Homeodomain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PLATZ | PF04640 | 82 - 150 | 4.7e-12 | PLATZ transcription factor |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 318, 341 |
| AccB1I | GGYRCC | 1 cut(s) | 476 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 334, 503 |
| AccI | GTMKAC | 1 cut(s) | 461 |
| AciI | CCGC | 4 cut(s) | 212, 359, 399, 544 |
| AcsI | RAATTY | 6 cut(s) | 14, 20, 199, 237, 306, 380 |
| AcuI | CTGAAG | 1 cut(s) | 578 |
| AfaI | GTAC | 4 cut(s) | 158, 422, 428, 620 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 334, 365, 445, 503, 528 |
| AflIII | ACRYGT | 1 cut(s) | 247 |
| AgsI | TTSAA | 5 cut(s) | 19, 39, 151, 349, 572 |
| AluBI | AGCT | 4 cut(s) | 105, 125, 491, 600 |
| AluI | AGCT | 4 cut(s) | 105, 125, 491, 600 |
| Alw21I | GWGCWC | 1 cut(s) | 602 |
| Alw26I | GTCTC | 2 cut(s) | 221, 357 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 159 |
| Ama87I | CYCGRG | 2 cut(s) | 178, 557 |
| AoxI | GGCC | 1 cut(s) | 205 |
| ApeKI | GCWGC | 3 cut(s) | 122, 432, 452 |
| ApoI | RAATTY | 6 cut(s) | 14, 20, 199, 237, 306, 380 |
| AsuHPI | GGTGA | 1 cut(s) | 157 |
| AvaI | CYCGRG | 2 cut(s) | 178, 557 |
| BanI | GGYRCC | 1 cut(s) | 476 |
| BanII | GRGCYC | 1 cut(s) | 602 |
| Bbv12I | GWGCWC | 1 cut(s) | 602 |
| BbvI | GCAGC | 3 cut(s) | 134, 419, 464 |
| BccI | CCATC | 2 cut(s) | 72, 216 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 441, 475 |
| BcoDI | GTCTC | 2 cut(s) | 221, 357 |
| BfmI | CTRYAG | 1 cut(s) | 298 |
| BisI | GCNGC | 4 cut(s) | 123, 400, 433, 453 |
| BlsI | GCNGC | 4 cut(s) | 124, 401, 434, 454 |
| BmcAI | AGTACT | 1 cut(s) | 422 |
| BmeT110I | CYCGRG | 2 cut(s) | 178, 557 |
| BmiI | GGNNCC | 1 cut(s) | 478 |
| BmrI | ACTGGG | 1 cut(s) | 412 |
| BmuI | ACTGGG | 1 cut(s) | 412 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 334, 365, 445, 503, 528 |
| Bse1I | ACTGG | 1 cut(s) | 418 |
| Bse3DI | GCAATG | 2 cut(s) | 439, 462 |
| BseGI | GGATG | 2 cut(s) | 127, 208 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 334, 365, 445, 503, 528 |
| BseMI | GCAATG | 2 cut(s) | 439, 462 |
| BseMII | CTCAG | 1 cut(s) | 44 |
| BseNI | ACTGG | 1 cut(s) | 418 |
| BseRI | GAGGAG | 1 cut(s) | 483 |
| BseXI | GCAGC | 3 cut(s) | 134, 419, 464 |
| BsgI | GTGCAG | 1 cut(s) | 141 |
| BshFI | GGCC | 1 cut(s) | 207 |
| BshNI | GGYRCC | 1 cut(s) | 476 |
| BsiHKAI | GWGCWC | 1 cut(s) | 602 |
| BsiHKCI | CYCGRG | 2 cut(s) | 178, 557 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 334, 365, 445, 503, 528 |
| BsmAI | GTCTC | 2 cut(s) | 221, 357 |
| BsnI | GGCC | 1 cut(s) | 207 |
| BsoBI | CYCGRG | 2 cut(s) | 178, 557 |
| Bsp1286I | GDGCHC | 1 cut(s) | 602 |
| Bsp143I | GATC | 1 cut(s) | 220 |
| BspACI | CCGC | 4 cut(s) | 212, 359, 399, 544 |
| BspANI | GGCC | 1 cut(s) | 207 |
| BspCNI | CTCAG | 1 cut(s) | 43 |
| BspHI | TCATGA | 1 cut(s) | 223 |
| BspLI | GGNNCC | 1 cut(s) | 478 |
| BspMAI | CTGCAG | 1 cut(s) | 302 |
| BspT107I | GGYRCC | 1 cut(s) | 476 |
| BsrDI | GCAATG | 2 cut(s) | 439, 462 |
| BsrI | ACTGG | 1 cut(s) | 418 |
| BssMI | GATC | 1 cut(s) | 220 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 310 |
| BstC8I | GCNNGC | 2 cut(s) | 103, 302 |
| BstDEI | CTNAG | 1 cut(s) | 30 |
| BstF5I | GGATG | 2 cut(s) | 127, 208 |
| BstKTI | GATC | 1 cut(s) | 223 |
| BstMAI | GTCTC | 2 cut(s) | 221, 357 |
| BstMBI | GATC | 1 cut(s) | 220 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 310, 396, 441 |
| BstNSI | RCATGY | 1 cut(s) | 251 |
| BstSFI | CTRYAG | 1 cut(s) | 298 |
| BstV1I | GCAGC | 3 cut(s) | 134, 419, 464 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 215 |
| BsuRI | GGCC | 1 cut(s) | 207 |
| BtsCI | GGATG | 2 cut(s) | 127, 208 |
| Cac8I | GCNNGC | 2 cut(s) | 103, 302 |
| CaiI | CAGNNNCTG | 1 cut(s) | 159 |
| CciI | TCATGA | 1 cut(s) | 223 |
| CseI | GACGC | 1 cut(s) | 151 |
| Csp6I | GTAC | 4 cut(s) | 157, 421, 427, 619 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 454, 489 |
| CviAII | CATG | 4 cut(s) | 196, 224, 248, 630 |
| CviJI | RGCY | 8 cut(s) | 11, 105, 117, 125, 207, 327, 491, 600 |
| CviKI_1 | RGCY | 8 cut(s) | 11, 105, 117, 125, 207, 327, 491, 600 |
| CviQI | GTAC | 4 cut(s) | 157, 421, 427, 619 |
| DdeI | CTNAG | 1 cut(s) | 30 |
| DpnI | GATC | 1 cut(s) | 222 |
| DpnII | GATC | 1 cut(s) | 220 |
| DraI | TTTAAA | 1 cut(s) | 96 |
| Ecl136II | GAGCTC | 1 cut(s) | 600 |
| Eco24I | GRGCYC | 1 cut(s) | 602 |
| Eco53kI | GAGCTC | 1 cut(s) | 600 |
| Eco57I | CTGAAG | 1 cut(s) | 578 |
| Eco88I | CYCGRG | 2 cut(s) | 178, 557 |
| EcoICRI | GAGCTC | 1 cut(s) | 600 |
| EcoRI | GAATTC | 1 cut(s) | 199 |
| EcoT38I | GRGCYC | 1 cut(s) | 602 |
| FaeI | CATG | 4 cut(s) | 199, 227, 251, 633 |
| FatI | CATG | 4 cut(s) | 195, 223, 247, 629 |
| FauI | CCCGC | 2 cut(s) | 366, 537 |
| FblI | GTMKAC | 1 cut(s) | 461 |
| Fnu4HI | GCNGC | 4 cut(s) | 123, 400, 433, 453 |
| FokI | GGATG | 2 cut(s) | 114, 195 |
| FriOI | GRGCYC | 1 cut(s) | 602 |
| Fsp4HI | GCNGC | 4 cut(s) | 123, 400, 433, 453 |
| GluI | GCNGC | 4 cut(s) | 123, 400, 433, 453 |
| HaeIII | GGCC | 1 cut(s) | 207 |
| HgaI | GACGC | 1 cut(s) | 151 |
| Hin1II | CATG | 4 cut(s) | 199, 227, 251, 633 |
| HincII | GTYRAC | 1 cut(s) | 462 |
| HindII | GTYRAC | 1 cut(s) | 462 |
| HindIII | AAGCTT | 1 cut(s) | 103 |
| HinfI | GANTC | 2 cut(s) | 28, 35 |
| HphI | GGTGA | 1 cut(s) | 157 |
| Hpy166II | GTNNAC | 1 cut(s) | 462 |
| Hpy188I | TCNGA | 2 cut(s) | 277, 597 |
| Hpy188III | TCNNGA | 2 cut(s) | 32, 224 |
| Hpy8I | GTNNAC | 1 cut(s) | 462 |
| HpyAV | CCTTC | 2 cut(s) | 602, 607 |
| HpyCH4V | TGCA | 4 cut(s) | 122, 195, 300, 444 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 310, 396, 441 |
| HpyF3I | CTNAG | 1 cut(s) | 30 |
| Hsp92II | CATG | 4 cut(s) | 199, 227, 251, 633 |
| Kzo9I | GATC | 1 cut(s) | 220 |
| LmnI | GCTCC | 2 cut(s) | 496, 605 |
| Lsp1109I | GCAGC | 3 cut(s) | 134, 419, 464 |
| MaeIII | GTNAC | 2 cut(s) | 163, 185 |
| MalI | GATC | 1 cut(s) | 222 |
| MboI | GATC | 1 cut(s) | 220 |
| MhlI | GDGCHC | 1 cut(s) | 602 |
| MluCI | AATT | 6 cut(s) | 14, 20, 199, 237, 306, 380 |
| MlyI | GAGTC | 1 cut(s) | 22 |
| MnlI | CCTC | 4 cut(s) | 79, 446, 490, 504 |
| MseI | TTAA | 3 cut(s) | 95, 233, 374 |
| MslI | CAYNNNNRTG | 2 cut(s) | 366, 608 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 310, 396, 441 |
| NdeII | GATC | 1 cut(s) | 220 |
| NlaIII | CATG | 4 cut(s) | 199, 227, 251, 633 |
| NlaIV | GGNNCC | 1 cut(s) | 478 |
| NmuCI | GTSAC | 2 cut(s) | 163, 185 |
| NspI | RCATGY | 1 cut(s) | 251 |
| PagI | TCATGA | 1 cut(s) | 223 |
| PciI | ACATGT | 1 cut(s) | 247 |
| PfeI | GAWTC | 1 cut(s) | 35 |
| PflFI | GACNNNGTC | 1 cut(s) | 466 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 334, 503 |
| PkrI | GCNGC | 4 cut(s) | 124, 401, 434, 454 |
| PleI | GAGTC | 1 cut(s) | 22 |
| PpsI | GAGTC | 1 cut(s) | 22 |
| PscI | ACATGT | 1 cut(s) | 247 |
| PsiI | TTATAA | 2 cut(s) | 318, 341 |
| Psp124BI | GAGCTC | 1 cut(s) | 602 |
| PspN4I | GGNNCC | 1 cut(s) | 478 |
| PstI | CTGCAG | 1 cut(s) | 302 |
| PstNI | CAGNNNCTG | 1 cut(s) | 159 |
| PsyI | GACNNNGTC | 1 cut(s) | 466 |
| RsaI | GTAC | 4 cut(s) | 158, 422, 428, 620 |
| RsaNI | GTAC | 4 cut(s) | 157, 421, 427, 619 |
| RseI | CAYNNNNRTG | 2 cut(s) | 366, 608 |
| SacI | GAGCTC | 1 cut(s) | 602 |
| SalI | GTCGAC | 1 cut(s) | 460 |
| SaqAI | TTAA | 3 cut(s) | 95, 233, 374 |
| SatI | GCNGC | 4 cut(s) | 123, 400, 433, 453 |
| Sau3AI | GATC | 1 cut(s) | 220 |
| ScaI | AGTACT | 1 cut(s) | 422 |
| SchI | GAGTC | 1 cut(s) | 22 |
| SduI | GDGCHC | 1 cut(s) | 602 |
| SetI | ASST | 9 cut(s) | 107, 127, 158, 170, 450, 493, 580, 602, 624 |
| SfcI | CTRYAG | 1 cut(s) | 298 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 366, 608 |
| Sse9I | AATT | 6 cut(s) | 14, 20, 199, 237, 306, 380 |
| SsiI | CCGC | 4 cut(s) | 212, 359, 399, 544 |
| SstI | GAGCTC | 1 cut(s) | 602 |
| TaqI | TCGA | 2 cut(s) | 7, 461 |
| TasI | AATT | 6 cut(s) | 14, 20, 199, 237, 306, 380 |
| TatI | WGTACW | 1 cut(s) | 420 |
| TauI | GCSGC | 1 cut(s) | 402 |
| TfiI | GAWTC | 1 cut(s) | 35 |
| Tru1I | TTAA | 3 cut(s) | 95, 233, 374 |
| Tru9I | TTAA | 3 cut(s) | 95, 233, 374 |
| TseFI | GTSAC | 2 cut(s) | 163, 185 |
| TseI | GCWGC | 3 cut(s) | 122, 432, 452 |
| Tsp45I | GTSAC | 2 cut(s) | 163, 185 |
| TspDTI | ATGAA | 2 cut(s) | 212, 626 |
| Tth111I | GACNNNGTC | 1 cut(s) | 466 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 334, 503 |
| XapI | RAATTY | 6 cut(s) | 14, 20, 199, 237, 306, 380 |
| XceI | RCATGY | 1 cut(s) | 251 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 331 |
| XmiI | GTMKAC | 1 cut(s) | 461 |
| ZrmI | AGTACT | 1 cut(s) | 422 |