Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0000152

Physical Location & Seq

Genomic Coordinates Reverse (-)

10172639 .. 10173949

Gene Structure 1311 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G010030.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 876 bp

ATGGAACCACAAACCCAGCAACCAACCGAGGATGGAGGAAGCAACAAAGCAGCCGGGAGTAGTGCTAACATGCTTTGCAGGCAGAGCAGTACCAGGTGGACTCCCACTACAGATCAGATAAGAATCCTCAAGGAGCTTTACTACAACAAGGGAGTTAGGTCCCCAACTGCAGAGCAGATTCAGAGGATCTGTCTCCAGCTGAAACGGTACGGAAAGATTGAGGGCAAGAACGTTTTTTACTGGTTCCAGAACCACAAGGCCCGGGAGAGGCAGAAGAAGAGGTTCACTTCGGATGTTCATGTGCCCATGCAAAGATCAGGGCTTGTTGGTAATGGTAATGGTACCAATTGGAAACCTGAGGATCAGTATATTAACATGAACAACAAGTACTCTAACATTTGGGTTTCTTCTGCATCTGCTTCTGCTTCTTCAACTGGTGTGATTGCTTTTAACAAGCAGATGGGGAACTATGGTGGTTATGGATCTATGAACATGGAGAAGAGTTTTAGGGATTGTTCAATCTCAACTGGAGGGGGAACTAGTTCTATTGGTGTTGGTGGATCCATTAGTCACAATTTTGGGCAACACCCATATTCCTCCTCATCCTACACTACTAGTACTAGTACTACTTTCTTTGACATGAATGAAGAACAAACTTTCATGGAACAACAAGGAGAAGATCACCAGGAGATTGAAACCCTTCCACTATTCCCCATGCACGGTGAGGACATCTTTGGCAACATGAAGACTACTTCCGAAGGAGGTGGCAGCTACGGCTACTACTCCGGTGGCTGGGGCGGCTACAACGGTGGCACTCGCACTTCCCTTGAGCTCAGCCTCAACTCCTACGGCTACAACACCACCAATTACTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001763 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0009933 GO:0009987 GO:0010014 GO:0010016 GO:0010223 GO:0010346 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019827 GO:0022412 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048507 GO:0048532 GO:0048608 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0080166 GO:0090506 GO:0090567 GO:0098727 GO:0099402 GO:0140110 GO:1903506 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox

Protein Analysis

291

Amino Acids

32.33

Weight (kDa)

7.69

Isoelectric Point (pI)

48.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Homeodomain	PF00046	31 - 91	6e-12	Homeodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000152)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17950
fragaria_vesca	FvH4_1g11910 FvH4_3g04400
malus_domestica	MD02G1133000.v1.1 MD15G1245600.v1.1
prunus_persica	Prupe.7G167700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0314921 RchiOBHm_Chr1g0319941 RchiOBHm_Chr1g0321251 RchiOBHm_Chr1g0323021 RchiOBHm_Chr1g0324491 RchiOBHm_Chr1g0325171 RchiOBHm_Chr1g0360601 RchiOBHm_Chr1g0365451 RchiOBHm_Chr1g0381201 RchiOBHm_Chr2g0085401 RchiOBHm_Chr2g0099501 RchiOBHm_Chr2g0106981 RchiOBHm_Chr2g0130271 RchiOBHm_Chr2g0155121 RchiOBHm_Chr3g0455971 RchiOBHm_Chr3g0459501 RchiOBHm_Chr3g0478111 RchiOBHm_Chr3g0480661 RchiOBHm_Chr4g0388561 RchiOBHm_Chr4g0394421 RchiOBHm_Chr4g0424371 RchiOBHm_Chr5g0028631 RchiOBHm_Chr5g0069751 RchiOBHm_Chr5g0076691 RchiOBHm_Chr5g0076711 RchiOBHm_Chr5g0076721 RchiOBHm_Chr5g0079671 RchiOBHm_Chr5g0079731 RchiOBHm_Chr5g0079911 RchiOBHm_Chr5g0081741 RchiOBHm_Chr6g0255231 RchiOBHm_Chr6g0283251 RchiOBHm_Chr6g0300091 RchiOBHm_Chr7g0190751 RchiOBHm_Chr7g0240241
rosa_multiflora	Rmu_co8441375.1_g000001 Rmu_sc0000110.1_g000027 Rmu_sc0000187.1_g000008 Rmu_sc0000240.1_g000065 Rmu_sc0000251.1_g000004 Rmu_sc0000272.1_g000025 Rmu_sc0000276.1_g000074 Rmu_sc0000284.1_g000010 Rmu_sc0000285.1_g000021 Rmu_sc0000360.1_g000034 Rmu_sc0000365.1_g000038 Rmu_sc0000368.1_g000013 Rmu_sc0000368.1_g000025 Rmu_sc0000770.1_g000044 Rmu_sc0000770.1_g000052 Rmu_sc0000795.1_g000098 Rmu_sc0000945.1_g000037 Rmu_sc0000949.1_g000023 Rmu_sc0000982.1_g000002 Rmu_sc0001424.1_g000004 Rmu_sc0001775.1_g000004 Rmu_sc0001952.1_g000010 Rmu_sc0002080.1_g000046 Rmu_sc0002141.1_g000016 Rmu_sc0002183.1_g000004 Rmu_sc0002187.1_g000040 Rmu_sc0002263.1_g000057 Rmu_sc0002351.1_g000061 Rmu_sc0002542.1_g000017 Rmu_sc0002751.1_g000003 Rmu_sc0002792.1_g000029 Rmu_sc0002798.1_g000020 Rmu_sc0002985.1_g000010 Rmu_sc0003124.1_g000019 Rmu_sc0003207.1_g000019 Rmu_sc0003237.1_g000003 Rmu_sc0003363.1_g000050 Rmu_sc0003443.1_g000025 Rmu_sc0003465.1_g000032 Rmu_sc0003500.1_g000012 Rmu_sc0003809.1_g000026 Rmu_sc0003859.1_g000032 Rmu_sc0004085.1_g000003 Rmu_sc0004085.1_g000008 Rmu_sc0004571.1_g000019 Rmu_sc0004753.1_g000006 Rmu_sc0004865.1_g000017 Rmu_sc0004881.1_g000007 Rmu_sc0005697.1_g000023 Rmu_sc0005812.1_g000020 Rmu_sc0007076.1_g000001 Rmu_sc0007801.1_g000003 Rmu_sc0008355.1_g000007 Rmu_sc0009380.1_g000006 Rmu_sc0010191.1_g000004 Rmu_sc0010252.1_g000006 Rmu_sc0011026.1_g000001 Rmu_sc0011824.1_g000003 Rmu_sc0012533.1_g000006 Rmu_sc0012640.1_g000006 Rmu_sc0014032.1_g000001 Rmu_sc0014545.1_g000001 Rmu_sc0014840.1_g000008 Rmu_sc0015060.1_g000013 Rmu_sc0018122.1_g000003 Rmu_sc0026563.1_g000004 Rmu_ssc0000213.1_g000057 Rmu_ssc0000213.1_g000091 Rmu_ssc0000262.1_g000021 Rmu_ssc0000282.1_g000021 Rmu_ssc0000295.1_g000041 Rmu_ssc0000438.1_g000002 Rmu_ssc0000472.1_g000015
rosa_roxburghii	Rroxscaffold_1G00020080 Rroxscaffold_2G00084980 Rroxscaffold_2G00143020 Rroxscaffold_3G00261750 Rroxscaffold_3G00268610 Rroxscaffold_4G00312950 Rroxscaffold_7G00156650 Rroxscaffold_7G00215160
rosa_rugosa	Rorug01G0077100 Rorug01G0201100 Rorug01G0246900 Rorug01G0256600 Rorug02G0080200 Rorug02G0089300 Rorug02G0090700 Rorug02G0177200 Rorug02G0187000 Rorug02G0192600 Rorug02G0232700 Rorug02G0262100 Rorug02G0328300 Rorug02G0408300 Rorug02G0641200 Rorug03G0155000 Rorug03G0185500 Rorug03G0256500 Rorug03G0291000 Rorug03G0299400 Rorug03G0317000 Rorug03G0326700 Rorug03G0330800 Rorug03G0339700 Rorug03G0352900 Rorug04G0029800 Rorug04G0029900 Rorug04G0048100 Rorug04G0075800 Rorug04G0124400 Rorug04G0212100 Rorug04G0212400 Rorug04G0253200 Rorug05G0116700 Rorug05G0146500 Rorug05G0211900 Rorug05G0215700 Rorug05G0216100 Rorug05G0220500 Rorug05G0339400 Rorug05G0352000 Rorug05G0356500.1 Rorug05G0398900 Rorug05G0474700 Rorug05G0511400 Rorug05G0540200 Rorug05G0541000 Rorug05G0572900.1 Rorug05G0584000 Rorug06G0000900 Rorug06G0014600 Rorug06G0018800 Rorug06G0026100 Rorug06G0042900 Rorug06G0082600 Rorug06G0133900 Rorug06G0229100 Rorug07G0321400 Rorug07G0326400 Rorug07G0326600.1
rosa_wichuraiana	Rw0G017710 Rw1G012170 Rw1G039350 Rw2G010030 Rw3G024430 Rw5G045720 Rw7G025340 Rw7G040870

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	341
AccB1I	GGYRCC	1 cut(s)	341
AciI	CCGC	1 cut(s)	798
AclI	AACGTT	1 cut(s)	231
AclWI	GGATC	5 cut(s)	194, 369, 490, 555, 568
AfaI	GTAC	6 cut(s)	91, 209, 343, 389, 619, 625
AfiI	CCNNNNNNNGG	3 cut(s)	267, 719, 792
AgsI	TTSAA	3 cut(s)	432, 519, 695
AhlI	ACTAGT	3 cut(s)	539, 614, 620
AjnI	CCWGG	2 cut(s)	92, 684
AluBI	AGCT	4 cut(s)	136, 199, 771, 832
AluI	AGCT	4 cut(s)	136, 199, 771, 832
Alw21I	GWGCWC	1 cut(s)	834
Alw26I	GTCTC	1 cut(s)	197
AlwI	GGATC	5 cut(s)	194, 369, 490, 555, 568
Ama87I	CYCGRG	1 cut(s)	261
AoxI	GGCC	1 cut(s)	258
ApeKI	GCWGC	2 cut(s)	50, 768
Asp700I	GAANNNNTTC	3 cut(s)	281, 541, 699
Asp718I	GGTACC	1 cut(s)	341
AspS9I	GGNCC	2 cut(s)	159, 259
AsuC2I	CCSGG	3 cut(s)	55, 262, 263
AsuHPI	GGTGA	2 cut(s)	674, 734
AvaI	CYCGRG	1 cut(s)	261
AvaII	GGWCC	1 cut(s)	159
AxyI	CCTNAGG	1 cut(s)	357
BaeGI	GKGCMC	1 cut(s)	306
BamHI	GGATCC	1 cut(s)	560
BanI	GGYRCC	1 cut(s)	341
BanII	GRGCYC	1 cut(s)	834
BbsI	GAAGAC	1 cut(s)	752
Bbv12I	GWGCWC	1 cut(s)	834
BbvI	GCAGC	2 cut(s)	62, 780
BccI	CCATC	2 cut(s)	26, 454
BceAI	ACGGC	2 cut(s)	790, 865
BciT130I	CCWGG	2 cut(s)	94, 686
BcnI	CCSGG	3 cut(s)	55, 262, 263
BcoDI	GTCTC	1 cut(s)	197
BcuI	ACTAGT	3 cut(s)	539, 614, 620
BfaI	CTAG	3 cut(s)	540, 615, 621
BfmI	CTRYAG	2 cut(s)	108, 168
BisI	GCNGC	3 cut(s)	51, 769, 799
BlpI	GCTNAGC	1 cut(s)	833
BlsI	GCNGC	3 cut(s)	52, 770, 800
BmcAI	AGTACT	3 cut(s)	389, 619, 625
Bme1390I	CCNGG	5 cut(s)	55, 94, 262, 263, 686
Bme18I	GGWCC	1 cut(s)	159
BmeT110I	CYCGRG	1 cut(s)	261
BmgT120I	GGNCC	2 cut(s)	159, 259
BmiI	GGNNCC	5 cut(s)	6, 161, 245, 343, 562
BmrFI	CCNGG	5 cut(s)	55, 94, 262, 263, 686
BmsI	GCATC	1 cut(s)	422
BpiI	GAAGAC	1 cut(s)	752
BpmI	CTGGAG	2 cut(s)	179, 549
Bpu1102I	GCTNAGC	1 cut(s)	833
BpuEI	CTTGAG	2 cut(s)	113, 848
BpuMI	CCSGG	3 cut(s)	55, 262, 263
BsaBI	GATNNNNATC	1 cut(s)	122
BsaJI	CCNNGG	2 cut(s)	27, 261
BsaWI	WCCGGW	1 cut(s)	785
Bsc4I	CCNNNNNNNGG	3 cut(s)	267, 719, 792
Bse1I	ACTGG	3 cut(s)	245, 439, 532
Bse21I	CCTNAGG	1 cut(s)	357
Bse8I	GATNNNNATC	1 cut(s)	122
BseBI	CCWGG	2 cut(s)	94, 686
BseDI	CCNNGG	2 cut(s)	27, 261
BseGI	GGATG	3 cut(s)	37, 298, 602
BseJI	GATNNNNATC	1 cut(s)	122
BseLI	CCNNNNNNNGG	3 cut(s)	267, 719, 792
BseMII	CTCAG	2 cut(s)	348, 847
BseNI	ACTGG	3 cut(s)	245, 439, 532
BseRI	GAGGAG	1 cut(s)	589
BseSI	GKGCMC	1 cut(s)	306
BseXI	GCAGC	2 cut(s)	62, 780
BseYI	CCCAGC	2 cut(s)	15, 792
BshFI	GGCC	1 cut(s)	260
BshNI	GGYRCC	1 cut(s)	341
BsiHKAI	GWGCWC	1 cut(s)	834
BsiHKCI	CYCGRG	1 cut(s)	261
BsiSI	CCGG	3 cut(s)	54, 262, 786
BslFI	GGGAC	1 cut(s)	145
BslI	CCNNNNNNNGG	3 cut(s)	267, 719, 792
BsmAI	GTCTC	1 cut(s)	197
BsmFI	GGGAC	1 cut(s)	145
BsnI	GGCC	1 cut(s)	260
BsoBI	CYCGRG	1 cut(s)	261
Bsp1286I	GDGCHC	2 cut(s)	306, 834
Bsp143I	GATC	7 cut(s)	112, 186, 314, 361, 482, 560, 679
Bsp1720I	GCTNAGC	1 cut(s)	833
BspACI	CCGC	1 cut(s)	798
BspANI	GGCC	1 cut(s)	260
BspCNI	CTCAG	2 cut(s)	349, 846
BspLI	GGNNCC	5 cut(s)	6, 161, 245, 343, 562
BspMAI	CTGCAG	1 cut(s)	172
BspPI	GGATC	5 cut(s)	194, 369, 490, 555, 568
BspT107I	GGYRCC	1 cut(s)	341
BsrI	ACTGG	3 cut(s)	245, 439, 532
BssECI	CCNNGG	2 cut(s)	27, 261
BssMI	GATC	7 cut(s)	112, 186, 314, 361, 482, 560, 679
Bst2UI	CCWGG	2 cut(s)	94, 686
Bst4CI	ACNGT	3 cut(s)	207, 722, 809
Bst6I	CTCTTC	2 cut(s)	272, 494
BstC8I	GCNNGC	1 cut(s)	80
BstDEI	CTNAG	2 cut(s)	357, 833
BstF5I	GGATG	3 cut(s)	37, 298, 602
BstKTI	GATC	7 cut(s)	115, 189, 317, 364, 485, 563, 682
BstMAI	GTCTC	1 cut(s)	197
BstMBI	GATC	7 cut(s)	112, 186, 314, 361, 482, 560, 679
BstMWI	GCNNNNNNNGC	4 cut(s)	79, 84, 774, 798
BstNI	CCWGG	2 cut(s)	94, 686
BstNSI	RCATGY	1 cut(s)	73
BstSCI	CCNGG	5 cut(s)	53, 92, 260, 261, 684
BstSFI	CTRYAG	2 cut(s)	108, 168
BstSLI	GKGCMC	1 cut(s)	306
BstV1I	GCAGC	2 cut(s)	62, 780
BstV2I	GAAGAC	1 cut(s)	752
BstX2I	RGATCY	3 cut(s)	186, 482, 560
BstYI	RGATCY	3 cut(s)	186, 482, 560
Bsu36I	CCTNAGG	1 cut(s)	357
BsuRI	GGCC	1 cut(s)	260
BtsCI	GGATG	3 cut(s)	37, 298, 602
Cac8I	GCNNGC	1 cut(s)	80
Cfr13I	GGNCC	2 cut(s)	159, 259
Cfr9I	CCCGGG	1 cut(s)	261
CsiI	ACCWGGT	1 cut(s)	92
Csp6I	GTAC	6 cut(s)	90, 208, 342, 388, 618, 624
CviAII	CATG	9 cut(s)	70, 299, 307, 376, 493, 640, 661, 715, 742
CviQI	GTAC	6 cut(s)	90, 208, 342, 388, 618, 624
DdeI	CTNAG	2 cut(s)	357, 833
DpnI	GATC	7 cut(s)	114, 188, 316, 363, 484, 562, 681
DpnII	GATC	7 cut(s)	112, 186, 314, 361, 482, 560, 679
Eam1104I	CTCTTC	2 cut(s)	272, 494
EarI	CTCTTC	2 cut(s)	272, 494
Ecl136II	GAGCTC	1 cut(s)	832
Eco24I	GRGCYC	1 cut(s)	834
Eco47I	GGWCC	1 cut(s)	159
Eco53kI	GAGCTC	1 cut(s)	832
Eco81I	CCTNAGG	1 cut(s)	357
Eco88I	CYCGRG	1 cut(s)	261
EcoICRI	GAGCTC	1 cut(s)	832
EcoO109I	RGGNCCY	1 cut(s)	159
EcoRII	CCWGG	2 cut(s)	92, 684
EcoT38I	GRGCYC	1 cut(s)	834
FaeI	CATG	9 cut(s)	73, 302, 310, 379, 496, 643, 664, 718, 745
FaqI	GGGAC	1 cut(s)	145
FatI	CATG	9 cut(s)	69, 298, 306, 375, 492, 639, 660, 714, 741
Fnu4HI	GCNGC	3 cut(s)	51, 769, 799
FokI	GGATG	3 cut(s)	44, 305, 589
FriOI	GRGCYC	1 cut(s)	834
Fsp4HI	GCNGC	3 cut(s)	51, 769, 799
FspBI	CTAG	3 cut(s)	540, 615, 621
GluI	GCNGC	3 cut(s)	51, 769, 799
GsaI	CCCAGC	2 cut(s)	19, 796
GsuI	CTGGAG	2 cut(s)	179, 549
HaeIII	GGCC	1 cut(s)	260
HapII	CCGG	3 cut(s)	54, 262, 786
Hin1II	CATG	9 cut(s)	73, 302, 310, 379, 496, 643, 664, 718, 745
HinfI	GANTC	3 cut(s)	100, 123, 178
HpaII	CCGG	3 cut(s)	54, 262, 786
HphI	GGTGA	2 cut(s)	674, 734
Hpy166II	GTNNAC	2 cut(s)	99, 285
Hpy188I	TCNGA	4 cut(s)	117, 183, 292, 757
Hpy188III	TCNNGA	1 cut(s)	247
Hpy8I	GTNNAC	2 cut(s)	99, 285
HpyAV	CCTTC	2 cut(s)	710, 752
HpyCH4III	ACNGT	3 cut(s)	207, 722, 809
HpyCH4IV	ACGT	1 cut(s)	231
HpyCH4V	TGCA	5 cut(s)	78, 170, 310, 413, 718
HpyF10VI	GCNNNNNNNGC	4 cut(s)	79, 84, 774, 798
HpyF3I	CTNAG	2 cut(s)	357, 833
HpySE526I	ACGT	1 cut(s)	231
Hsp92II	CATG	9 cut(s)	73, 302, 310, 379, 496, 643, 664, 718, 745
KpnI	GGTACC	1 cut(s)	345
Kzo9I	GATC	7 cut(s)	112, 186, 314, 361, 482, 560, 679
LmnI	GCTCC	1 cut(s)	133
Lsp1109I	GCAGC	2 cut(s)	62, 780
LweI	GCATC	1 cut(s)	422
MabI	ACCWGGT	1 cut(s)	92
MaeI	CTAG	3 cut(s)	540, 615, 621
MaeII	ACGT	1 cut(s)	231
MaeIII	GTNAC	1 cut(s)	569
MalI	GATC	7 cut(s)	114, 188, 316, 363, 484, 562, 681
MboI	GATC	7 cut(s)	112, 186, 314, 361, 482, 560, 679
MboII	GAAGA	8 cut(s)	286, 289, 399, 420, 511, 659, 689, 757
MfeI	CAATTG	1 cut(s)	346
MflI	RGATCY	3 cut(s)	186, 482, 560
MhlI	GDGCHC	2 cut(s)	306, 834
MluCI	AATT	3 cut(s)	346, 574, 865
MlyI	GAGTC	1 cut(s)	94
MroXI	GAANNNNTTC	3 cut(s)	281, 541, 699
MseI	TTAA	2 cut(s)	372, 450
MspA1I	CMGCKG	1 cut(s)	199
MspI	CCGG	3 cut(s)	54, 262, 786
MspR9I	CCNGG	5 cut(s)	55, 94, 262, 263, 686
MunI	CAATTG	1 cut(s)	346
MvaI	CCWGG	2 cut(s)	94, 686
MwoI	GCNNNNNNNGC	4 cut(s)	79, 84, 774, 798
NciI	CCSGG	3 cut(s)	55, 262, 263
NdeII	GATC	7 cut(s)	112, 186, 314, 361, 482, 560, 679
NlaIII	CATG	9 cut(s)	73, 302, 310, 379, 496, 643, 664, 718, 745
NlaIV	GGNNCC	5 cut(s)	6, 161, 245, 343, 562
NmuCI	GTSAC	1 cut(s)	569
NspI	RCATGY	1 cut(s)	73
PdmI	GAANNNNTTC	3 cut(s)	281, 541, 699
PfeI	GAWTC	2 cut(s)	123, 178
PkrI	GCNGC	3 cut(s)	52, 770, 800
PleI	GAGTC	1 cut(s)	94
PpsI	GAGTC	1 cut(s)	94
PpuMI	RGGWCCY	1 cut(s)	159
Psp124BI	GAGCTC	1 cut(s)	834
Psp1406I	AACGTT	1 cut(s)	231
Psp5II	RGGWCCY	1 cut(s)	159
Psp6I	CCWGG	2 cut(s)	92, 684
PspFI	CCCAGC	2 cut(s)	15, 792
PspGI	CCWGG	2 cut(s)	92, 684
PspN4I	GGNNCC	5 cut(s)	6, 161, 245, 343, 562
PspPI	GGNCC	2 cut(s)	159, 259
PspPPI	RGGWCCY	1 cut(s)	159
PsrI	GAACNNNNNNTAC	4 cut(s)	221, 253, 371, 403
PstI	CTGCAG	1 cut(s)	172
PsuI	RGATCY	3 cut(s)	186, 482, 560
PvuII	CAGCTG	1 cut(s)	199
RsaI	GTAC	6 cut(s)	91, 209, 343, 389, 619, 625
RsaNI	GTAC	6 cut(s)	90, 208, 342, 388, 618, 624
SacI	GAGCTC	1 cut(s)	834
SaqAI	TTAA	2 cut(s)	372, 450
SatI	GCNGC	3 cut(s)	51, 769, 799
Sau3AI	GATC	7 cut(s)	112, 186, 314, 361, 482, 560, 679
Sau96I	GGNCC	2 cut(s)	159, 259
ScaI	AGTACT	3 cut(s)	389, 619, 625
SchI	GAGTC	1 cut(s)	94
ScrFI	CCNGG	5 cut(s)	55, 94, 262, 263, 686
SduI	GDGCHC	2 cut(s)	306, 834
SexAI	ACCWGGT	1 cut(s)	92
SfaNI	GCATC	1 cut(s)	422
SfcI	CTRYAG	2 cut(s)	108, 168
SinI	GGWCC	1 cut(s)	159
SmaI	CCCGGG	1 cut(s)	263
SmlI	CTYRAG	2 cut(s)	128, 827
SmoI	CTYRAG	2 cut(s)	128, 827
SpeI	ACTAGT	3 cut(s)	539, 614, 620
Sse9I	AATT	3 cut(s)	346, 574, 865
SsiI	CCGC	1 cut(s)	798
SspMI	CTAG	3 cut(s)	540, 615, 621
SstI	GAGCTC	1 cut(s)	834
StyD4I	CCNGG	5 cut(s)	53, 92, 260, 261, 684
TaaI	ACNGT	3 cut(s)	207, 722, 809
TaiI	ACGT	1 cut(s)	234
TasI	AATT	3 cut(s)	346, 574, 865
TatI	WGTACW	3 cut(s)	387, 617, 623
TauI	GCSGC	1 cut(s)	801
TfiI	GAWTC	2 cut(s)	123, 178
Tru1I	TTAA	2 cut(s)	372, 450
Tru9I	TTAA	2 cut(s)	372, 450
TseFI	GTSAC	1 cut(s)	569
TseI	GCWGC	2 cut(s)	50, 768
Tsp45I	GTSAC	1 cut(s)	569
TspDTI	ATGAA	7 cut(s)	287, 392, 503, 649, 656, 660, 758
TspGWI	ACGGA	1 cut(s)	225
TspMI	CCCGGG	1 cut(s)	261
VpaK11BI	GGWCC	1 cut(s)	159
XceI	RCATGY	1 cut(s)	73
XmaI	CCCGGG	1 cut(s)	261
XmnI	GAANNNNTTC	3 cut(s)	281, 541, 699
XspI	CTAG	3 cut(s)	540, 615, 621
ZrmI	AGTACT	3 cut(s)	389, 619, 625

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.