FvH4_6g39520

Belongs to the DHHC palmitoyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0010928
Physical Location & Seq
Forward (+)
31217529 .. 31224244
6716 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g39520.t1

Sequence Viewer

Length: 2241 bp
ATGGTGAGGAAGCATGGATGGCAATTGCCTGCTCACACCTTTCAGGTTGTCGCAATTACTGTATTTTGCTTGTTAGTGGTCGCATTCTATGCTTTCTTTGCTCCTTTCCTTGGAGGCCGCATCTGGGAATATGTTCTGATTGGAAGTTACTCTCCGGTGGCACTTCTTGTCTTTATTCTCTATGTACGATGTACTGCAATAAACCCTGCAGATCCTGGAATCATGTCCAGGTTTTACAATGGGGCAATCAATAATTTTAATGCACATCATGGGATATCAGCAAAAGACCTGCCAAGAAAATTTGATGACGGTGCAACTGGGGCCTCCTCACCATCATCAGTTTCCAAAAGTTCAATAGCAGGAGCTAACTCTAGTAGGAAAGGCTCAGTAGGAGAACTAGGAGGTGTAAATTATCCAGCAGAACCAACAGCCAGTAGTGTTGGAGGAGTGGGTATCTTATGTGCCTTGTTTGTACATCAAGATTGCCGCAAACAACAGGAAGGGGCAGCAGAGCATCAGGGTGGTGAAGGTGGTGAAGAGGCTTTGTTCTGTACATTGTGCAATTCTGAGGTTCGCAAGTTCAGCAAACACTGTAGAAGTTGTGATAAGTGTGTTGACGGTTTTGATCACCACTGTCGGTGGCTTAACAATTGTGTGGGGCACAAAAATTATGTGACTTTTATCAGCCTGATGGCCATCAGTCTTCTTTGGCTTGCCATTGAAGCTGGAGTTGGTATTGCTGTACTAGTGCGCTGCTTTGTTAACAAGAGAAGCATGGAGGCAGAAATTATTGATAGACTTGGAAATGGTTTCACTAGAGCGCCATTTGCAACAGTTGTGGCTATTTGTACTGCAGTTTCTGTTCTGGCATGTGTACCCCTCAGTGAACTGTTTTTCTTCCACATGATATTAATCAGGAAGGGTATTACTACCTACGAATATGTTGTGGCAATGAGAGCAATGAGTGAGGTACCCGGAGGAGACGTGGATGAGGCTATCAATAATATCATGTACTCACCAACTGGATCAGCTACAACTGGCTTGAGTGGTGGAAGTTCTTTAGGTCTGCAATACAAGGGTGCATGGTGTACACCTCCAAGAGTCTTTGTGGATTATCAGGATGAAGTTGTACCACATTTGGAGCCTGGAATGGTCCCATCAACTATTGATCCAGATGCCGCTGGAACTACAGAAAGAGAGCACAAAGCTCCTAAAAGGCCTGTTCGTATTAGTGCTTGGAAGCTTGCAAAGCTAGACTCTAGTGAGGCCATGAGAGCAGCGGCGAAAGCCAGGGCTTCATCCTCAGTTCTACGACCACTTGATAAACCTGATCATGAGCGTAGCTCAAGTGGCAATATGAGTGTGAGGAGTAGTGTAAGCACTGATACAGGGACAAATAGAGAGATGAAGAATGATCTGAGGTTGTCAAGAAACTCTTATGCGCCAAGTCAAGGTAGCCGAGACGAGTATGAAACTGGAACTCAAAGCATAAGTAGCTTCAGCAGTCCAAGCCATATTCATGAAGCGGTCACACTTAGCCCTCTACCACAGGGTCAAGGTCTCGGTCCTCTGGGACGTTTCAGTGCAGCCACTTCAGTTCCCAGCTTAGTTCCTGAACGTCCATTACCTCCCAGGACATCATTCCCCAATGTCAGTCAGACAATGTCACAGCCCTTGGGATTTGATGAAAAGATAATACAGAAGTGTAGCACTGATCCTTTGATGCTTTCTGGTCCACCTACTTCTCTTCTCAGAGATGTTAGAAGGACATCAGTTGTTTGGGACCAAGAAGCCGGAAGATATGTGTCAGTTCCTGTATCAGCTTCTGAAGCTCGAAACAACAGGTTATCTGTTCCAGGATTATCAAATCCCAATGCAGAAACAAGCAATTATAGTAGAAGGCCAGTTATTCCGCCACAGGAGGCTTCATCTTCCGCAGCGAAGCCTCCAGTGCAACATACAGAGAAACTGATGTATACGGGAGACTCCATATTCTTTGGTGGTCCACTTTTAAGTGCACCAGTTAGGGATAATATGAGAAATGAAAGGGGTCCGGGTTCAAGAGAGGGCCAAGACAGGACAGCACTGAACTTGCCTAGGGAGTCTAGATTCAGACGTGATTCTGCGTCAAACCAGCTTCCTGTGTTTGTCCCAGGGGGATTTGAGCAAAACCCTTCTTTTGGGTCCGGGCACAGTGGAGGAGTAGGCAAGTTTGAAACCGCCGATGAGAGCTACAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DHHC

Protein Analysis

747

Amino Acids

80.48

Weight (kDa)

8.38

Isoelectric Point (pI)

53.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DHHC PF01529 180 - 315 9e-32 DHHC palmitoyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0010928)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G15080 AT4G15080
fragaria_vesca FvH4_6g39520 FvH4_6g39520 FvH4_6g39520
malus_domestica MD09G1139400.v1.1 MD17G1128900.v1.1
prunus_persica Prupe.3G186400_v2.0.a1
pyrus_communis pycom09g06000 pycom17g12090
rosa_chinensis RchiOBHm_Chr2g0153581
rosa_laevigata RLG00000020712
rosa_multiflora Rmu_ssc0000024.1_g000020
rosa_roxburghii Rroxscaffold_2G00094900
rosa_rugosa Rorug02G0440700
rosa_samantha Rh2AG503500 Rh2BG514200 Rh2CG489300 Rh2DG525900
rosa_wichuraiana Rw2G041350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 297
Acc65I GGTACC 1 cut(s) 970
AccB1I GGYRCC 1 cut(s) 970
AccI GTMKAC 1 cut(s) 1976
AciI CCGC 8 cut(s) 118, 487, 1179, 1280, 1526, 1913, 1935, 2220
AclWI GGATC 4 cut(s) 206, 1033, 1163, 1709
AcoI YGGCCR 1 cut(s) 693
AcsI RAATTY 1 cut(s) 299
AcuI CTGAAG 3 cut(s) 1483, 1578, 1848
AfiI CCNNNNNNNGG 4 cut(s) 110, 124, 1451, 2180
AgsI TTSAA 4 cut(s) 354, 722, 2061, 2216
AhlI ACTAGT 1 cut(s) 745
AjiI CACGTC 2 cut(s) 985, 2117
AjnI CCWGG 7 cut(s) 214, 227, 1144, 1289, 1631, 1855, 2152
AjuI GAANNNNNNNTTGG 2 cut(s) 714, 746
Alw21I GWGCWC 2 cut(s) 1203, 2020
Alw26I GTCTC 4 cut(s) 975, 1455, 1565, 1977
Alw44I GTGCAC 1 cut(s) 2016
AlwI GGATC 4 cut(s) 206, 1033, 1163, 1709
AlwNI CAGNNNCTG 4 cut(s) 215, 860, 1814, 1826
AoxI GGCC 7 cut(s) 115, 321, 693, 1217, 1266, 1901, 2068
ApaLI GTGCAC 1 cut(s) 2016
ApeKI GCWGC 5 cut(s) 506, 753, 1277, 1586, 1937
ApoI RAATTY 1 cut(s) 299
AseI ATTAAT 1 cut(s) 911
Asp700I GAANNNNTTC 1 cut(s) 132
Asp718I GGTACC 1 cut(s) 970
AspA2I CCTAGG 1 cut(s) 2096
AspLEI GCGC 3 cut(s) 753, 823, 1444
AspS9I GGNCC 9 cut(s) 321, 1153, 1565, 1733, 1783, 2003, 2051, 2068, 2184
AsuC2I CCSGG 3 cut(s) 975, 2055, 2188
AsuHPI GGTGA 6 cut(s) 16, 321, 536, 545, 620, 1008
AvaII GGWCC 7 cut(s) 1153, 1565, 1733, 1783, 2003, 2051, 2184
AvrII CCTAGG 1 cut(s) 2096
BaeGI GKGCMC 3 cut(s) 663, 2020, 2193
BalI TGGCCA 1 cut(s) 695
BanI GGYRCC 1 cut(s) 970
BbsI GAAGAC 1 cut(s) 695
Bbv12I GWGCWC 2 cut(s) 1203, 2020
BbvI GCAGC 5 cut(s) 518, 740, 1289, 1598, 1949
BccI CCATC 5 cut(s) 12, 340, 685, 704, 1165
BciT130I CCWGG 7 cut(s) 216, 229, 1146, 1291, 1633, 1857, 2154
BclI TGATCA 2 cut(s) 625, 1330
BcnI CCSGG 3 cut(s) 975, 2055, 2188
BcoDI GTCTC 4 cut(s) 975, 1455, 1565, 1977
BcuI ACTAGT 1 cut(s) 745
BfaI CTAG 8 cut(s) 372, 398, 746, 816, 1253, 1260, 2097, 2106
BfmI CTRYAG 5 cut(s) 207, 592, 852, 1188, 2233
BfoI RGCGCY 1 cut(s) 824
BfuAI ACCTGC 1 cut(s) 297
BisI GCNGC 9 cut(s) 118, 487, 507, 754, 1179, 1278, 1281, 1587, 1938
BlnI CCTAGG 1 cut(s) 2096
BlsI GCNGC 9 cut(s) 119, 488, 508, 755, 1180, 1279, 1282, 1588, 1939
Bme18I GGWCC 7 cut(s) 1153, 1565, 1733, 1783, 2003, 2051, 2184
BmgBI CACGTC 2 cut(s) 985, 2117
BmgT120I GGNCC 9 cut(s) 321, 1153, 1565, 1733, 1783, 2003, 2051, 2068, 2184
BmiI GGNNCC 7 cut(s) 322, 972, 1143, 1155, 1784, 2052, 2185
BmrI ACTGGG 1 cut(s) 327
BmsI GCATC 4 cut(s) 129, 523, 1165, 1713
BmuI ACTGGG 1 cut(s) 327
BpiI GAAGAC 1 cut(s) 695
BplI GAGNNNNNCTC 2 cut(s) 1328, 1360
BpmI CTGGAG 2 cut(s) 747, 1932
BpuEI CTTGAG 2 cut(s) 1063, 1330
BpuMI CCSGG 3 cut(s) 975, 2055, 2188
BsaBI GATNNNNATC 2 cut(s) 695, 911
BsaI GGTCTC 1 cut(s) 1565
BsaJI CCNNGG 7 cut(s) 109, 1290, 1631, 1674, 2096, 2152, 2153
BsaWI WCCGGW 1 cut(s) 154
BsaXI ACNNNNNCTCC 2 cut(s) 969, 999
Bsc4I CCNNNNNNNGG 4 cut(s) 110, 124, 1451, 2180
Bse1I ACTGG 8 cut(s) 322, 432, 1027, 1042, 1480, 1904, 1949, 2021
Bse3DI GCAATG 2 cut(s) 957, 966
Bse8I GATNNNNATC 2 cut(s) 695, 911
BseBI CCWGG 7 cut(s) 216, 229, 1146, 1291, 1633, 1857, 2154
BseDI CCNNGG 7 cut(s) 109, 1290, 1631, 1674, 2096, 2152, 2153
BseGI GGATG 4 cut(s) 23, 994, 1126, 1298
BseJI GATNNNNATC 2 cut(s) 695, 911
BseLI CCNNNNNNNGG 4 cut(s) 110, 124, 1451, 2180
BseMI GCAATG 2 cut(s) 957, 966
BseMII CTCAG 6 cut(s) 399, 558, 895, 1317, 1409, 1765
BseNI ACTGG 8 cut(s) 322, 432, 1027, 1042, 1480, 1904, 1949, 2021
BseRI GAGGAG 5 cut(s) 316, 459, 993, 1381, 2214
BseSI GKGCMC 3 cut(s) 663, 2020, 2193
BseXI GCAGC 5 cut(s) 518, 740, 1289, 1598, 1949
BseYI CCCAGC 1 cut(s) 1601
BsgI GTGCAG 1 cut(s) 1605
BshFI GGCC 7 cut(s) 117, 323, 695, 1219, 1268, 1903, 2070
BshNI GGYRCC 1 cut(s) 970
BsiHKAI GWGCWC 2 cut(s) 1203, 2020
BsiSI CCGG 5 cut(s) 155, 975, 1794, 2054, 2187
BslFI GGGAC 5 cut(s) 1139, 1405, 1587, 1796, 2135
BslI CCNNNNNNNGG 4 cut(s) 110, 124, 1451, 2180
BsmAI GTCTC 4 cut(s) 975, 1455, 1565, 1977
BsmBI CGTCTC 2 cut(s) 975, 1455
BsmFI GGGAC 5 cut(s) 1139, 1405, 1587, 1796, 2135
BsmI GAATGC 1 cut(s) 83
BsnI GGCC 7 cut(s) 117, 323, 695, 1219, 1268, 1903, 2070
Bso31I GGTCTC 1 cut(s) 1565
Bsp1286I GDGCHC 4 cut(s) 663, 1203, 2020, 2193
Bsp1407I TGTACA 3 cut(s) 472, 551, 1088
Bsp143I GATC 7 cut(s) 211, 625, 1025, 1168, 1330, 1414, 1714
BspACI CCGC 8 cut(s) 118, 487, 1179, 1280, 1526, 1913, 1935, 2220
BspANI GGCC 7 cut(s) 117, 323, 695, 1219, 1268, 1903, 2070
BspCNI CTCAG 6 cut(s) 398, 559, 894, 1316, 1410, 1764
BspHI TCATGA 2 cut(s) 1333, 1519
BspLI GGNNCC 7 cut(s) 322, 972, 1143, 1155, 1784, 2052, 2185
BspMAI CTGCAG 2 cut(s) 211, 856
BspMI ACCTGC 1 cut(s) 297
BspPI GGATC 4 cut(s) 206, 1033, 1163, 1709
BspT107I GGYRCC 1 cut(s) 970
BspTNI GGTCTC 1 cut(s) 1565
BsrDI GCAATG 2 cut(s) 957, 966
BsrGI TGTACA 3 cut(s) 472, 551, 1088
BsrI ACTGG 8 cut(s) 322, 432, 1027, 1042, 1480, 1904, 1949, 2021
BssECI CCNNGG 7 cut(s) 109, 1290, 1631, 1674, 2096, 2152, 2153
BssMI GATC 7 cut(s) 211, 625, 1025, 1168, 1330, 1414, 1714
BssNAI GTATAC 1 cut(s) 1977
BssT1I CCWWGG 3 cut(s) 109, 1674, 2096
Bst1107I GTATAC 1 cut(s) 1977
Bst2UI CCWGG 7 cut(s) 216, 229, 1146, 1291, 1633, 1857, 2154
Bst4CI ACNGT 9 cut(s) 61, 311, 593, 620, 635, 835, 891, 2195, 2237
Bst6I CTCTTC 2 cut(s) 531, 1752
BstAPI GCANNNNNTGC 1 cut(s) 89
BstAUI TGTACA 3 cut(s) 472, 551, 1088
BstC8I GCNNGC 3 cut(s) 30, 714, 1245
BstDEI CTNAG 8 cut(s) 385, 567, 881, 1303, 1418, 1535, 1606, 1751
BstF5I GGATG 4 cut(s) 23, 994, 1126, 1298
BstH2I RGCGCY 1 cut(s) 824
BstHHI GCGC 3 cut(s) 753, 823, 1444
BstKTI GATC 7 cut(s) 214, 628, 1028, 1171, 1333, 1417, 1717
BstMAI GTCTC 4 cut(s) 975, 1455, 1565, 1977
BstMBI GATC 7 cut(s) 211, 625, 1025, 1168, 1330, 1414, 1714
BstNI CCWGG 7 cut(s) 216, 229, 1146, 1291, 1633, 1857, 2154
BstNSI RCATGY 1 cut(s) 873
BstSFI CTRYAG 5 cut(s) 207, 592, 852, 1188, 2233
BstSLI GKGCMC 3 cut(s) 663, 2020, 2193
BstV1I GCAGC 5 cut(s) 518, 740, 1289, 1598, 1949
BstV2I GAAGAC 1 cut(s) 695
BstX2I RGATCY 1 cut(s) 211
BstYI RGATCY 1 cut(s) 211
BstZ17I GTATAC 1 cut(s) 1977
BsuRI GGCC 7 cut(s) 117, 323, 695, 1219, 1268, 1903, 2070
BtrI CACGTC 2 cut(s) 985, 2117
BtsCI GGATG 4 cut(s) 23, 994, 1126, 1298
BtsIMutI CAGTG 9 cut(s) 589, 631, 889, 1380, 1588, 1710, 1956, 2084, 2200
BveI ACCTGC 1 cut(s) 297
Cac8I GCNNGC 3 cut(s) 30, 714, 1245
CaiI CAGNNNCTG 4 cut(s) 215, 860, 1814, 1826
CciI TCATGA 2 cut(s) 1333, 1519
CfoI GCGC 3 cut(s) 753, 823, 1444
Cfr13I GGNCC 9 cut(s) 321, 1153, 1565, 1733, 1783, 2003, 2051, 2068, 2184
CseI GACGC 1 cut(s) 2115
CspCI CAANNNNNGTGG 2 cut(s) 819, 854
DdeI CTNAG 8 cut(s) 385, 567, 881, 1303, 1418, 1535, 1606, 1751
DpnI GATC 7 cut(s) 213, 627, 1027, 1170, 1332, 1416, 1716
DpnII GATC 7 cut(s) 211, 625, 1025, 1168, 1330, 1414, 1714
EaeI YGGCCR 1 cut(s) 693
Eam1104I CTCTTC 2 cut(s) 531, 1752
EarI CTCTTC 2 cut(s) 531, 1752
EciI GGCGGA 1 cut(s) 1902
Eco130I CCWWGG 3 cut(s) 109, 1674, 2096
Eco147I AGGCCT 1 cut(s) 1219
Eco31I GGTCTC 1 cut(s) 1565
Eco32I GATATC 1 cut(s) 276
Eco47I GGWCC 7 cut(s) 1153, 1565, 1733, 1783, 2003, 2051, 2184
Eco57I CTGAAG 3 cut(s) 1483, 1578, 1848
EcoO109I RGGNCCY 1 cut(s) 321
EcoRII CCWGG 7 cut(s) 214, 227, 1144, 1289, 1631, 1855, 2152
EcoRV GATATC 1 cut(s) 276
EcoT14I CCWWGG 3 cut(s) 109, 1674, 2096
ErhI CCWWGG 3 cut(s) 109, 1674, 2096
Esp3I CGTCTC 2 cut(s) 975, 1455
FalI AAGNNNNNCTT 2 cut(s) 1420, 1452
FaqI GGGAC 5 cut(s) 1139, 1405, 1587, 1796, 2135
FbaI TGATCA 2 cut(s) 625, 1330
FblI GTMKAC 1 cut(s) 1976
Fnu4HI GCNGC 9 cut(s) 118, 487, 507, 754, 1179, 1278, 1281, 1587, 1938
FokI GGATG 4 cut(s) 30, 1001, 1133, 1285
Fsp4HI GCNGC 9 cut(s) 118, 487, 507, 754, 1179, 1278, 1281, 1587, 1938
FspBI CTAG 8 cut(s) 372, 398, 746, 816, 1253, 1260, 2097, 2106
GlaI GCGC 3 cut(s) 752, 822, 1443
GluI GCNGC 9 cut(s) 118, 487, 507, 754, 1179, 1278, 1281, 1587, 1938
GsaI CCCAGC 1 cut(s) 1605
GsuI CTGGAG 2 cut(s) 747, 1932
HaeII RGCGCY 1 cut(s) 824
HaeIII GGCC 7 cut(s) 117, 323, 695, 1219, 1268, 1903, 2070
HapII CCGG 5 cut(s) 155, 975, 1794, 2054, 2187
HgaI GACGC 1 cut(s) 2115
HhaI GCGC 3 cut(s) 753, 823, 1444
Hin6I GCGC 3 cut(s) 751, 821, 1442
HinP1I GCGC 3 cut(s) 751, 821, 1442
HincII GTYRAC 2 cut(s) 616, 763
HindII GTYRAC 2 cut(s) 616, 763
HindIII AAGCTT 1 cut(s) 1241
HinfI GANTC 7 cut(s) 219, 1101, 1256, 1985, 2102, 2109, 2120
HpaI GTTAAC 1 cut(s) 763
HpaII CCGG 5 cut(s) 155, 975, 1794, 2054, 2187
HphI GGTGA 6 cut(s) 16, 321, 536, 545, 620, 1008
Hpy188I TCNGA 7 cut(s) 138, 568, 1419, 1659, 1754, 1828, 2114
HpyAV CCTTC 6 cut(s) 494, 521, 913, 1758, 1893, 2184
HpyCH4III ACNGT 9 cut(s) 61, 311, 593, 620, 635, 835, 891, 2195, 2237
HpyCH4IV ACGT 4 cut(s) 984, 1576, 1618, 2116
HpyF3I CTNAG 8 cut(s) 385, 567, 881, 1303, 1418, 1535, 1606, 1751
HpySE526I ACGT 4 cut(s) 984, 1576, 1618, 2116
HspAI GCGC 3 cut(s) 751, 821, 1442
KpnI GGTACC 1 cut(s) 974
Ksp22I TGATCA 2 cut(s) 625, 1330
KspAI GTTAAC 1 cut(s) 763
Kzo9I GATC 7 cut(s) 211, 625, 1025, 1168, 1330, 1414, 1714
LmnI GCTCC 4 cut(s) 106, 362, 1141, 1213
Lsp1109I GCAGC 5 cut(s) 518, 740, 1289, 1598, 1949
LweI GCATC 4 cut(s) 129, 523, 1165, 1713
MaeI CTAG 8 cut(s) 372, 398, 746, 816, 1253, 1260, 2097, 2106
MaeII ACGT 4 cut(s) 984, 1576, 1618, 2116
MaeIII GTNAC 4 cut(s) 146, 673, 1528, 1665
MalI GATC 7 cut(s) 213, 627, 1027, 1170, 1332, 1416, 1716
MboI GATC 7 cut(s) 211, 625, 1025, 1168, 1330, 1414, 1714
MboII GAAGA 7 cut(s) 548, 695, 889, 1420, 1739, 1809, 1923
MfeI CAATTG 2 cut(s) 23, 649
MflI RGATCY 1 cut(s) 211
MhlI GDGCHC 4 cut(s) 663, 1203, 2020, 2193
MlsI TGGCCA 1 cut(s) 695
MluNI TGGCCA 1 cut(s) 695
MlyI GAGTC 4 cut(s) 1110, 1250, 1979, 2111
MmeI TCCRAC 1 cut(s) 421
Mox20I TGGCCA 1 cut(s) 695
MroXI GAANNNNTTC 1 cut(s) 132
MscI TGGCCA 1 cut(s) 695
MseI TTAA 5 cut(s) 258, 645, 762, 911, 2012
MslI CAYNNNNRTG 2 cut(s) 519, 1518
Msp20I TGGCCA 1 cut(s) 695
MspA1I CMGCKG 2 cut(s) 1181, 1280
MspI CCGG 5 cut(s) 155, 975, 1794, 2054, 2187
MunI CAATTG 2 cut(s) 23, 649
Mva1269I GAATGC 1 cut(s) 83
MvaI CCWGG 7 cut(s) 216, 229, 1146, 1291, 1633, 1857, 2154
NciI CCSGG 3 cut(s) 975, 2055, 2188
NdeII GATC 7 cut(s) 211, 625, 1025, 1168, 1330, 1414, 1714
NlaIV GGNNCC 7 cut(s) 322, 972, 1143, 1155, 1784, 2052, 2185
NmeAIII GCCGAG 1 cut(s) 1484
NmuCI GTSAC 3 cut(s) 673, 1528, 1665
NspI RCATGY 1 cut(s) 873
PagI TCATGA 2 cut(s) 1333, 1519
PasI CCCWGGG 1 cut(s) 2153
PceI AGGCCT 1 cut(s) 1219
PctI GAATGC 1 cut(s) 83
PdmI GAANNNNTTC 1 cut(s) 132
PfeI GAWTC 3 cut(s) 219, 2109, 2120
PflFI GACNNNGTC 1 cut(s) 1663
PfoI TCCNGGA 2 cut(s) 214, 1855
PkrI GCNGC 9 cut(s) 119, 488, 508, 755, 1180, 1279, 1282, 1588, 1939
PleI GAGTC 4 cut(s) 1109, 1250, 1979, 2110
PpsI GAGTC 4 cut(s) 1109, 1250, 1979, 2110
PshBI ATTAAT 1 cut(s) 911
Psp6I CCWGG 7 cut(s) 214, 227, 1144, 1289, 1631, 1855, 2152
PspFI CCCAGC 1 cut(s) 1601
PspGI CCWGG 7 cut(s) 214, 227, 1144, 1289, 1631, 1855, 2152
PspN4I GGNNCC 7 cut(s) 322, 972, 1143, 1155, 1784, 2052, 2185
PspPI GGNCC 9 cut(s) 321, 1153, 1565, 1733, 1783, 2003, 2051, 2068, 2184
PsrI GAACNNNNNNTAC 2 cut(s) 1608, 1640
PstI CTGCAG 2 cut(s) 211, 856
PstNI CAGNNNCTG 4 cut(s) 215, 860, 1814, 1826
PsuI RGATCY 1 cut(s) 211
PsyI GACNNNGTC 1 cut(s) 1663
RseI CAYNNNNRTG 2 cut(s) 519, 1518
SaqAI TTAA 5 cut(s) 258, 645, 762, 911, 2012
SatI GCNGC 9 cut(s) 118, 487, 507, 754, 1179, 1278, 1281, 1587, 1938
Sau3AI GATC 7 cut(s) 211, 625, 1025, 1168, 1330, 1414, 1714
Sau96I GGNCC 9 cut(s) 321, 1153, 1565, 1733, 1783, 2003, 2051, 2068, 2184
SchI GAGTC 4 cut(s) 1110, 1250, 1979, 2111
SduI GDGCHC 4 cut(s) 663, 1203, 2020, 2193
SfaNI GCATC 4 cut(s) 129, 523, 1165, 1713
SfcI CTRYAG 5 cut(s) 207, 592, 852, 1188, 2233
SinI GGWCC 7 cut(s) 1153, 1565, 1733, 1783, 2003, 2051, 2184
SmiMI CAYNNNNRTG 2 cut(s) 519, 1518
SmlI CTYRAG 2 cut(s) 1042, 1345
SmoI CTYRAG 2 cut(s) 1042, 1345
SpeI ACTAGT 1 cut(s) 745
SseBI AGGCCT 1 cut(s) 1219
SsiI CCGC 8 cut(s) 118, 487, 1179, 1280, 1526, 1913, 1935, 2220
SspMI CTAG 8 cut(s) 372, 398, 746, 816, 1253, 1260, 2097, 2106
StuI AGGCCT 1 cut(s) 1219
StyI CCWWGG 3 cut(s) 109, 1674, 2096
TaaI ACNGT 9 cut(s) 61, 311, 593, 620, 635, 835, 891, 2195, 2237
TaiI ACGT 4 cut(s) 987, 1579, 1621, 2119
TaqI TCGA 1 cut(s) 1834
TaqII GACCGA 1 cut(s) 1553
TatI WGTACW 7 cut(s) 191, 472, 551, 742, 848, 1011, 1088
TauI GCSGC 4 cut(s) 120, 489, 1181, 1283
TfiI GAWTC 3 cut(s) 219, 2109, 2120
Tru1I TTAA 5 cut(s) 258, 645, 762, 911, 2012
Tru9I TTAA 5 cut(s) 258, 645, 762, 911, 2012
TscAI CASTG 9 cut(s) 596, 638, 889, 1387, 1588, 1717, 1956, 2091, 2200
TseFI GTSAC 3 cut(s) 673, 1528, 1665
TseI GCWGC 5 cut(s) 506, 753, 1277, 1586, 1937
Tsp45I GTSAC 3 cut(s) 673, 1528, 1665
TspDTI ATGAA 9 cut(s) 1137, 1287, 1421, 1485, 1508, 1536, 1701, 1917, 2058
TspRI CASTG 9 cut(s) 596, 638, 889, 1387, 1588, 1717, 1956, 2091, 2200
Tth111I GACNNNGTC 1 cut(s) 1663
VneI GTGCAC 1 cut(s) 2016
VpaK11BI GGWCC 7 cut(s) 1153, 1565, 1733, 1783, 2003, 2051, 2184
VspI ATTAAT 1 cut(s) 911
XapI RAATTY 1 cut(s) 299
XbaI TCTAGA 1 cut(s) 2105
XceI RCATGY 1 cut(s) 873
XmaJI CCTAGG 1 cut(s) 2096
XmiI GTMKAC 1 cut(s) 1976
XmnI GAANNNNTTC 1 cut(s) 132
XspI CTAG 8 cut(s) 372, 398, 746, 816, 1253, 1260, 2097, 2106
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.