Homeodomain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| ABC_membrane | PF00664 | 3 - 62 | 4.8e-07 | ABC transporter transmembrane region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 517 |
| AcsI | RAATTY | 1 cut(s) | 104 |
| AcuI | CTGAAG | 1 cut(s) | 134 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 307, 500 |
| AgsI | TTSAA | 3 cut(s) | 184, 479, 590 |
| AjnI | CCWGG | 1 cut(s) | 343 |
| AluBI | AGCT | 6 cut(s) | 42, 77, 95, 218, 289, 424 |
| AluI | AGCT | 6 cut(s) | 42, 77, 95, 218, 289, 424 |
| Alw21I | GWGCWC | 1 cut(s) | 44 |
| Alw26I | GTCTC | 1 cut(s) | 209 |
| AlwI | GGATC | 1 cut(s) | 517 |
| ApeKI | GCWGC | 6 cut(s) | 95, 289, 325, 410, 434, 452 |
| ApoI | RAATTY | 1 cut(s) | 104 |
| AspLEI | GCGC | 1 cut(s) | 140 |
| AspS9I | GGNCC | 1 cut(s) | 4 |
| AsuHPI | GGTGA | 1 cut(s) | 477 |
| AvaII | GGWCC | 1 cut(s) | 4 |
| BanII | GRGCYC | 1 cut(s) | 44 |
| BauI | CACGAG | 1 cut(s) | 43 |
| Bbv12I | GWGCWC | 1 cut(s) | 44 |
| BbvI | GCAGC | 6 cut(s) | 82, 276, 312, 397, 421, 439 |
| BciT130I | CCWGG | 1 cut(s) | 345 |
| BcoDI | GTCTC | 1 cut(s) | 209 |
| BfaI | CTAG | 1 cut(s) | 89 |
| BisI | GCNGC | 6 cut(s) | 96, 290, 326, 411, 435, 453 |
| BlsI | GCNGC | 6 cut(s) | 97, 291, 327, 412, 436, 454 |
| Bme1390I | CCNGG | 1 cut(s) | 345 |
| Bme18I | GGWCC | 1 cut(s) | 4 |
| BmgT120I | GGNCC | 1 cut(s) | 4 |
| BmiI | GGNNCC | 2 cut(s) | 402, 444 |
| BmrFI | CCNGG | 1 cut(s) | 345 |
| BmsI | GCATC | 2 cut(s) | 108, 184 |
| BpmI | CTGGAG | 1 cut(s) | 234 |
| Bpu10I | CCTNAGC | 1 cut(s) | 122 |
| BsaI | GGTCTC | 1 cut(s) | 209 |
| BsaJI | CCNNGG | 2 cut(s) | 344, 360 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 307, 500 |
| BseBI | CCWGG | 1 cut(s) | 345 |
| BseDI | CCNNGG | 2 cut(s) | 344, 360 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 307, 500 |
| BseMII | CTCAG | 3 cut(s) | 266, 411, 510 |
| BseXI | GCAGC | 6 cut(s) | 82, 276, 312, 397, 421, 439 |
| BsgI | GTGCAG | 6 cut(s) | 81, 279, 311, 420, 438, 449 |
| BsiHKAI | GWGCWC | 1 cut(s) | 44 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 307, 500 |
| BsmAI | GTCTC | 1 cut(s) | 209 |
| Bso31I | GGTCTC | 1 cut(s) | 209 |
| Bsp1286I | GDGCHC | 1 cut(s) | 44 |
| Bsp143I | GATC | 1 cut(s) | 522 |
| BspCNI | CTCAG | 3 cut(s) | 267, 412, 511 |
| BspLI | GGNNCC | 2 cut(s) | 402, 444 |
| BspPI | GGATC | 1 cut(s) | 517 |
| BspTNI | GGTCTC | 1 cut(s) | 209 |
| BssECI | CCNNGG | 2 cut(s) | 344, 360 |
| BssMI | GATC | 1 cut(s) | 522 |
| BssSI | CACGAG | 1 cut(s) | 43 |
| BssT1I | CCWWGG | 1 cut(s) | 360 |
| Bst2BI | CACGAG | 1 cut(s) | 43 |
| Bst2UI | CCWGG | 1 cut(s) | 345 |
| Bst6I | CTCTTC | 1 cut(s) | 275 |
| BstDEI | CTNAG | 5 cut(s) | 122, 275, 372, 420, 519 |
| BstHHI | GCGC | 1 cut(s) | 140 |
| BstKTI | GATC | 1 cut(s) | 525 |
| BstMAI | GTCTC | 1 cut(s) | 209 |
| BstMBI | GATC | 1 cut(s) | 522 |
| BstNI | CCWGG | 1 cut(s) | 345 |
| BstSCI | CCNGG | 1 cut(s) | 343 |
| BstV1I | GCAGC | 6 cut(s) | 82, 276, 312, 397, 421, 439 |
| BstX2I | RGATCY | 1 cut(s) | 522 |
| BstYI | RGATCY | 1 cut(s) | 522 |
| BtsI | GCAGTG | 1 cut(s) | 328 |
| BtsIMutI | CAGTG | 1 cut(s) | 328 |
| CfoI | GCGC | 1 cut(s) | 140 |
| Cfr13I | GGNCC | 1 cut(s) | 4 |
| CviAII | CATG | 3 cut(s) | 22, 407, 449 |
| CviJI | RGCY | 8 cut(s) | 42, 65, 77, 95, 218, 289, 376, 424 |
| CviKI_1 | RGCY | 8 cut(s) | 42, 65, 77, 95, 218, 289, 376, 424 |
| DdeI | CTNAG | 5 cut(s) | 122, 275, 372, 420, 519 |
| DpnI | GATC | 1 cut(s) | 524 |
| DpnII | GATC | 1 cut(s) | 522 |
| Eam1104I | CTCTTC | 1 cut(s) | 275 |
| EarI | CTCTTC | 1 cut(s) | 275 |
| Ecl136II | GAGCTC | 1 cut(s) | 42 |
| Eco130I | CCWWGG | 1 cut(s) | 360 |
| Eco24I | GRGCYC | 1 cut(s) | 44 |
| Eco31I | GGTCTC | 1 cut(s) | 209 |
| Eco47I | GGWCC | 1 cut(s) | 4 |
| Eco53kI | GAGCTC | 1 cut(s) | 42 |
| Eco57I | CTGAAG | 1 cut(s) | 134 |
| EcoICRI | GAGCTC | 1 cut(s) | 42 |
| EcoRII | CCWGG | 1 cut(s) | 343 |
| EcoT14I | CCWWGG | 1 cut(s) | 360 |
| EcoT38I | GRGCYC | 1 cut(s) | 44 |
| ErhI | CCWWGG | 1 cut(s) | 360 |
| FaeI | CATG | 3 cut(s) | 25, 410, 452 |
| FaiI | YATR | 8 cut(s) | 23, 53, 368, 408, 415, 450, 532, 551 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 299, 331 |
| FatI | CATG | 3 cut(s) | 21, 406, 448 |
| Fnu4HI | GCNGC | 6 cut(s) | 96, 290, 326, 411, 435, 453 |
| FriOI | GRGCYC | 1 cut(s) | 44 |
| Fsp4HI | GCNGC | 6 cut(s) | 96, 290, 326, 411, 435, 453 |
| FspBI | CTAG | 1 cut(s) | 89 |
| GlaI | GCGC | 1 cut(s) | 139 |
| GluI | GCNGC | 6 cut(s) | 96, 290, 326, 411, 435, 453 |
| GsuI | CTGGAG | 1 cut(s) | 234 |
| HhaI | GCGC | 1 cut(s) | 140 |
| Hin1II | CATG | 3 cut(s) | 25, 410, 452 |
| Hin6I | GCGC | 1 cut(s) | 138 |
| HinP1I | GCGC | 1 cut(s) | 138 |
| HincII | GTYRAC | 1 cut(s) | 351 |
| HindII | GTYRAC | 1 cut(s) | 351 |
| HinfI | GANTC | 2 cut(s) | 158, 184 |
| HphI | GGTGA | 1 cut(s) | 477 |
| Hpy166II | GTNNAC | 2 cut(s) | 19, 351 |
| Hpy188I | TCNGA | 5 cut(s) | 114, 271, 421, 429, 596 |
| Hpy188III | TCNNGA | 4 cut(s) | 89, 213, 476, 518 |
| Hpy8I | GTNNAC | 2 cut(s) | 19, 351 |
| HpyAV | CCTTC | 2 cut(s) | 17, 524 |
| HpyF3I | CTNAG | 5 cut(s) | 122, 275, 372, 420, 519 |
| Hsp92II | CATG | 3 cut(s) | 25, 410, 452 |
| HspAI | GCGC | 1 cut(s) | 138 |
| Kzo9I | GATC | 1 cut(s) | 522 |
| LmnI | GCTCC | 2 cut(s) | 39, 215 |
| Lsp1109I | GCAGC | 6 cut(s) | 82, 276, 312, 397, 421, 439 |
| LweI | GCATC | 2 cut(s) | 108, 184 |
| MaeI | CTAG | 1 cut(s) | 89 |
| MalI | GATC | 1 cut(s) | 524 |
| MboI | GATC | 1 cut(s) | 522 |
| MboII | GAAGA | 2 cut(s) | 127, 292 |
| MflI | RGATCY | 1 cut(s) | 522 |
| MhlI | GDGCHC | 1 cut(s) | 44 |
| MluCI | AATT | 4 cut(s) | 104, 208, 336, 580 |
| MnlI | CCTC | 7 cut(s) | 270, 276, 304, 391, 414, 456, 504 |
| MspR9I | CCNGG | 1 cut(s) | 345 |
| MvaI | CCWGG | 1 cut(s) | 345 |
| NdeII | GATC | 1 cut(s) | 522 |
| NlaIII | CATG | 3 cut(s) | 25, 410, 452 |
| NlaIV | GGNNCC | 2 cut(s) | 402, 444 |
| PfeI | GAWTC | 2 cut(s) | 158, 184 |
| PkrI | GCNGC | 6 cut(s) | 97, 291, 327, 412, 436, 454 |
| Psp124BI | GAGCTC | 1 cut(s) | 44 |
| Psp6I | CCWGG | 1 cut(s) | 343 |
| PspGI | CCWGG | 1 cut(s) | 343 |
| PspN4I | GGNNCC | 2 cut(s) | 402, 444 |
| PspPI | GGNCC | 1 cut(s) | 4 |
| PsuI | RGATCY | 1 cut(s) | 522 |
| SacI | GAGCTC | 1 cut(s) | 44 |
| SatI | GCNGC | 6 cut(s) | 96, 290, 326, 411, 435, 453 |
| Sau3AI | GATC | 1 cut(s) | 522 |
| Sau96I | GGNCC | 1 cut(s) | 4 |
| ScrFI | CCNGG | 1 cut(s) | 345 |
| SduI | GDGCHC | 1 cut(s) | 44 |
| SfaNI | GCATC | 2 cut(s) | 108, 184 |
| SinI | GGWCC | 1 cut(s) | 4 |
| Sse9I | AATT | 4 cut(s) | 104, 208, 336, 580 |
| SspMI | CTAG | 1 cut(s) | 89 |
| SstI | GAGCTC | 1 cut(s) | 44 |
| StyD4I | CCNGG | 1 cut(s) | 343 |
| StyI | CCWWGG | 1 cut(s) | 360 |
| TasI | AATT | 4 cut(s) | 104, 208, 336, 580 |
| TfiI | GAWTC | 2 cut(s) | 158, 184 |
| TscAI | CASTG | 1 cut(s) | 335 |
| TseI | GCWGC | 6 cut(s) | 95, 289, 325, 410, 434, 452 |
| TspGWI | ACGGA | 1 cut(s) | 190 |
| TspRI | CASTG | 1 cut(s) | 335 |
| VpaK11BI | GGWCC | 1 cut(s) | 4 |
| XapI | RAATTY | 1 cut(s) | 104 |
| XbaI | TCTAGA | 1 cut(s) | 88 |
| XspI | CTAG | 1 cut(s) | 89 |