Homeodomain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_8 | PF13855 | 114 - 170 | 1.4e-08 | Leucine rich repeat |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 426 |
| AcsI | RAATTY | 1 cut(s) | 311 |
| AdeI | CACNNNGTG | 1 cut(s) | 13 |
| AgsI | TTSAA | 5 cut(s) | 56, 119, 296, 410, 490 |
| AjnI | CCWGG | 1 cut(s) | 327 |
| AluBI | AGCT | 1 cut(s) | 436 |
| AluI | AGCT | 1 cut(s) | 436 |
| Alw26I | GTCTC | 1 cut(s) | 499 |
| AlwI | GGATC | 1 cut(s) | 426 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 460, 518 |
| AoxI | GGCC | 1 cut(s) | 514 |
| ApeKI | GCWGC | 1 cut(s) | 67 |
| ApoI | RAATTY | 1 cut(s) | 311 |
| AspS9I | GGNCC | 2 cut(s) | 4, 515 |
| AsuC2I | CCSGG | 1 cut(s) | 62 |
| AsuHPI | GGTGA | 1 cut(s) | 455 |
| AvaII | GGWCC | 1 cut(s) | 4 |
| BanII | GRGCYC | 1 cut(s) | 535 |
| BauI | CACGAG | 1 cut(s) | 156 |
| BbvCI | CCTCAGC | 1 cut(s) | 453 |
| BbvI | GCAGC | 1 cut(s) | 54 |
| BccI | CCATC | 1 cut(s) | 388 |
| BciT130I | CCWGG | 1 cut(s) | 329 |
| BcnI | CCSGG | 1 cut(s) | 62 |
| BcoDI | GTCTC | 1 cut(s) | 499 |
| BisI | GCNGC | 1 cut(s) | 68 |
| BlsI | GCNGC | 1 cut(s) | 69 |
| Bme1390I | CCNGG | 2 cut(s) | 62, 329 |
| Bme18I | GGWCC | 1 cut(s) | 4 |
| BmgT120I | GGNCC | 2 cut(s) | 4, 515 |
| BmiI | GGNNCC | 1 cut(s) | 532 |
| BmrFI | CCNGG | 2 cut(s) | 62, 329 |
| BpmI | CTGGAG | 1 cut(s) | 311 |
| Bpu10I | CCTNAGC | 1 cut(s) | 453 |
| BpuEI | CTTGAG | 2 cut(s) | 265, 409 |
| BpuMI | CCSGG | 1 cut(s) | 62 |
| BsaJI | CCNNGG | 2 cut(s) | 328, 524 |
| Bse1I | ACTGG | 1 cut(s) | 465 |
| BseBI | CCWGG | 1 cut(s) | 329 |
| BseDI | CCNNGG | 2 cut(s) | 328, 524 |
| BseGI | GGATG | 2 cut(s) | 375, 383 |
| BseMII | CTCAG | 2 cut(s) | 114, 467 |
| BseNI | ACTGG | 1 cut(s) | 465 |
| BseXI | GCAGC | 1 cut(s) | 54 |
| BshFI | GGCC | 1 cut(s) | 516 |
| BsiSI | CCGG | 1 cut(s) | 62 |
| BslFI | GGGAC | 1 cut(s) | 154 |
| BsmAI | GTCTC | 1 cut(s) | 499 |
| BsmFI | GGGAC | 1 cut(s) | 154 |
| BsnI | GGCC | 1 cut(s) | 516 |
| Bsp1286I | GDGCHC | 1 cut(s) | 535 |
| Bsp143I | GATC | 1 cut(s) | 418 |
| BspANI | GGCC | 1 cut(s) | 516 |
| BspCNI | CTCAG | 2 cut(s) | 113, 466 |
| BspLI | GGNNCC | 1 cut(s) | 532 |
| BspPI | GGATC | 1 cut(s) | 426 |
| BsrI | ACTGG | 1 cut(s) | 465 |
| BssECI | CCNNGG | 2 cut(s) | 328, 524 |
| BssMI | GATC | 1 cut(s) | 418 |
| BssSI | CACGAG | 1 cut(s) | 156 |
| Bst2BI | CACGAG | 1 cut(s) | 156 |
| Bst2UI | CCWGG | 1 cut(s) | 329 |
| BstDEI | CTNAG | 2 cut(s) | 100, 453 |
| BstDSI | CCRYGG | 1 cut(s) | 524 |
| BstF5I | GGATG | 2 cut(s) | 375, 383 |
| BstKTI | GATC | 1 cut(s) | 421 |
| BstMAI | GTCTC | 1 cut(s) | 499 |
| BstMBI | GATC | 1 cut(s) | 418 |
| BstNI | CCWGG | 1 cut(s) | 329 |
| BstSCI | CCNGG | 2 cut(s) | 60, 327 |
| BstV1I | GCAGC | 1 cut(s) | 54 |
| BstX2I | RGATCY | 1 cut(s) | 418 |
| BstYI | RGATCY | 1 cut(s) | 418 |
| BsuRI | GGCC | 1 cut(s) | 516 |
| BtgI | CCRYGG | 1 cut(s) | 524 |
| BtsCI | GGATG | 2 cut(s) | 375, 383 |
| CaiI | CAGNNNCTG | 2 cut(s) | 460, 518 |
| Cfr13I | GGNCC | 2 cut(s) | 4, 515 |
| CviJI | RGCY | 4 cut(s) | 406, 436, 516, 533 |
| CviKI_1 | RGCY | 4 cut(s) | 406, 436, 516, 533 |
| DdeI | CTNAG | 2 cut(s) | 100, 453 |
| DpnI | GATC | 1 cut(s) | 420 |
| DpnII | GATC | 1 cut(s) | 418 |
| DraIII | CACNNNGTG | 1 cut(s) | 13 |
| Eco24I | GRGCYC | 1 cut(s) | 535 |
| Eco47I | GGWCC | 1 cut(s) | 4 |
| EcoO109I | RGGNCCY | 1 cut(s) | 515 |
| EcoRI | GAATTC | 1 cut(s) | 311 |
| EcoRII | CCWGG | 1 cut(s) | 327 |
| EcoT38I | GRGCYC | 1 cut(s) | 535 |
| FaiI | YATR | 3 cut(s) | 21, 187, 429 |
| FaqI | GGGAC | 1 cut(s) | 154 |
| Fnu4HI | GCNGC | 1 cut(s) | 68 |
| FokI | GGATG | 2 cut(s) | 362, 370 |
| FriOI | GRGCYC | 1 cut(s) | 535 |
| Fsp4HI | GCNGC | 1 cut(s) | 68 |
| GluI | GCNGC | 1 cut(s) | 68 |
| GsuI | CTGGAG | 1 cut(s) | 311 |
| HaeIII | GGCC | 1 cut(s) | 516 |
| HapII | CCGG | 1 cut(s) | 62 |
| HinfI | GANTC | 6 cut(s) | 28, 49, 304, 410, 448, 473 |
| HpaII | CCGG | 1 cut(s) | 62 |
| HphI | GGTGA | 1 cut(s) | 455 |
| Hpy188I | TCNGA | 1 cut(s) | 33 |
| Hpy188III | TCNNGA | 7 cut(s) | 77, 132, 158, 211, 254, 308, 481 |
| HpyAV | CCTTC | 1 cut(s) | 290 |
| HpyF3I | CTNAG | 2 cut(s) | 100, 453 |
| Kzo9I | GATC | 1 cut(s) | 418 |
| LmnI | GCTCC | 1 cut(s) | 530 |
| Lsp1109I | GCAGC | 1 cut(s) | 54 |
| MaeIII | GTNAC | 2 cut(s) | 339, 371 |
| MalI | GATC | 1 cut(s) | 420 |
| MboI | GATC | 1 cut(s) | 418 |
| MboII | GAAGA | 3 cut(s) | 44, 58, 313 |
| MflI | RGATCY | 1 cut(s) | 418 |
| MhlI | GDGCHC | 1 cut(s) | 535 |
| MluCI | AATT | 3 cut(s) | 56, 289, 311 |
| MmeI | TCCRAC | 1 cut(s) | 396 |
| MnlI | CCTC | 2 cut(s) | 250, 462 |
| MseI | TTAA | 1 cut(s) | 559 |
| MspI | CCGG | 1 cut(s) | 62 |
| MspR9I | CCNGG | 2 cut(s) | 62, 329 |
| MvaI | CCWGG | 1 cut(s) | 329 |
| NciI | CCSGG | 1 cut(s) | 62 |
| NdeII | GATC | 1 cut(s) | 418 |
| NlaIV | GGNNCC | 1 cut(s) | 532 |
| NmuCI | GTSAC | 2 cut(s) | 339, 371 |
| PfeI | GAWTC | 6 cut(s) | 28, 49, 304, 410, 448, 473 |
| PkrI | GCNGC | 1 cut(s) | 69 |
| Psp6I | CCWGG | 1 cut(s) | 327 |
| PspGI | CCWGG | 1 cut(s) | 327 |
| PspN4I | GGNNCC | 1 cut(s) | 532 |
| PspPI | GGNCC | 2 cut(s) | 4, 515 |
| PstNI | CAGNNNCTG | 2 cut(s) | 460, 518 |
| PsuI | RGATCY | 1 cut(s) | 418 |
| SaqAI | TTAA | 1 cut(s) | 559 |
| SatI | GCNGC | 1 cut(s) | 68 |
| Sau3AI | GATC | 1 cut(s) | 418 |
| Sau96I | GGNCC | 2 cut(s) | 4, 515 |
| ScrFI | CCNGG | 2 cut(s) | 62, 329 |
| SduI | GDGCHC | 1 cut(s) | 535 |
| SetI | ASST | 4 cut(s) | 40, 106, 229, 438 |
| SinI | GGWCC | 1 cut(s) | 4 |
| SmlI | CTYRAG | 2 cut(s) | 280, 388 |
| SmoI | CTYRAG | 2 cut(s) | 280, 388 |
| Sse9I | AATT | 3 cut(s) | 56, 289, 311 |
| StyD4I | CCNGG | 2 cut(s) | 60, 327 |
| TaqI | TCGA | 2 cut(s) | 253, 482 |
| TasI | AATT | 3 cut(s) | 56, 289, 311 |
| TfiI | GAWTC | 6 cut(s) | 28, 49, 304, 410, 448, 473 |
| Tru1I | TTAA | 1 cut(s) | 559 |
| Tru9I | TTAA | 1 cut(s) | 559 |
| TseFI | GTSAC | 2 cut(s) | 339, 371 |
| TseI | GCWGC | 1 cut(s) | 67 |
| Tsp45I | GTSAC | 2 cut(s) | 339, 371 |
| TspDTI | ATGAA | 2 cut(s) | 174, 304 |
| VpaK11BI | GGWCC | 1 cut(s) | 4 |
| XapI | RAATTY | 1 cut(s) | 311 |