Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0000152

Physical Location & Seq

Genomic Coordinates Forward (+)

38384186 .. 38385287

Gene Structure 1102 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0330800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 966 bp

ATGCTTGAAAAGAGCCATGGGACCAAGGAATCTCTTGATGCTTTGCTTTGTAGAGCAGTGAAGTACTTACCACAGGTTGAATTCTTTTGGCTTATGGCTGCTAAGGAGAACTGGCTTGCTGGGGACGTGAATGCTGCCCGTATGATCCTTGAAGAAGCTTCTAAATCCCTTCCCAATTCTGAAGAAATTATGCTTGCTGCATTTAAGTTAGAGTTTGAAAATCATGAGCAAGAGAGAGCTAGAATGATTCTTGACAAAACTCGAGCAAGGCTAGAGGAACGCCTCAATCATTTTCAAAAAGCCAAGGCTGCGTATGAATCGGGTCTCAAGCACTACTCCAATTGTATATCGCTTTGGCTTTCTCTAGCAAATCTTGAAGAGAAGAGGAATGGTCTGAGTAAAGCTCGTGCAGTTCTCACAACAGCCAGGAAGAAGAACTCTCGTAATCCTGAACTGTGGCTTGCTGCTGTTCGAGCTAAACTAAGGCATGGTAATAAGAGGGAAGCTGATACTTTGATGGCAAAGGCTTTGCAGGAGCAGGAGTGTCCCAATAGTGGTATCTTGTGGGCAGCATCTATTGGGATGGTACTTGGTCCTCAAAGGAAGACCAAAAGTCTAGATGCCTACAAATATTGTGGTAAGGAAGATCCCCATGTTAATGCTGCTGTGGCCAAGTTATTTTGGCATGAAAGAAAGATAGATAGAGCTAGGACTAAGCTCAACCTGGCAGTTACACATGCCCCAGATATTGGAGATTTCTGGACTTTATACTACAAGTTTGAACTTCAGAATGGAACTGAGGAGACCCGGAAGGACGTACTGGAATGGTGTGTTGCTGCACAACCAAAGCATGGTGAAAAATGGCAAACTATTTCAAAGGCCGTGGAGAACTGGCACCAACCAACTGAAACTATCTTGAAGAAAGCTGTGAAGGAAGATGCAGCCACAGCTCAAAATCAACAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001763 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0009933 GO:0009987 GO:0010014 GO:0010016 GO:0010223 GO:0010346 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019827 GO:0022412 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048507 GO:0048532 GO:0048608 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0080166 GO:0090506 GO:0090567 GO:0098727 GO:0099402 GO:0140110 GO:1903506 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox

Protein Analysis

321

Amino Acids

36.74

Weight (kDa)

9.17

Isoelectric Point (pI)

36.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Suf	PF05843	17 - 168	4.1e-06	Suppressor of forked protein (Suf)
HAT_PRP39_N	PF23240	93 - 167	4.6e-06	PRP39 N-terminal HAT repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000152)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17950
fragaria_vesca	FvH4_1g11910 FvH4_3g04400
malus_domestica	MD02G1133000.v1.1 MD15G1245600.v1.1
prunus_persica	Prupe.7G167700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0314921 RchiOBHm_Chr1g0319941 RchiOBHm_Chr1g0321251 RchiOBHm_Chr1g0323021 RchiOBHm_Chr1g0324491 RchiOBHm_Chr1g0325171 RchiOBHm_Chr1g0360601 RchiOBHm_Chr1g0365451 RchiOBHm_Chr1g0381201 RchiOBHm_Chr2g0085401 RchiOBHm_Chr2g0099501 RchiOBHm_Chr2g0106981 RchiOBHm_Chr2g0130271 RchiOBHm_Chr2g0155121 RchiOBHm_Chr3g0455971 RchiOBHm_Chr3g0459501 RchiOBHm_Chr3g0478111 RchiOBHm_Chr3g0480661 RchiOBHm_Chr4g0388561 RchiOBHm_Chr4g0394421 RchiOBHm_Chr4g0424371 RchiOBHm_Chr5g0028631 RchiOBHm_Chr5g0069751 RchiOBHm_Chr5g0076691 RchiOBHm_Chr5g0076711 RchiOBHm_Chr5g0076721 RchiOBHm_Chr5g0079671 RchiOBHm_Chr5g0079731 RchiOBHm_Chr5g0079911 RchiOBHm_Chr5g0081741 RchiOBHm_Chr6g0255231 RchiOBHm_Chr6g0283251 RchiOBHm_Chr6g0300091 RchiOBHm_Chr7g0190751 RchiOBHm_Chr7g0240241
rosa_multiflora	Rmu_co8441375.1_g000001 Rmu_sc0000110.1_g000027 Rmu_sc0000187.1_g000008 Rmu_sc0000240.1_g000065 Rmu_sc0000251.1_g000004 Rmu_sc0000272.1_g000025 Rmu_sc0000276.1_g000074 Rmu_sc0000284.1_g000010 Rmu_sc0000285.1_g000021 Rmu_sc0000360.1_g000034 Rmu_sc0000365.1_g000038 Rmu_sc0000368.1_g000013 Rmu_sc0000368.1_g000025 Rmu_sc0000770.1_g000044 Rmu_sc0000770.1_g000052 Rmu_sc0000795.1_g000098 Rmu_sc0000945.1_g000037 Rmu_sc0000949.1_g000023 Rmu_sc0000982.1_g000002 Rmu_sc0001424.1_g000004 Rmu_sc0001775.1_g000004 Rmu_sc0001952.1_g000010 Rmu_sc0002080.1_g000046 Rmu_sc0002141.1_g000016 Rmu_sc0002183.1_g000004 Rmu_sc0002187.1_g000040 Rmu_sc0002263.1_g000057 Rmu_sc0002351.1_g000061 Rmu_sc0002542.1_g000017 Rmu_sc0002751.1_g000003 Rmu_sc0002792.1_g000029 Rmu_sc0002798.1_g000020 Rmu_sc0002985.1_g000010 Rmu_sc0003124.1_g000019 Rmu_sc0003207.1_g000019 Rmu_sc0003237.1_g000003 Rmu_sc0003363.1_g000050 Rmu_sc0003443.1_g000025 Rmu_sc0003465.1_g000032 Rmu_sc0003500.1_g000012 Rmu_sc0003809.1_g000026 Rmu_sc0003859.1_g000032 Rmu_sc0004085.1_g000003 Rmu_sc0004085.1_g000008 Rmu_sc0004571.1_g000019 Rmu_sc0004753.1_g000006 Rmu_sc0004865.1_g000017 Rmu_sc0004881.1_g000007 Rmu_sc0005697.1_g000023 Rmu_sc0005812.1_g000020 Rmu_sc0007076.1_g000001 Rmu_sc0007801.1_g000003 Rmu_sc0008355.1_g000007 Rmu_sc0009380.1_g000006 Rmu_sc0010191.1_g000004 Rmu_sc0010252.1_g000006 Rmu_sc0011026.1_g000001 Rmu_sc0011824.1_g000003 Rmu_sc0012533.1_g000006 Rmu_sc0012640.1_g000006 Rmu_sc0014032.1_g000001 Rmu_sc0014545.1_g000001 Rmu_sc0014840.1_g000008 Rmu_sc0015060.1_g000013 Rmu_sc0018122.1_g000003 Rmu_sc0026563.1_g000004 Rmu_ssc0000213.1_g000057 Rmu_ssc0000213.1_g000091 Rmu_ssc0000262.1_g000021 Rmu_ssc0000282.1_g000021 Rmu_ssc0000295.1_g000041 Rmu_ssc0000438.1_g000002 Rmu_ssc0000472.1_g000015
rosa_roxburghii	Rroxscaffold_1G00020080 Rroxscaffold_2G00084980 Rroxscaffold_2G00143020 Rroxscaffold_3G00261750 Rroxscaffold_3G00268610 Rroxscaffold_4G00312950 Rroxscaffold_7G00156650 Rroxscaffold_7G00215160
rosa_rugosa	Rorug01G0077100 Rorug01G0201100 Rorug01G0246900 Rorug01G0256600 Rorug02G0080200 Rorug02G0089300 Rorug02G0090700 Rorug02G0177200 Rorug02G0187000 Rorug02G0192600 Rorug02G0232700 Rorug02G0262100 Rorug02G0328300 Rorug02G0408300 Rorug02G0641200 Rorug03G0155000 Rorug03G0185500 Rorug03G0256500 Rorug03G0291000 Rorug03G0299400 Rorug03G0317000 Rorug03G0326700 Rorug03G0330800 Rorug03G0339700 Rorug03G0352900 Rorug04G0029800 Rorug04G0029900 Rorug04G0048100 Rorug04G0075800 Rorug04G0124400 Rorug04G0212100 Rorug04G0212400 Rorug04G0253200 Rorug05G0116700 Rorug05G0146500 Rorug05G0211900 Rorug05G0215700 Rorug05G0216100 Rorug05G0220500 Rorug05G0339400 Rorug05G0352000 Rorug05G0356500.1 Rorug05G0398900 Rorug05G0474700 Rorug05G0511400 Rorug05G0540200 Rorug05G0541000 Rorug05G0572900.1 Rorug05G0584000 Rorug06G0000900 Rorug06G0014600 Rorug06G0018800 Rorug06G0026100 Rorug06G0042900 Rorug06G0082600 Rorug06G0133900 Rorug06G0229100 Rorug07G0321400 Rorug07G0326400 Rorug07G0326600.1
rosa_wichuraiana	Rw0G017710 Rw1G012170 Rw1G039350 Rw2G010030 Rw3G024430 Rw5G045720 Rw7G025340 Rw7G040870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	894
AccB7I	CCANNNNNTGG	2 cut(s)	749, 851
AclWI	GGATC	2 cut(s)	139, 641
AcoI	YGGCCR	1 cut(s)	669
AcsI	RAATTY	1 cut(s)	80
AcuI	CTGAAG	2 cut(s)	201, 770
AfaI	GTAC	3 cut(s)	65, 588, 819
AfiI	CCNNNNNNNGG	3 cut(s)	554, 749, 851
AgsI	TTSAA	9 cut(s)	8, 80, 152, 218, 296, 377, 782, 876, 919
AhdI	GACNNNNNGTC	1 cut(s)	612
AjiI	CACGTC	1 cut(s)	127
AjnI	CCWGG	2 cut(s)	425, 723
AluBI	AGCT	9 cut(s)	158, 239, 404, 476, 506, 707, 718, 926, 950
AluI	AGCT	9 cut(s)	158, 239, 404, 476, 506, 707, 718, 926, 950
Alw26I	GTCTC	2 cut(s)	329, 797
AlwI	GGATC	2 cut(s)	139, 641
Ama87I	CYCGRG	1 cut(s)	261
AoxI	GGCC	2 cut(s)	669, 879
ApeKI	GCWGC	9 cut(s)	98, 134, 197, 308, 464, 569, 662, 836, 941
ApoI	RAATTY	1 cut(s)	80
AspS9I	GGNCC	2 cut(s)	21, 593
AsuC2I	CCSGG	1 cut(s)	808
AsuHPI	GGTGA	1 cut(s)	866
AvaI	CYCGRG	1 cut(s)	261
AvaII	GGWCC	2 cut(s)	21, 593
BalI	TGGCCA	1 cut(s)	671
BanI	GGYRCC	1 cut(s)	894
BauI	CACGAG	1 cut(s)	405
BbsI	GAAGAC	1 cut(s)	611
BbvI	GCAGC	9 cut(s)	85, 121, 184, 295, 451, 581, 649, 823, 953
BccI	CCATC	2 cut(s)	511, 577
BceAI	ACGGC	1 cut(s)	866
BciT130I	CCWGG	2 cut(s)	427, 725
BcnI	CCSGG	1 cut(s)	808
BcoDI	GTCTC	2 cut(s)	329, 797
BfaI	CTAG	5 cut(s)	240, 272, 365, 617, 708
BisI	GCNGC	9 cut(s)	99, 135, 198, 309, 465, 570, 663, 837, 942
BlsI	GCNGC	9 cut(s)	100, 136, 199, 310, 466, 571, 664, 838, 943
BmcAI	AGTACT	1 cut(s)	65
Bme1390I	CCNGG	3 cut(s)	427, 725, 808
Bme18I	GGWCC	2 cut(s)	21, 593
BmeRI	GACNNNNNGTC	1 cut(s)	612
BmeT110I	CYCGRG	1 cut(s)	261
BmgBI	CACGTC	1 cut(s)	127
BmgT120I	GGNCC	2 cut(s)	21, 593
BmiI	GGNNCC	2 cut(s)	22, 896
BmrFI	CCNGG	3 cut(s)	427, 725, 808
BmsI	GCATC	4 cut(s)	28, 581, 610, 928
BpiI	GAAGAC	1 cut(s)	611
BplI	GAGNNNNNCTC	2 cut(s)	388, 420
Bpu10I	CCTNAGC	1 cut(s)	102
BpuEI	CTTGAG	1 cut(s)	311
BpuMI	CCSGG	1 cut(s)	808
BsaI	GGTCTC	2 cut(s)	329, 797
BsaJI	CCNNGG	4 cut(s)	16, 24, 303, 882
BsaXI	ACNNNNNCTCC	2 cut(s)	527, 557
Bsc4I	CCNNNNNNNGG	3 cut(s)	554, 749, 851
Bse1I	ACTGG	3 cut(s)	116, 825, 896
BseBI	CCWGG	2 cut(s)	427, 725
BseDI	CCNNGG	4 cut(s)	16, 24, 303, 882
BseGI	GGATG	1 cut(s)	588
BseLI	CCNNNNNNNGG	3 cut(s)	554, 749, 851
BseMII	CTCAG	2 cut(s)	386, 789
BseNI	ACTGG	3 cut(s)	116, 825, 896
BseRI	GAGGAG	1 cut(s)	815
BseXI	GCAGC	9 cut(s)	85, 121, 184, 295, 451, 581, 649, 823, 953
BseYI	CCCAGC	1 cut(s)	119
BsgI	GTGCAG	2 cut(s)	429, 822
BshFI	GGCC	2 cut(s)	671, 881
BshNI	GGYRCC	1 cut(s)	894
BsiHKCI	CYCGRG	1 cut(s)	261
BsiSI	CCGG	1 cut(s)	808
BslFI	GGGAC	3 cut(s)	34, 137, 531
BslI	CCNNNNNNNGG	3 cut(s)	554, 749, 851
BsmAI	GTCTC	2 cut(s)	329, 797
BsmFI	GGGAC	3 cut(s)	34, 137, 531
BsmI	GAATGC	1 cut(s)	136
BsnI	GGCC	2 cut(s)	671, 881
Bso31I	GGTCTC	2 cut(s)	329, 797
BsoBI	CYCGRG	1 cut(s)	261
Bsp143I	GATC	2 cut(s)	144, 646
Bsp19I	CCATGG	1 cut(s)	16
BspANI	GGCC	2 cut(s)	671, 881
BspCNI	CTCAG	2 cut(s)	387, 790
BspHI	TCATGA	1 cut(s)	223
BspLI	GGNNCC	2 cut(s)	22, 896
BspPI	GGATC	2 cut(s)	139, 641
BspT107I	GGYRCC	1 cut(s)	894
BspTNI	GGTCTC	2 cut(s)	329, 797
BsrI	ACTGG	3 cut(s)	116, 825, 896
BssECI	CCNNGG	4 cut(s)	16, 24, 303, 882
BssMI	GATC	2 cut(s)	144, 646
BssSI	CACGAG	1 cut(s)	405
BssT1I	CCWWGG	3 cut(s)	16, 24, 303
Bst2BI	CACGAG	1 cut(s)	405
Bst2UI	CCWGG	2 cut(s)	427, 725
Bst4CI	ACNGT	2 cut(s)	456, 963
Bst6I	CTCTTC	2 cut(s)	372, 377
BstC8I	GCNNGC	3 cut(s)	117, 195, 462
BstDEI	CTNAG	5 cut(s)	102, 395, 482, 714, 798
BstDSI	CCRYGG	2 cut(s)	16, 882
BstF5I	GGATG	1 cut(s)	588
BstKTI	GATC	2 cut(s)	147, 649
BstMAI	GTCTC	2 cut(s)	329, 797
BstMBI	GATC	2 cut(s)	144, 646
BstMWI	GCNNNNNNNGC	4 cut(s)	308, 473, 668, 947
BstNI	CCWGG	2 cut(s)	427, 725
BstNSI	RCATGY	1 cut(s)	740
BstSCI	CCNGG	3 cut(s)	425, 723, 806
BstV1I	GCAGC	9 cut(s)	85, 121, 184, 295, 451, 581, 649, 823, 953
BstV2I	GAAGAC	1 cut(s)	611
BstX2I	RGATCY	1 cut(s)	646
BstYI	RGATCY	1 cut(s)	646
BsuRI	GGCC	2 cut(s)	671, 881
BtgI	CCRYGG	2 cut(s)	16, 882
BtrI	CACGTC	1 cut(s)	127
BtsCI	GGATG	1 cut(s)	588
BtsI	GCAGTG	1 cut(s)	63
BtsIMutI	CAGTG	1 cut(s)	63
Cac8I	GCNNGC	3 cut(s)	117, 195, 462
CciI	TCATGA	1 cut(s)	223
Cfr13I	GGNCC	2 cut(s)	21, 593
Csp6I	GTAC	3 cut(s)	64, 587, 818
CspCI	CAANNNNNGTGG	4 cut(s)	616, 651, 864, 899
CviAII	CATG	7 cut(s)	17, 224, 488, 653, 686, 737, 851
CviQI	GTAC	3 cut(s)	64, 587, 818
DdeI	CTNAG	5 cut(s)	102, 395, 482, 714, 798
DpnI	GATC	2 cut(s)	146, 648
DpnII	GATC	2 cut(s)	144, 646
DriI	GACNNNNNGTC	1 cut(s)	612
EaeI	YGGCCR	1 cut(s)	669
Eam1104I	CTCTTC	2 cut(s)	372, 377
Eam1105I	GACNNNNNGTC	1 cut(s)	612
EarI	CTCTTC	2 cut(s)	372, 377
Eco130I	CCWWGG	3 cut(s)	16, 24, 303
Eco31I	GGTCTC	2 cut(s)	329, 797
Eco47I	GGWCC	2 cut(s)	21, 593
Eco57I	CTGAAG	2 cut(s)	201, 770
Eco88I	CYCGRG	1 cut(s)	261
EcoRI	GAATTC	1 cut(s)	80
EcoRII	CCWGG	2 cut(s)	425, 723
EcoT14I	CCWWGG	3 cut(s)	16, 24, 303
ErhI	CCWWGG	3 cut(s)	16, 24, 303
FaeI	CATG	7 cut(s)	20, 227, 491, 656, 689, 740, 854
FaqI	GGGAC	3 cut(s)	34, 137, 531
FatI	CATG	7 cut(s)	16, 223, 487, 652, 685, 736, 850
Fnu4HI	GCNGC	9 cut(s)	99, 135, 198, 309, 465, 570, 663, 837, 942
FokI	GGATG	1 cut(s)	595
Fsp4HI	GCNGC	9 cut(s)	99, 135, 198, 309, 465, 570, 663, 837, 942
FspBI	CTAG	5 cut(s)	240, 272, 365, 617, 708
GluI	GCNGC	9 cut(s)	99, 135, 198, 309, 465, 570, 663, 837, 942
GsaI	CCCAGC	1 cut(s)	123
HaeIII	GGCC	2 cut(s)	671, 881
HapII	CCGG	1 cut(s)	808
Hin1II	CATG	7 cut(s)	20, 227, 491, 656, 689, 740, 854
HindIII	AAGCTT	1 cut(s)	156
HinfI	GANTC	3 cut(s)	29, 247, 317
HpaII	CCGG	1 cut(s)	808
HphI	GGTGA	1 cut(s)	866
Hpy188I	TCNGA	3 cut(s)	181, 396, 789
Hpy188III	TCNNGA	8 cut(s)	35, 224, 251, 374, 449, 617, 760, 916
HpyAV	CCTTC	3 cut(s)	179, 805, 925
HpyCH4III	ACNGT	2 cut(s)	456, 963
HpyCH4IV	ACGT	2 cut(s)	126, 816
HpyCH4V	TGCA	5 cut(s)	200, 410, 532, 839, 941
HpyF10VI	GCNNNNNNNGC	4 cut(s)	308, 473, 668, 947
HpyF3I	CTNAG	5 cut(s)	102, 395, 482, 714, 798
HpySE526I	ACGT	2 cut(s)	126, 816
Hsp92II	CATG	7 cut(s)	20, 227, 491, 656, 689, 740, 854
Kzo9I	GATC	2 cut(s)	144, 646
LmnI	GCTCC	1 cut(s)	535
Lsp1109I	GCAGC	9 cut(s)	85, 121, 184, 295, 451, 581, 649, 823, 953
LweI	GCATC	4 cut(s)	28, 581, 610, 928
MaeI	CTAG	5 cut(s)	240, 272, 365, 617, 708
MaeII	ACGT	2 cut(s)	126, 816
MaeIII	GTNAC	1 cut(s)	730
MalI	GATC	2 cut(s)	146, 648
MboI	GATC	2 cut(s)	144, 646
MfeI	CAATTG	1 cut(s)	340
MflI	RGATCY	1 cut(s)	646
MlsI	TGGCCA	1 cut(s)	671
MluCI	AATT	4 cut(s)	80, 175, 186, 340
MluNI	TGGCCA	1 cut(s)	671
MnlI	CCTC	6 cut(s)	268, 293, 378, 492, 606, 793
Mox20I	TGGCCA	1 cut(s)	671
MscI	TGGCCA	1 cut(s)	671
MseI	TTAA	2 cut(s)	204, 657
MslI	CAYNNNNRTG	1 cut(s)	657
Msp20I	TGGCCA	1 cut(s)	671
MspI	CCGG	1 cut(s)	808
MspR9I	CCNGG	3 cut(s)	427, 725, 808
MunI	CAATTG	1 cut(s)	340
Mva1269I	GAATGC	1 cut(s)	136
MvaI	CCWGG	2 cut(s)	427, 725
MwoI	GCNNNNNNNGC	4 cut(s)	308, 473, 668, 947
NciI	CCSGG	1 cut(s)	808
NcoI	CCATGG	1 cut(s)	16
NdeII	GATC	2 cut(s)	144, 646
NlaIII	CATG	7 cut(s)	20, 227, 491, 656, 689, 740, 854
NlaIV	GGNNCC	2 cut(s)	22, 896
NspI	RCATGY	1 cut(s)	740
PaeR7I	CTCGAG	1 cut(s)	261
PagI	TCATGA	1 cut(s)	223
PctI	GAATGC	1 cut(s)	136
PfeI	GAWTC	3 cut(s)	29, 247, 317
PflMI	CCANNNNNTGG	2 cut(s)	749, 851
PkrI	GCNGC	9 cut(s)	100, 136, 199, 310, 466, 571, 664, 838, 943
Psp6I	CCWGG	2 cut(s)	425, 723
PspFI	CCCAGC	1 cut(s)	119
PspGI	CCWGG	2 cut(s)	425, 723
PspN4I	GGNNCC	2 cut(s)	22, 896
PspPI	GGNCC	2 cut(s)	21, 593
PspXI	VCTCGAGB	1 cut(s)	261
PsuI	RGATCY	1 cut(s)	646
RsaI	GTAC	3 cut(s)	65, 588, 819
RsaNI	GTAC	3 cut(s)	64, 587, 818
RseI	CAYNNNNRTG	1 cut(s)	657
SaqAI	TTAA	2 cut(s)	204, 657
SatI	GCNGC	9 cut(s)	99, 135, 198, 309, 465, 570, 663, 837, 942
Sau3AI	GATC	2 cut(s)	144, 646
Sau96I	GGNCC	2 cut(s)	21, 593
ScaI	AGTACT	1 cut(s)	65
ScrFI	CCNGG	3 cut(s)	427, 725, 808
SfaNI	GCATC	4 cut(s)	28, 581, 610, 928
Sfr274I	CTCGAG	1 cut(s)	261
SinI	GGWCC	2 cut(s)	21, 593
SlaI	CTCGAG	1 cut(s)	261
SmiMI	CAYNNNNRTG	1 cut(s)	657
SmlI	CTYRAG	2 cut(s)	261, 326
SmoI	CTYRAG	2 cut(s)	261, 326
Sse9I	AATT	4 cut(s)	80, 175, 186, 340
SspI	AATATT	1 cut(s)	632
SspMI	CTAG	5 cut(s)	240, 272, 365, 617, 708
StyD4I	CCNGG	3 cut(s)	425, 723, 806
StyI	CCWWGG	3 cut(s)	16, 24, 303
TaaI	ACNGT	2 cut(s)	456, 963
TaiI	ACGT	2 cut(s)	129, 819
TaqI	TCGA	2 cut(s)	262, 472
TasI	AATT	4 cut(s)	80, 175, 186, 340
TatI	WGTACW	1 cut(s)	63
TfiI	GAWTC	3 cut(s)	29, 247, 317
Tru1I	TTAA	2 cut(s)	204, 657
Tru9I	TTAA	2 cut(s)	204, 657
TscAI	CASTG	1 cut(s)	63
TseI	GCWGC	9 cut(s)	98, 134, 197, 308, 464, 569, 662, 836, 941
TspDTI	ATGAA	2 cut(s)	330, 702
TspRI	CASTG	1 cut(s)	63
Van91I	CCANNNNNTGG	2 cut(s)	749, 851
VpaK11BI	GGWCC	2 cut(s)	21, 593
XapI	RAATTY	1 cut(s)	80
XbaI	TCTAGA	1 cut(s)	616
XceI	RCATGY	1 cut(s)	740
XhoI	CTCGAG	1 cut(s)	261
XspI	CTAG	5 cut(s)	240, 272, 365, 617, 708
ZrmI	AGTACT	1 cut(s)	65

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.