Rorug05G0474700

Homeodomain

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
65201390 .. 65213202
11813 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0474700.1

Sequence Viewer

Length: 1452 bp
ATGCAACTTTTCTCATCATCACCTCCTTTCTGTGCAGCTCTGCACTCAGACTTTGGTCTCGTCCTGATACCAATCCTCGTGCTCTTGGGCTTGTTCGTCCTCCAATGGCGGCACCCGAGATTCCACAGGCGCCTTCCCCCTGGCTCAATGGGTTGGCCTTATTTCGGAGAGACTTTCGAGCTCTACACTGAAAACCCAAATTCCTTCTTCACGGTCCGGCAAAAACGGTATGGGAGTATATTCAAGACCCATGTTTTGGGGTGTCCATGTGTGATGATAACAAGTCCAGAAGCAGCAAAAATGGTACTGGTGAGTCGGGCTCATCTGTTTAAGCCGACTTACCCCAGAGGCAAAGAGAGGATGATAGGACCGGAGGCTATATTCTTTCACCAAGGAGCCTATCACTCAAAGCTAAAGAAGCTGGTTCAGGCTTCACTTCTGCCCTCTGCAATAAAAGGTTCAGTCTCAGAGATTGAGCAAATTGTTCTAAGCCTACTGCCCACATGGAAGAACAACACCATTAACACTTTGCAAGAGATGAAGAGGTATGCTTTTGATGTGGCAATGATTTCAGTTTTGGGCAACAAAAGGGAAATTGAAGTGGAAGGGATTAAACATCTGTATCATTCCATTGAGAAGGGCTATAATTCCATGGCTCTTGATCTACCTGGAACTCCCTTTCACAAAGCCATGAACGCAAGGAAGCTTCTGAATAAGGCATTGAGAGGACTGATACAAAAGAGAAGGGAGAGTGGTGATGCACAAAGTGGTGGATTGCTTCAAGAACTGTTGAGAGCAAAAGATCAGAAACTTAATCTGAACCTCAGTGATTCTCAAATTGCTGATAATATCATCGGGGTTATCTTTGCTGCTCATGATACCACTGCTAGCGTTCTAACATGGCTCCTGAAGTATCTTCATGACAATGACGATCTCCTAGAATCTGTTACGAGAGAACAAGAAGGAATTCAACGCAAAATGTTGAATGAGAAACGCGGGTTTACGTGGGATGATACTAGACGCATGCCTTTGACTAATCGGGTGATTCAAGAGACTCTAAGAACAGCAAGTATACTGTCATTCACATTCAGAGAGGCAGTGGAAGACGTAGAGTTTGAGGGTTACTTTATCCCTAGAGGTTGGAAGGTGCTGCCTCTTTTCAGAAGCATTCATCACTGTGCAGATTTCTTCCCTCAGCCTGAAAAGTTTGACCCTTCAAGATTTGAGGTTCCACCTCGACCCAACACTTACATGCCCTTTGGGAATGGCGTGCATTCCTGTCCAGGCAATGAGCTGGCCAAGTTTGAGATGCTGATCCTCCTTCACCACCTCACAACTACTTACAGGTGGCACCTGATGGGCGATGACGATGGGATTCAGTATGGCCCTTTCCCAGTTCCCAAACAGGGATTACCCATCAAAGTGACTCTGAGGAACAAGAATAGGACCTGA

Protein Analysis

483

Amino Acids

55.27

Weight (kDa)

9.4

Isoelectric Point (pI)

48.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 46 - 456 2e-70 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000152)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G17950
fragaria_vesca FvH4_1g11910 FvH4_3g04400
malus_domestica MD02G1133000.v1.1 MD15G1245600.v1.1
prunus_persica Prupe.7G167700_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0314921 RchiOBHm_Chr1g0319941 RchiOBHm_Chr1g0321251 RchiOBHm_Chr1g0323021 RchiOBHm_Chr1g0324491 RchiOBHm_Chr1g0325171 RchiOBHm_Chr1g0360601 RchiOBHm_Chr1g0365451 RchiOBHm_Chr1g0381201 RchiOBHm_Chr2g0085401 RchiOBHm_Chr2g0099501 RchiOBHm_Chr2g0106981 RchiOBHm_Chr2g0130271 RchiOBHm_Chr2g0155121 RchiOBHm_Chr3g0455971 RchiOBHm_Chr3g0459501 RchiOBHm_Chr3g0478111 RchiOBHm_Chr3g0480661 RchiOBHm_Chr4g0388561 RchiOBHm_Chr4g0394421 RchiOBHm_Chr4g0424371 RchiOBHm_Chr5g0028631 RchiOBHm_Chr5g0069751 RchiOBHm_Chr5g0076691 RchiOBHm_Chr5g0076711 RchiOBHm_Chr5g0076721 RchiOBHm_Chr5g0079671 RchiOBHm_Chr5g0079731 RchiOBHm_Chr5g0079911 RchiOBHm_Chr5g0081741 RchiOBHm_Chr6g0255231 RchiOBHm_Chr6g0283251 RchiOBHm_Chr6g0300091 RchiOBHm_Chr7g0190751 RchiOBHm_Chr7g0240241
rosa_multiflora Rmu_co8441375.1_g000001 Rmu_sc0000110.1_g000027 Rmu_sc0000187.1_g000008 Rmu_sc0000240.1_g000065 Rmu_sc0000251.1_g000004 Rmu_sc0000272.1_g000025 Rmu_sc0000276.1_g000074 Rmu_sc0000284.1_g000010 Rmu_sc0000285.1_g000021 Rmu_sc0000360.1_g000034 Rmu_sc0000365.1_g000038 Rmu_sc0000368.1_g000013 Rmu_sc0000368.1_g000025 Rmu_sc0000770.1_g000044 Rmu_sc0000770.1_g000052 Rmu_sc0000795.1_g000098 Rmu_sc0000945.1_g000037 Rmu_sc0000949.1_g000023 Rmu_sc0000982.1_g000002 Rmu_sc0001424.1_g000004 Rmu_sc0001775.1_g000004 Rmu_sc0001952.1_g000010 Rmu_sc0002080.1_g000046 Rmu_sc0002141.1_g000016 Rmu_sc0002183.1_g000004 Rmu_sc0002187.1_g000040 Rmu_sc0002263.1_g000057 Rmu_sc0002351.1_g000061 Rmu_sc0002542.1_g000017 Rmu_sc0002751.1_g000003 Rmu_sc0002792.1_g000029 Rmu_sc0002798.1_g000020 Rmu_sc0002985.1_g000010 Rmu_sc0003124.1_g000019 Rmu_sc0003207.1_g000019 Rmu_sc0003237.1_g000003 Rmu_sc0003363.1_g000050 Rmu_sc0003443.1_g000025 Rmu_sc0003465.1_g000032 Rmu_sc0003500.1_g000012 Rmu_sc0003809.1_g000026 Rmu_sc0003859.1_g000032 Rmu_sc0004085.1_g000003 Rmu_sc0004085.1_g000008 Rmu_sc0004571.1_g000019 Rmu_sc0004753.1_g000006 Rmu_sc0004865.1_g000017 Rmu_sc0004881.1_g000007 Rmu_sc0005697.1_g000023 Rmu_sc0005812.1_g000020 Rmu_sc0007076.1_g000001 Rmu_sc0007801.1_g000003 Rmu_sc0008355.1_g000007 Rmu_sc0009380.1_g000006 Rmu_sc0010191.1_g000004 Rmu_sc0010252.1_g000006 Rmu_sc0011026.1_g000001 Rmu_sc0011824.1_g000003 Rmu_sc0012533.1_g000006 Rmu_sc0012640.1_g000006 Rmu_sc0014032.1_g000001 Rmu_sc0014545.1_g000001 Rmu_sc0014840.1_g000008 Rmu_sc0015060.1_g000013 Rmu_sc0018122.1_g000003 Rmu_sc0026563.1_g000004 Rmu_ssc0000213.1_g000057 Rmu_ssc0000213.1_g000091 Rmu_ssc0000262.1_g000021 Rmu_ssc0000282.1_g000021 Rmu_ssc0000295.1_g000041 Rmu_ssc0000438.1_g000002 Rmu_ssc0000472.1_g000015
rosa_roxburghii Rroxscaffold_1G00020080 Rroxscaffold_2G00084980 Rroxscaffold_2G00143020 Rroxscaffold_3G00261750 Rroxscaffold_3G00268610 Rroxscaffold_4G00312950 Rroxscaffold_7G00156650 Rroxscaffold_7G00215160
rosa_rugosa Rorug01G0077100 Rorug01G0201100 Rorug01G0246900 Rorug01G0256600 Rorug02G0080200 Rorug02G0089300 Rorug02G0090700 Rorug02G0177200 Rorug02G0187000 Rorug02G0192600 Rorug02G0232700 Rorug02G0262100 Rorug02G0328300 Rorug02G0408300 Rorug02G0641200 Rorug03G0155000 Rorug03G0185500 Rorug03G0256500 Rorug03G0291000 Rorug03G0299400 Rorug03G0317000 Rorug03G0326700 Rorug03G0330800 Rorug03G0339700 Rorug03G0352900 Rorug04G0029800 Rorug04G0029900 Rorug04G0048100 Rorug04G0075800 Rorug04G0124400 Rorug04G0212100 Rorug04G0212400 Rorug04G0253200 Rorug05G0116700 Rorug05G0146500 Rorug05G0211900 Rorug05G0215700 Rorug05G0216100 Rorug05G0220500 Rorug05G0339400 Rorug05G0352000 Rorug05G0356500.1 Rorug05G0398900 Rorug05G0474700 Rorug05G0511400 Rorug05G0540200 Rorug05G0541000 Rorug05G0572900.1 Rorug05G0584000 Rorug06G0000900 Rorug06G0014600 Rorug06G0018800 Rorug06G0026100 Rorug06G0042900 Rorug06G0082600 Rorug06G0133900 Rorug06G0229100 Rorug07G0321400 Rorug07G0326400 Rorug07G0326600.1
rosa_wichuraiana Rw0G017710 Rw1G012170 Rw1G039350 Rw2G010030 Rw3G024430 Rw5G045720 Rw7G025340 Rw7G040870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 111, 129, 1350
AccB7I CCANNNNNTGG 1 cut(s) 256
AccI GTMKAC 1 cut(s) 1072
AccII CGCG 1 cut(s) 996
AciI CCGC 2 cut(s) 109, 996
AclWI GGATC 1 cut(s) 1309
AcoI YGGCCR 1 cut(s) 1296
AcsI RAATTY 2 cut(s) 199, 966
AcuI CTGAAG 1 cut(s) 929
AcyI GRCGYC 1 cut(s) 130
AdeI CACNNNGTG 1 cut(s) 767
AfaI GTAC 1 cut(s) 306
AfiI CCNNNNNNNGG 3 cut(s) 164, 256, 1406
AgsI TTSAA 7 cut(s) 244, 599, 782, 971, 985, 1049, 1218
AjnI CCWGG 3 cut(s) 139, 667, 1282
AluBI AGCT 6 cut(s) 38, 181, 412, 421, 706, 1294
AluI AGCT 6 cut(s) 38, 181, 412, 421, 706, 1294
Alw21I GWGCWC 2 cut(s) 84, 183
Alw26I GTCTC 4 cut(s) 62, 164, 469, 1046
AlwI GGATC 1 cut(s) 1309
Ama87I CYCGRG 1 cut(s) 115
AoxI GGCC 3 cut(s) 155, 1296, 1384
ApeKI GCWGC 4 cut(s) 35, 293, 869, 1150
ApoI RAATTY 2 cut(s) 199, 966
ArsI GACNNNNNNTTYG 4 cut(s) 238, 270, 1097, 1129
Asp700I GAANNNNTTC 1 cut(s) 966
AspLEI GCGC 1 cut(s) 132
AspS9I GGNCC 4 cut(s) 214, 368, 1385, 1446
AsuHPI GGTGA 6 cut(s) 12, 322, 380, 767, 1054, 1316
AsuNHI GCTAGC 1 cut(s) 887
AvaI CYCGRG 1 cut(s) 115
AvaII GGWCC 3 cut(s) 214, 368, 1446
BaeI ACNNNNGTAYC 2 cut(s) 605, 638
BalI TGGCCA 1 cut(s) 1298
BanI GGYRCC 3 cut(s) 111, 129, 1350
BanII GRGCYC 2 cut(s) 183, 322
BauI CACGAG 1 cut(s) 77
BbsI GAAGAC 1 cut(s) 1110
Bbv12I GWGCWC 2 cut(s) 84, 183
BbvCI CCTCAGC 1 cut(s) 1194
BbvI GCAGC 4 cut(s) 47, 305, 856, 1137
BccI CCATC 3 cut(s) 1351, 1364, 1424
BciT130I CCWGG 3 cut(s) 141, 669, 1284
BcoDI GTCTC 4 cut(s) 62, 164, 469, 1046
BfaI CTAG 4 cut(s) 888, 938, 1017, 1134
BfoI RGCGCY 1 cut(s) 133
BisI GCNGC 5 cut(s) 36, 110, 294, 870, 1151
BlsI GCNGC 5 cut(s) 37, 111, 295, 871, 1152
Bme1390I CCNGG 3 cut(s) 141, 669, 1284
Bme18I GGWCC 3 cut(s) 214, 368, 1446
BmeT110I CYCGRG 1 cut(s) 115
BmgT120I GGNCC 4 cut(s) 214, 368, 1385, 1446
BmiI GGNNCC 6 cut(s) 113, 131, 397, 905, 1230, 1352
BmrFI CCNGG 3 cut(s) 141, 669, 1284
BmrI ACTGGG 1 cut(s) 1388
BmsI GCATC 2 cut(s) 748, 1299
BmtI GCTAGC 1 cut(s) 891
BmuI ACTGGG 1 cut(s) 1388
BoxI GACNNNNGTC 1 cut(s) 54
BpiI GAAGAC 1 cut(s) 1110
BplI GAGNNNNNCTC 2 cut(s) 304, 336
Bpu10I CCTNAGC 1 cut(s) 1194
BsaAI YACGTR 1 cut(s) 1005
BsaBI GATNNNNATC 2 cut(s) 71, 1313
BsaHI GRCGYC 1 cut(s) 130
BsaI GGTCTC 1 cut(s) 62
BsaJI CCNNGG 3 cut(s) 139, 391, 651
BsaWI WCCGGW 1 cut(s) 370
Bsc4I CCNNNNNNNGG 3 cut(s) 164, 256, 1406
Bse1I ACTGG 2 cut(s) 312, 1394
Bse3DI GCAATG 2 cut(s) 570, 1294
Bse8I GATNNNNATC 2 cut(s) 71, 1313
BseBI CCWGG 3 cut(s) 141, 669, 1284
BseDI CCNNGG 3 cut(s) 139, 391, 651
BseGI GGATG 2 cut(s) 366, 1015
BseJI GATNNNNATC 2 cut(s) 71, 1313
BseLI CCNNNNNNNGG 3 cut(s) 164, 256, 1406
BseMI GCAATG 2 cut(s) 570, 1294
BseMII CTCAG 5 cut(s) 60, 480, 838, 1208, 1421
BseNI ACTGG 2 cut(s) 312, 1394
BseXI GCAGC 4 cut(s) 47, 305, 856, 1137
BsgI GTGCAG 3 cut(s) 26, 54, 1200
Bsh1236I CGCG 1 cut(s) 996
BshFI GGCC 3 cut(s) 157, 1298, 1386
BshNI GGYRCC 3 cut(s) 111, 129, 1350
BsiHKAI GWGCWC 2 cut(s) 84, 183
BsiHKCI CYCGRG 1 cut(s) 115
BsiSI CCGG 2 cut(s) 217, 371
BslI CCNNNNNNNGG 3 cut(s) 164, 256, 1406
BsmAI GTCTC 4 cut(s) 62, 164, 469, 1046
BsmI GAATGC 2 cut(s) 1167, 1273
BsnI GGCC 3 cut(s) 157, 1298, 1386
Bso31I GGTCTC 1 cut(s) 62
BsoBI CYCGRG 1 cut(s) 115
Bsp1286I GDGCHC 3 cut(s) 84, 183, 322
Bsp143I GATC 4 cut(s) 661, 802, 931, 1314
Bsp19I CCATGG 1 cut(s) 651
BspACI CCGC 2 cut(s) 109, 996
BspANI GGCC 3 cut(s) 157, 1298, 1386
BspCNI CTCAG 5 cut(s) 59, 479, 837, 1207, 1422
BspFNI CGCG 1 cut(s) 996
BspHI TCATGA 2 cut(s) 874, 919
BspLI GGNNCC 6 cut(s) 113, 131, 397, 905, 1230, 1352
BspOI GCTAGC 1 cut(s) 891
BspPI GGATC 1 cut(s) 1309
BspT107I GGYRCC 3 cut(s) 111, 129, 1350
BspTNI GGTCTC 1 cut(s) 62
BsrDI GCAATG 2 cut(s) 570, 1294
BsrI ACTGG 2 cut(s) 312, 1394
BssECI CCNNGG 3 cut(s) 139, 391, 651
BssMI GATC 4 cut(s) 661, 802, 931, 1314
BssNAI GTATAC 1 cut(s) 1073
BssNI GRCGYC 1 cut(s) 130
BssSI CACGAG 1 cut(s) 77
BssT1I CCWWGG 2 cut(s) 391, 651
Bst1107I GTATAC 1 cut(s) 1073
Bst2BI CACGAG 1 cut(s) 77
Bst2UI CCWGG 3 cut(s) 141, 669, 1284
Bst4CI ACNGT 5 cut(s) 214, 228, 789, 1077, 1178
Bst6I CTCTTC 1 cut(s) 536
BstACI GRCGYC 1 cut(s) 130
BstBAI YACGTR 1 cut(s) 1005
BstC8I GCNNGC 4 cut(s) 889, 1025, 1271, 1296
BstDEI CTNAG 7 cut(s) 46, 466, 488, 824, 1058, 1194, 1430
BstDSI CCRYGG 1 cut(s) 651
BstF5I GGATG 2 cut(s) 366, 1015
BstFNI CGCG 1 cut(s) 996
BstH2I RGCGCY 1 cut(s) 133
BstHHI GCGC 1 cut(s) 132
BstKTI GATC 4 cut(s) 664, 805, 934, 1317
BstMAI GTCTC 4 cut(s) 62, 164, 469, 1046
BstMBI GATC 4 cut(s) 661, 802, 931, 1314
BstMWI GCNNNNNNNGC 2 cut(s) 418, 695
BstNI CCWGG 3 cut(s) 141, 669, 1284
BstNSI RCATGY 2 cut(s) 1027, 1255
BstPAI GACNNNNGTC 1 cut(s) 54
BstSCI CCNGG 3 cut(s) 139, 667, 1282
BstUI CGCG 1 cut(s) 996
BstV1I GCAGC 4 cut(s) 47, 305, 856, 1137
BstV2I GAAGAC 1 cut(s) 1110
BstZ17I GTATAC 1 cut(s) 1073
BsuRI GGCC 3 cut(s) 157, 1298, 1386
BtgI CCRYGG 1 cut(s) 651
BtgZI GCGATG 1 cut(s) 1377
BtsCI GGATG 2 cut(s) 366, 1015
BtsI GCAGTG 2 cut(s) 882, 1104
BtsIMutI CAGTG 5 cut(s) 186, 832, 882, 1104, 1174
Cac8I GCNNGC 4 cut(s) 889, 1025, 1271, 1296
CciI TCATGA 2 cut(s) 874, 919
CfoI GCGC 1 cut(s) 132
Cfr13I GGNCC 4 cut(s) 214, 368, 1385, 1446
CpoI CGGWCCG 1 cut(s) 214
CseI GACGC 1 cut(s) 1029
Csp6I GTAC 1 cut(s) 305
CspI CGGWCCG 1 cut(s) 214
CviQI GTAC 1 cut(s) 305
DdeI CTNAG 7 cut(s) 46, 466, 488, 824, 1058, 1194, 1430
DinI GGCGCC 1 cut(s) 131
DpnI GATC 4 cut(s) 663, 804, 933, 1316
DpnII GATC 4 cut(s) 661, 802, 931, 1314
DraIII CACNNNGTG 1 cut(s) 767
EaeI YGGCCR 1 cut(s) 1296
Eam1104I CTCTTC 1 cut(s) 536
EarI CTCTTC 1 cut(s) 536
Ecl136II GAGCTC 1 cut(s) 181
Eco130I CCWWGG 2 cut(s) 391, 651
Eco24I GRGCYC 2 cut(s) 183, 322
Eco31I GGTCTC 1 cut(s) 62
Eco47I GGWCC 3 cut(s) 214, 368, 1446
Eco53kI GAGCTC 1 cut(s) 181
Eco57I CTGAAG 1 cut(s) 929
Eco88I CYCGRG 1 cut(s) 115
EcoICRI GAGCTC 1 cut(s) 181
EcoO109I RGGNCCY 1 cut(s) 1446
EcoRI GAATTC 1 cut(s) 966
EcoRII CCWGG 3 cut(s) 139, 667, 1282
EcoT14I CCWWGG 2 cut(s) 391, 651
EcoT38I GRGCYC 2 cut(s) 183, 322
EgeI GGCGCC 1 cut(s) 131
EheI GGCGCC 1 cut(s) 131
ErhI CCWWGG 2 cut(s) 391, 651
FauI CCCGC 1 cut(s) 989
FblI GTMKAC 1 cut(s) 1072
Fnu4HI GCNGC 5 cut(s) 36, 110, 294, 870, 1151
FokI GGATG 2 cut(s) 373, 1022
FriOI GRGCYC 2 cut(s) 183, 322
Fsp4HI GCNGC 5 cut(s) 36, 110, 294, 870, 1151
FspBI CTAG 4 cut(s) 888, 938, 1017, 1134
GlaI GCGC 1 cut(s) 131
GluI GCNGC 5 cut(s) 36, 110, 294, 870, 1151
HaeII RGCGCY 1 cut(s) 133
HaeIII GGCC 3 cut(s) 157, 1298, 1386
HapII CCGG 2 cut(s) 217, 371
HgaI GACGC 1 cut(s) 1029
HhaI GCGC 1 cut(s) 132
Hin1I GRCGYC 1 cut(s) 130
Hin6I GCGC 1 cut(s) 130
HinP1I GCGC 1 cut(s) 130
HindIII AAGCTT 1 cut(s) 704
HinfI GANTC 8 cut(s) 120, 313, 830, 941, 1045, 1054, 1375, 1426
HpaII CCGG 2 cut(s) 217, 371
HphI GGTGA 6 cut(s) 12, 322, 380, 767, 1054, 1316
Hpy166II GTNNAC 2 cut(s) 1002, 1073
Hpy188I TCNGA 9 cut(s) 49, 167, 469, 711, 807, 819, 1091, 1163, 1431
Hpy8I GTNNAC 2 cut(s) 1002, 1073
HpyAV CCTTC 9 cut(s) 143, 214, 599, 631, 738, 956, 1138, 1224, 1331
HpyCH4III ACNGT 5 cut(s) 214, 228, 789, 1077, 1178
HpyCH4IV ACGT 2 cut(s) 1004, 1107
HpyCH4V TGCA 8 cut(s) 4, 35, 43, 449, 532, 761, 1181, 1273
HpyF10VI GCNNNNNNNGC 2 cut(s) 418, 695
HpyF3I CTNAG 7 cut(s) 46, 466, 488, 824, 1058, 1194, 1430
HpySE526I ACGT 2 cut(s) 1004, 1107
Hsp92I GRCGYC 1 cut(s) 130
HspAI GCGC 1 cut(s) 130
KasI GGCGCC 1 cut(s) 129
Kzo9I GATC 4 cut(s) 661, 802, 931, 1314
LmnI GCTCC 2 cut(s) 395, 909
Lsp1109I GCAGC 4 cut(s) 47, 305, 856, 1137
LweI GCATC 2 cut(s) 748, 1299
MaeI CTAG 4 cut(s) 888, 938, 1017, 1134
MaeII ACGT 2 cut(s) 1004, 1107
MaeIII GTNAC 3 cut(s) 946, 1121, 1423
MalI GATC 4 cut(s) 663, 804, 933, 1316
MboI GATC 4 cut(s) 661, 802, 931, 1314
MboII GAAGA 6 cut(s) 199, 520, 553, 908, 1115, 1180
MhlI GDGCHC 3 cut(s) 84, 183, 322
MlsI TGGCCA 1 cut(s) 1298
MluCI AATT 6 cut(s) 199, 480, 594, 646, 837, 966
MluNI TGGCCA 1 cut(s) 1298
Mly113I GGCGCC 1 cut(s) 130
MlyI GAGTC 3 cut(s) 322, 1048, 1420
MmeI TCCRAC 1 cut(s) 1121
Mox20I TGGCCA 1 cut(s) 1298
MroXI GAANNNNTTC 1 cut(s) 966
MscI TGGCCA 1 cut(s) 1298
MseI TTAA 4 cut(s) 330, 522, 612, 813
MslI CAYNNNNRTG 4 cut(s) 924, 1176, 1250, 1421
Msp20I TGGCCA 1 cut(s) 1298
MspI CCGG 2 cut(s) 217, 371
MspR9I CCNGG 3 cut(s) 141, 669, 1284
Mva1269I GAATGC 2 cut(s) 1167, 1273
MvaI CCWGG 3 cut(s) 141, 669, 1284
MvnI CGCG 1 cut(s) 996
MwoI GCNNNNNNNGC 2 cut(s) 418, 695
NarI GGCGCC 1 cut(s) 130
NcoI CCATGG 1 cut(s) 651
NdeII GATC 4 cut(s) 661, 802, 931, 1314
NheI GCTAGC 1 cut(s) 887
NlaIV GGNNCC 6 cut(s) 113, 131, 397, 905, 1230, 1352
NmuCI GTSAC 1 cut(s) 1423
NspI RCATGY 2 cut(s) 1027, 1255
PaeI GCATGC 1 cut(s) 1027
PagI TCATGA 2 cut(s) 874, 919
PctI GAATGC 2 cut(s) 1167, 1273
PdmI GAANNNNTTC 1 cut(s) 966
PfeI GAWTC 5 cut(s) 120, 830, 941, 1045, 1375
PflMI CCANNNNNTGG 1 cut(s) 256
PkrI GCNGC 5 cut(s) 37, 111, 295, 871, 1152
PleI GAGTC 3 cut(s) 321, 1048, 1420
PluTI GGCGCC 1 cut(s) 133
PpsI GAGTC 3 cut(s) 321, 1048, 1420
Ppu21I YACGTR 1 cut(s) 1005
PpuMI RGGWCCY 1 cut(s) 1446
PshAI GACNNNNGTC 1 cut(s) 54
Psp124BI GAGCTC 1 cut(s) 183
Psp5II RGGWCCY 1 cut(s) 1446
Psp6I CCWGG 3 cut(s) 139, 667, 1282
PspGI CCWGG 3 cut(s) 139, 667, 1282
PspN4I GGNNCC 6 cut(s) 113, 131, 397, 905, 1230, 1352
PspPI GGNCC 4 cut(s) 214, 368, 1385, 1446
PspPPI RGGWCCY 1 cut(s) 1446
RsaI GTAC 1 cut(s) 306
RsaNI GTAC 1 cut(s) 305
RseI CAYNNNNRTG 4 cut(s) 924, 1176, 1250, 1421
Rsr2I CGGWCCG 1 cut(s) 214
RsrII CGGWCCG 1 cut(s) 214
SacI GAGCTC 1 cut(s) 183
SaqAI TTAA 4 cut(s) 330, 522, 612, 813
SatI GCNGC 5 cut(s) 36, 110, 294, 870, 1151
Sau3AI GATC 4 cut(s) 661, 802, 931, 1314
Sau96I GGNCC 4 cut(s) 214, 368, 1385, 1446
SchI GAGTC 3 cut(s) 322, 1048, 1420
ScrFI CCNGG 3 cut(s) 141, 669, 1284
SduI GDGCHC 3 cut(s) 84, 183, 322
SfaNI GCATC 2 cut(s) 748, 1299
SfoI GGCGCC 1 cut(s) 131
SinI GGWCC 3 cut(s) 214, 368, 1446
SmiMI CAYNNNNRTG 4 cut(s) 924, 1176, 1250, 1421
SphI GCATGC 1 cut(s) 1027
Sse9I AATT 6 cut(s) 199, 480, 594, 646, 837, 966
SsiI CCGC 2 cut(s) 109, 996
SspDI GGCGCC 1 cut(s) 129
SspMI CTAG 4 cut(s) 888, 938, 1017, 1134
SstI GAGCTC 1 cut(s) 183
StyD4I CCNGG 3 cut(s) 139, 667, 1282
StyI CCWWGG 2 cut(s) 391, 651
TaaI ACNGT 5 cut(s) 214, 228, 789, 1077, 1178
TaiI ACGT 2 cut(s) 1007, 1110
TaqI TCGA 2 cut(s) 177, 1237
TasI AATT 6 cut(s) 199, 480, 594, 646, 837, 966
TauI GCSGC 1 cut(s) 112
TfiI GAWTC 5 cut(s) 120, 830, 941, 1045, 1375
Tru1I TTAA 4 cut(s) 330, 522, 612, 813
Tru9I TTAA 4 cut(s) 330, 522, 612, 813
TscAI CASTG 5 cut(s) 193, 832, 889, 1104, 1181
TseFI GTSAC 1 cut(s) 1423
TseI GCWGC 4 cut(s) 35, 293, 869, 1150
Tsp45I GTSAC 1 cut(s) 1423
TspDTI ATGAA 4 cut(s) 554, 707, 908, 1160
TspRI CASTG 5 cut(s) 193, 832, 889, 1104, 1181
Van91I CCANNNNNTGG 1 cut(s) 256
VpaK11BI GGWCC 3 cut(s) 214, 368, 1446
XapI RAATTY 2 cut(s) 199, 966
XceI RCATGY 2 cut(s) 1027, 1255
XmiI GTMKAC 1 cut(s) 1072
XmnI GAANNNNTTC 1 cut(s) 966
XspI CTAG 4 cut(s) 888, 938, 1017, 1134
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.