTY 5 cut(s) 577, 878, 1156, 1184, 1997
AcuI CTGAAG 2 cut(s) 86, 1344
AcyI GRCGYC 1 cut(s) 397
AfaI GTAC 5 cut(s) 158, 767, 1787, 1876, 2081
AfiI CCNNNNNNNGG 1 cut(s) 1416
AjnI CCWGG 3 cut(s) 126, 991, 2075
AjuI GAANNNNNNNTTGG 2 cut(s) 1682, 1714
Alw21I GWGCWC 3 cut(s) 268, 661, 1109
Alw26I GTCTC 7 cut(s) 132, 370, 599, 1346, 1535, 1584, 1754
AlwI GGATC 6 cut(s) 899, 912, 969, 982, 1590, 2102
Ama87I CYCGRG 1 cut(s) 281
AoxI GGCC 2 cut(s) 1467, 1630
ApeKI GCWGC 8 cut(s) 308, 512, 856, 859, 1556, 2092, 2150, 2153
ApoI RAATTY 5 cut(s) 577, 878, 1156, 1184, 1997
Asp700I GAANNNNTTC 1 cut(s) 1925
AspLEI GCGC 2 cut(s) 78, 2047
AspS9I GGNCC 1 cut(s) 1630
AsuC2I CCSGG 2 cut(s) 1471, 2113
AsuHPI GGTGA 3 cut(s) 185, 1064, 1898
AsuII TTCGAA 1 cut(s) 2145
AvaI CYCGRG 1 cut(s) 281
BamHI GGATCC 1 cut(s) 904
BanII GRGCYC 1 cut(s) 268
BbsI GAAGAC 1 cut(s) 1895
Bbv12I GWGCWC 3 cut(s) 268, 661, 1109
BbvCI CCTCAGC 1 cut(s) 1815
BbvI GCAGC 8 cut(s) 295, 499, 843, 846, 1543, 2079, 2162, 2165
BccI CCATC 7 cut(s) 802, 894, 916, 978, 1169, 1208, 1860
BceAI ACGGC 1 cut(s) 605
BciT130I CCWGG 3 cut(s) 128, 993, 2077
BciVI GTATCC 1 cut(s) 639
BcnI CCSGG 2 cut(s) 1471, 2113
BcoDI GTCTC 7 cut(s) 132, 370, 599, 1346, 1535, 1584, 1754
BfaI CTAG 7 cut(s) 135, 375, 965, 1028, 1476, 1728, 2162
BfuI GTATCC 1 cut(s) 639
BisI GCNGC 8 cut(s) 309, 513, 857, 860, 1557, 2093, 2151, 2154
BlsI GCNGC 8 cut(s) 310, 514, 858, 861, 1558, 2094, 2152, 2155
Bme1390I CCNGG 5 cut(s) 128, 993, 1471, 2077, 2113
BmeT110I CYCGRG 1 cut(s) 281
BmgT120I GGNCC 1 cut(s) 1630
BmiI GGNNCC 1 cut(s) 906
BmrFI CCNGG 5 cut(s) 128, 993, 1471, 2077, 2113
BmrI ACTGGG 1 cut(s) 1265
BmsI GCATC 7 cut(s) 48, 51, 403, 769, 931, 1525, 1801
BmuI ACTGGG 1 cut(s) 1265
BpiI GAAGAC 1 cut(s) 1895
BpmI CTGGAG 1 cut(s) 1601
Bpu10I CCTNAGC 2 cut(s) 79, 1815
Bpu14I TTCGAA 1 cut(s) 2145
BpuEI CTTGAG 1 cut(s) 1484
BpuMI CCSGG 2 cut(s) 1471, 2113
BsaHI GRCGYC 1 cut(s) 397
BsaI GGTCTC 1 cut(s) 1584
BsaJI CCNNGG 4 cut(s) 126, 991, 1896, 2111
Bsc4I CCNNNNNNNGG 1 cut(s) 1416
Bse1I ACTGG 4 cut(s) 1260, 1344, 1633, 2018
Bse3DI GCAATG 1 cut(s) 2012
BseBI CCWGG 3 cut(s) 128, 993, 2077
BseDI CCNNGG 4 cut(s) 126, 991, 1896, 2111
BseGI GGATG 4 cut(s) 24, 1180, 1219, 1816
BseLI CCNNNNNNNGG 1 cut(s) 1416
BseMI GCAATG 1 cut(s) 2012
BseMII CTCAG 5 cut(s) 93, 1341, 1530, 1806, 2005
BseNI ACTGG 4 cut(s) 1260, 1344, 1633, 2018
BseRI GAGGAG 1 cut(s) 686
BseXI GCAGC 8 cut(s) 295, 499, 843, 846, 1543, 2079, 2162, 2165
Bsh1236I CGCG 1 cut(s) 2045
BshFI GGCC 2 cut(s) 1469, 1632
BsiHKAI GWGCWC 3 cut(s) 268, 661, 1109
BsiHKCI CYCGRG 1 cut(s) 281
BsiSI CCGG 2 cut(s) 1470, 2113
BslFI GGGAC 2 cut(s) 504, 1946
BslI CCNNNNNNNGG 1 cut(s) 1416
BsmAI GTCTC 7 cut(s) 132, 370, 599, 1346, 1535, 1584, 1754
BsmFI GGGAC 2 cut(s) 504, 1946
BsmI GAATGC 2 cut(s) 1116, 1648
BsnI GGCC 2 cut(s) 1469, 1632
Bso31I GGTCTC 1 cut(s) 1584
BsoBI CYCGRG 1 cut(s) 281
Bsp119I TTCGAA 1 cut(s) 2145
Bsp1286I GDGCHC 3 cut(s) 268, 661, 1109
Bsp1407I TGTACA 3 cut(s) 765, 1785, 1874
Bsp143I GATC 8 cut(s) 904, 961, 987, 1096, 1283, 1564, 1582, 2107
BspACI CCGC 3 cut(s) 153, 1807, 2073
BspANI GGCC 2 cut(s) 1469, 1632
BspCNI CTCAG 5 cut(s) 92, 1342, 1531, 1807, 2004
BspFNI CGCG 1 cut(s) 2045
BspHI TCATGA 1 cut(s) 1359
BspLI GGNNCC 1 cut(s) 906
BspPI GGATC 6 cut(s) 899, 912, 969, 982, 1590, 2102
BspQI GCTCTTC 1 cut(s) 318
BspT104I TTCGAA 1 cut(s) 2145
BspTNI GGTCTC 1 cut(s) 1584
BsrDI GCAATG 1 cut(s) 2012
BsrGI TGTACA 3 cut(s) 765, 1785, 1874
BsrI ACTGG 4 cut(s) 1260, 1344, 1633, 2018
BssECI CCNNGG 4 cut(s) 126, 991, 1896, 2111
BssMI GATC 8 cut(s) 904, 961, 987, 1096, 1283, 1564, 1582, 2107
BssNI GRCGYC 1 cut(s) 397
BssT1I CCWWGG 1 cut(s) 1896
Bst2UI CCWGG 3 cut(s) 128, 993, 2077
Bst4CI ACNGT 6 cut(s) 544, 610, 686, 765, 770, 1546
Bst6I CTCTTC 3 cut(s) 318, 837, 1706
BstACI GRCGYC 1 cut(s) 397
BstAPI GCANNNNNTGC 2 cut(s) 61, 1113
BstAUI TGTACA 3 cut(s) 765, 1785, 1874
BstBI TTCGAA 1 cut(s) 2145
BstC8I GCNNGC 4 cut(s) 151, 438, 569, 1165
BstDEI CTNAG 8 cut(s) 9, 79, 872, 1235, 1350, 1539, 1815, 1991
BstF5I GGATG 4 cut(s) 24, 1180, 1219, 1816
BstFNI CGCG 1 cut(s) 2045
BstHHI GCGC 2 cut(s) 78, 2047
BstKTI GATC 8 cut(s) 907, 964, 990, 1099, 1286, 1567, 1585, 2110
BstMAI GTCTC 7 cut(s) 132, 370, 599, 1346, 1535, 1584, 1754
BstMBI GATC 8 cut(s) 904, 961, 987, 1096, 1283, 1564, 1582, 2107
BstMWI GCNNNNNNNGC 4 cut(s) 61, 1113, 1196, 1334
BstNI CCWGG 3 cut(s) 128, 993, 2077
BstNSI RCATGY 5 cut(s) 440, 1194, 1409, 1986, 2174
BstSCI CCNGG 5 cut(s) 126, 991, 1469, 2075, 2111
BstUI CGCG 1 cut(s) 2045
BstV1I GCAGC 8 cut(s) 295, 499, 843, 846, 1543, 2079, 2162, 2165
BstV2I GAAGAC 1 cut(s) 1895
BstX2I RGATCY 2 cut(s) 904, 961
BstXI CCANNNNNNTGG 1 cut(s) 642
BstYI RGATCY 2 cut(s) 904, 961
BsuI GTATCC 1 cut(s) 639
BsuRI GGCC 2 cut(s) 1469, 1632
BtgZI GCGATG 1 cut(s) 2103
BtsCI GGATG 4 cut(s) 24, 1180, 1219, 1816
BtsI GCAGTG 1 cut(s) 1156
BtsIMutI CAGTG 4 cut(s) 540, 775, 1156, 1337
Cac8I GCNNGC 4 cut(s) 151, 438, 569, 1165
CciI TCATGA 1 cut(s) 1359
CfoI GCGC 2 cut(s) 78, 2047
Cfr13I GGNCC 1 cut(s) 1630
CseI GACGC 1 cut(s) 2051
Csp6I GTAC 5 cut(s) 157, 766, 1786, 1875, 2080
CviQI GTAC 5 cut(s) 157, 766, 1786, 1875, 2080
DdeI CTNAG 8 cut(s) 9, 79, 872, 1235, 1350, 1539, 1815, 1991
DpnI GATC 8 cut(s) 906, 963, 989, 1098, 1285, 1566, 1584, 2109
DpnII GATC 8 cut(s) 904, 961, 987, 1096, 1283, 1564, 1582, 2107
DraI TTTAAA 1 cut(s) 1092
Eam1104I CTCTTC 3 cut(s) 318, 837, 1706
EarI CTCTTC 3 cut(s) 318, 837, 1706
EciI GGCGGA 1 cut(s) 2062
Ecl136II GAGCTC 1 cut(s) 266
Eco130I CCWWGG 1 cut(s) 1896
Eco24I GRGCYC 1 cut(s) 268
Eco31I GGTCTC 1 cut(s) 1584
Eco32I GATATC 1 cut(s) 1974
Eco53kI GAGCTC 1 cut(s) 266
Eco57I CTGAAG 2 cut(s) 86, 1344
Eco88I CYCGRG 1 cut(s) 281
EcoICRI GAGCTC 1 cut(s) 266
EcoRII CCWGG 3 cut(s) 126, 991, 2075
EcoRV GATATC 1 cut(s) 1974
EcoT14I CCWWGG 1 cut(s) 1896
EcoT22I ATGCAT 1 cut(s) 438
EcoT38I GRGCYC 1 cut(s) 268
ErhI CCWWGG 1 cut(s) 1896
FalI AAGNNNNNCTT 2 cut(s) 297, 329
FaqI GGGAC 2 cut(s) 504, 1946
FauI CCCGC 2 cut(s) 146, 1800
Fnu4HI GCNGC 8 cut(s) 309, 513, 857, 860, 1557, 2093, 2151, 2154
FokI GGATG 4 cut(s) 31, 1187, 1226, 1823
FriOI GRGCYC 1 cut(s) 268
Fsp4HI GCNGC 8 cut(s) 309, 513, 857, 860, 1557, 2093, 2151, 2154
FspBI CTAG 7 cut(s) 135, 375, 965, 1028, 1476, 1728, 2162
GlaI GCGC 2 cut(s) 77, 2046
GluI GCNGC 8 cut(s) 309, 513, 857, 860, 1557, 2093, 2151, 2154
GsuI CTGGAG 1 cut(s) 1601
HaeIII GGCC 2 cut(s) 1469, 1632
HapII CCGG 2 cut(s) 1470, 2113
HgaI GACGC 1 cut(s) 2051
HhaI GCGC 2 cut(s) 78, 2047
Hin1I GRCGYC 1 cut(s) 397
Hin6I GCGC 2 cut(s) 76, 2045
HinP1I GCGC 2 cut(s) 76, 2045
HindIII AAGCTT 5 cut(s) 1747, 1914, 1935, 1966, 2029
HpaII CCGG 2 cut(s) 1470, 2113
HphI GGTGA 3 cut(s) 185, 1064, 1898
Hpy166II GTNNAC 3 cut(s) 803, 1788, 1883
Hpy8I GTNNAC 3 cut(s) 803, 1788, 1883
Hpy99I CGWCG 1 cut(s) 402
HpyAV CCTTC 7 cut(s) 42, 270, 320, 492, 885, 999, 2079
HpyCH4III ACNGT 6 cut(s) 544, 610, 686, 765, 770, 1546
HpyCH4IV ACGT 2 cut(s) 397, 717
HpyF10VI GCNNNNNNNGC 4 cut(s) 61, 1113, 1196, 1334
HpyF3I CTNAG 8 cut(s) 9, 79, 872, 1235, 1350, 1539, 1815, 1991
HpySE526I ACGT 2 cut(s) 397, 717
Hsp92I GRCGYC 1 cut(s) 397
HspAI GCGC 2 cut(s) 76, 2045
Kzo9I GATC 8 cut(s) 904, 961, 987, 1096, 1283, 1564, 1582, 2107
LguI GCTCTTC 1 cut(s) 318
LmnI GCTCC 5 cut(s) 85, 456, 664, 821, 1450
Lsp1109I GCAGC 8 cut(s) 295, 499, 843, 846, 1543, 2079, 2162, 2165
LweI GCATC 7 cut(s) 48, 51, 403, 769, 931, 1525, 1801
MaeI CTAG 7 cut(s) 135, 375, 965, 1028, 1476, 1728, 2162
MaeII ACGT 2 cut(s) 397, 717
MaeIII GTNAC 5 cut(s) 296, 483, 627, 1037, 1797
MalI GATC 8 cut(s) 906, 963, 989, 1098, 1285, 1566, 1584, 2109
MboI GATC 8 cut(s) 904, 961, 987, 1096, 1283, 1564, 1582, 2107
MflI RGATCY 2 cut(s) 904, 961
MhlI GDGCHC 3 cut(s) 268, 661, 1109
MlyI GAGTC 5 cut(s) 116, 227, 395, 718, 1018
MmeI TCCRAC 4 cut(s) 414, 868, 1191, 1404
Mph1103I ATGCAT 1 cut(s) 438
MroXI GAANNNNTTC 1 cut(s) 1925
MseI TTAA 5 cut(s) 956, 1079, 1091, 1275, 1457
MslI CAYNNNNRTG 2 cut(s) 431, 1793
MspA1I CMGCKG 1 cut(s) 153
MspI CCGG 2 cut(s) 1470, 2113
MspR9I CCNGG 5 cut(s) 128, 993, 1471, 2077, 2113
Mva1269I GAATGC 2 cut(s) 1116, 1648
MvaI CCWGG 3 cut(s) 128, 993, 2077
MvnI CGCG 1 cut(s) 2045
MwoI GCNNNNNNNGC 4 cut(s) 61, 1113, 1196, 1334
NciI CCSGG 2 cut(s) 1471, 2113
NdeII GATC 8 cut(s) 904, 961, 987, 1096, 1283, 1564, 1582, 2107
NlaIV GGNNCC 1 cut(s) 906
NmeAIII GCCGAG 3 cut(s) 241, 1435, 2161
NmuCI GTSAC 1 cut(s) 1797
NsiI ATGCAT 1 cut(s) 438
NspI RCATGY 5 cut(s) 440, 1194, 1409, 1986, 2174
NspV TTCGAA 1 cut(s) 2145
PaeI GCATGC 1 cut(s) 440
PaeR7I CTCGAG 1 cut(s) 281
PagI TCATGA 1 cut(s) 1359
PciSI GCTCTTC 1 cut(s) 318
PctI GAATGC 2 cut(s) 1116, 1648
PdmI GAANNNNTTC 1 cut(s) 1925
PfeI GAWTC 8 cut(s) 33, 793, 865, 1072, 1298, 1372, 1527, 2183
PkrI GCNGC 8 cut(s) 310, 514, 858, 861, 1558, 2094, 2152, 2155
PleI GAGTC 5 cut(s) 116, 226, 394, 717, 1018
PpsI GAGTC 5 cut(s) 116, 226, 394, 717, 1018
Psp124BI GAGCTC 1 cut(s) 268
Psp6I CCWGG 3 cut(s) 126, 991, 2075
PspGI CCWGG 3 cut(s) 126, 991, 2075
PspN4I GGNNCC 1 cut(s) 906
PspPI GGNCC 1 cut(s) 1630
PspXI VCTCGAGB 1 cut(s) 281
PsuI RGATCY 2 cut(s) 904, 961
RsaI GTAC 5 cut(s) 158, 767, 1787, 1876, 2081
RsaNI GTAC 5 cut(s) 157, 766, 1786, 1875, 2080
RseI CAYNNNNRTG 2 cut(s) 431, 1793
SacI GAGCTC 1 cut(s) 268
SapI GCTCTTC 1 cut(s) 318
SaqAI TTAA 5 cut(s) 956, 1079, 1091, 1275, 1457
SatI GCNGC 8 cut(s) 309, 513, 857, 860, 1557, 2093, 2151, 2154
Sau3AI GATC 8 cut(s) 904, 961, 987, 1096, 1283, 1564, 1582, 2107
Sau96I GGNCC 1 cut(s) 1630
SchI GAGTC 5 cut(s) 116, 227, 395, 718, 1018
ScrFI CCNGG 5 cut(s) 128, 993, 1471, 2077, 2113
SduI GDGCHC 3 cut(s) 268, 661, 1109
SfaNI GCATC 7 cut(s) 48, 51, 403, 769, 931, 1525, 1801
Sfr274I CTCGAG 1 cut(s) 281
SfuI TTCGAA 1 cut(s) 2145
SlaI CTCGAG 1 cut(s) 281
SmiMI CAYNNNNRTG 2 cut(s) 431, 1793
SmlI CTYRAG 2 cut(s) 281, 1463
SmoI CTYRAG 2 cut(s) 281, 1463
SphI GCATGC 1 cut(s) 440
SsiI CCGC 3 cut(s) 153, 1807, 2073
SspI AATATT 3 cut(s) 205, 1087, 1509
SspMI CTAG 7 cut(s) 135, 375, 965, 1028, 1476, 1728, 2162
SstI GAGCTC 1 cut(s) 268
StyD4I CCNGG 5 cut(s) 126, 991, 1469, 2075, 2111
StyI CCWWGG 1 cut(s) 1896
TaaI ACNGT 6 cut(s) 544, 610, 686, 765, 770, 1546
TaiI ACGT 2 cut(s) 400, 720
TaqI TCGA 6 cut(s) 166, 282, 1099, 1563, 1744, 2145
TatI WGTACW 3 cut(s) 765, 1785, 1874
TfiI GAWTC 8 cut(s) 33, 793, 865, 1072, 1298, 1372, 1527, 2183
Tru1I TTAA 5 cut(s) 956, 1079, 1091, 1275, 1457
Tru9I TTAA 5 cut(s) 956, 1079, 1091, 1275, 1457
TscAI CASTG 4 cut(s) 547, 775, 1156, 1344
TseFI GTSAC 1 cut(s) 1797
TseI GCWGC 8 cut(s) 308, 512, 856, 859, 1556, 2092, 2150, 2153
Tsp45I GTSAC 1 cut(s) 1797
TspDTI ATGAA 6 cut(s) 17, 35, 105, 1376, 1519, 1905
TspGWI ACGGA 1 cut(s) 788
TspRI CASTG 4 cut(s) 547, 775, 1156, 1344
XapI RAATTY 5 cut(s) 577, 878, 1156, 1184, 1997
XbaI TCTAGA 2 cut(s) 374, 2161
XceI RCATGY 5 cut(s) 440, 1194, 1409, 1986, 2174
XhoI CTCGAG 1 cut(s) 281
XmnI GAANNNNTTC 1 cut(s) 1925
XspI CTAG 7 cut(s) 135, 375, 965, 1028, 1476, 1728, 2162
ZraI GACGTC 1 cut(s) 398
Zsp2I ATGCAT 1 cut(s) 438
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.