Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0000152

Physical Location & Seq

Genomic Coordinates Forward (+)

35394097 .. 35396570

Gene Structure 2474 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0246900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 987 bp

ATGGAAGAAGTCAGAGGCACAGTTTGTGTAACTGGTGGAACAGGATATATAGCCTCATGGCTGATTCTGAGGCTGCTTCAGCATGGTTACTCGGTTCGAGCCACCATTAGATCCAACCCTGCTAAAGGCAAGAGAGATATCAGCTACCTGACAAGCCTTCCAGGAGCACAAGAGAAACTCCAAATCTTCCATGCAGATCTCAACAACCCCGAGACCTTCAACGACGCCATCCAAGGCTGCACCGGTGTCTTCCACCTTGCTCACCCCATGGACGTTGAAGGCAAAGAACCCGAGGAAACCGTAACCAAACGAGCCCTGGAAGGAACACTAGGCATTTTGAAGGCATGCCTAAGTTGCAAGACGGTGAGGCGAGTGGTTTACACATCCAGTTTGGCCACAATATTGTACAACAGCAAGCGTCTTGAAGAAACTGATGAAAACACATGGAGTGAGGTTGATGTATGCAGAAGTAACAAGCTTGTGAGCTCTTCTTACTTGGTTTCCAAGACTCTGGTGGAGAGGACAGCCCTGGAATTTGCAGAGAGGAATGGTTTGGATCTTGTCACTGTGGTTTTGCCTATAGTAGTTGGACCCTTCGTTTGTCCAAATGTTCCTGCTTCCGTGTACATGGGCATGGCTCCCATTTTTGGTGACCAAGAGCAATGTAAATATCTTGTTAGCACATATATGGTGCACATAGATGATGTGGCGAGTGCCCATATCTTCCTTCTTGAACATGCTAATGCAAAAGGGAGGTACATTTGTTCGTCGATCCAAACAACGATTCATGAGTTATATGACTTTCTTTCCGCAAGATACCCAGAACTTCATATATCAATACCAGATCAGTTAATGGAGATTAAAGGTTACAAAGGAACTAATGTATCATCAACGAAACTGTTGAATACTGGCTTCAAATTTAAATGCGGCCTTGGGGAAATGTTTGATGGCGCTATTCAATCTTGCAAAGAGAAGGGTTTTCTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000323 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005765 GO:0005773 GO:0005774 GO:0005783 GO:0005789 GO:0005798 GO:0012505 GO:0016020 GO:0016021 GO:0030176 GO:0030660 GO:0031090 GO:0031224 GO:0031227 GO:0031410 GO:0031982 GO:0031984 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044433 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0071458 GO:0071556 GO:0097708 GO:0098552 GO:0098553 GO:0098554 GO:0098562 GO:0098588 GO:0098805 GO:0098827 GO:0098852

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PA Peptidase_A22B

Protein Analysis

328

Amino Acids

36.31

Weight (kDa)

6.32

Isoelectric Point (pI)

39.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NmrA	PF05368	7 - 127	1.9e-08	NmrA-like family
Epimerase	PF01370	8 - 250	5.8e-24	NAD dependent epimerase/dehydratase family
3Beta_HSD	PF01073	10 - 192	1.3e-17	3-beta hydroxysteroid dehydrogenase/isomerase family
GDP_Man_Dehyd	PF16363	10 - 267	2e-14	GDP-mannose 4,6 dehydratase
NAD_binding_4	PF07993	10 - 197	1.2e-11	Male sterility protein
NAD_binding_10	PF13460	12 - 133	2e-07	NAD(P)H-binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000152)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17950
fragaria_vesca	FvH4_1g11910 FvH4_3g04400
malus_domestica	MD02G1133000.v1.1 MD15G1245600.v1.1
prunus_persica	Prupe.7G167700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0314921 RchiOBHm_Chr1g0319941 RchiOBHm_Chr1g0321251 RchiOBHm_Chr1g0323021 RchiOBHm_Chr1g0324491 RchiOBHm_Chr1g0325171 RchiOBHm_Chr1g0360601 RchiOBHm_Chr1g0365451 RchiOBHm_Chr1g0381201 RchiOBHm_Chr2g0085401 RchiOBHm_Chr2g0099501 RchiOBHm_Chr2g0106981 RchiOBHm_Chr2g0130271 RchiOBHm_Chr2g0155121 RchiOBHm_Chr3g0455971 RchiOBHm_Chr3g0459501 RchiOBHm_Chr3g0478111 RchiOBHm_Chr3g0480661 RchiOBHm_Chr4g0388561 RchiOBHm_Chr4g0394421 RchiOBHm_Chr4g0424371 RchiOBHm_Chr5g0028631 RchiOBHm_Chr5g0069751 RchiOBHm_Chr5g0076691 RchiOBHm_Chr5g0076711 RchiOBHm_Chr5g0076721 RchiOBHm_Chr5g0079671 RchiOBHm_Chr5g0079731 RchiOBHm_Chr5g0079911 RchiOBHm_Chr5g0081741 RchiOBHm_Chr6g0255231 RchiOBHm_Chr6g0283251 RchiOBHm_Chr6g0300091 RchiOBHm_Chr7g0190751 RchiOBHm_Chr7g0240241
rosa_multiflora	Rmu_co8441375.1_g000001 Rmu_sc0000110.1_g000027 Rmu_sc0000187.1_g000008 Rmu_sc0000240.1_g000065 Rmu_sc0000251.1_g000004 Rmu_sc0000272.1_g000025 Rmu_sc0000276.1_g000074 Rmu_sc0000284.1_g000010 Rmu_sc0000285.1_g000021 Rmu_sc0000360.1_g000034 Rmu_sc0000365.1_g000038 Rmu_sc0000368.1_g000013 Rmu_sc0000368.1_g000025 Rmu_sc0000770.1_g000044 Rmu_sc0000770.1_g000052 Rmu_sc0000795.1_g000098 Rmu_sc0000945.1_g000037 Rmu_sc0000949.1_g000023 Rmu_sc0000982.1_g000002 Rmu_sc0001424.1_g000004 Rmu_sc0001775.1_g000004 Rmu_sc0001952.1_g000010 Rmu_sc0002080.1_g000046 Rmu_sc0002141.1_g000016 Rmu_sc0002183.1_g000004 Rmu_sc0002187.1_g000040 Rmu_sc0002263.1_g000057 Rmu_sc0002351.1_g000061 Rmu_sc0002542.1_g000017 Rmu_sc0002751.1_g000003 Rmu_sc0002792.1_g000029 Rmu_sc0002798.1_g000020 Rmu_sc0002985.1_g000010 Rmu_sc0003124.1_g000019 Rmu_sc0003207.1_g000019 Rmu_sc0003237.1_g000003 Rmu_sc0003363.1_g000050 Rmu_sc0003443.1_g000025 Rmu_sc0003465.1_g000032 Rmu_sc0003500.1_g000012 Rmu_sc0003809.1_g000026 Rmu_sc0003859.1_g000032 Rmu_sc0004085.1_g000003 Rmu_sc0004085.1_g000008 Rmu_sc0004571.1_g000019 Rmu_sc0004753.1_g000006 Rmu_sc0004865.1_g000017 Rmu_sc0004881.1_g000007 Rmu_sc0005697.1_g000023 Rmu_sc0005812.1_g000020 Rmu_sc0007076.1_g000001 Rmu_sc0007801.1_g000003 Rmu_sc0008355.1_g000007 Rmu_sc0009380.1_g000006 Rmu_sc0010191.1_g000004 Rmu_sc0010252.1_g000006 Rmu_sc0011026.1_g000001 Rmu_sc0011824.1_g000003 Rmu_sc0012533.1_g000006 Rmu_sc0012640.1_g000006 Rmu_sc0014032.1_g000001 Rmu_sc0014545.1_g000001 Rmu_sc0014840.1_g000008 Rmu_sc0015060.1_g000013 Rmu_sc0018122.1_g000003 Rmu_sc0026563.1_g000004 Rmu_ssc0000213.1_g000057 Rmu_ssc0000213.1_g000091 Rmu_ssc0000262.1_g000021 Rmu_ssc0000282.1_g000021 Rmu_ssc0000295.1_g000041 Rmu_ssc0000438.1_g000002 Rmu_ssc0000472.1_g000015
rosa_roxburghii	Rroxscaffold_1G00020080 Rroxscaffold_2G00084980 Rroxscaffold_2G00143020 Rroxscaffold_3G00261750 Rroxscaffold_3G00268610 Rroxscaffold_4G00312950 Rroxscaffold_7G00156650 Rroxscaffold_7G00215160
rosa_rugosa	Rorug01G0077100 Rorug01G0201100 Rorug01G0246900 Rorug01G0256600 Rorug02G0080200 Rorug02G0089300 Rorug02G0090700 Rorug02G0177200 Rorug02G0187000 Rorug02G0192600 Rorug02G0232700 Rorug02G0262100 Rorug02G0328300 Rorug02G0408300 Rorug02G0641200 Rorug03G0155000 Rorug03G0185500 Rorug03G0256500 Rorug03G0291000 Rorug03G0299400 Rorug03G0317000 Rorug03G0326700 Rorug03G0330800 Rorug03G0339700 Rorug03G0352900 Rorug04G0029800 Rorug04G0029900 Rorug04G0048100 Rorug04G0075800 Rorug04G0124400 Rorug04G0212100 Rorug04G0212400 Rorug04G0253200 Rorug05G0116700 Rorug05G0146500 Rorug05G0211900 Rorug05G0215700 Rorug05G0216100 Rorug05G0220500 Rorug05G0339400 Rorug05G0352000 Rorug05G0356500.1 Rorug05G0398900 Rorug05G0474700 Rorug05G0511400 Rorug05G0540200 Rorug05G0541000 Rorug05G0572900.1 Rorug05G0584000 Rorug06G0000900 Rorug06G0014600 Rorug06G0018800 Rorug06G0026100 Rorug06G0042900 Rorug06G0082600 Rorug06G0133900 Rorug06G0229100 Rorug07G0321400 Rorug07G0326400 Rorug07G0326600.1
rosa_wichuraiana	Rw0G017710 Rw1G012170 Rw1G039350 Rw2G010030 Rw3G024430 Rw5G045720 Rw7G025340 Rw7G040870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	2 cut(s)	810, 927
AclWI	GGATC	3 cut(s)	105, 564, 766
AcoI	YGGCCR	1 cut(s)	393
AcsI	RAATTY	2 cut(s)	533, 917
AcuI	CTGAAG	1 cut(s)	62
AcyI	GRCGYC	1 cut(s)	225
AfaI	GTAC	3 cut(s)	407, 626, 758
AfiI	CCNNNNNNNGG	2 cut(s)	125, 647
AgeI	ACCGGT	1 cut(s)	242
AgsI	TTSAA	8 cut(s)	220, 278, 340, 425, 734, 904, 916, 959
AjnI	CCWGG	3 cut(s)	160, 315, 528
AjuI	GAANNNNNNNTTGG	2 cut(s)	768, 800
AluBI	AGCT	3 cut(s)	144, 478, 486
AluI	AGCT	3 cut(s)	144, 478, 486
Alw21I	GWGCWC	3 cut(s)	169, 488, 696
Alw26I	GTCTC	1 cut(s)	206
Alw44I	GTGCAC	1 cut(s)	692
AlwI	GGATC	3 cut(s)	105, 564, 766
Ama87I	CYCGRG	2 cut(s)	209, 290
AoxI	GGCC	2 cut(s)	393, 928
ApaLI	GTGCAC	1 cut(s)	692
ApeKI	GCWGC	2 cut(s)	73, 237
ApoI	RAATTY	2 cut(s)	533, 917
ArsI	GACNNNNNNTTYG	2 cut(s)	582, 614
AsiGI	ACCGGT	1 cut(s)	242
AspLEI	GCGC	1 cut(s)	953
AspS9I	GGNCC	1 cut(s)	590
AsuHPI	GGTGA	3 cut(s)	254, 376, 662
AvaI	CYCGRG	2 cut(s)	209, 290
AvaII	GGWCC	1 cut(s)	590
BaeGI	GKGCMC	2 cut(s)	696, 718
BaeI	ACNNNNGTAYC	4 cut(s)	748, 781, 867, 900
BalI	TGGCCA	1 cut(s)	395
BanII	GRGCYC	2 cut(s)	316, 488
BbsI	GAAGAC	1 cut(s)	241
Bbv12I	GWGCWC	3 cut(s)	169, 488, 696
BbvI	GCAGC	2 cut(s)	60, 224
BccI	CCATC	2 cut(s)	236, 941
BciT130I	CCWGG	3 cut(s)	162, 317, 530
BcoDI	GTCTC	1 cut(s)	206
BfaI	CTAG	1 cut(s)	329
BfmI	CTRYAG	1 cut(s)	579
BfoI	RGCGCY	1 cut(s)	954
BglII	AGATCT	1 cut(s)	196
BisI	GCNGC	3 cut(s)	74, 238, 928
BlsI	GCNGC	3 cut(s)	75, 239, 929
Bme1390I	CCNGG	3 cut(s)	162, 317, 530
Bme18I	GGWCC	1 cut(s)	590
BmeT110I	CYCGRG	2 cut(s)	209, 290
BmgT120I	GGNCC	1 cut(s)	590
BmiI	GGNNCC	2 cut(s)	592, 639
BmrFI	CCNGG	3 cut(s)	162, 317, 530
BpiI	GAAGAC	1 cut(s)	241
BsaHI	GRCGYC	1 cut(s)	225
BsaI	GGTCTC	1 cut(s)	206
BsaJI	CCNNGG	6 cut(s)	232, 267, 291, 315, 528, 931
BsaWI	WCCGGW	1 cut(s)	242
Bsc4I	CCNNNNNNNGG	2 cut(s)	125, 647
Bse118I	RCCGGY	1 cut(s)	242
Bse1I	ACTGG	3 cut(s)	37, 387, 913
Bse3DI	GCAATG	1 cut(s)	668
BseBI	CCWGG	3 cut(s)	162, 317, 530
BseDI	CCNNGG	6 cut(s)	232, 267, 291, 315, 528, 931
BseGI	GGATG	2 cut(s)	228, 383
BseLI	CCNNNNNNNGG	2 cut(s)	125, 647
BseMI	GCAATG	1 cut(s)	668
BseMII	CTCAG	1 cut(s)	59
BseNI	ACTGG	3 cut(s)	37, 387, 913
BseSI	GKGCMC	2 cut(s)	696, 718
BseXI	GCAGC	2 cut(s)	60, 224
BsgI	GTGCAG	1 cut(s)	223
BshFI	GGCC	2 cut(s)	395, 930
BshTI	ACCGGT	1 cut(s)	242
BsiHKAI	GWGCWC	3 cut(s)	169, 488, 696
BsiHKCI	CYCGRG	2 cut(s)	209, 290
BsiSI	CCGG	1 cut(s)	243
BslI	CCNNNNNNNGG	2 cut(s)	125, 647
BsmAI	GTCTC	1 cut(s)	206
BsnI	GGCC	2 cut(s)	395, 930
Bso31I	GGTCTC	1 cut(s)	206
BsoBI	CYCGRG	2 cut(s)	209, 290
Bsp1286I	GDGCHC	5 cut(s)	169, 316, 488, 696, 718
Bsp1407I	TGTACA	2 cut(s)	405, 624
Bsp143I	GATC	5 cut(s)	110, 196, 556, 771, 844
Bsp19I	CCATGG	1 cut(s)	267
BspACI	CCGC	2 cut(s)	810, 927
BspANI	GGCC	2 cut(s)	395, 930
BspCNI	CTCAG	1 cut(s)	60
BspHI	TCATGA	1 cut(s)	787
BspLI	GGNNCC	2 cut(s)	592, 639
BspPI	GGATC	3 cut(s)	105, 564, 766
BspQI	GCTCTTC	1 cut(s)	493
BspTNI	GGTCTC	1 cut(s)	206
BsrDI	GCAATG	1 cut(s)	668
BsrFI	RCCGGY	1 cut(s)	242
BsrGI	TGTACA	2 cut(s)	405, 624
BsrI	ACTGG	3 cut(s)	37, 387, 913
BssAI	RCCGGY	1 cut(s)	242
BssECI	CCNNGG	6 cut(s)	232, 267, 291, 315, 528, 931
BssMI	GATC	5 cut(s)	110, 196, 556, 771, 844
BssNI	GRCGYC	1 cut(s)	225
BssT1I	CCWWGG	3 cut(s)	232, 267, 931
Bst2UI	CCWGG	3 cut(s)	162, 317, 530
Bst4CI	ACNGT	5 cut(s)	22, 301, 364, 568, 900
Bst6I	CTCTTC	1 cut(s)	493
BstACI	GRCGYC	1 cut(s)	225
BstAUI	TGTACA	2 cut(s)	405, 624
BstC8I	GCNNGC	2 cut(s)	346, 416
BstDEI	CTNAG	2 cut(s)	68, 350
BstDSI	CCRYGG	1 cut(s)	267
BstEII	GGTNACC	1 cut(s)	650
BstENI	CCTNNNNNAGG	1 cut(s)	123
BstF5I	GGATG	2 cut(s)	228, 383
BstH2I	RGCGCY	1 cut(s)	954
BstHHI	GCGC	1 cut(s)	953
BstKTI	GATC	5 cut(s)	113, 199, 559, 774, 847
BstMAI	GTCTC	1 cut(s)	206
BstMBI	GATC	5 cut(s)	110, 196, 556, 771, 844
BstMWI	GCNNNNNNNGC	2 cut(s)	79, 354
BstNI	CCWGG	3 cut(s)	162, 317, 530
BstNSI	RCATGY	2 cut(s)	348, 740
BstPI	GGTNACC	1 cut(s)	650
BstSCI	CCNGG	3 cut(s)	160, 315, 528
BstSFI	CTRYAG	1 cut(s)	579
BstSLI	GKGCMC	2 cut(s)	696, 718
BstV1I	GCAGC	2 cut(s)	60, 224
BstV2I	GAAGAC	1 cut(s)	241
BstX2I	RGATCY	3 cut(s)	110, 196, 556
BstXI	CCANNNNNNTGG	1 cut(s)	511
BstYI	RGATCY	3 cut(s)	110, 196, 556
BsuRI	GGCC	2 cut(s)	395, 930
BtgI	CCRYGG	1 cut(s)	267
BtsCI	GGATG	2 cut(s)	228, 383
BtsIMutI	CAGTG	1 cut(s)	564
Cac8I	GCNNGC	2 cut(s)	346, 416
CciI	TCATGA	1 cut(s)	787
CfoI	GCGC	1 cut(s)	953
Cfr10I	RCCGGY	1 cut(s)	242
Cfr13I	GGNCC	1 cut(s)	590
CseI	GACGC	2 cut(s)	233, 407
Csp6I	GTAC	3 cut(s)	406, 625, 757
CspAI	ACCGGT	1 cut(s)	242
CviQI	GTAC	3 cut(s)	406, 625, 757
DdeI	CTNAG	2 cut(s)	68, 350
DpnI	GATC	5 cut(s)	112, 198, 558, 773, 846
DpnII	GATC	5 cut(s)	110, 196, 556, 771, 844
DraI	TTTAAA	1 cut(s)	922
EaeI	YGGCCR	1 cut(s)	393
Eam1104I	CTCTTC	1 cut(s)	493
EarI	CTCTTC	1 cut(s)	493
Ecl136II	GAGCTC	1 cut(s)	486
Eco130I	CCWWGG	3 cut(s)	232, 267, 931
Eco24I	GRGCYC	2 cut(s)	316, 488
Eco31I	GGTCTC	1 cut(s)	206
Eco32I	GATATC	1 cut(s)	139
Eco47I	GGWCC	1 cut(s)	590
Eco53kI	GAGCTC	1 cut(s)	486
Eco57I	CTGAAG	1 cut(s)	62
Eco88I	CYCGRG	2 cut(s)	209, 290
Eco91I	GGTNACC	1 cut(s)	650
EcoICRI	GAGCTC	1 cut(s)	486
EcoNI	CCTNNNNNAGG	1 cut(s)	123
EcoO65I	GGTNACC	1 cut(s)	650
EcoRII	CCWGG	3 cut(s)	160, 315, 528
EcoRV	GATATC	1 cut(s)	139
EcoT14I	CCWWGG	3 cut(s)	232, 267, 931
EcoT38I	GRGCYC	2 cut(s)	316, 488
ErhI	CCWWGG	3 cut(s)	232, 267, 931
Fnu4HI	GCNGC	3 cut(s)	74, 238, 928
FokI	GGATG	2 cut(s)	215, 370
FriOI	GRGCYC	2 cut(s)	316, 488
Fsp4HI	GCNGC	3 cut(s)	74, 238, 928
FspBI	CTAG	1 cut(s)	329
GlaI	GCGC	1 cut(s)	952
GluI	GCNGC	3 cut(s)	74, 238, 928
HaeII	RGCGCY	1 cut(s)	954
HaeIII	GGCC	2 cut(s)	395, 930
HapII	CCGG	1 cut(s)	243
HgaI	GACGC	2 cut(s)	233, 407
HhaI	GCGC	1 cut(s)	953
Hin1I	GRCGYC	1 cut(s)	225
Hin6I	GCGC	1 cut(s)	951
HinP1I	GCGC	1 cut(s)	951
HindIII	AAGCTT	1 cut(s)	476
HinfI	GANTC	3 cut(s)	64, 508, 784
HpaII	CCGG	1 cut(s)	243
HphI	GGTGA	3 cut(s)	254, 376, 662
Hpy166II	GTNNAC	3 cut(s)	379, 625, 694
Hpy188I	TCNGA	2 cut(s)	14, 69
Hpy188III	TCNNGA	3 cut(s)	422, 731, 788
Hpy8I	GTNNAC	3 cut(s)	379, 625, 694
Hpy99I	CGWCG	2 cut(s)	227, 772
HpyAV	CCTTC	8 cut(s)	167, 226, 272, 314, 334, 604, 737, 967
HpyCH4III	ACNGT	5 cut(s)	22, 301, 364, 568, 900
HpyCH4IV	ACGT	1 cut(s)	273
HpyCH4V	TGCA	8 cut(s)	194, 240, 357, 465, 539, 694, 746, 966
HpyF10VI	GCNNNNNNNGC	2 cut(s)	79, 354
HpyF3I	CTNAG	2 cut(s)	68, 350
HpySE526I	ACGT	1 cut(s)	273
Hsp92I	GRCGYC	1 cut(s)	225
HspAI	GCGC	1 cut(s)	951
Kzo9I	GATC	5 cut(s)	110, 196, 556, 771, 844
LguI	GCTCTTC	1 cut(s)	493
LmnI	GCTCC	2 cut(s)	164, 643
Lsp1109I	GCAGC	2 cut(s)	60, 224
MaeI	CTAG	1 cut(s)	329
MaeII	ACGT	1 cut(s)	273
MaeIII	GTNAC	7 cut(s)	28, 86, 301, 470, 562, 650, 866
MalI	GATC	5 cut(s)	112, 198, 558, 773, 846
MboI	GATC	5 cut(s)	110, 196, 556, 771, 844
MboII	GAAGA	6 cut(s)	17, 178, 241, 437, 480, 715
MflI	RGATCY	3 cut(s)	110, 196, 556
MhlI	GDGCHC	5 cut(s)	169, 316, 488, 696, 718
MlsI	TGGCCA	1 cut(s)	395
MluCI	AATT	2 cut(s)	533, 917
MluNI	TGGCCA	1 cut(s)	395
MlyI	GAGTC	1 cut(s)	502
MmeI	TCCRAC	2 cut(s)	138, 568
MnlI	CCTC	9 cut(s)	8, 63, 64, 286, 360, 445, 513, 537, 747
Mox20I	TGGCCA	1 cut(s)	395
MscI	TGGCCA	1 cut(s)	395
MseI	TTAA	3 cut(s)	851, 861, 921
MslI	CAYNNNNRTG	4 cut(s)	632, 686, 699, 741
Msp20I	TGGCCA	1 cut(s)	395
MspI	CCGG	1 cut(s)	243
MspR9I	CCNGG	3 cut(s)	162, 317, 530
MvaI	CCWGG	3 cut(s)	162, 317, 530
MwoI	GCNNNNNNNGC	2 cut(s)	79, 354
NcoI	CCATGG	1 cut(s)	267
NdeII	GATC	5 cut(s)	110, 196, 556, 771, 844
NlaIV	GGNNCC	2 cut(s)	592, 639
NmuCI	GTSAC	2 cut(s)	562, 650
NspI	RCATGY	2 cut(s)	348, 740
PaeI	GCATGC	1 cut(s)	348
PagI	TCATGA	1 cut(s)	787
PciSI	GCTCTTC	1 cut(s)	493
PfeI	GAWTC	2 cut(s)	64, 784
PfoI	TCCNGGA	1 cut(s)	160
PinAI	ACCGGT	1 cut(s)	242
PkrI	GCNGC	3 cut(s)	75, 239, 929
PleI	GAGTC	1 cut(s)	502
PpsI	GAGTC	1 cut(s)	502
Psp124BI	GAGCTC	1 cut(s)	488
Psp6I	CCWGG	3 cut(s)	160, 315, 528
PspEI	GGTNACC	1 cut(s)	650
PspGI	CCWGG	3 cut(s)	160, 315, 528
PspN4I	GGNNCC	2 cut(s)	592, 639
PspPI	GGNCC	1 cut(s)	590
PsuI	RGATCY	3 cut(s)	110, 196, 556
RsaI	GTAC	3 cut(s)	407, 626, 758
RsaNI	GTAC	3 cut(s)	406, 625, 757
RseI	CAYNNNNRTG	4 cut(s)	632, 686, 699, 741
SacI	GAGCTC	1 cut(s)	488
SapI	GCTCTTC	1 cut(s)	493
SaqAI	TTAA	3 cut(s)	851, 861, 921
SatI	GCNGC	3 cut(s)	74, 238, 928
Sau3AI	GATC	5 cut(s)	110, 196, 556, 771, 844
Sau96I	GGNCC	1 cut(s)	590
SchI	GAGTC	1 cut(s)	502
ScrFI	CCNGG	3 cut(s)	162, 317, 530
SduI	GDGCHC	5 cut(s)	169, 316, 488, 696, 718
SfcI	CTRYAG	1 cut(s)	579
SgrAI	CRCCGGYG	1 cut(s)	242
SinI	GGWCC	1 cut(s)	590
SmiI	ATTTAAAT	1 cut(s)	922
SmiMI	CAYNNNNRTG	4 cut(s)	632, 686, 699, 741
SphI	GCATGC	1 cut(s)	348
Sse9I	AATT	2 cut(s)	533, 917
SsiI	CCGC	2 cut(s)	810, 927
SspI	AATATT	1 cut(s)	402
SspMI	CTAG	1 cut(s)	329
SstI	GAGCTC	1 cut(s)	488
StyD4I	CCNGG	3 cut(s)	160, 315, 528
StyI	CCWWGG	3 cut(s)	232, 267, 931
SwaI	ATTTAAAT	1 cut(s)	922
TaaI	ACNGT	5 cut(s)	22, 301, 364, 568, 900
TaiI	ACGT	1 cut(s)	276
TaqI	TCGA	2 cut(s)	97, 770
TasI	AATT	2 cut(s)	533, 917
TatI	WGTACW	2 cut(s)	405, 624
TauI	GCSGC	1 cut(s)	930
TfiI	GAWTC	2 cut(s)	64, 784
Tru1I	TTAA	3 cut(s)	851, 861, 921
Tru9I	TTAA	3 cut(s)	851, 861, 921
TscAI	CASTG	1 cut(s)	571
TseFI	GTSAC	2 cut(s)	562, 650
TseI	GCWGC	2 cut(s)	73, 237
Tsp45I	GTSAC	2 cut(s)	562, 650
TspDTI	ATGAA	3 cut(s)	450, 776, 818
TspGWI	ACGGA	1 cut(s)	610
TspRI	CASTG	1 cut(s)	571
VneI	GTGCAC	1 cut(s)	692
VpaK11BI	GGWCC	1 cut(s)	590
XagI	CCTNNNNNAGG	1 cut(s)	123
XapI	RAATTY	2 cut(s)	533, 917
XceI	RCATGY	2 cut(s)	348, 740
XcmI	CCANNNNNNNNNTGG	2 cut(s)	313, 511
XspI	CTAG	1 cut(s)	329

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.