Homeodomain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DUF1677 | PF07911 | 63 - 151 | 1.7e-36 | Protein of unknown function (DUF1677) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 4 |
| AclWI | GGATC | 2 cut(s) | 165, 514 |
| AcuI | CTGAAG | 1 cut(s) | 441 |
| AcyI | GRCGYC | 1 cut(s) | 5 |
| AfaI | GTAC | 3 cut(s) | 242, 255, 266 |
| AgsI | TTSAA | 3 cut(s) | 191, 352, 442 |
| AluBI | AGCT | 6 cut(s) | 20, 147, 316, 419, 425, 540 |
| AluI | AGCT | 6 cut(s) | 20, 147, 316, 419, 425, 540 |
| Alw21I | GWGCWC | 2 cut(s) | 149, 233 |
| Alw44I | GTGCAC | 1 cut(s) | 229 |
| AlwI | GGATC | 2 cut(s) | 165, 514 |
| AoxI | GGCC | 1 cut(s) | 345 |
| ApaLI | GTGCAC | 1 cut(s) | 229 |
| AspA2I | CCTAGG | 1 cut(s) | 491 |
| AspLEI | GCGC | 1 cut(s) | 7 |
| AsuII | TTCGAA | 1 cut(s) | 129 |
| AvrII | CCTAGG | 1 cut(s) | 491 |
| BaeGI | GKGCMC | 1 cut(s) | 233 |
| BanI | GGYRCC | 1 cut(s) | 4 |
| BanII | GRGCYC | 1 cut(s) | 149 |
| BbsI | GAAGAC | 1 cut(s) | 198 |
| Bbv12I | GWGCWC | 2 cut(s) | 149, 233 |
| BbvCI | CCTCAGC | 1 cut(s) | 297 |
| BccI | CCATC | 1 cut(s) | 491 |
| BfaI | CTAG | 2 cut(s) | 492, 558 |
| BfmI | CTRYAG | 1 cut(s) | 150 |
| BfoI | RGCGCY | 1 cut(s) | 8 |
| BlnI | CCTAGG | 1 cut(s) | 491 |
| BmcAI | AGTACT | 1 cut(s) | 266 |
| BmiI | GGNNCC | 1 cut(s) | 6 |
| BpiI | GAAGAC | 1 cut(s) | 198 |
| Bpu10I | CCTNAGC | 1 cut(s) | 297 |
| Bpu14I | TTCGAA | 1 cut(s) | 129 |
| BsaHI | GRCGYC | 1 cut(s) | 5 |
| BsaJI | CCNNGG | 2 cut(s) | 74, 491 |
| BsaWI | WCCGGW | 1 cut(s) | 403 |
| BseDI | CCNNGG | 2 cut(s) | 74, 491 |
| BseGI | GGATG | 2 cut(s) | 41, 89 |
| BseMII | CTCAG | 3 cut(s) | 148, 228, 288 |
| BseSI | GKGCMC | 1 cut(s) | 233 |
| BshFI | GGCC | 1 cut(s) | 347 |
| BshNI | GGYRCC | 1 cut(s) | 4 |
| BsiHKAI | GWGCWC | 2 cut(s) | 149, 233 |
| BsiSI | CCGG | 2 cut(s) | 404, 548 |
| BslFI | GGGAC | 2 cut(s) | 475, 509 |
| BsmFI | GGGAC | 2 cut(s) | 475, 509 |
| BsmI | GAATGC | 1 cut(s) | 358 |
| BsnI | GGCC | 1 cut(s) | 347 |
| Bsp119I | TTCGAA | 1 cut(s) | 129 |
| Bsp1286I | GDGCHC | 2 cut(s) | 149, 233 |
| Bsp143I | GATC | 3 cut(s) | 157, 247, 506 |
| BspANI | GGCC | 1 cut(s) | 347 |
| BspCNI | CTCAG | 3 cut(s) | 147, 229, 289 |
| BspLI | GGNNCC | 1 cut(s) | 6 |
| BspPI | GGATC | 2 cut(s) | 165, 514 |
| BspQI | GCTCTTC | 2 cut(s) | 306, 440 |
| BspT104I | TTCGAA | 1 cut(s) | 129 |
| BspT107I | GGYRCC | 1 cut(s) | 4 |
| BssECI | CCNNGG | 2 cut(s) | 74, 491 |
| BssMI | GATC | 3 cut(s) | 157, 247, 506 |
| BssNI | GRCGYC | 1 cut(s) | 5 |
| BssT1I | CCWWGG | 2 cut(s) | 74, 491 |
| Bst6I | CTCTTC | 4 cut(s) | 219, 306, 336, 440 |
| BstACI | GRCGYC | 1 cut(s) | 5 |
| BstBI | TTCGAA | 1 cut(s) | 129 |
| BstC8I | GCNNGC | 1 cut(s) | 233 |
| BstDEI | CTNAG | 4 cut(s) | 134, 237, 297, 477 |
| BstF5I | GGATG | 2 cut(s) | 41, 89 |
| BstH2I | RGCGCY | 1 cut(s) | 8 |
| BstHHI | GCGC | 1 cut(s) | 7 |
| BstKTI | GATC | 3 cut(s) | 160, 250, 509 |
| BstMBI | GATC | 3 cut(s) | 157, 247, 506 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 144, 228, 353 |
| BstNSI | RCATGY | 1 cut(s) | 372 |
| BstSFI | CTRYAG | 1 cut(s) | 150 |
| BstSLI | GKGCMC | 1 cut(s) | 233 |
| BstV2I | GAAGAC | 1 cut(s) | 198 |
| BstX2I | RGATCY | 1 cut(s) | 157 |
| BstYI | RGATCY | 1 cut(s) | 157 |
| BsuRI | GGCC | 1 cut(s) | 347 |
| BtsCI | GGATG | 2 cut(s) | 41, 89 |
| BtsI | GCAGTG | 1 cut(s) | 309 |
| BtsIMutI | CAGTG | 1 cut(s) | 309 |
| Cac8I | GCNNGC | 1 cut(s) | 233 |
| CfoI | GCGC | 1 cut(s) | 7 |
| CseI | GACGC | 1 cut(s) | 203 |
| Csp6I | GTAC | 3 cut(s) | 241, 254, 265 |
| CviAII | CATG | 3 cut(s) | 11, 217, 369 |
| CviQI | GTAC | 3 cut(s) | 241, 254, 265 |
| DdeI | CTNAG | 4 cut(s) | 134, 237, 297, 477 |
| DinI | GGCGCC | 1 cut(s) | 6 |
| DpnI | GATC | 3 cut(s) | 159, 249, 508 |
| DpnII | GATC | 3 cut(s) | 157, 247, 506 |
| Eam1104I | CTCTTC | 4 cut(s) | 219, 306, 336, 440 |
| EarI | CTCTTC | 4 cut(s) | 219, 306, 336, 440 |
| Ecl136II | GAGCTC | 1 cut(s) | 147 |
| Eco130I | CCWWGG | 2 cut(s) | 74, 491 |
| Eco147I | AGGCCT | 1 cut(s) | 347 |
| Eco24I | GRGCYC | 1 cut(s) | 149 |
| Eco32I | GATATC | 1 cut(s) | 121 |
| Eco53kI | GAGCTC | 1 cut(s) | 147 |
| Eco57I | CTGAAG | 1 cut(s) | 441 |
| EcoICRI | GAGCTC | 1 cut(s) | 147 |
| EcoRV | GATATC | 1 cut(s) | 121 |
| EcoT14I | CCWWGG | 2 cut(s) | 74, 491 |
| EcoT38I | GRGCYC | 1 cut(s) | 149 |
| EgeI | GGCGCC | 1 cut(s) | 6 |
| EheI | GGCGCC | 1 cut(s) | 6 |
| ErhI | CCWWGG | 2 cut(s) | 74, 491 |
| FaeI | CATG | 3 cut(s) | 14, 220, 372 |
| FaqI | GGGAC | 2 cut(s) | 475, 509 |
| FatI | CATG | 3 cut(s) | 10, 216, 368 |
| FokI | GGATG | 2 cut(s) | 28, 76 |
| FriOI | GRGCYC | 1 cut(s) | 149 |
| FspBI | CTAG | 2 cut(s) | 492, 558 |
| GlaI | GCGC | 1 cut(s) | 6 |
| HaeII | RGCGCY | 1 cut(s) | 8 |
| HaeIII | GGCC | 1 cut(s) | 347 |
| HapII | CCGG | 2 cut(s) | 404, 548 |
| HgaI | GACGC | 1 cut(s) | 203 |
| HhaI | GCGC | 1 cut(s) | 7 |
| Hin1I | GRCGYC | 1 cut(s) | 5 |
| Hin1II | CATG | 3 cut(s) | 14, 220, 372 |
| Hin6I | GCGC | 1 cut(s) | 5 |
| HinP1I | GCGC | 1 cut(s) | 5 |
| HpaII | CCGG | 2 cut(s) | 404, 548 |
| Hpy166II | GTNNAC | 1 cut(s) | 231 |
| Hpy188I | TCNGA | 4 cut(s) | 94, 118, 184, 531 |
| Hpy8I | GTNNAC | 1 cut(s) | 231 |
| HpyAV | CCTTC | 2 cut(s) | 452, 508 |
| HpyCH4V | TGCA | 3 cut(s) | 231, 356, 368 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 144, 228, 353 |
| HpyF3I | CTNAG | 4 cut(s) | 134, 237, 297, 477 |
| Hsp92I | GRCGYC | 1 cut(s) | 5 |
| Hsp92II | CATG | 3 cut(s) | 14, 220, 372 |
| HspAI | GCGC | 1 cut(s) | 5 |
| KasI | GGCGCC | 1 cut(s) | 4 |
| Kzo9I | GATC | 3 cut(s) | 157, 247, 506 |
| LguI | GCTCTTC | 2 cut(s) | 306, 440 |
| LpnPI | CCDG | 5 cut(s) | 249, 302, 417, 468, 561 |
| MaeI | CTAG | 2 cut(s) | 492, 558 |
| MalI | GATC | 3 cut(s) | 159, 249, 508 |
| MboI | GATC | 3 cut(s) | 157, 247, 506 |
| MboII | GAAGA | 6 cut(s) | 203, 236, 323, 353, 454, 457 |
| MflI | RGATCY | 1 cut(s) | 157 |
| MhlI | GDGCHC | 2 cut(s) | 149, 233 |
| MluCI | AATT | 1 cut(s) | 552 |
| Mly113I | GGCGCC | 1 cut(s) | 5 |
| MmeI | TCCRAC | 1 cut(s) | 196 |
| MnlI | CCTC | 8 cut(s) | 18, 40, 148, 178, 292, 323, 337, 465 |
| MseI | TTAA | 3 cut(s) | 102, 162, 381 |
| MslI | CAYNNNNRTG | 1 cut(s) | 363 |
| MspI | CCGG | 2 cut(s) | 404, 548 |
| Mva1269I | GAATGC | 1 cut(s) | 358 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 144, 228, 353 |
| NarI | GGCGCC | 1 cut(s) | 5 |
| NdeII | GATC | 3 cut(s) | 157, 247, 506 |
| NlaIII | CATG | 3 cut(s) | 14, 220, 372 |
| NlaIV | GGNNCC | 1 cut(s) | 6 |
| NspI | RCATGY | 1 cut(s) | 372 |
| NspV | TTCGAA | 1 cut(s) | 129 |
| PceI | AGGCCT | 1 cut(s) | 347 |
| PciSI | GCTCTTC | 2 cut(s) | 306, 440 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 201 |
| PctI | GAATGC | 1 cut(s) | 358 |
| PluTI | GGCGCC | 1 cut(s) | 8 |
| Psp124BI | GAGCTC | 1 cut(s) | 149 |
| PspN4I | GGNNCC | 1 cut(s) | 6 |
| PsuI | RGATCY | 1 cut(s) | 157 |
| RsaI | GTAC | 3 cut(s) | 242, 255, 266 |
| RsaNI | GTAC | 3 cut(s) | 241, 254, 265 |
| RseI | CAYNNNNRTG | 1 cut(s) | 363 |
| SacI | GAGCTC | 1 cut(s) | 149 |
| SapI | GCTCTTC | 2 cut(s) | 306, 440 |
| SaqAI | TTAA | 3 cut(s) | 102, 162, 381 |
| Sau3AI | GATC | 3 cut(s) | 157, 247, 506 |
| ScaI | AGTACT | 1 cut(s) | 266 |
| SduI | GDGCHC | 2 cut(s) | 149, 233 |
| SfcI | CTRYAG | 1 cut(s) | 150 |
| SfoI | GGCGCC | 1 cut(s) | 6 |
| SfuI | TTCGAA | 1 cut(s) | 129 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 363 |
| Sse9I | AATT | 1 cut(s) | 552 |
| SseBI | AGGCCT | 1 cut(s) | 347 |
| SspDI | GGCGCC | 1 cut(s) | 4 |
| SspMI | CTAG | 2 cut(s) | 492, 558 |
| SstI | GAGCTC | 1 cut(s) | 149 |
| StuI | AGGCCT | 1 cut(s) | 347 |
| StyI | CCWWGG | 2 cut(s) | 74, 491 |
| TaqI | TCGA | 3 cut(s) | 129, 250, 536 |
| TasI | AATT | 1 cut(s) | 552 |
| TatI | WGTACW | 2 cut(s) | 240, 264 |
| Tru1I | TTAA | 3 cut(s) | 102, 162, 381 |
| Tru9I | TTAA | 3 cut(s) | 102, 162, 381 |
| TscAI | CASTG | 1 cut(s) | 309 |
| TspDTI | ATGAA | 1 cut(s) | 443 |
| TspRI | CASTG | 1 cut(s) | 309 |
| VneI | GTGCAC | 1 cut(s) | 229 |
| XceI | RCATGY | 1 cut(s) | 372 |
| XmaJI | CCTAGG | 1 cut(s) | 491 |
| XspI | CTAG | 2 cut(s) | 492, 558 |
| ZrmI | AGTACT | 1 cut(s) | 266 |