Rorug03G0352900
MYB Family

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0000152
Physical Location & Seq
Forward (+)
43324681 .. 43329018
4338 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0352900.1

Sequence Viewer

Length: 1239 bp
ATGAACGCTTTAGTAGCAACAAACAGAAATTTTAAGTTGGCTGCTCGACTGTTGGGATTGGACTCGAAGCTTGAACAGAGTTTACTCATACCATTTAGGGAAATCAAGGTCGAGTGCACTATCCCCAAAGATGATGGCAGTTTGGCTTCATATGTTGGCTTCAGAATTCAACATGACAATGCTAGAGGCCCCATGAAGGGAGGCATCAGATATCACCCAGAGGTTGAGCCAGACGAGGTGAATGCCTTAGCACAGCTGATGACATGGAAGACGGCGGTAGCTAACATCCCATATGGTGGTGCCAAGGGTGGGATAGGATGTGATCCAGGGAAGCTCAGTATTTCAGAGCTTGAGAGACTCACCAGAGTTTTCACCCAAAAGATTCATGATCTTATTGGAATCCACACTGATGTTCCAGCACCAGATATGGGCACTGGTCCACAGACCATGGCTTGGATACTTGATGAGTACTCCAAATTCCATGGCTACTCACCTGCAGTTGTCACTGGGAAACCTACTGATCTTGGTGGATCATTGGGAAGAGATGCAGCAACTGGAAGAGGAGTACTTTTTGCAACAGAGGCTTTACTGAATGAGTATGGGAAGACCATCTCTGGACAACGCTTTGTTATACAGGGATTTGGGAATGTGGGATCCTGGGCTGCCCAACTCATTCATGAGAAAGGTGGGAAAATAGTTGCAGTGAGTGACATCAGTGGAGCTATAAAGAACAGCCAAGGACTTGACATTCCAAGCCTACTCAACCATGTCAAGGAACAAAGAGGTGTCAAGGGCTTCCATGGCGGGGAGTCGATACAAGATTCCCACTCAATTTTAACTGAAGACTGTGACATTCTCATTCCTGCAGCACTTGGAGGTGTCATCAACAGGGAAAATGCAAATGATATAAAAGCCAAATTTATTATCGAAGCAGCTAATCATCCCACTGACCCCGAAGCGGATGAGATCTTGTCAAAGAAAGGTGTTGTTATTCTTCCTGATATATATGCAAACTCTGGAGGAGTCACTGTTAGTTACTTCGAATGGGTGCAGAACATCCAAGGTTTCCTGTGGGATGAAGAAAAAGTGAATAATGAGCTGAGGACTTACATGACTAAAGGCTTCAAAAATGTCAAGGAGATGTGCAAAACCCACAACTGTGACCTCCGGATGGGAGCCTTCACTCTCGGAGTTAACCGCGTTGCACGGGCTACTGTCCTCAGGGGATGGGAAGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

412

Amino Acids

44.75

Weight (kDa)

6.28

Isoelectric Point (pI)

27.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ELFV_dehydrog_N PF02812 33 - 159 4.7e-50 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
ELFV_dehydrog PF00208 176 - 409 6.2e-83 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000152)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G17950
fragaria_vesca FvH4_1g11910 FvH4_3g04400
malus_domestica MD02G1133000.v1.1 MD15G1245600.v1.1
prunus_persica Prupe.7G167700_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0314921 RchiOBHm_Chr1g0319941 RchiOBHm_Chr1g0321251 RchiOBHm_Chr1g0323021 RchiOBHm_Chr1g0324491 RchiOBHm_Chr1g0325171 RchiOBHm_Chr1g0360601 RchiOBHm_Chr1g0365451 RchiOBHm_Chr1g0381201 RchiOBHm_Chr2g0085401 RchiOBHm_Chr2g0099501 RchiOBHm_Chr2g0106981 RchiOBHm_Chr2g0130271 RchiOBHm_Chr2g0155121 RchiOBHm_Chr3g0455971 RchiOBHm_Chr3g0459501 RchiOBHm_Chr3g0478111 RchiOBHm_Chr3g0480661 RchiOBHm_Chr4g0388561 RchiOBHm_Chr4g0394421 RchiOBHm_Chr4g0424371 RchiOBHm_Chr5g0028631 RchiOBHm_Chr5g0069751 RchiOBHm_Chr5g0076691 RchiOBHm_Chr5g0076711 RchiOBHm_Chr5g0076721 RchiOBHm_Chr5g0079671 RchiOBHm_Chr5g0079731 RchiOBHm_Chr5g0079911 RchiOBHm_Chr5g0081741 RchiOBHm_Chr6g0255231 RchiOBHm_Chr6g0283251 RchiOBHm_Chr6g0300091 RchiOBHm_Chr7g0190751 RchiOBHm_Chr7g0240241
rosa_multiflora Rmu_co8441375.1_g000001 Rmu_sc0000110.1_g000027 Rmu_sc0000187.1_g000008 Rmu_sc0000240.1_g000065 Rmu_sc0000251.1_g000004 Rmu_sc0000272.1_g000025 Rmu_sc0000276.1_g000074 Rmu_sc0000284.1_g000010 Rmu_sc0000285.1_g000021 Rmu_sc0000360.1_g000034 Rmu_sc0000365.1_g000038 Rmu_sc0000368.1_g000013 Rmu_sc0000368.1_g000025 Rmu_sc0000770.1_g000044 Rmu_sc0000770.1_g000052 Rmu_sc0000795.1_g000098 Rmu_sc0000945.1_g000037 Rmu_sc0000949.1_g000023 Rmu_sc0000982.1_g000002 Rmu_sc0001424.1_g000004 Rmu_sc0001775.1_g000004 Rmu_sc0001952.1_g000010 Rmu_sc0002080.1_g000046 Rmu_sc0002141.1_g000016 Rmu_sc0002183.1_g000004 Rmu_sc0002187.1_g000040 Rmu_sc0002263.1_g000057 Rmu_sc0002351.1_g000061 Rmu_sc0002542.1_g000017 Rmu_sc0002751.1_g000003 Rmu_sc0002792.1_g000029 Rmu_sc0002798.1_g000020 Rmu_sc0002985.1_g000010 Rmu_sc0003124.1_g000019 Rmu_sc0003207.1_g000019 Rmu_sc0003237.1_g000003 Rmu_sc0003363.1_g000050 Rmu_sc0003443.1_g000025 Rmu_sc0003465.1_g000032 Rmu_sc0003500.1_g000012 Rmu_sc0003809.1_g000026 Rmu_sc0003859.1_g000032 Rmu_sc0004085.1_g000003 Rmu_sc0004085.1_g000008 Rmu_sc0004571.1_g000019 Rmu_sc0004753.1_g000006 Rmu_sc0004865.1_g000017 Rmu_sc0004881.1_g000007 Rmu_sc0005697.1_g000023 Rmu_sc0005812.1_g000020 Rmu_sc0007076.1_g000001 Rmu_sc0007801.1_g000003 Rmu_sc0008355.1_g000007 Rmu_sc0009380.1_g000006 Rmu_sc0010191.1_g000004 Rmu_sc0010252.1_g000006 Rmu_sc0011026.1_g000001 Rmu_sc0011824.1_g000003 Rmu_sc0012533.1_g000006 Rmu_sc0012640.1_g000006 Rmu_sc0014032.1_g000001 Rmu_sc0014545.1_g000001 Rmu_sc0014840.1_g000008 Rmu_sc0015060.1_g000013 Rmu_sc0018122.1_g000003 Rmu_sc0026563.1_g000004 Rmu_ssc0000213.1_g000057 Rmu_ssc0000213.1_g000091 Rmu_ssc0000262.1_g000021 Rmu_ssc0000282.1_g000021 Rmu_ssc0000295.1_g000041 Rmu_ssc0000438.1_g000002 Rmu_ssc0000472.1_g000015
rosa_roxburghii Rroxscaffold_1G00020080 Rroxscaffold_2G00084980 Rroxscaffold_2G00143020 Rroxscaffold_3G00261750 Rroxscaffold_3G00268610 Rroxscaffold_4G00312950 Rroxscaffold_7G00156650 Rroxscaffold_7G00215160
rosa_rugosa Rorug01G0077100 Rorug01G0201100 Rorug01G0246900 Rorug01G0256600 Rorug02G0080200 Rorug02G0089300 Rorug02G0090700 Rorug02G0177200 Rorug02G0187000 Rorug02G0192600 Rorug02G0232700 Rorug02G0262100 Rorug02G0328300 Rorug02G0408300 Rorug02G0641200 Rorug03G0155000 Rorug03G0185500 Rorug03G0256500 Rorug03G0291000 Rorug03G0299400 Rorug03G0317000 Rorug03G0326700 Rorug03G0330800 Rorug03G0339700 Rorug03G0352900 Rorug04G0029800 Rorug04G0029900 Rorug04G0048100 Rorug04G0075800 Rorug04G0124400 Rorug04G0212100 Rorug04G0212400 Rorug04G0253200 Rorug05G0116700 Rorug05G0146500 Rorug05G0211900 Rorug05G0215700 Rorug05G0216100 Rorug05G0220500 Rorug05G0339400 Rorug05G0352000 Rorug05G0356500.1 Rorug05G0398900 Rorug05G0474700 Rorug05G0511400 Rorug05G0540200 Rorug05G0541000 Rorug05G0572900.1 Rorug05G0584000 Rorug06G0000900 Rorug06G0014600 Rorug06G0018800 Rorug06G0026100 Rorug06G0042900 Rorug06G0082600 Rorug06G0133900 Rorug06G0229100 Rorug07G0321400 Rorug07G0326400 Rorug07G0326600.1
rosa_wichuraiana Rw0G017710 Rw1G012170 Rw1G039350 Rw2G010030 Rw3G024430 Rw5G045720 Rw7G025340 Rw7G040870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 502
Acc36I ACCTGC 1 cut(s) 502
AccB1I GGYRCC 1 cut(s) 299
AccB7I CCANNNNNTGG 2 cut(s) 296, 453
AccII CGCG 1 cut(s) 1200
AccIII TCCGGA 1 cut(s) 1167
AciI CCGC 4 cut(s) 275, 804, 959, 1198
AclWI GGATC 4 cut(s) 317, 538, 648, 661
AcsI RAATTY 4 cut(s) 28, 165, 476, 917
AcuI CTGAAG 2 cut(s) 145, 861
AfaI GTAC 2 cut(s) 470, 567
AgsI TTSAA 3 cut(s) 74, 170, 1126
AjnI CCWGG 2 cut(s) 325, 656
AleI CACNNNNGTG 1 cut(s) 1158
AluBI AGCT 8 cut(s) 70, 256, 281, 334, 349, 722, 935, 1099
AluI AGCT 8 cut(s) 70, 256, 281, 334, 349, 722, 935, 1099
Alw21I GWGCWC 1 cut(s) 119
Alw26I GTCTC 1 cut(s) 349
Alw44I GTGCAC 1 cut(s) 115
AlwI GGATC 4 cut(s) 317, 538, 648, 661
AlwNI CAGNNNCTG 1 cut(s) 554
Aor13HI TCCGGA 1 cut(s) 1167
AoxI GGCC 1 cut(s) 187
ApaLI GTGCAC 1 cut(s) 115
ApeKI GCWGC 5 cut(s) 41, 548, 662, 866, 932
ApoI RAATTY 4 cut(s) 28, 165, 476, 917
AspS9I GGNCC 2 cut(s) 188, 437
AsuHPI GGTGA 5 cut(s) 206, 250, 352, 364, 483
AsuII TTCGAA 1 cut(s) 1041
AvaII GGWCC 1 cut(s) 437
AxyI CCTNAGG 1 cut(s) 1220
BaeGI GKGCMC 2 cut(s) 119, 434
BamHI GGATCC 1 cut(s) 653
BanI GGYRCC 1 cut(s) 299
BbsI GAAGAC 3 cut(s) 275, 611, 849
Bbv12I GWGCWC 1 cut(s) 119
BbvCI CCTCAGC 1 cut(s) 1100
BbvI GCAGC 5 cut(s) 28, 560, 649, 878, 944
BccI CCATC 4 cut(s) 128, 617, 1165, 1221
BceAI ACGGC 1 cut(s) 288
BcgI CGANNNNNNTGC 2 cut(s) 224, 258
BciT130I CCWGG 2 cut(s) 327, 658
BciVI GTATCC 1 cut(s) 450
BcoDI GTCTC 1 cut(s) 349
BfaI CTAG 1 cut(s) 183
BfmI CTRYAG 2 cut(s) 495, 864
BfuAI ACCTGC 1 cut(s) 502
BfuI GTATCC 1 cut(s) 450
BglII AGATCT 1 cut(s) 966
BisI GCNGC 5 cut(s) 42, 549, 663, 867, 933
BlsI GCNGC 5 cut(s) 43, 550, 664, 868, 934
BmcAI AGTACT 2 cut(s) 470, 567
Bme1390I CCNGG 2 cut(s) 327, 658
Bme18I GGWCC 1 cut(s) 437
BmgT120I GGNCC 2 cut(s) 188, 437
BmiI GGNNCC 4 cut(s) 190, 301, 655, 1177
BmrFI CCNGG 2 cut(s) 327, 658
BmrI ACTGGG 1 cut(s) 516
BmsI GCATC 2 cut(s) 213, 535
BmuI ACTGGG 1 cut(s) 516
BpiI GAAGAC 3 cut(s) 275, 611, 849
BpmI CTGGAG 1 cut(s) 1038
Bpu10I CCTNAGC 2 cut(s) 247, 1100
Bpu14I TTCGAA 1 cut(s) 1041
BpuEI CTTGAG 1 cut(s) 371
BsaJI CCNNGG 8 cut(s) 303, 326, 447, 481, 657, 736, 799, 1060
BsaWI WCCGGW 1 cut(s) 1167
BsaXI ACNNNNNCTCC 2 cut(s) 1014, 1044
Bse1I ACTGG 3 cut(s) 439, 511, 559
Bse21I CCTNAGG 1 cut(s) 1220
BseAI TCCGGA 1 cut(s) 1167
BseBI CCWGG 2 cut(s) 327, 658
BseDI CCNNGG 8 cut(s) 303, 326, 447, 481, 657, 736, 799, 1060
BseGI GGATG 8 cut(s) 285, 323, 940, 967, 1056, 1081, 1176, 1232
BseMII CTCAG 3 cut(s) 349, 1091, 1234
BseNI ACTGG 3 cut(s) 439, 511, 559
BseRI GAGGAG 2 cut(s) 576, 1035
BseSI GKGCMC 2 cut(s) 119, 434
BseXI GCAGC 5 cut(s) 28, 560, 649, 878, 944
BsgI GTGCAG 1 cut(s) 1070
Bsh1236I CGCG 1 cut(s) 1200
BshFI GGCC 1 cut(s) 189
BshNI GGYRCC 1 cut(s) 299
BsiHKAI GWGCWC 1 cut(s) 119
BsiSI CCGG 1 cut(s) 1168
BsmAI GTCTC 1 cut(s) 349
BsmI GAATGC 1 cut(s) 247
BsnI GGCC 1 cut(s) 189
Bsp119I TTCGAA 1 cut(s) 1041
Bsp1286I GDGCHC 2 cut(s) 119, 434
Bsp13I TCCGGA 1 cut(s) 1167
Bsp143I GATC 6 cut(s) 322, 388, 520, 530, 653, 966
Bsp19I CCATGG 3 cut(s) 447, 481, 799
BspACI CCGC 4 cut(s) 275, 804, 959, 1198
BspANI GGCC 1 cut(s) 189
BspCNI CTCAG 3 cut(s) 348, 1092, 1233
BspEI TCCGGA 1 cut(s) 1167
BspFNI CGCG 1 cut(s) 1200
BspHI TCATGA 2 cut(s) 385, 676
BspLI GGNNCC 4 cut(s) 190, 301, 655, 1177
BspMAI CTGCAG 2 cut(s) 499, 868
BspMI ACCTGC 1 cut(s) 502
BspPI GGATC 4 cut(s) 317, 538, 648, 661
BspT104I TTCGAA 1 cut(s) 1041
BspT107I GGYRCC 1 cut(s) 299
BsrI ACTGG 3 cut(s) 439, 511, 559
BssECI CCNNGG 8 cut(s) 303, 326, 447, 481, 657, 736, 799, 1060
BssMI GATC 6 cut(s) 322, 388, 520, 530, 653, 966
BssT1I CCWWGG 6 cut(s) 303, 447, 481, 736, 799, 1060
Bst2UI CCWGG 2 cut(s) 327, 658
Bst4CI ACNGT 5 cut(s) 51, 848, 1030, 1160, 1216
Bst6I CTCTTC 2 cut(s) 535, 553
BstBI TTCGAA 1 cut(s) 1041
BstDEI CTNAG 4 cut(s) 247, 335, 1100, 1220
BstDSI CCRYGG 3 cut(s) 447, 481, 799
BstF5I GGATG 8 cut(s) 285, 323, 940, 967, 1056, 1081, 1176, 1232
BstFNI CGCG 1 cut(s) 1200
BstKTI GATC 6 cut(s) 325, 391, 523, 533, 656, 969
BstMAI GTCTC 1 cut(s) 349
BstMBI GATC 6 cut(s) 322, 388, 520, 530, 653, 966
BstMWI GCNNNNNNNGC 3 cut(s) 14, 581, 801
BstNI CCWGG 2 cut(s) 327, 658
BstSCI CCNGG 2 cut(s) 325, 656
BstSFI CTRYAG 2 cut(s) 495, 864
BstSLI GKGCMC 2 cut(s) 119, 434
BstUI CGCG 1 cut(s) 1200
BstV1I GCAGC 5 cut(s) 28, 560, 649, 878, 944
BstV2I GAAGAC 3 cut(s) 275, 611, 849
BstX2I RGATCY 2 cut(s) 653, 966
BstYI RGATCY 2 cut(s) 653, 966
Bsu36I CCTNAGG 1 cut(s) 1220
BsuI GTATCC 1 cut(s) 450
BsuRI GGCC 1 cut(s) 189
BtgI CCRYGG 3 cut(s) 447, 481, 799
BtsCI GGATG 8 cut(s) 285, 323, 940, 967, 1056, 1081, 1176, 1232
BtsI GCAGTG 1 cut(s) 708
BtsIMutI CAGTG 7 cut(s) 405, 432, 504, 708, 721, 945, 1026
BveI ACCTGC 1 cut(s) 502
CaiI CAGNNNCTG 1 cut(s) 554
CciI TCATGA 2 cut(s) 385, 676
Cfr13I GGNCC 2 cut(s) 188, 437
Csp6I GTAC 2 cut(s) 469, 566
CviQI GTAC 2 cut(s) 469, 566
DdeI CTNAG 4 cut(s) 247, 335, 1100, 1220
DpnI GATC 6 cut(s) 324, 390, 522, 532, 655, 968
DpnII GATC 6 cut(s) 322, 388, 520, 530, 653, 966
Eam1104I CTCTTC 2 cut(s) 535, 553
EarI CTCTTC 2 cut(s) 535, 553
Eco130I CCWWGG 6 cut(s) 303, 447, 481, 736, 799, 1060
Eco32I GATATC 1 cut(s) 212
Eco47I GGWCC 1 cut(s) 437
Eco57I CTGAAG 2 cut(s) 145, 861
Eco81I CCTNAGG 1 cut(s) 1220
EcoO109I RGGNCCY 1 cut(s) 188
EcoRI GAATTC 1 cut(s) 165
EcoRII CCWGG 2 cut(s) 325, 656
EcoRV GATATC 1 cut(s) 212
EcoT14I CCWWGG 6 cut(s) 303, 447, 481, 736, 799, 1060
ErhI CCWWGG 6 cut(s) 303, 447, 481, 736, 799, 1060
FauI CCCGC 1 cut(s) 797
FauNDI CATATG 2 cut(s) 151, 292
Fnu4HI GCNGC 5 cut(s) 42, 549, 663, 867, 933
FokI GGATG 7 cut(s) 272, 330, 927, 974, 1043, 1088, 1183
Fsp4HI GCNGC 5 cut(s) 42, 549, 663, 867, 933
FspBI CTAG 1 cut(s) 183
GluI GCNGC 5 cut(s) 42, 549, 663, 867, 933
GsuI CTGGAG 1 cut(s) 1038
HaeIII GGCC 1 cut(s) 189
HapII CCGG 1 cut(s) 1168
HincII GTYRAC 1 cut(s) 1195
HindII GTYRAC 1 cut(s) 1195
HindIII AAGCTT 1 cut(s) 68
HinfI GANTC 7 cut(s) 62, 357, 382, 399, 809, 821, 1023
HpaI GTTAAC 1 cut(s) 1195
HpaII CCGG 1 cut(s) 1168
HphI GGTGA 5 cut(s) 206, 250, 352, 364, 483
Hpy166II GTNNAC 4 cut(s) 83, 117, 440, 1195
Hpy188I TCNGA 4 cut(s) 164, 209, 346, 1190
Hpy188III TCNNGA 6 cut(s) 386, 615, 677, 998, 1017, 1168
Hpy8I GTNNAC 4 cut(s) 83, 117, 440, 1195
HpyAV CCTTC 2 cut(s) 190, 1189
HpyCH4III ACNGT 5 cut(s) 51, 848, 1030, 1160, 1216
HpyF10VI GCNNNNNNNGC 3 cut(s) 14, 581, 801
HpyF3I CTNAG 4 cut(s) 247, 335, 1100, 1220
Kpn2I TCCGGA 1 cut(s) 1167
KspAI GTTAAC 1 cut(s) 1195
Kzo9I GATC 6 cut(s) 322, 388, 520, 530, 653, 966
LmnI GCTCC 2 cut(s) 719, 1175
Lsp1109I GCAGC 5 cut(s) 28, 560, 649, 878, 944
LweI GCATC 2 cut(s) 213, 535
MaeI CTAG 1 cut(s) 183
MaeIII GTNAC 6 cut(s) 502, 707, 848, 1024, 1034, 1160
MalI GATC 6 cut(s) 324, 390, 522, 532, 655, 968
MboI GATC 6 cut(s) 322, 388, 520, 530, 653, 966
MboII GAAGA 7 cut(s) 280, 552, 570, 616, 854, 986, 1091
MflI RGATCY 2 cut(s) 653, 966
MhlI GDGCHC 2 cut(s) 119, 434
MluCI AATT 5 cut(s) 28, 165, 476, 831, 917
MlyI GAGTC 4 cut(s) 56, 351, 818, 1032
MroI TCCGGA 1 cut(s) 1167
MseI TTAA 3 cut(s) 33, 836, 1194
MslI CAYNNNNRTG 3 cut(s) 177, 408, 1158
MspA1I CMGCKG 1 cut(s) 256
MspI CCGG 1 cut(s) 1168
MspR9I CCNGG 2 cut(s) 327, 658
Mva1269I GAATGC 1 cut(s) 247
MvaI CCWGG 2 cut(s) 327, 658
MvnI CGCG 1 cut(s) 1200
MwoI GCNNNNNNNGC 3 cut(s) 14, 581, 801
NcoI CCATGG 3 cut(s) 447, 481, 799
NdeI CATATG 2 cut(s) 151, 292
NdeII GATC 6 cut(s) 322, 388, 520, 530, 653, 966
NlaIV GGNNCC 4 cut(s) 190, 301, 655, 1177
NmuCI GTSAC 5 cut(s) 502, 707, 848, 1024, 1160
NspV TTCGAA 1 cut(s) 1041
OliI CACNNNNGTG 1 cut(s) 1158
PagI TCATGA 2 cut(s) 385, 676
PaqCI CACCTGC 1 cut(s) 502
PctI GAATGC 1 cut(s) 247
PfeI GAWTC 3 cut(s) 382, 399, 821
PflMI CCANNNNNTGG 2 cut(s) 296, 453
PkrI GCNGC 5 cut(s) 43, 550, 664, 868, 934
PleI GAGTC 4 cut(s) 56, 351, 817, 1031
PpsI GAGTC 4 cut(s) 56, 351, 817, 1031
Psp6I CCWGG 2 cut(s) 325, 656
PspGI CCWGG 2 cut(s) 325, 656
PspN4I GGNNCC 4 cut(s) 190, 301, 655, 1177
PspPI GGNCC 2 cut(s) 188, 437
PsrI GAACNNNNNNTAC 2 cut(s) 66, 98
PstI CTGCAG 2 cut(s) 499, 868
PstNI CAGNNNCTG 1 cut(s) 554
PsuI RGATCY 2 cut(s) 653, 966
PvuII CAGCTG 1 cut(s) 256
RsaI GTAC 2 cut(s) 470, 567
RsaNI GTAC 2 cut(s) 469, 566
RseI CAYNNNNRTG 3 cut(s) 177, 408, 1158
SaqAI TTAA 3 cut(s) 33, 836, 1194
SatI GCNGC 5 cut(s) 42, 549, 663, 867, 933
Sau3AI GATC 6 cut(s) 322, 388, 520, 530, 653, 966
Sau96I GGNCC 2 cut(s) 188, 437
ScaI AGTACT 2 cut(s) 470, 567
SchI GAGTC 4 cut(s) 56, 351, 818, 1032
ScrFI CCNGG 2 cut(s) 327, 658
SduI GDGCHC 2 cut(s) 119, 434
SfaNI GCATC 2 cut(s) 213, 535
SfcI CTRYAG 2 cut(s) 495, 864
SfuI TTCGAA 1 cut(s) 1041
SinI GGWCC 1 cut(s) 437
SmiMI CAYNNNNRTG 3 cut(s) 177, 408, 1158
SmlI CTYRAG 1 cut(s) 350
SmoI CTYRAG 1 cut(s) 350
Sse9I AATT 5 cut(s) 28, 165, 476, 831, 917
SsiI CCGC 4 cut(s) 275, 804, 959, 1198
SspMI CTAG 1 cut(s) 183
StyD4I CCNGG 2 cut(s) 325, 656
StyI CCWWGG 6 cut(s) 303, 447, 481, 736, 799, 1060
TaaI ACNGT 5 cut(s) 51, 848, 1030, 1160, 1216
TaqI TCGA 6 cut(s) 46, 65, 111, 812, 927, 1041
TasI AATT 5 cut(s) 28, 165, 476, 831, 917
TatI WGTACW 2 cut(s) 468, 565
TfiI GAWTC 3 cut(s) 382, 399, 821
Tru1I TTAA 3 cut(s) 33, 836, 1194
Tru9I TTAA 3 cut(s) 33, 836, 1194
TscAI CASTG 7 cut(s) 412, 439, 511, 708, 721, 952, 1033
TseFI GTSAC 5 cut(s) 502, 707, 848, 1024, 1160
TseI GCWGC 5 cut(s) 41, 548, 662, 866, 932
Tsp45I GTSAC 5 cut(s) 502, 707, 848, 1024, 1160
TspDTI ATGAA 6 cut(s) 17, 138, 209, 374, 665, 1092
TspRI CASTG 7 cut(s) 412, 439, 511, 708, 721, 952, 1033
Van91I CCANNNNNTGG 2 cut(s) 296, 453
VneI GTGCAC 1 cut(s) 115
VpaK11BI GGWCC 1 cut(s) 437
XapI RAATTY 4 cut(s) 28, 165, 476, 917
XspI CTAG 1 cut(s) 183
ZrmI AGTACT 2 cut(s) 470, 567
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.