Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0000152

Physical Location & Seq

Genomic Coordinates Forward (+)

34247919 .. 34248470

Gene Structure 552 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0317000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 552 bp

ATGAGCTTCAGATCTCCACACTGTCCATCTCCACCAAGCAAACCGAGCTCCAGACCTCAGTCTCATCTCCACAAGCTCATTGCCCTCGAGAATCTCCCCGTCTTCCACGGCCGTGCCGGCAACGAGAACGCCGTCGACTGGCTCATCACCACCGAGCGCCACTTCTCCTACCTTGACATCCCCCTCCGCCGACCGAGTCAAGATCGCCGCCACTCGCTTGCGCGGCGGCCCGAGCCCTTGGATGTGCTGGTACTAGTCTCGGTACCCGGGGAGTTCCCGTGGTCGATTTTCAGGTATGAGTTTATGAGGTTTTTCCGGCCGGAGACGCTCATCGCCGCCATGTATAATTTGAAGCAGAAGAGGTCGGTGAAGGAGTATGAGGTGGAGTTTCTGAGGCTGGCTGCTAGAGGTGGAGATCTCAGAGCCGTGATTGAACAATACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTATGAGGGCAATACTGTCAAACACTGTTGGATTGGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001763 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0009933 GO:0009987 GO:0010014 GO:0010016 GO:0010223 GO:0010346 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019827 GO:0022412 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048507 GO:0048532 GO:0048608 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0080166 GO:0090506 GO:0090567 GO:0098727 GO:0099402 GO:0140110 GO:1903506 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox

Protein Analysis

183

Amino Acids

21.88

Weight (kDa)

9.42

Isoelectric Point (pI)

65.45

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000152)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17950
fragaria_vesca	FvH4_1g11910 FvH4_3g04400
malus_domestica	MD02G1133000.v1.1 MD15G1245600.v1.1
prunus_persica	Prupe.7G167700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0314921 RchiOBHm_Chr1g0319941 RchiOBHm_Chr1g0321251 RchiOBHm_Chr1g0323021 RchiOBHm_Chr1g0324491 RchiOBHm_Chr1g0325171 RchiOBHm_Chr1g0360601 RchiOBHm_Chr1g0365451 RchiOBHm_Chr1g0381201 RchiOBHm_Chr2g0085401 RchiOBHm_Chr2g0099501 RchiOBHm_Chr2g0106981 RchiOBHm_Chr2g0130271 RchiOBHm_Chr2g0155121 RchiOBHm_Chr3g0455971 RchiOBHm_Chr3g0459501 RchiOBHm_Chr3g0478111 RchiOBHm_Chr3g0480661 RchiOBHm_Chr4g0388561 RchiOBHm_Chr4g0394421 RchiOBHm_Chr4g0424371 RchiOBHm_Chr5g0028631 RchiOBHm_Chr5g0069751 RchiOBHm_Chr5g0076691 RchiOBHm_Chr5g0076711 RchiOBHm_Chr5g0076721 RchiOBHm_Chr5g0079671 RchiOBHm_Chr5g0079731 RchiOBHm_Chr5g0079911 RchiOBHm_Chr5g0081741 RchiOBHm_Chr6g0255231 RchiOBHm_Chr6g0283251 RchiOBHm_Chr6g0300091 RchiOBHm_Chr7g0190751 RchiOBHm_Chr7g0240241
rosa_multiflora	Rmu_co8441375.1_g000001 Rmu_sc0000110.1_g000027 Rmu_sc0000187.1_g000008 Rmu_sc0000240.1_g000065 Rmu_sc0000251.1_g000004 Rmu_sc0000272.1_g000025 Rmu_sc0000276.1_g000074 Rmu_sc0000284.1_g000010 Rmu_sc0000285.1_g000021 Rmu_sc0000360.1_g000034 Rmu_sc0000365.1_g000038 Rmu_sc0000368.1_g000013 Rmu_sc0000368.1_g000025 Rmu_sc0000770.1_g000044 Rmu_sc0000770.1_g000052 Rmu_sc0000795.1_g000098 Rmu_sc0000945.1_g000037 Rmu_sc0000949.1_g000023 Rmu_sc0000982.1_g000002 Rmu_sc0001424.1_g000004 Rmu_sc0001775.1_g000004 Rmu_sc0001952.1_g000010 Rmu_sc0002080.1_g000046 Rmu_sc0002141.1_g000016 Rmu_sc0002183.1_g000004 Rmu_sc0002187.1_g000040 Rmu_sc0002263.1_g000057 Rmu_sc0002351.1_g000061 Rmu_sc0002542.1_g000017 Rmu_sc0002751.1_g000003 Rmu_sc0002792.1_g000029 Rmu_sc0002798.1_g000020 Rmu_sc0002985.1_g000010 Rmu_sc0003124.1_g000019 Rmu_sc0003207.1_g000019 Rmu_sc0003237.1_g000003 Rmu_sc0003363.1_g000050 Rmu_sc0003443.1_g000025 Rmu_sc0003465.1_g000032 Rmu_sc0003500.1_g000012 Rmu_sc0003809.1_g000026 Rmu_sc0003859.1_g000032 Rmu_sc0004085.1_g000003 Rmu_sc0004085.1_g000008 Rmu_sc0004571.1_g000019 Rmu_sc0004753.1_g000006 Rmu_sc0004865.1_g000017 Rmu_sc0004881.1_g000007 Rmu_sc0005697.1_g000023 Rmu_sc0005812.1_g000020 Rmu_sc0007076.1_g000001 Rmu_sc0007801.1_g000003 Rmu_sc0008355.1_g000007 Rmu_sc0009380.1_g000006 Rmu_sc0010191.1_g000004 Rmu_sc0010252.1_g000006 Rmu_sc0011026.1_g000001 Rmu_sc0011824.1_g000003 Rmu_sc0012533.1_g000006 Rmu_sc0012640.1_g000006 Rmu_sc0014032.1_g000001 Rmu_sc0014545.1_g000001 Rmu_sc0014840.1_g000008 Rmu_sc0015060.1_g000013 Rmu_sc0018122.1_g000003 Rmu_sc0026563.1_g000004 Rmu_ssc0000213.1_g000057 Rmu_ssc0000213.1_g000091 Rmu_ssc0000262.1_g000021 Rmu_ssc0000282.1_g000021 Rmu_ssc0000295.1_g000041 Rmu_ssc0000438.1_g000002 Rmu_ssc0000472.1_g000015
rosa_roxburghii	Rroxscaffold_1G00020080 Rroxscaffold_2G00084980 Rroxscaffold_2G00143020 Rroxscaffold_3G00261750 Rroxscaffold_3G00268610 Rroxscaffold_4G00312950 Rroxscaffold_7G00156650 Rroxscaffold_7G00215160
rosa_rugosa	Rorug01G0077100 Rorug01G0201100 Rorug01G0246900 Rorug01G0256600 Rorug02G0080200 Rorug02G0089300 Rorug02G0090700 Rorug02G0177200 Rorug02G0187000 Rorug02G0192600 Rorug02G0232700 Rorug02G0262100 Rorug02G0328300 Rorug02G0408300 Rorug02G0641200 Rorug03G0155000 Rorug03G0185500 Rorug03G0256500 Rorug03G0291000 Rorug03G0299400 Rorug03G0317000 Rorug03G0326700 Rorug03G0330800 Rorug03G0339700 Rorug03G0352900 Rorug04G0029800 Rorug04G0029900 Rorug04G0048100 Rorug04G0075800 Rorug04G0124400 Rorug04G0212100 Rorug04G0212400 Rorug04G0253200 Rorug05G0116700 Rorug05G0146500 Rorug05G0211900 Rorug05G0215700 Rorug05G0216100 Rorug05G0220500 Rorug05G0339400 Rorug05G0352000 Rorug05G0356500.1 Rorug05G0398900 Rorug05G0474700 Rorug05G0511400 Rorug05G0540200 Rorug05G0541000 Rorug05G0572900.1 Rorug05G0584000 Rorug06G0000900 Rorug06G0014600 Rorug06G0018800 Rorug06G0026100 Rorug06G0042900 Rorug06G0082600 Rorug06G0133900 Rorug06G0229100 Rorug07G0321400 Rorug07G0326400 Rorug07G0326600.1
rosa_wichuraiana	Rw0G017710 Rw1G012170 Rw1G039350 Rw2G010030 Rw3G024430 Rw5G045720 Rw7G025340 Rw7G040870

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	262
AccB1I	GGYRCC	1 cut(s)	262
AccI	GTMKAC	1 cut(s)	135
AccII	CGCG	1 cut(s)	223
AciI	CCGC	5 cut(s)	187, 208, 223, 226, 336
AcoI	YGGCCR	2 cut(s)	109, 317
AfaI	GTAC	2 cut(s)	252, 264
AfiI	CCNNNNNNNGG	1 cut(s)	138
AgsI	TTSAA	2 cut(s)	352, 434
AhlI	ACTAGT	1 cut(s)	253
AleI	CACNNNNGTG	1 cut(s)	111
AluBI	AGCT	3 cut(s)	6, 48, 76
AluI	AGCT	3 cut(s)	6, 48, 76
Alw21I	GWGCWC	1 cut(s)	50
Alw26I	GTCTC	3 cut(s)	66, 262, 317
Ama87I	CYCGRG	3 cut(s)	86, 230, 266
AoxI	GGCC	3 cut(s)	109, 227, 317
ApeKI	GCWGC	1 cut(s)	401
Asp718I	GGTACC	1 cut(s)	262
AspLEI	GCGC	2 cut(s)	159, 223
AspS9I	GGNCC	1 cut(s)	228
AsuC2I	CCSGG	2 cut(s)	267, 268
AsuHPI	GGTGA	2 cut(s)	139, 379
AvaI	CYCGRG	3 cut(s)	86, 230, 266
BanI	GGYRCC	1 cut(s)	262
BanII	GRGCYC	2 cut(s)	50, 237
BbsI	GAAGAC	1 cut(s)	94
Bbv12I	GWGCWC	1 cut(s)	50
BbvI	GCAGC	1 cut(s)	388
BccI	CCATC	1 cut(s)	34
BceAI	ACGGC	4 cut(s)	96, 116, 124, 410
BcnI	CCSGG	2 cut(s)	267, 268
BcoDI	GTCTC	3 cut(s)	66, 262, 317
BcuI	ACTAGT	1 cut(s)	253
BfaI	CTAG	2 cut(s)	254, 405
BfoI	RGCGCY	1 cut(s)	160
BglI	GCCNNNNNGGC	1 cut(s)	117
BglII	AGATCT	2 cut(s)	11, 415
BisI	GCNGC	5 cut(s)	208, 224, 227, 336, 402
BlsI	GCNGC	5 cut(s)	209, 225, 228, 337, 403
Bme1390I	CCNGG	2 cut(s)	267, 268
BmeT110I	CYCGRG	3 cut(s)	86, 230, 266
BmgT120I	GGNCC	1 cut(s)	228
BmiI	GGNNCC	1 cut(s)	264
BmrFI	CCNGG	2 cut(s)	267, 268
BoxI	GACNNNNGTC	1 cut(s)	58
BpiI	GAAGAC	1 cut(s)	94
BpmI	CTGGAG	1 cut(s)	34
BpuMI	CCSGG	2 cut(s)	267, 268
BsaJI	CCNNGG	5 cut(s)	106, 237, 266, 267, 278
BsaXI	ACNNNNNCTCC	2 cut(s)	263, 293
Bsc4I	CCNNNNNNNGG	1 cut(s)	138
Bse118I	RCCGGY	1 cut(s)	116
Bse1I	ACTGG	1 cut(s)	143
Bse3DI	GCAATG	1 cut(s)	78
BseDI	CCNNGG	5 cut(s)	106, 237, 266, 267, 278
BseGI	GGATG	2 cut(s)	177, 247
BseLI	CCNNNNNNNGG	1 cut(s)	138
BseMI	GCAATG	1 cut(s)	78
BseMII	CTCAG	3 cut(s)	71, 383, 433
BseNI	ACTGG	1 cut(s)	143
BseX3I	CGGCCG	2 cut(s)	109, 317
BseXI	GCAGC	1 cut(s)	388
Bsh1236I	CGCG	1 cut(s)	223
Bsh1285I	CGRYCG	3 cut(s)	112, 194, 320
BshFI	GGCC	3 cut(s)	111, 229, 319
BshNI	GGYRCC	1 cut(s)	262
BsiEI	CGRYCG	3 cut(s)	112, 194, 320
BsiHKAI	GWGCWC	1 cut(s)	50
BsiHKCI	CYCGRG	3 cut(s)	86, 230, 266
BsiSI	CCGG	4 cut(s)	117, 267, 316, 320
BslI	CCNNNNNNNGG	1 cut(s)	138
BsmAI	GTCTC	3 cut(s)	66, 262, 317
BsmBI	CGTCTC	1 cut(s)	317
BsnI	GGCC	3 cut(s)	111, 229, 319
BsoBI	CYCGRG	3 cut(s)	86, 230, 266
Bsp1286I	GDGCHC	2 cut(s)	50, 237
Bsp143I	GATC	3 cut(s)	11, 202, 415
BspACI	CCGC	5 cut(s)	187, 208, 223, 226, 336
BspANI	GGCC	3 cut(s)	111, 229, 319
BspCNI	CTCAG	3 cut(s)	70, 384, 432
BspFNI	CGCG	1 cut(s)	223
BspLI	GGNNCC	1 cut(s)	264
BspT107I	GGYRCC	1 cut(s)	262
BsrDI	GCAATG	1 cut(s)	78
BsrFI	RCCGGY	1 cut(s)	116
BsrI	ACTGG	1 cut(s)	143
BssAI	RCCGGY	1 cut(s)	116
BssECI	CCNNGG	5 cut(s)	106, 237, 266, 267, 278
BssMI	GATC	3 cut(s)	11, 202, 415
BssT1I	CCWWGG	1 cut(s)	237
Bst4CI	ACNGT	3 cut(s)	23, 529, 539
Bst6I	CTCTTC	1 cut(s)	353
BstC8I	GCNNGC	3 cut(s)	118, 219, 399
BstDEI	CTNAG	3 cut(s)	57, 392, 419
BstDSI	CCRYGG	2 cut(s)	106, 278
BstF5I	GGATG	2 cut(s)	177, 247
BstFNI	CGCG	1 cut(s)	223
BstH2I	RGCGCY	1 cut(s)	160
BstHHI	GCGC	2 cut(s)	159, 223
BstKTI	GATC	3 cut(s)	14, 205, 418
BstMAI	GTCTC	3 cut(s)	66, 262, 317
BstMBI	GATC	3 cut(s)	11, 202, 415
BstMCI	CGRYCG	3 cut(s)	112, 194, 320
BstMWI	GCNNNNNNNGC	5 cut(s)	45, 117, 223, 232, 325
BstPAI	GACNNNNGTC	1 cut(s)	58
BstSCI	CCNGG	2 cut(s)	265, 266
BstUI	CGCG	1 cut(s)	223
BstV1I	GCAGC	1 cut(s)	388
BstV2I	GAAGAC	1 cut(s)	94
BstX2I	RGATCY	2 cut(s)	11, 415
BstYI	RGATCY	2 cut(s)	11, 415
BstZI	CGGCCG	2 cut(s)	109, 317
BsuRI	GGCC	3 cut(s)	111, 229, 319
BtgI	CCRYGG	2 cut(s)	106, 278
BtgZI	GCGATG	1 cut(s)	316
BtsCI	GGATG	2 cut(s)	177, 247
BtsIMutI	CAGTG	2 cut(s)	19, 535
Cac8I	GCNNGC	3 cut(s)	118, 219, 399
CfoI	GCGC	2 cut(s)	159, 223
Cfr10I	RCCGGY	1 cut(s)	116
Cfr13I	GGNCC	1 cut(s)	228
Cfr9I	CCCGGG	1 cut(s)	266
CseI	GACGC	1 cut(s)	334
Csp6I	GTAC	2 cut(s)	251, 263
CviAII	CATG	1 cut(s)	340
CviQI	GTAC	2 cut(s)	251, 263
DdeI	CTNAG	3 cut(s)	57, 392, 419
DpnI	GATC	3 cut(s)	13, 204, 417
DpnII	GATC	3 cut(s)	11, 202, 415
EaeI	YGGCCR	2 cut(s)	109, 317
EagI	CGGCCG	2 cut(s)	109, 317
Eam1104I	CTCTTC	1 cut(s)	353
EarI	CTCTTC	1 cut(s)	353
EciI	GGCGGA	1 cut(s)	176
Ecl136II	GAGCTC	1 cut(s)	48
EclXI	CGGCCG	2 cut(s)	109, 317
Eco130I	CCWWGG	1 cut(s)	237
Eco24I	GRGCYC	2 cut(s)	50, 237
Eco52I	CGGCCG	2 cut(s)	109, 317
Eco53kI	GAGCTC	1 cut(s)	48
Eco88I	CYCGRG	3 cut(s)	86, 230, 266
EcoICRI	GAGCTC	1 cut(s)	48
EcoT14I	CCWWGG	1 cut(s)	237
EcoT38I	GRGCYC	2 cut(s)	50, 237
ErhI	CCWWGG	1 cut(s)	237
Esp3I	CGTCTC	1 cut(s)	317
FaeI	CATG	1 cut(s)	343
FaiI	YATR	6 cut(s)	297, 305, 341, 345, 378, 516
FatI	CATG	1 cut(s)	339
FblI	GTMKAC	1 cut(s)	135
Fnu4HI	GCNGC	5 cut(s)	208, 224, 227, 336, 402
FokI	GGATG	2 cut(s)	164, 254
FriOI	GRGCYC	2 cut(s)	50, 237
Fsp4HI	GCNGC	5 cut(s)	208, 224, 227, 336, 402
FspBI	CTAG	2 cut(s)	254, 405
GlaI	GCGC	2 cut(s)	158, 222
GluI	GCNGC	5 cut(s)	208, 224, 227, 336, 402
GsuI	CTGGAG	1 cut(s)	34
HaeII	RGCGCY	1 cut(s)	160
HaeIII	GGCC	3 cut(s)	111, 229, 319
HapII	CCGG	4 cut(s)	117, 267, 316, 320
HgaI	GACGC	1 cut(s)	334
HhaI	GCGC	2 cut(s)	159, 223
Hin1II	CATG	1 cut(s)	343
Hin6I	GCGC	2 cut(s)	157, 221
HinP1I	GCGC	2 cut(s)	157, 221
HincII	GTYRAC	1 cut(s)	136
HindII	GTYRAC	1 cut(s)	136
HinfI	GANTC	2 cut(s)	91, 196
HpaII	CCGG	4 cut(s)	117, 267, 316, 320
HphI	GGTGA	2 cut(s)	139, 379
Hpy166II	GTNNAC	1 cut(s)	136
Hpy188I	TCNGA	3 cut(s)	11, 393, 422
Hpy188III	TCNNGA	3 cut(s)	51, 88, 200
Hpy8I	GTNNAC	1 cut(s)	136
Hpy99I	CGWCG	1 cut(s)	137
HpyAV	CCTTC	1 cut(s)	364
HpyCH4III	ACNGT	3 cut(s)	23, 529, 539
HpyF10VI	GCNNNNNNNGC	5 cut(s)	45, 117, 223, 232, 325
HpyF3I	CTNAG	3 cut(s)	57, 392, 419
Hsp92II	CATG	1 cut(s)	343
HspAI	GCGC	2 cut(s)	157, 221
KpnI	GGTACC	1 cut(s)	266
KroI	GCCGGC	1 cut(s)	116
KroNI	GCCGGC	1 cut(s)	118
Kzo9I	GATC	3 cut(s)	11, 202, 415
LmnI	GCTCC	1 cut(s)	53
LpnPI	CCDG	9 cut(s)	64, 124, 130, 233, 277, 280, 329, 333, 383
Lsp1109I	GCAGC	1 cut(s)	388
MaeI	CTAG	2 cut(s)	254, 405
MalI	GATC	3 cut(s)	13, 204, 417
MboI	GATC	3 cut(s)	11, 202, 415
MboII	GAAGA	2 cut(s)	94, 370
MflI	RGATCY	2 cut(s)	11, 415
MhlI	GDGCHC	2 cut(s)	50, 237
MluCI	AATT	1 cut(s)	346
MlyI	GAGTC	1 cut(s)	205
MmeI	TCCRAC	1 cut(s)	521
MnlI	CCTC	9 cut(s)	66, 95, 194, 300, 354, 373, 387, 401, 511
MroNI	GCCGGC	1 cut(s)	116
MslI	CAYNNNNRTG	1 cut(s)	111
MspI	CCGG	4 cut(s)	117, 267, 316, 320
MspR9I	CCNGG	2 cut(s)	267, 268
MvnI	CGCG	1 cut(s)	223
MwoI	GCNNNNNNNGC	5 cut(s)	45, 117, 223, 232, 325
NaeI	GCCGGC	1 cut(s)	118
NciI	CCSGG	2 cut(s)	267, 268
NdeII	GATC	3 cut(s)	11, 202, 415
NgoMIV	GCCGGC	1 cut(s)	116
NlaIII	CATG	1 cut(s)	343
NlaIV	GGNNCC	1 cut(s)	264
OliI	CACNNNNGTG	1 cut(s)	111
PaeR7I	CTCGAG	1 cut(s)	86
PcsI	WCGNNNNNNNCGW	1 cut(s)	129
PdiI	GCCGGC	1 cut(s)	118
PfeI	GAWTC	1 cut(s)	91
PflFI	GACNNNGTC	1 cut(s)	195
PkrI	GCNGC	5 cut(s)	209, 225, 228, 337, 403
PleI	GAGTC	1 cut(s)	204
PpsI	GAGTC	1 cut(s)	204
PshAI	GACNNNNGTC	1 cut(s)	58
Psp124BI	GAGCTC	1 cut(s)	50
PspN4I	GGNNCC	1 cut(s)	264
PspPI	GGNCC	1 cut(s)	228
PsuI	RGATCY	2 cut(s)	11, 415
PsyI	GACNNNGTC	1 cut(s)	195
RsaI	GTAC	2 cut(s)	252, 264
RsaNI	GTAC	2 cut(s)	251, 263
RseI	CAYNNNNRTG	1 cut(s)	111
SacI	GAGCTC	1 cut(s)	50
SalI	GTCGAC	1 cut(s)	134
SatI	GCNGC	5 cut(s)	208, 224, 227, 336, 402
Sau3AI	GATC	3 cut(s)	11, 202, 415
Sau96I	GGNCC	1 cut(s)	228
SchI	GAGTC	1 cut(s)	205
ScrFI	CCNGG	2 cut(s)	267, 268
SduI	GDGCHC	2 cut(s)	50, 237
Sfr274I	CTCGAG	1 cut(s)	86
SlaI	CTCGAG	1 cut(s)	86
SmaI	CCCGGG	1 cut(s)	268
SmiMI	CAYNNNNRTG	1 cut(s)	111
SmlI	CTYRAG	1 cut(s)	86
SmoI	CTYRAG	1 cut(s)	86
SpeI	ACTAGT	1 cut(s)	253
Sse9I	AATT	1 cut(s)	346
SsiI	CCGC	5 cut(s)	187, 208, 223, 226, 336
SspMI	CTAG	2 cut(s)	254, 405
SstI	GAGCTC	1 cut(s)	50
StyD4I	CCNGG	2 cut(s)	265, 266
StyI	CCWWGG	1 cut(s)	237
TaaI	ACNGT	3 cut(s)	23, 529, 539
TaqI	TCGA	3 cut(s)	87, 135, 284
TaqII	GACCGA	1 cut(s)	208
TasI	AATT	1 cut(s)	346
TauI	GCSGC	4 cut(s)	210, 226, 229, 338
TfiI	GAWTC	1 cut(s)	91
TscAI	CASTG	2 cut(s)	26, 542
TseI	GCWGC	1 cut(s)	401
TspMI	CCCGGG	1 cut(s)	266
TspRI	CASTG	2 cut(s)	26, 542
Tth111I	GACNNNGTC	1 cut(s)	195
XhoI	CTCGAG	1 cut(s)	86
XmaI	CCCGGG	1 cut(s)	266
XmiI	GTMKAC	1 cut(s)	135
XspI	CTAG	2 cut(s)	254, 405

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.