Homeodomain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PfkB | PF00294 | 5 - 309 | 2.3e-76 | pfkB family carbohydrate kinase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 124 |
| Acc16I | TGCGCA | 1 cut(s) | 258 |
| Acc36I | ACCTGC | 1 cut(s) | 124 |
| AccI | GTMKAC | 1 cut(s) | 481 |
| AciI | CCGC | 6 cut(s) | 5, 60, 158, 270, 465, 776 |
| AclWI | GGATC | 4 cut(s) | 402, 415, 491, 617 |
| AcsI | RAATTY | 1 cut(s) | 722 |
| AcuI | CTGAAG | 1 cut(s) | 236 |
| AfaI | GTAC | 1 cut(s) | 895 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 507 |
| AflIII | ACRYGT | 1 cut(s) | 342 |
| AgsI | TTSAA | 2 cut(s) | 727, 853 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 302, 334 |
| AluBI | AGCT | 3 cut(s) | 145, 364, 887 |
| AluI | AGCT | 3 cut(s) | 145, 364, 887 |
| Alw21I | GWGCWC | 1 cut(s) | 115 |
| Alw44I | GTGCAC | 1 cut(s) | 111 |
| AlwI | GGATC | 4 cut(s) | 402, 415, 491, 617 |
| AoxI | GGCC | 2 cut(s) | 387, 521 |
| ApaLI | GTGCAC | 1 cut(s) | 111 |
| ApeKI | GCWGC | 2 cut(s) | 452, 536 |
| ApoI | RAATTY | 1 cut(s) | 722 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 642 |
| AspLEI | GCGC | 1 cut(s) | 259 |
| AsuC2I | CCSGG | 1 cut(s) | 105 |
| AsuHPI | GGTGA | 4 cut(s) | 314, 598, 704, 791 |
| BaeGI | GKGCMC | 1 cut(s) | 115 |
| BamHI | GGATCC | 1 cut(s) | 407 |
| Bbv12I | GWGCWC | 1 cut(s) | 115 |
| BbvI | GCAGC | 2 cut(s) | 464, 523 |
| BccI | CCATC | 3 cut(s) | 539, 683, 836 |
| BceAI | ACGGC | 1 cut(s) | 914 |
| BciVI | GTATCC | 1 cut(s) | 943 |
| BcnI | CCSGG | 1 cut(s) | 105 |
| BfaI | CTAG | 2 cut(s) | 333, 540 |
| BfmI | CTRYAG | 1 cut(s) | 322 |
| BfuAI | ACCTGC | 1 cut(s) | 124 |
| BfuI | GTATCC | 1 cut(s) | 943 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 125, 520 |
| BisI | GCNGC | 4 cut(s) | 159, 453, 465, 537 |
| BlsI | GCNGC | 4 cut(s) | 160, 454, 466, 538 |
| Bme1390I | CCNGG | 1 cut(s) | 105 |
| BmiI | GGNNCC | 2 cut(s) | 329, 409 |
| BmrFI | CCNGG | 1 cut(s) | 105 |
| BmsI | GCATC | 7 cut(s) | 244, 463, 523, 558, 567, 772, 928 |
| BpuEI | CTTGAG | 3 cut(s) | 310, 335, 600 |
| BpuMI | CCSGG | 1 cut(s) | 105 |
| BsaBI | GATNNNNATC | 1 cut(s) | 38 |
| BsaJI | CCNNGG | 3 cut(s) | 103, 468, 810 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 234, 264, 302, 332, 848, 878 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 507 |
| Bse118I | RCCGGY | 3 cut(s) | 62, 86, 476 |
| Bse1I | ACTGG | 3 cut(s) | 279, 745, 775 |
| Bse8I | GATNNNNATC | 1 cut(s) | 38 |
| BseDI | CCNNGG | 3 cut(s) | 103, 468, 810 |
| BseGI | GGATG | 3 cut(s) | 259, 478, 844 |
| BseJI | GATNNNNATC | 1 cut(s) | 38 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 507 |
| BseMII | CTCAG | 3 cut(s) | 228, 417, 914 |
| BseNI | ACTGG | 3 cut(s) | 279, 745, 775 |
| BseSI | GKGCMC | 1 cut(s) | 115 |
| BseXI | GCAGC | 2 cut(s) | 464, 523 |
| BshFI | GGCC | 2 cut(s) | 389, 523 |
| BsiHKAI | GWGCWC | 1 cut(s) | 115 |
| BsiSI | CCGG | 4 cut(s) | 63, 87, 105, 477 |
| BslFI | GGGAC | 1 cut(s) | 35 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 507 |
| BsmFI | GGGAC | 1 cut(s) | 35 |
| BsmI | GAATGC | 1 cut(s) | 161 |
| BsnI | GGCC | 2 cut(s) | 389, 523 |
| Bsp1286I | GDGCHC | 1 cut(s) | 115 |
| Bsp143I | GATC | 4 cut(s) | 39, 407, 496, 622 |
| Bsp19I | CCATGG | 1 cut(s) | 810 |
| BspACI | CCGC | 6 cut(s) | 5, 60, 158, 270, 465, 776 |
| BspANI | GGCC | 2 cut(s) | 389, 523 |
| BspCNI | CTCAG | 3 cut(s) | 229, 418, 913 |
| BspLI | GGNNCC | 2 cut(s) | 329, 409 |
| BspMI | ACCTGC | 1 cut(s) | 124 |
| BspPI | GGATC | 4 cut(s) | 402, 415, 491, 617 |
| BsrFI | RCCGGY | 3 cut(s) | 62, 86, 476 |
| BsrI | ACTGG | 3 cut(s) | 279, 745, 775 |
| BssAI | RCCGGY | 3 cut(s) | 62, 86, 476 |
| BssECI | CCNNGG | 3 cut(s) | 103, 468, 810 |
| BssMI | GATC | 4 cut(s) | 39, 407, 496, 622 |
| BssNAI | GTATAC | 1 cut(s) | 482 |
| BssT1I | CCWWGG | 2 cut(s) | 468, 810 |
| Bst1107I | GTATAC | 1 cut(s) | 482 |
| Bst4CI | ACNGT | 2 cut(s) | 302, 760 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 917 |
| BstC8I | GCNNGC | 2 cut(s) | 261, 387 |
| BstDEI | CTNAG | 4 cut(s) | 237, 426, 717, 900 |
| BstDSI | CCRYGG | 1 cut(s) | 810 |
| BstF5I | GGATG | 3 cut(s) | 259, 478, 844 |
| BstHHI | GCGC | 1 cut(s) | 259 |
| BstKTI | GATC | 4 cut(s) | 42, 410, 499, 625 |
| BstMBI | GATC | 4 cut(s) | 39, 407, 496, 622 |
| BstNSI | RCATGY | 3 cut(s) | 202, 263, 346 |
| BstSCI | CCNGG | 1 cut(s) | 103 |
| BstSFI | CTRYAG | 1 cut(s) | 322 |
| BstSLI | GKGCMC | 1 cut(s) | 115 |
| BstV1I | GCAGC | 2 cut(s) | 464, 523 |
| BstX2I | RGATCY | 2 cut(s) | 407, 622 |
| BstYI | RGATCY | 2 cut(s) | 407, 622 |
| BstZ17I | GTATAC | 1 cut(s) | 482 |
| BsuI | GTATCC | 1 cut(s) | 943 |
| BsuRI | GGCC | 2 cut(s) | 389, 523 |
| BtgI | CCRYGG | 1 cut(s) | 810 |
| BtgZI | GCGATG | 1 cut(s) | 606 |
| BtsCI | GGATG | 3 cut(s) | 259, 478, 844 |
| BtsIMutI | CAGTG | 4 cut(s) | 11, 234, 272, 684 |
| BveI | ACCTGC | 1 cut(s) | 124 |
| Cac8I | GCNNGC | 2 cut(s) | 261, 387 |
| CfoI | GCGC | 1 cut(s) | 259 |
| Cfr10I | RCCGGY | 3 cut(s) | 62, 86, 476 |
| Csp6I | GTAC | 1 cut(s) | 894 |
| CviAII | CATG | 8 cut(s) | 199, 260, 316, 343, 370, 432, 457, 811 |
| CviQI | GTAC | 1 cut(s) | 894 |
| DdeI | CTNAG | 4 cut(s) | 237, 426, 717, 900 |
| DpnI | GATC | 4 cut(s) | 41, 409, 498, 624 |
| DpnII | GATC | 4 cut(s) | 39, 407, 496, 622 |
| EciI | GGCGGA | 1 cut(s) | 20 |
| Eco130I | CCWWGG | 2 cut(s) | 468, 810 |
| Eco57I | CTGAAG | 1 cut(s) | 236 |
| EcoT14I | CCWWGG | 2 cut(s) | 468, 810 |
| ErhI | CCWWGG | 2 cut(s) | 468, 810 |
| FaeI | CATG | 8 cut(s) | 202, 263, 319, 346, 373, 435, 460, 814 |
| FaqI | GGGAC | 1 cut(s) | 35 |
| FatI | CATG | 8 cut(s) | 198, 259, 315, 342, 369, 431, 456, 810 |
| FauI | CCCGC | 1 cut(s) | 769 |
| FauNDI | CATATG | 1 cut(s) | 447 |
| FblI | GTMKAC | 1 cut(s) | 481 |
| Fnu4HI | GCNGC | 4 cut(s) | 159, 453, 465, 537 |
| FokI | GGATG | 3 cut(s) | 266, 485, 851 |
| Fsp4HI | GCNGC | 4 cut(s) | 159, 453, 465, 537 |
| FspAI | RTGCGCAY | 1 cut(s) | 258 |
| FspBI | CTAG | 2 cut(s) | 333, 540 |
| FspI | TGCGCA | 1 cut(s) | 258 |
| GlaI | GCGC | 1 cut(s) | 258 |
| GluI | GCNGC | 4 cut(s) | 159, 453, 465, 537 |
| HaeIII | GGCC | 2 cut(s) | 389, 523 |
| HapII | CCGG | 4 cut(s) | 63, 87, 105, 477 |
| HhaI | GCGC | 1 cut(s) | 259 |
| Hin1II | CATG | 8 cut(s) | 202, 263, 319, 346, 373, 435, 460, 814 |
| Hin6I | GCGC | 1 cut(s) | 257 |
| HinP1I | GCGC | 1 cut(s) | 257 |
| HincII | GTYRAC | 1 cut(s) | 763 |
| HindII | GTYRAC | 1 cut(s) | 763 |
| HindIII | AAGCTT | 1 cut(s) | 143 |
| HinfI | GANTC | 4 cut(s) | 8, 80, 356, 565 |
| HpaII | CCGG | 4 cut(s) | 63, 87, 105, 477 |
| HphI | GGTGA | 4 cut(s) | 314, 598, 704, 791 |
| Hpy166II | GTNNAC | 5 cut(s) | 84, 113, 232, 482, 763 |
| Hpy188I | TCNGA | 6 cut(s) | 170, 361, 378, 427, 903, 937 |
| Hpy188III | TCNNGA | 4 cut(s) | 553, 562, 626, 944 |
| Hpy8I | GTNNAC | 5 cut(s) | 84, 113, 232, 482, 763 |
| Hpy99I | CGWCG | 1 cut(s) | 170 |
| HpyAV | CCTTC | 5 cut(s) | 534, 691, 847, 898, 932 |
| HpyCH4III | ACNGT | 2 cut(s) | 302, 760 |
| HpyCH4IV | ACGT | 1 cut(s) | 504 |
| HpyCH4V | TGCA | 6 cut(s) | 113, 435, 604, 705, 872, 911 |
| HpyF3I | CTNAG | 4 cut(s) | 237, 426, 717, 900 |
| HpySE526I | ACGT | 1 cut(s) | 504 |
| Hsp92II | CATG | 8 cut(s) | 202, 263, 319, 346, 373, 435, 460, 814 |
| HspAI | GCGC | 1 cut(s) | 257 |
| Kzo9I | GATC | 4 cut(s) | 39, 407, 496, 622 |
| LmnI | GCTCC | 1 cut(s) | 884 |
| Lsp1109I | GCAGC | 2 cut(s) | 464, 523 |
| LweI | GCATC | 7 cut(s) | 244, 463, 523, 558, 567, 772, 928 |
| MaeI | CTAG | 2 cut(s) | 333, 540 |
| MaeII | ACGT | 1 cut(s) | 504 |
| MaeIII | GTNAC | 3 cut(s) | 283, 682, 736 |
| MalI | GATC | 4 cut(s) | 41, 409, 498, 624 |
| MboI | GATC | 4 cut(s) | 39, 407, 496, 622 |
| MboII | GAAGA | 4 cut(s) | 229, 232, 647, 794 |
| MflI | RGATCY | 2 cut(s) | 407, 622 |
| MhlI | GDGCHC | 1 cut(s) | 115 |
| MluCI | AATT | 4 cut(s) | 605, 722, 848, 912 |
| MlyI | GAGTC | 1 cut(s) | 89 |
| MmeI | TCCRAC | 1 cut(s) | 148 |
| MnlI | CCTC | 7 cut(s) | 232, 300, 527, 592, 662, 829, 850 |
| MroXI | GAANNNNTTC | 1 cut(s) | 642 |
| MseI | TTAA | 4 cut(s) | 381, 582, 753, 954 |
| MslI | CAYNNNNRTG | 1 cut(s) | 584 |
| MspI | CCGG | 4 cut(s) | 63, 87, 105, 477 |
| MspR9I | CCNGG | 1 cut(s) | 105 |
| Mva1269I | GAATGC | 1 cut(s) | 161 |
| NciI | CCSGG | 1 cut(s) | 105 |
| NcoI | CCATGG | 1 cut(s) | 810 |
| NdeI | CATATG | 1 cut(s) | 447 |
| NdeII | GATC | 4 cut(s) | 39, 407, 496, 622 |
| NlaIII | CATG | 8 cut(s) | 202, 263, 319, 346, 373, 435, 460, 814 |
| NlaIV | GGNNCC | 2 cut(s) | 329, 409 |
| NmuCI | GTSAC | 3 cut(s) | 283, 682, 736 |
| NsbI | TGCGCA | 1 cut(s) | 258 |
| NspI | RCATGY | 3 cut(s) | 202, 263, 346 |
| PaeI | GCATGC | 1 cut(s) | 263 |
| PaqCI | CACCTGC | 1 cut(s) | 124 |
| PciI | ACATGT | 1 cut(s) | 342 |
| PctI | GAATGC | 1 cut(s) | 161 |
| PdmI | GAANNNNTTC | 1 cut(s) | 642 |
| PfeI | GAWTC | 3 cut(s) | 8, 356, 565 |
| PflFI | GACNNNGTC | 1 cut(s) | 47 |
| PkrI | GCNGC | 4 cut(s) | 160, 454, 466, 538 |
| PleI | GAGTC | 1 cut(s) | 88 |
| PpsI | GAGTC | 1 cut(s) | 88 |
| PscI | ACATGT | 1 cut(s) | 342 |
| PspN4I | GGNNCC | 2 cut(s) | 329, 409 |
| PsuI | RGATCY | 2 cut(s) | 407, 622 |
| PsyI | GACNNNGTC | 1 cut(s) | 47 |
| RsaI | GTAC | 1 cut(s) | 895 |
| RsaNI | GTAC | 1 cut(s) | 894 |
| RseI | CAYNNNNRTG | 1 cut(s) | 584 |
| SaqAI | TTAA | 4 cut(s) | 381, 582, 753, 954 |
| SatI | GCNGC | 4 cut(s) | 159, 453, 465, 537 |
| Sau3AI | GATC | 4 cut(s) | 39, 407, 496, 622 |
| SchI | GAGTC | 1 cut(s) | 89 |
| ScrFI | CCNGG | 1 cut(s) | 105 |
| SduI | GDGCHC | 1 cut(s) | 115 |
| SfaNI | GCATC | 7 cut(s) | 244, 463, 523, 558, 567, 772, 928 |
| SfcI | CTRYAG | 1 cut(s) | 322 |
| SgrAI | CRCCGGYG | 1 cut(s) | 62 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 584 |
| SmlI | CTYRAG | 3 cut(s) | 289, 350, 615 |
| SmoI | CTYRAG | 3 cut(s) | 289, 350, 615 |
| SphI | GCATGC | 1 cut(s) | 263 |
| Sse9I | AATT | 4 cut(s) | 605, 722, 848, 912 |
| SsiI | CCGC | 6 cut(s) | 5, 60, 158, 270, 465, 776 |
| SspMI | CTAG | 2 cut(s) | 333, 540 |
| StyD4I | CCNGG | 1 cut(s) | 103 |
| StyI | CCWWGG | 2 cut(s) | 468, 810 |
| TaaI | ACNGT | 2 cut(s) | 302, 760 |
| TaiI | ACGT | 1 cut(s) | 507 |
| TaqI | TCGA | 3 cut(s) | 42, 265, 945 |
| TasI | AATT | 4 cut(s) | 605, 722, 848, 912 |
| TatI | WGTACW | 1 cut(s) | 893 |
| TauI | GCSGC | 2 cut(s) | 161, 467 |
| TfiI | GAWTC | 3 cut(s) | 8, 356, 565 |
| Tru1I | TTAA | 4 cut(s) | 381, 582, 753, 954 |
| Tru9I | TTAA | 4 cut(s) | 381, 582, 753, 954 |
| TscAI | CASTG | 4 cut(s) | 18, 241, 279, 691 |
| TseFI | GTSAC | 3 cut(s) | 283, 682, 736 |
| TseI | GCWGC | 2 cut(s) | 452, 536 |
| Tsp45I | GTSAC | 3 cut(s) | 283, 682, 736 |
| TspDTI | ATGAA | 5 cut(s) | 304, 473, 568, 786, 855 |
| TspRI | CASTG | 4 cut(s) | 18, 241, 279, 691 |
| Tth111I | GACNNNGTC | 1 cut(s) | 47 |
| VneI | GTGCAC | 1 cut(s) | 111 |
| XapI | RAATTY | 1 cut(s) | 722 |
| XceI | RCATGY | 3 cut(s) | 202, 263, 346 |
| XmiI | GTMKAC | 1 cut(s) | 481 |
| XmnI | GAANNNNTTC | 1 cut(s) | 642 |
| XspI | CTAG | 2 cut(s) | 333, 540 |